BLASTX nr result
ID: Sinomenium21_contig00021313
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00021313
(652 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containi... 277 7e-77
ref|XP_006492149.1| PREDICTED: pentatricopeptide repeat-containi... 256 7e-73
ref|XP_006420511.1| hypothetical protein CICLE_v10006965mg, part... 256 4e-71
ref|XP_007221599.1| hypothetical protein PRUPE_ppa026817mg, part... 252 5e-71
ref|XP_002517094.1| pentatricopeptide repeat-containing protein,... 249 1e-70
ref|XP_004298015.1| PREDICTED: pentatricopeptide repeat-containi... 247 3e-70
ref|XP_004986242.1| PREDICTED: pentatricopeptide repeat-containi... 243 3e-67
ref|XP_002314678.2| hypothetical protein POPTR_0010s09410g [Popu... 240 9e-67
gb|EXB51131.1| hypothetical protein L484_009095 [Morus notabilis] 258 1e-66
ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containi... 241 3e-66
ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containi... 241 3e-66
ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containi... 241 2e-65
ref|XP_006839002.1| hypothetical protein AMTR_s00002p00271910 [A... 253 3e-65
ref|XP_007034825.1| Pentatricopeptide repeat superfamily protein... 251 1e-64
ref|XP_004511384.1| PREDICTED: pentatricopeptide repeat-containi... 235 2e-64
ref|NP_001183846.1| hypothetical protein [Zea mays] gi|238014984... 236 2e-63
dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare] 234 3e-63
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 233 5e-63
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 233 5e-63
ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group] g... 233 5e-63
>ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 277 bits (709), Expect(2) = 7e-77
Identities = 132/186 (70%), Positives = 160/186 (86%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDFRKV+S+L EM+EKGCPPNVVTYTIVMH+LGK KE +ALEVYE+MK +SCVPDTSF
Sbjct: 305 EKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSF 364
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
++SLIYI+SKAGRL+DA ++E+M + G+ P+V+TYNTMISAAC HSQE+ ALKLL +ME
Sbjct: 365 YSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKME 424
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E CKPDL TY+PLLK+CCR +KVL LLN M K DISL++GTYSL++HGLCKS +LE
Sbjct: 425 ESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLE 484
Query: 544 QACLFF 561
ACLFF
Sbjct: 485 HACLFF 490
Score = 37.0 bits (84), Expect(2) = 7e-77
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 551 AC-FFEEMVLKGLVPWSSTFNMLVDVLERKNMENA 652
AC FFEEMV KGLVP T +L+ LE+K+M A
Sbjct: 486 ACLFFEEMVSKGLVPKDCTHKLLLKELEKKSMVEA 520
Score = 71.2 bits (173), Expect = 3e-10
Identities = 42/161 (26%), Positives = 76/161 (47%)
Frame = +1
Query: 67 NVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHKIY 246
N T+ +++H KA++ AL+ MK + PD + S++ + + + +
Sbjct: 256 NPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVL 315
Query: 247 EEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICCRK 426
EM G PNV+TY ++ A + + AL++ ++M+ C PD Y+ L+ I +
Sbjct: 316 NEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKA 375
Query: 427 KWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
+K + DM K+ D+ TY+ +I C Q E A
Sbjct: 376 GRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDA 416
Score = 64.3 bits (155), Expect(2) = 2e-08
Identities = 45/169 (26%), Positives = 79/169 (46%)
Frame = +1
Query: 43 MQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGR 222
M+ G + + +M +L K A +V+ K +S + + FN LI+ KA +
Sbjct: 214 MERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFK-DSILLNPHTFNVLIHGWCKARK 272
Query: 223 LQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAP 402
+ +A K EM G P+V++Y +++ A C + +L EMEE+ C P++ TY
Sbjct: 273 MDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTI 332
Query: 403 LLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
++ + K I + M D YS +I+ L K+ +L+ A
Sbjct: 333 VMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDA 381
Score = 20.8 bits (42), Expect(2) = 2e-08
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 560 FEEMVLKGLVPWSSTFNMLV 619
FE+M +G +P T+N ++
Sbjct: 385 FEDMTKQGAIPDVLTYNTMI 404
>ref|XP_006492149.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 546
Score = 256 bits (654), Expect(2) = 7e-73
Identities = 121/186 (65%), Positives = 157/186 (84%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDFRKVD L EMQEKGC P+V+TYTIVMH+LGKAK+ EAL+VYE+MK + C+PDTSF
Sbjct: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
++SLI+I+SKAGR++DA++I+E+M + G PNV+TYNTMIS+AC S+E++ALKLLQ+ME
Sbjct: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E LCKPD +TYAPLLK+CCRKK +KVL +LL M K D+S+D GTY+ ++ GL +S +LE
Sbjct: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
Query: 544 QACLFF 561
AC FF
Sbjct: 494 LACSFF 499
Score = 44.7 bits (104), Expect(2) = 7e-73
Identities = 21/37 (56%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +2
Query: 545 KLAC-FFEEMVLKGLVPWSSTFNMLVDVLERKNMENA 652
+LAC FFEEM+ KG+VP+ ST+ ML + LE+K + NA
Sbjct: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNA 529
Score = 71.2 bits (173), Expect(2) = 3e-11
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = +1
Query: 43 MQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTS-FFNSLIYIVSKAG 219
M++ G + +++M +L K A +V+ K C+P +S FN LI+ K
Sbjct: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
Query: 220 RLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYA 399
++ DA K +EM + G SP+V++Y I C + L+EM+E+ CKP + TY
Sbjct: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
Query: 400 PLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
++ + K I + M D D YS +I L K+ +++ A
Sbjct: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
