BLASTX nr result
ID: Sinomenium21_contig00021036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00021036
(312 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prun... 62 8e-08
ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containi... 60 3e-07
ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containi... 60 3e-07
ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi... 60 3e-07
ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citr... 57 2e-06
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,... 56 5e-06
ref|XP_007048085.1| Tetratricopeptide repeat (TPR)-like superfam... 56 6e-06
>ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Solanum lycopersicum]
Length = 478
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/33 (81%), Positives = 33/33 (100%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFG 212
+MKEL++KLLTYMD+DGI+PNKKFFL+ALGAFG
Sbjct: 424 DMKELVQKLLTYMDEDGIIPNKKFFLDALGAFG 456
>ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prunus persica]
gi|462407886|gb|EMJ13220.1| hypothetical protein
PRUPE_ppa004899mg [Prunus persica]
Length = 486
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLKAGTESSDSKINSTTEL 158
NMKEL+EKLL MDKDGIVPNK+FFLEALGAF G+ S + +TT L
Sbjct: 430 NMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGS---VTATTGL 477
>ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 526
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAF-GLKAGTESSDSKINSTT 164
N KEL++KLL +MDKDGI+PNK+FFL+ALGA L A +ES+++ +S T
Sbjct: 417 NQKELLDKLLKHMDKDGIIPNKRFFLDALGAVASLPANSESANAATDSNT 466
>ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 420
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLKAGTESSDS 182
NMK+L++KLL MDKDGIVPNK+FFLEALGAF G S S
Sbjct: 363 NMKDLLDKLLKSMDKDGIVPNKRFFLEALGAFLSSTGNSESGS 405
>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 503
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAF-GLKAGTESSDSKINSTT 164
N KEL++KLL +MDKDGIVPNK+FFL+ALGA L A +ES+++ +S T
Sbjct: 408 NQKELLDKLLKHMDKDGIVPNKRFFLDALGAVASLPANSESANAATDSKT 457
>ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like isoform X1 [Solanum tuberosum]
gi|565376411|ref|XP_006354699.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like isoform X2 [Solanum tuberosum]
gi|565376413|ref|XP_006354700.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like isoform X3 [Solanum tuberosum]
Length = 457
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/33 (78%), Positives = 32/33 (96%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFG 212
+MKEL++KLLT MD+DGI+PNKKFFL+ALGAFG
Sbjct: 403 DMKELVQKLLTCMDEDGIIPNKKFFLDALGAFG 435
>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product
[Vitis vinifera]
Length = 489
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLK-AGTESSDSKINSTTELIGAKT 143
+ KEL+EKLL MD DGI+PNK+FFLEALGAFG A ES+ S T AKT
Sbjct: 433 DQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTGLTRPRNSAKT 489
>ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502140047|ref|XP_004504033.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 477
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLKAGTESSDS 182
N KEL++KLL +MDKDG++PNK+FFL+ALGA G + TE S S
Sbjct: 417 NSKELLDKLLKHMDKDGVIPNKRFFLDALGAIG--SSTEKSGS 457
>ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citrus clementina]
gi|568819570|ref|XP_006464322.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Citrus sinensis]
gi|557530062|gb|ESR41312.1| hypothetical protein
CICLE_v10025440mg [Citrus clementina]
Length = 500
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLK-AGTESSDSKINSTTELIGAKT 143
NMKEL++KLL M+++GIVPNK+FFLEAL F AG++S +K + T L AK+
Sbjct: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLSTAKS 500
>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 478
Score = 56.2 bits (134), Expect = 5e-06
Identities = 23/32 (71%), Positives = 31/32 (96%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAF 215
NMK+L++KLL +MD+DGI+PNK+FFL+ALGAF
Sbjct: 431 NMKKLVQKLLKHMDRDGIIPNKRFFLDALGAF 462
>ref|XP_007048085.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|590707730|ref|XP_007048086.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508700346|gb|EOX92242.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508700347|gb|EOX92243.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 488
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = -3
Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFG-LKAGTESSDSKINSTTE 161
NMK+L++KL+ M+KDGIVPNK+FFLEAL AFG L A +S + I E
Sbjct: 427 NMKDLMQKLVKQMEKDGIVPNKRFFLEALEAFGSLPASPDSVSATIGDRPE 477