Score = 23.5 bits (49), Expect(2) = 3e-11
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 527 RVNN*NKLACFFEEMVLKGLVPWSSTFN-MLVDVLERKNMENA 652
RV + N++ FE+M +G+VP T+N M+ R ENA
Sbjct: 386 RVKDANEI---FEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
Score = 64.3 bits (155), Expect = 3e-08
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Frame = +1
Query: 67 NVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHKIY 246
++VT + +M L + +A EV+ MK+ DT + L+ + K ++ A+K++
Sbjct: 196 SLVTMSTIMRRLVRGGRYDDAAEVFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
Query: 247 EEM--CRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICC 420
E C SS +N +I C+ + A K ++EM ++ PD+ +Y ++ C
Sbjct: 256 LEFKDCIPLSS---QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
Query: 421 RKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
R+K + + L +M +K + TY++++H L K++Q+ +A
Sbjct: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
Score = 60.1 bits (144), Expect = 6e-07
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Frame = +1
Query: 43 MQEKGCPP-NVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAG 219
++ K C P + + I++H K ++ +A + + M + PD + I +
Sbjct: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
Query: 220 RLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYA 399
+ +EM G P+V+TY ++ A + Q ALK+ ++M+ C PD Y+
Sbjct: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
Query: 400 PLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
L+ I + +K + DM K+ + ++ TY+ +I C + E A
Sbjct: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
>ref|XP_006420511.1| hypothetical protein CICLE_v10006965mg, partial [Citrus clementina]
gi|557522384|gb|ESR33751.1| hypothetical protein
CICLE_v10006965mg, partial [Citrus clementina]
Length = 620
Score = 256 bits (654), Expect(2) = 4e-71
Identities = 121/186 (65%), Positives = 157/186 (84%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDFRKVD L EMQEKGC P+V+TYTIVMH+LGKAK+ EAL+VYE+MK + C+PDTSF
Sbjct: 348 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 407
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
++SLI+I+SKAGR++DA++I+E+M + G PNV+TYNTMIS+AC S+E++ALKLLQ+ME
Sbjct: 408 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 467
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E LCKPD +TYAPLLK+CCRKK +KVL +LL M K D+S+D GTY+ ++ GL +S +LE
Sbjct: 468 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 527
Query: 544 QACLFF 561
AC FF
Sbjct: 528 LACSFF 533
Score = 38.9 bits (89), Expect(2) = 4e-71
Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Frame = +2
Query: 545 KLAC-FFEEMVLKGLVPWSSTFNMLVDVLERKN 640
+LAC FFEEMV KG+VP +T+ ML + LE+K+
Sbjct: 527 ELACSFFEEMVSKGIVPHHNTYKMLEEKLEKKS 559
Score = 71.2 bits (173), Expect(2) = 3e-11
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = +1
Query: 43 MQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTS-FFNSLIYIVSKAG 219
M++ G + +++M +L K A +V+ K C+P +S FN LI+ K
Sbjct: 257 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 314
Query: 220 RLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYA 399
++ DA K +EM + G SP+V++Y I C + L+EM+E+ CKP + TY
Sbjct: 315 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 374
Query: 400 PLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
++ + K I + M D D YS +I L K+ +++ A
Sbjct: 375 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 424
Score = 23.5 bits (49), Expect(2) = 3e-11
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 527 RVNN*NKLACFFEEMVLKGLVPWSSTFN-MLVDVLERKNMENA 652
RV + N++ FE+M +G+VP T+N M+ R ENA
Sbjct: 420 RVKDANEI---FEDMKKQGVVPNVLTYNTMISSACARSEEENA 459
Score = 60.1 bits (144), Expect = 6e-07
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Frame = +1
Query: 43 MQEKGCPP-NVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAG 219
++ K C P + + I++H K ++ +A + + M + PD + I +
Sbjct: 290 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 349
Query: 220 RLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYA 399
+ +EM G P+V+TY ++ A + Q ALK+ ++M+ C PD Y+
Sbjct: 350 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 409
Query: 400 PLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
L+ I + +K + DM K+ + ++ TY+ +I C + E A
Sbjct: 410 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 459
>ref|XP_007221599.1| hypothetical protein PRUPE_ppa026817mg, partial [Prunus persica]
gi|462418535|gb|EMJ22798.1| hypothetical protein
PRUPE_ppa026817mg, partial [Prunus persica]
Length = 543
Score = 252 bits (643), Expect(2) = 5e-71
Identities = 114/187 (60%), Positives = 153/187 (81%)
Frame = +1
Query: 1 HEKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTS 180
H+KDFRKVD +L EM++K C PN VTYTI+MH+LGKA+E +ALEVYE+MKR+ CVPDTS
Sbjct: 311 HDKDFRKVDEVLGEMKDKACEPNTVTYTIIMHALGKAREITKALEVYEKMKRSGCVPDTS 370
Query: 181 FFNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEM 360
F+NSLI+++ KAGRL+D ++ E+M G P+ +T+NT+IS+AC HSQE++ALKLL+ M
Sbjct: 371 FYNSLIFLLGKAGRLKDVQEVVEDMTNQGVKPDTLTHNTLISSACAHSQEEAALKLLKNM 430
Query: 361 EERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQL 540
EE CKPDLKTYAPLLK+ CRKK ++VL +LL+ M K D+S++ GTY+L++ GLC + +L
Sbjct: 431 EEESCKPDLKTYAPLLKLFCRKKRMRVLCFLLDHMFKNDVSIEGGTYALLVRGLCSNGKL 490
Query: 541 EQACLFF 561
E AC FF
Sbjct: 491 ENACSFF 497
Score = 42.7 bits (99), Expect(2) = 5e-71
Identities = 22/33 (66%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Frame = +2
Query: 551 AC-FFEEMVLKGLVPWSSTFNMLVDVLERKNME 646
AC FFEEMV KG VP ST+NML+ LE K+ME
Sbjct: 493 ACSFFEEMVSKGFVPKDSTYNMLIKELEGKSME 525
Score = 58.2 bits (139), Expect = 2e-06
Identities = 39/182 (21%), Positives = 78/182 (42%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
E+ + +E +E P N T+ +++H K ++ A E M+++ PD
Sbjct: 243 ERSVEHAHEVFLEFKES-IPLNPQTFNVLIHGWCKPRKLDIARNTMEEMEKHGFHPDVLS 301
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+ I + ++ EM PN +TY ++ A + + AL++ ++M+
Sbjct: 302 YTCFIEAYCHDKDFRKVDEVLGEMKDKACEPNTVTYTIIMHALGKAREITKALEVYEKMK 361
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
C PD Y L+ + + +K + ++ DM + + D T++ +I C Q E
Sbjct: 362 RSGCVPDTSFYNSLIFLLGKAGRLKDVQEVVEDMTNQGVKPDTLTHNTLISSACAHSQEE 421
Query: 544 QA 549
A
Sbjct: 422 AA 423
>ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543729|gb|EEF45257.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 549
Score = 249 bits (637), Expect(2) = 1e-70
Identities = 116/185 (62%), Positives = 153/185 (82%)
Frame = +1
Query: 7 KDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFF 186
KDFR V++I EMQEK C PNV+TYTI MH+LGKAK+ +ALEVYE MK N CVPD SF+
Sbjct: 318 KDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFY 377
Query: 187 NSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEE 366
+SLI++++++GRL+DA ++E+M + G SP+++TYNTMI++AC H +E++ALKLL+ MEE
Sbjct: 378 SSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEE 437
Query: 367 RLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQ 546
CKPD++TYAPLLK+CCRKK IKVL +LLN M K +IS+DLGTY L++ GLCKS +LE
Sbjct: 438 DSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLEL 497
Query: 547 ACLFF 561
AC FF
Sbjct: 498 ACSFF 502
Score = 43.9 bits (102), Expect(2) = 1e-70
Identities = 21/37 (56%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +2
Query: 545 KLAC-FFEEMVLKGLVPWSSTFNMLVDVLERKNMENA 652
+LAC FFEEMV+KGL+P T+ MLV+ LE+ N+ A
Sbjct: 496 ELACSFFEEMVMKGLIPRDRTYKMLVEELEQNNLTEA 532
Score = 72.8 bits (177), Expect = 9e-11
Identities = 44/175 (25%), Positives = 82/175 (46%)
Frame = +1
Query: 25 DSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYI 204
DSI ++ Q ++ I++H KA++ +A ++ + M + P+ + I +
Sbjct: 263 DSIHVDFQ---------SFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIEL 313
Query: 205 VSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPD 384
K ++ I+ EM PNV+TY + A + Q AL++ + M+ C PD
Sbjct: 314 YCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPD 373
Query: 385 LKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
Y+ L+ + + +K + + DM K+ +S DL TY+ +I C + E A
Sbjct: 374 ASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENA 428
Score = 68.6 bits (166), Expect = 2e-09
Identities = 45/169 (26%), Positives = 78/169 (46%)
Frame = +1
Query: 43 MQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGR 222
+++ G ++ ++M +L K A + K +S D FN L++ KA +
Sbjct: 226 IEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFK-DSIHVDFQSFNILLHGYCKARK 284
Query: 223 LQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAP 402
L DA KI +EM + G PNV++Y I C+ ++ + EM+E+ CKP++ TY
Sbjct: 285 LDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTI 344
Query: 403 LLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
+ + K + + M D YS +I L +S +L+ A
Sbjct: 345 FMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDA 393
>ref|XP_004298015.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 573
Score = 247 bits (631), Expect(2) = 3e-70
Identities = 113/186 (60%), Positives = 152/186 (81%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
+KDFRKVD ++ EM+ KGC PN VTYT+++H+LGKA+E +ALEVYE MK N VPD SF
Sbjct: 340 DKDFRKVDEVVSEMKGKGCAPNAVTYTVILHALGKAREITKALEVYEEMKGNGVVPDVSF 399
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
++SL+YI+ KAGRL+D ++ E+M + G PNV+TYNT+IS ACEHSQE+ ALKLL++ME
Sbjct: 400 YSSLLYILGKAGRLKDVQEVVEDMTKQGVKPNVVTYNTLISCACEHSQEEGALKLLKKME 459
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
+ CKPD++TYAPLLK+CCRKK +KVL++LL+ M K DIS+D GTY+L++ G+CK+ +LE
Sbjct: 460 DS-CKPDVETYAPLLKMCCRKKRMKVLYFLLDHMFKNDISIDAGTYALLVRGMCKNGKLE 518
Query: 544 QACLFF 561
A FF
Sbjct: 519 NASAFF 524
Score = 44.7 bits (104), Expect(2) = 3e-70
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 551 ACFFEEMVLKGLVPWSSTFNMLVDVLERKNME 646
+ FFEEMVLKG VP ST+ M+++ L+RK+ME
Sbjct: 521 SAFFEEMVLKGFVPKDSTYKMMIEELQRKSME 552
Score = 65.1 bits (157), Expect = 2e-08
Identities = 44/182 (24%), Positives = 84/182 (46%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
E+ +E +E P N ++ I++H K ++ A E M+R+ PD
Sbjct: 271 ERSVELAQEAFLEFKES-VPVNDHSFNILIHGWCKNRKMDIARSTMEEMERHGFRPDVFS 329
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+ L+ + ++ EM G +PN +TY ++ A + + AL++ +EM+
Sbjct: 330 YTCLVEAYCSDKDFRKVDEVVSEMKGKGCAPNAVTYTVILHALGKAREITKALEVYEEMK 389
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
PD+ Y+ LL I + +K + ++ DM K+ + ++ TY+ +I C+ Q E
Sbjct: 390 GNGVVPDVSFYSSLLYILGKAGRLKDVQEVVEDMTKQGVKPNVVTYNTLISCACEHSQEE 449
Query: 544 QA 549
A
Sbjct: 450 GA 451
>ref|XP_004986242.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Setaria italica]
Length = 760
Score = 243 bits (619), Expect(2) = 3e-67
Identities = 107/185 (57%), Positives = 151/185 (81%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDF+ VD+IL EM+ KGCPPN++TYTIVMH+LGKA T EAL+ ++++K+++C PD SF
Sbjct: 522 EKDFQTVDNILDEMRRKGCPPNIITYTIVMHALGKAGRTQEALDTFKKVKQDACTPDASF 581
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+NSLIYI+ +AGR Q+A+ + EM RTG SPN+ T+NT+ISAAC+HSQ ++ALK L +ME
Sbjct: 582 YNSLIYILGRAGRFQEANFVITEMRRTGISPNLTTFNTLISAACDHSQAENALKQLVQME 641
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E+ CKPD+KTY PLLK+CCR++W+K L +L+ M +KDI+ D TY+L++ LC++ +L
Sbjct: 642 EQSCKPDIKTYIPLLKLCCRRQWVKTLLFLICHMFRKDITPDFSTYTLLVSWLCRNGRLA 701
Query: 544 QACLF 558
Q+CLF
Sbjct: 702 QSCLF 706
Score = 39.3 bits (90), Expect(2) = 3e-67
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 557 FFEEMVLKGLVPWSSTFNMLVDVLERKNMENA 652
F EEMVLKG P TF++++D LE+ NM +A
Sbjct: 706 FLEEMVLKGFAPKQETFDLVLDKLEKMNMHSA 737
Score = 71.2 bits (173), Expect = 3e-10
Identities = 42/163 (25%), Positives = 76/163 (46%)
Frame = +1
Query: 61 PPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHK 240
PP+ + ++H KA+ EA + + M+ + P + SLI Q
Sbjct: 471 PPDESIFNTLVHGWCKARMLNEARKTMKEMEEHGFSPSVVTYTSLIEAYCMEKDFQTVDN 530
Query: 241 IYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICC 420
I +EM R G PN++TY ++ A + + + AL +++++ C PD Y L+ I
Sbjct: 531 ILDEMRRKGCPPNIITYTIVMHALGKAGRTQEALDTFKKVKQDACTPDASFYNSLIYILG 590
Query: 421 RKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
R + +++ +M + IS +L T++ +I C Q E A
Sbjct: 591 RAGRFQEANFVITEMRRTGISPNLTTFNTLISAACDHSQAENA 633
>ref|XP_002314678.2| hypothetical protein POPTR_0010s09410g [Populus trichocarpa]
gi|550329442|gb|EEF00849.2| hypothetical protein
POPTR_0010s09410g [Populus trichocarpa]
Length = 553
Score = 240 bits (612), Expect(2) = 9e-67
Identities = 108/186 (58%), Positives = 151/186 (81%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
+KDFR V+++ EMQEKGC PNV+TYT VMH+LGKA++ EALEVYE+MKRN C+PD+ F
Sbjct: 321 QKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKF 380
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
++SLIY++S++GR++DA ++E+M + G N+ YNTMIS+AC HSQ SALKLL+ ME
Sbjct: 381 YSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERME 440
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
CKPD+KTYAPLLK+CCR+K IK+L +LL+ M K ++S+DLGTY+L+++ C++ +LE
Sbjct: 441 GDSCKPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLE 500
Query: 544 QACLFF 561
AC +F
Sbjct: 501 HACFYF 506
Score = 40.4 bits (93), Expect(2) = 9e-67
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Frame = +2
Query: 551 ACF-FEEMVLKGLVPWSSTFNMLVDVLERKNME 646
ACF F+E VLKG+VP TF LV+ LE+KNM+
Sbjct: 502 ACFYFQEAVLKGMVPMVKTFKALVEELEQKNMK 534
Score = 73.9 bits (180), Expect = 4e-11
Identities = 40/154 (25%), Positives = 78/154 (50%)
Frame = +1
Query: 76 TYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHKIYEEM 255
++ I++H KA+ A ++ E M+++ PD ++ I + ++ +++EM
Sbjct: 275 SFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEM 334
Query: 256 CRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICCRKKWI 435
G PNV+TY T++ A + Q AL++ ++M+ C PD K Y+ L+ + + I
Sbjct: 335 QEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRI 394
Query: 436 KVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQ 537
K + + DM K+ + +L Y+ +I C Q
Sbjct: 395 KDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQ 428
Score = 67.0 bits (162), Expect = 5e-09
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Frame = +1
Query: 43 MQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVP-DTSFFNSLIYIVSKAG 219
+++ G + ++M +L K + +A + K C+ D+S FN LI+ KA
Sbjct: 230 IEKYGASKDREALNVLMDALVKEGDVEDAHSAFLEFK--DCITLDSSSFNILIHGYCKAR 287
Query: 220 RLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYA 399
A KI EEM + G P+V++Y+ I+A CE ++ + EM+E+ CKP++ TY
Sbjct: 288 MFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYT 347
Query: 400 PLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
++ + + + + M + D YS +I+ L +S +++ A
Sbjct: 348 TVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDA 397
>gb|EXB51131.1| hypothetical protein L484_009095 [Morus notabilis]
Length = 542
Score = 258 bits (658), Expect = 1e-66
Identities = 117/186 (62%), Positives = 154/186 (82%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
+KDFRKV ++L EM +KGC PN+VTYTI+MH+LGKAK+ EAL+VYE+MK N CVPD SF
Sbjct: 311 DKDFRKVYALLDEMNDKGCTPNIVTYTILMHALGKAKQVNEALKVYEKMKENGCVPDASF 370
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+NSLI+I+ KAGRL+DA +++++M + G +PN +TY TMIS C+HS E+ ALKLL++ME
Sbjct: 371 YNSLIFILGKAGRLKDAREVFDDMSKQGVAPNGLTYTTMISCVCDHSLEEEALKLLKKME 430
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E CKPDL TYAPLLK+CC+KK +KVL++LLN M D+S+D+GTYSL+I GLCKS ++E
Sbjct: 431 EESCKPDLGTYAPLLKMCCKKKRMKVLYFLLNHMFNNDVSIDVGTYSLLITGLCKSGKVE 490
Query: 544 QACLFF 561
AC FF
Sbjct: 491 HACSFF 496
Score = 70.1 bits (170), Expect = 6e-10
Identities = 42/167 (25%), Positives = 86/167 (51%)
Frame = +1
Query: 49 EKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQ 228
+K P N ++ I+++ +A++ +A ++ E M+++ PDT + L+ +
Sbjct: 256 KKSIPVNDQSFNILINGWCRARQLDKARKIMEDMEKHGFKPDTFSYTCLVDAYCGDKDFR 315
Query: 229 DAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLL 408
+ + +EM G +PN++TY ++ A + Q ALK+ ++M+E C PD Y L+
Sbjct: 316 KVYALLDEMNDKGCTPNIVTYTILMHALGKAKQVNEALKVYEKMKENGCVPDASFYNSLI 375
Query: 409 KICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
I + +K + +DM K+ ++ + TY+ +I +C E+A
Sbjct: 376 FILGKAGRLKDAREVFDDMSKQGVAPNGLTYTTMISCVCDHSLEEEA 422
>ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 241 bits (615), Expect(2) = 3e-66
Identities = 110/186 (59%), Positives = 151/186 (81%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDFR VD +L++M+ KGC PNV+T+TI+MH+LGKAK+ EAL+VYE+MK+ CVPD+SF
Sbjct: 382 EKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSF 441
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
++SLI+I+ KAGRL D +I E+M + G +P+V+TYNT+IS AC HSQE++AL LL +ME
Sbjct: 442 YSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKME 501
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E CKPDLKTY PLLK+ CRKK +KVL +LL+ M K D+S++ GTY++++ GLC++ +L
Sbjct: 502 EVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLH 561
Query: 544 QACLFF 561
AC FF
Sbjct: 562 LACSFF 567
Score = 37.7 bits (86), Expect(2) = 3e-66
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +2
Query: 548 LAC-FFEEMVLKGLVPWSSTFNMLVDVLERKNM 643
LAC FF EM+ K +VP STF ML + LERK+M
Sbjct: 562 LACSFFGEMLSKAMVPKDSTFKMLKEELERKSM 594
Score = 75.5 bits (184), Expect = 1e-11
Identities = 44/181 (24%), Positives = 96/181 (53%)
Frame = +1
Query: 7 KDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFF 186
K+FR + ++ EM ++ T + V+ L +A EA+ + +++ DT+
Sbjct: 244 KNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAM 303
Query: 187 NSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEE 366
N L+ + K ++DAH ++ E+ + N+ ++N +I C+ + A K++ E+E+
Sbjct: 304 NVLMDALVKEASVEDAHNVFREL-KCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEK 362
Query: 367 RLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQ 546
+PD+ +Y ++ CR+K + + +L M K ++ T+++I+H L K++Q+ +
Sbjct: 363 SGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINE 422
Query: 547 A 549
A
Sbjct: 423 A 423
Score = 72.4 bits (176), Expect = 1e-10
Identities = 41/163 (25%), Positives = 84/163 (51%)
Frame = +1
Query: 61 PPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHK 240
P N+ ++ +++H KAK+ EA ++ ++++ PD + + I + ++ K
Sbjct: 331 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDK 390
Query: 241 IYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICC 420
+ +M G PNV+T+ ++ A + Q ALK+ ++M++ C PD Y+ L+ I
Sbjct: 391 VLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILG 450
Query: 421 RKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
+ + + ++ DM K+ ++ D+ TY+ +I C Q E A
Sbjct: 451 KAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETA 493
>ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 241 bits (615), Expect(2) = 3e-66
Identities = 110/186 (59%), Positives = 151/186 (81%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDFR VD +L++M+ KGC PNV+T+TI+MH+LGKAK+ EAL+VYE+MK+ CVPD+SF
Sbjct: 359 EKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSF 418
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
++SLI+I+ KAGRL D +I E+M + G +P+V+TYNT+IS AC HSQE++AL LL +ME
Sbjct: 419 YSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKME 478
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E CKPDLKTY PLLK+ CRKK +KVL +LL+ M K D+S++ GTY++++ GLC++ +L
Sbjct: 479 EVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLH 538
Query: 544 QACLFF 561
AC FF
Sbjct: 539 LACSFF 544
Score = 37.7 bits (86), Expect(2) = 3e-66
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +2
Query: 548 LAC-FFEEMVLKGLVPWSSTFNMLVDVLERKNM 643
LAC FF EM+ K +VP STF ML + LERK+M
Sbjct: 539 LACSFFGEMLSKAMVPKDSTFKMLKEELERKSM 571
Score = 75.5 bits (184), Expect = 1e-11
Identities = 44/181 (24%), Positives = 96/181 (53%)
Frame = +1
Query: 7 KDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFF 186
K+FR + ++ EM ++ T + V+ L +A EA+ + +++ DT+
Sbjct: 221 KNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAM 280
Query: 187 NSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEE 366
N L+ + K ++DAH ++ E+ + N+ ++N +I C+ + A K++ E+E+
Sbjct: 281 NVLMDALVKEASVEDAHNVFREL-KCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEK 339
Query: 367 RLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQ 546
+PD+ +Y ++ CR+K + + +L M K ++ T+++I+H L K++Q+ +
Sbjct: 340 SGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINE 399
Query: 547 A 549
A
Sbjct: 400 A 400
Score = 72.4 bits (176), Expect = 1e-10
Identities = 41/163 (25%), Positives = 84/163 (51%)
Frame = +1
Query: 61 PPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHK 240
P N+ ++ +++H KAK+ EA ++ ++++ PD + + I + ++ K
Sbjct: 308 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDK 367
Query: 241 IYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICC 420
+ +M G PNV+T+ ++ A + Q ALK+ ++M++ C PD Y+ L+ I
Sbjct: 368 VLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILG 427
Query: 421 RKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
+ + + ++ DM K+ ++ D+ TY+ +I C Q E A
Sbjct: 428 KAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETA 470
>ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 241 bits (614), Expect(2) = 2e-65
Identities = 108/185 (58%), Positives = 150/185 (81%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDF+ V +IL EM KGC PNV+TYTIVMH+LGKA T EAL+V++++KR+ CVPD SF
Sbjct: 312 EKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASF 371
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+NS+IYI+ +AGRL+DA+ +++EMCRTG P V +NTMISAAC+HSQ ++ALK+L +ME
Sbjct: 372 YNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKME 431
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E+ CKPD+KTY PLLK+CC+++W+K+L +L+ M +KDIS D TY L++ LC++ +
Sbjct: 432 EQSCKPDIKTYTPLLKLCCKRQWMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPA 491
Query: 544 QACLF 558
Q+CLF
Sbjct: 492 QSCLF 496
Score = 35.4 bits (80), Expect(2) = 2e-65
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +2
Query: 557 FFEEMVLKGLVPWSSTFNMLVDVLERKNMENA 652
F EEMVLKG +P TF+++++ L++ N+ +A
Sbjct: 496 FLEEMVLKGFMPKQETFDLVMEKLDKGNLHSA 527
Score = 64.3 bits (155), Expect = 3e-08
Identities = 41/182 (22%), Positives = 81/182 (44%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EK ++ + E++ PP+ ++ ++H +A+ EA + + M+ + P
Sbjct: 243 EKSVKRARGVFQELRGV-VPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVIT 301
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+ SLI Q + I EMC G PNV+TY ++ A + + + AL + +++
Sbjct: 302 YTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVK 361
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
C PD Y ++ I R ++ + ++M + I + ++ +I C Q E
Sbjct: 362 RDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAE 421
Query: 544 QA 549
A
Sbjct: 422 NA 423
>ref|XP_006839002.1| hypothetical protein AMTR_s00002p00271910 [Amborella trichopoda]
gi|548841508|gb|ERN01571.1| hypothetical protein
AMTR_s00002p00271910 [Amborella trichopoda]
Length = 569
Score = 253 bits (647), Expect = 3e-65
Identities = 114/184 (61%), Positives = 154/184 (83%)
Frame = +1
Query: 10 DFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFN 189
DF+ V+++L EM+ KGCPP+VVTYT+VMH+ GKAKET EAL +YERMK++ C PD F+N
Sbjct: 324 DFQNVEALLNEMEAKGCPPSVVTYTVVMHAFGKAKETQEALRIYERMKKSGCTPDALFYN 383
Query: 190 SLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEER 369
SLI+I+ KAGRL+DA I+EEM G +P++ TYNT+IS CEHSQE+ AL++L+EM+E
Sbjct: 384 SLIFILGKAGRLRDARTIFEEMPNNGITPSLTTYNTLISVICEHSQEEEALEVLREMKES 443
Query: 370 LCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
CKPD++TY PLLK+ C+K +KVL YLL+DM++KDISLDLGT+SL++HGLC++ +L+ A
Sbjct: 444 SCKPDIRTYTPLLKMFCKKGRMKVLEYLLHDMIRKDISLDLGTFSLLVHGLCRASKLDGA 503
Query: 550 CLFF 561
CLFF
Sbjct: 504 CLFF 507
Score = 58.5 bits (140), Expect(2) = 4e-08
Identities = 44/173 (25%), Positives = 80/173 (46%)
Frame = +1
Query: 43 MQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGR 222
++ G + + +V+ +L K + A +++ + R P+ FN LI+ KA R
Sbjct: 231 IESLGLRKDTSSMNVVLDTLCKERNVERARDLFLVLGRE-IPPNAHTFNVLIHGWCKAKR 289
Query: 223 LQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAP 402
L++A EM G +P V++Y +++ A C ++ LL EME + C P + TY
Sbjct: 290 LEEAEWTMREMKGYGFNPCVISYTSLVEAYCSLHDFQNVEALLNEMEAKGCPPSVVTYTV 349
Query: 403 LLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQACLFF 561
++ + K + + M K + D Y+ +I L K+ +L A F
Sbjct: 350 VMHAFGKAKETQEALRIYERMKKSGCTPDALFYNSLIFILGKAGRLRDARTIF 402
Score = 25.4 bits (54), Expect(2) = 4e-08
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 560 FEEMVLKGLVPWSSTFNMLVDVLERKNME 646
FEEM G+ P +T+N L+ V+ + E
Sbjct: 402 FEEMPNNGITPSLTTYNTLISVICEHSQE 430
>ref|XP_007034825.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508713854|gb|EOY05751.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 554
Score = 251 bits (641), Expect = 1e-64
Identities = 118/187 (63%), Positives = 152/187 (81%)
Frame = +1
Query: 1 HEKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTS 180
HEKDF VD++L EM+EKGC PNVVTYTI+MH+ GKA +ALEVYE+MK + C+PD+S
Sbjct: 316 HEKDFHNVDAVLDEMKEKGCRPNVVTYTIIMHARGKAGIIGKALEVYEKMKNDGCLPDSS 375
Query: 181 FFNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEM 360
F++SLI+I+SK+GRL+DA +I+E+M + G PNV+TYNTMI++AC HS E+ ALKLLQ M
Sbjct: 376 FYSSLIFILSKSGRLKDADEIFEDMKKQGVRPNVLTYNTMITSACGHSLEEKALKLLQRM 435
Query: 361 EERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQL 540
EE CKPD+ TY PLLK+CCRKK +KVL +LL+ ML D+S+DL TYSL++ LC S +L
Sbjct: 436 EEDSCKPDISTYGPLLKMCCRKKRMKVLNFLLSHMLNNDVSIDLATYSLLVQRLCNSGKL 495
Query: 541 EQACLFF 561
EQAC FF
Sbjct: 496 EQACAFF 502
Score = 65.1 bits (157), Expect = 2e-08
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Frame = +1
Query: 31 ILIEMQEKGCPP-NVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIV 207
+ +E++E C P N ++ I++H KA+ +A ++ M+ C P + S I
Sbjct: 257 VFVELKE--CMPLNSSSFNILIHGFCKARRLDDARKILNEMEEYGCQPCVVSYTSFIEAY 314
Query: 208 SKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDL 387
+ + +EM G PNV+TY ++ A + AL++ ++M+ C PD
Sbjct: 315 CHEKDFHNVDAVLDEMKEKGCRPNVVTYTIIMHARGKAGIIGKALEVYEKMKNDGCLPDS 374
Query: 388 KTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
Y+ L+ I + +K + DM K+ + ++ TY+ +I C E+A
Sbjct: 375 SFYSSLIFILSKSGRLKDADEIFEDMKKQGVRPNVLTYNTMITSACGHSLEEKA 428
Score = 57.4 bits (137), Expect = 4e-06
Identities = 31/116 (26%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = +1
Query: 16 RKVDSILIEMQEKGCPPNVVTY-TIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNS 192
+ D I +M+++G PNV+TY T++ + G + E +AL++ +RM+ +SC PD S +
Sbjct: 391 KDADEIFEDMKKQGVRPNVLTYNTMITSACGHSLEE-KALKLLQRMEEDSCKPDISTYGP 449
Query: 193 LIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEM 360
L+ + + R++ + + M S ++ TY+ ++ C + + A +EM
Sbjct: 450 LLKMCCRKKRMKVLNFLLSHMLNNDVSIDLATYSLLVQRLCNSGKLEQACAFFEEM 505
>ref|XP_004511384.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cicer arietinum]
Length = 557
Score = 235 bits (600), Expect(2) = 2e-64
Identities = 110/187 (58%), Positives = 151/187 (80%)
Frame = +1
Query: 1 HEKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTS 180
H+KDFRKVD +L EM+E GCPPN VTYTIVM +LGKA + +AL+ YERMKR+ VPDT
Sbjct: 322 HDKDFRKVDQVLEEMRENGCPPNAVTYTIVMLALGKAGQLSKALDEYERMKRDGIVPDTP 381
Query: 181 FFNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEM 360
F++SL++I+ KAGRL+DA +++E+M + G +V+TY+TMI+ AC HS+E++AL+LL+EM
Sbjct: 382 FYSSLVFILGKAGRLKDACEVFEDMPKQGVVRDVVTYDTMITIACIHSKEETALRLLKEM 441
Query: 361 EERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQL 540
EE CKPD++TY PL+K+CC+KK +KVL +LL+ M K D+S DLGTY+L++H L K +L
Sbjct: 442 EETSCKPDIQTYHPLIKMCCKKKRMKVLKFLLDHMFKNDLSPDLGTYTLLVHSLTKCGKL 501
Query: 541 EQACLFF 561
E AC FF
Sbjct: 502 EDACRFF 508
Score = 37.0 bits (84), Expect(2) = 2e-64
Identities = 20/32 (62%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 551 AC-FFEEMVLKGLVPWSSTFNMLVDVLERKNM 643
AC FFEEMVLKGL P T +LV LE K M
Sbjct: 504 ACRFFEEMVLKGLTPRQCTLKLLVGKLESKKM 535
>ref|NP_001183846.1| hypothetical protein [Zea mays] gi|238014984|gb|ACR38527.1| unknown
[Zea mays] gi|414872746|tpg|DAA51303.1| TPA:
hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 236 bits (603), Expect(2) = 2e-63
Identities = 107/185 (57%), Positives = 146/185 (78%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDF+ VD IL EM KGC PN++TYTIVMH+LGKA T EAL+ ++++K++ C D SF
Sbjct: 349 EKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASF 408
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+N LIYI+ +AGRLQDA+ + EEM RTG SPN+ T+NT+ISAAC+HS ++ALKLL +ME
Sbjct: 409 YNCLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQME 468
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E+ C PD+KTY PLLK+CCR+KW+K L +L+ M +KDI+ D TY+L++ LC++ +L
Sbjct: 469 EQSCNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLT 528
Query: 544 QACLF 558
Q+CLF
Sbjct: 529 QSCLF 533
Score = 33.1 bits (74), Expect(2) = 2e-63
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 557 FFEEMVLKGLVPWSSTFNMLVDVLERKNMENA 652
F EEMVLKG P +TF+++++ L+ +M +A
Sbjct: 533 FLEEMVLKGFTPQQATFDLVLEKLKNMHMLSA 564
Score = 67.8 bits (164), Expect = 3e-09
Identities = 41/163 (25%), Positives = 77/163 (47%)
Frame = +1
Query: 61 PPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHK 240
PP+ ++ ++H KA+ EA E + M+R+ P + + LI Q
Sbjct: 298 PPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDG 357
Query: 241 IYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICC 420
I +EM G +PN++TY ++ A + + + AL ++++ C D Y L+ I C
Sbjct: 358 ILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILC 417
Query: 421 RKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
R ++ +++ +M + IS +L T++ +I C E A
Sbjct: 418 RAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENA 460
>dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 234 bits (596), Expect(2) = 3e-63
Identities = 104/185 (56%), Positives = 149/185 (80%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDF+ V +IL EM+ KGCPPNV+TYTIVMH+LGKA T EAL+++++++ + C PD SF
Sbjct: 312 EKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASF 371
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+NSLIYI+ +AGRL+DA+ + ++M TG P V T+NT+ISAAC+HSQ ++ALK+L +ME
Sbjct: 372 YNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKME 431
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E+ CKPD+KTY PLLK+CC+++WIKVL +L+ M +KDI+ D TY+L++ LC++ +
Sbjct: 432 EQSCKPDIKTYTPLLKLCCKRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPA 491
Query: 544 QACLF 558
Q+CLF
Sbjct: 492 QSCLF 496
Score = 35.0 bits (79), Expect(2) = 3e-63
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 557 FFEEMVLKGLVPWSSTFNMLVDVLERKNMENA 652
F EEMVLKG P TF+++ + L++ N+ +A
Sbjct: 496 FLEEMVLKGFAPKKETFDLVAEKLDKANLHSA 527
Score = 84.7 bits (208), Expect = 2e-14
Identities = 52/194 (26%), Positives = 101/194 (52%)
Frame = +1
Query: 7 KDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFF 186
K F + ++ +M E G ++ T T VM L A +A++ + +M + V DT+
Sbjct: 174 KQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAM 233
Query: 187 NSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEE 366
N L+ + K ++ A ++E+ R P+ ++NT++ C+ A +++EMEE
Sbjct: 234 NVLLDTLCKERSVKRARGAFQEL-RGSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEE 292
Query: 367 RLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQ 546
KP + TY L++ C +K + ++ +LN+M K ++ TY++++H L K+ + ++
Sbjct: 293 HGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQE 352
Query: 547 ACLFF*GNGVEGTG 588
A F + V G G
Sbjct: 353 ALDIF--DKVRGDG 364
Score = 61.2 bits (147), Expect = 3e-07
Identities = 39/163 (23%), Positives = 72/163 (44%)
Frame = +1
Query: 61 PPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHK 240
PP+ ++ ++H KA+ EA ++ + M+ + P + SLI Q +
Sbjct: 261 PPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYA 320
Query: 241 IYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICC 420
I EM G PNV+TY ++ A + + + AL + ++ C PD Y L+ I
Sbjct: 321 ILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILG 380
Query: 421 RKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
R ++ +++ M + + T++ +I C Q E A
Sbjct: 381 RAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENA 423
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 233 bits (595), Expect(2) = 5e-63
Identities = 103/185 (55%), Positives = 149/185 (80%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDF+ V ++L EM+++ CPPNVVTYTI+MH+LGKA T EAL+ ++++K + PD SF
Sbjct: 1638 EKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASF 1697
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+NSLIYI+ +AGRL+DA+ + EEM TG +PNV T+NT+ISAAC+HSQ ++ALKLL +ME
Sbjct: 1698 YNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKME 1757
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E+ C PD+KTY PLLK+CC+++W+K+L +L+ M +KDIS D TY+L++ LC++ ++
Sbjct: 1758 EQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVA 1817
Query: 544 QACLF 558
Q+CLF
Sbjct: 1818 QSCLF 1822
Score = 34.7 bits (78), Expect(2) = 5e-63
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +2
Query: 557 FFEEMVLKGLVPWSSTFNMLVDVLERKNMEN 649
F EEMV KG P TF+++++ LE++N+++
Sbjct: 1822 FLEEMVSKGFAPKQETFDLVMEKLEKRNLQS 1852
Score = 71.2 bits (173), Expect(2) = 5e-11
Identities = 44/170 (25%), Positives = 86/170 (50%)
Frame = +1
Query: 40 EMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAG 219
+M G + +++ +L K + A V++ + R + PD + FN+L++ KA
Sbjct: 1546 KMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL-RGTIPPDENSFNTLVHGWCKAR 1604
Query: 220 RLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYA 399
L++A EEM + G SP+V+TY +++ A C ++ LL EM +R C P++ TY
Sbjct: 1605 MLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYT 1664
Query: 400 PLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
L+ + + + + + ++ D Y+ +I+ L ++ +LE A
Sbjct: 1665 ILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDA 1714
Score = 22.3 bits (46), Expect(2) = 5e-11
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 563 EEMVLKGLVPWSSTFNMLVD-VLERKNMENA 652
EEM G+ P +TFN L+ + ENA
Sbjct: 1719 EEMRTTGIAPNVTTFNTLISAACDHSQAENA 1749
Score = 67.4 bits (163), Expect = 4e-09
Identities = 40/163 (24%), Positives = 77/163 (47%)
Frame = +1
Query: 61 PPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHK 240
PP+ ++ ++H KA+ EAL+ E MK++ P + SL+ Q +
Sbjct: 1587 PPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYA 1646
Query: 241 IYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICC 420
+ +EM + PNV+TY ++ A + + + AL +++E PD Y L+ I
Sbjct: 1647 LLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILG 1706
Query: 421 RKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
R ++ + ++ +M I+ ++ T++ +I C Q E A
Sbjct: 1707 RAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENA 1749
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 233 bits (595), Expect(2) = 5e-63
Identities = 103/185 (55%), Positives = 149/185 (80%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDF+ V ++L EM+++ CPPNVVTYTI+MH+LGKA T EAL+ ++++K + PD SF
Sbjct: 1597 EKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASF 1656
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+NSLIYI+ +AGRL+DA+ + EEM TG +PNV T+NT+ISAAC+HSQ ++ALKLL +ME
Sbjct: 1657 YNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKME 1716
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E+ C PD+KTY PLLK+CC+++W+K+L +L+ M +KDIS D TY+L++ LC++ ++
Sbjct: 1717 EQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVA 1776
Query: 544 QACLF 558
Q+CLF
Sbjct: 1777 QSCLF 1781
Score = 34.7 bits (78), Expect(2) = 5e-63
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +2
Query: 557 FFEEMVLKGLVPWSSTFNMLVDVLERKNMEN 649
F EEMV KG P TF+++++ LE++N+++
Sbjct: 1781 FLEEMVSKGFAPKQETFDLVMEKLEKRNLQS 1811
Score = 71.2 bits (173), Expect(2) = 5e-11
Identities = 44/170 (25%), Positives = 86/170 (50%)
Frame = +1
Query: 40 EMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAG 219
+M G + +++ +L K + A V++ + R + PD + FN+L++ KA
Sbjct: 1505 KMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL-RGTIPPDENSFNTLVHGWCKAR 1563
Query: 220 RLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYA 399
L++A EEM + G SP+V+TY +++ A C ++ LL EM +R C P++ TY
Sbjct: 1564 MLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYT 1623
Query: 400 PLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
L+ + + + + + ++ D Y+ +I+ L ++ +LE A
Sbjct: 1624 ILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDA 1673
Score = 22.3 bits (46), Expect(2) = 5e-11
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 563 EEMVLKGLVPWSSTFNMLVD-VLERKNMENA 652
EEM G+ P +TFN L+ + ENA
Sbjct: 1678 EEMRTTGIAPNVTTFNTLISAACDHSQAENA 1708
Score = 67.4 bits (163), Expect = 4e-09
Identities = 40/163 (24%), Positives = 77/163 (47%)
Frame = +1
Query: 61 PPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHK 240
PP+ ++ ++H KA+ EAL+ E MK++ P + SL+ Q +
Sbjct: 1546 PPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYA 1605
Query: 241 IYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICC 420
+ +EM + PNV+TY ++ A + + + AL +++E PD Y L+ I
Sbjct: 1606 LLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILG 1665
Query: 421 RKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
R ++ + ++ +M I+ ++ T++ +I C Q E A
Sbjct: 1666 RAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENA 1708
>ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial
[Oryza sativa Japonica Group]
Length = 613
Score = 233 bits (595), Expect(2) = 5e-63
Identities = 103/185 (55%), Positives = 149/185 (80%)
Frame = +1
Query: 4 EKDFRKVDSILIEMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSF 183
EKDF+ V ++L EM+++ CPPNVVTYTI+MH+LGKA T EAL+ ++++K + PD SF
Sbjct: 377 EKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASF 436
Query: 184 FNSLIYIVSKAGRLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEME 363
+NSLIYI+ +AGRL+DA+ + EEM TG +PNV T+NT+ISAAC+HSQ ++ALKLL +ME
Sbjct: 437 YNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKME 496
Query: 364 ERLCKPDLKTYAPLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLE 543
E+ C PD+KTY PLLK+CC+++W+K+L +L+ M +KDIS D TY+L++ LC++ ++
Sbjct: 497 EQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVA 556
Query: 544 QACLF 558
Q+CLF
Sbjct: 557 QSCLF 561
Score = 34.7 bits (78), Expect(2) = 5e-63
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +2
Query: 557 FFEEMVLKGLVPWSSTFNMLVDVLERKNMEN 649
F EEMV KG P TF+++++ LE++N+++
Sbjct: 561 FLEEMVSKGFAPKQETFDLVMEKLEKRNLQS 591
Score = 71.2 bits (173), Expect(2) = 6e-11
Identities = 44/170 (25%), Positives = 86/170 (50%)
Frame = +1
Query: 40 EMQEKGCPPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAG 219
+M G + +++ +L K + A V++ + R + PD + FN+L++ KA
Sbjct: 285 KMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL-RGTIPPDENSFNTLVHGWCKAR 343
Query: 220 RLQDAHKIYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYA 399
L++A EEM + G SP+V+TY +++ A C ++ LL EM +R C P++ TY
Sbjct: 344 MLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYT 403
Query: 400 PLLKICCRKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
L+ + + + + + ++ D Y+ +I+ L ++ +LE A
Sbjct: 404 ILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDA 453
Score = 22.3 bits (46), Expect(2) = 6e-11
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 563 EEMVLKGLVPWSSTFNMLVD-VLERKNMENA 652
EEM G+ P +TFN L+ + ENA
Sbjct: 458 EEMRTTGIAPNVTTFNTLISAACDHSQAENA 488
Score = 67.4 bits (163), Expect = 4e-09
Identities = 40/163 (24%), Positives = 77/163 (47%)
Frame = +1
Query: 61 PPNVVTYTIVMHSLGKAKETYEALEVYERMKRNSCVPDTSFFNSLIYIVSKAGRLQDAHK 240
PP+ ++ ++H KA+ EAL+ E MK++ P + SL+ Q +
Sbjct: 326 PPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYA 385
Query: 241 IYEEMCRTGSSPNVMTYNTMISAACEHSQEKSALKLLQEMEERLCKPDLKTYAPLLKICC 420
+ +EM + PNV+TY ++ A + + + AL +++E PD Y L+ I
Sbjct: 386 LLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILG 445
Query: 421 RKKWIKVLFYLLNDMLKKDISLDLGTYSLIIHGLCKSEQLEQA 549
R ++ + ++ +M I+ ++ T++ +I C Q E A
Sbjct: 446 RAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENA 488