BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00021035
         (312 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containi...    63   4e-08
ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prun...    62   8e-08
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citr...    60   4e-07
ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,...    58   1e-06
ref|XP_007048085.1| Tetratricopeptide repeat (TPR)-like superfam...    56   5e-06
gb|EXB80843.1| hypothetical protein L484_020101 [Morus notabilis]      55   8e-06

>ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Solanum lycopersicum]
          Length = 478

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 27/33 (81%), Positives = 33/33 (100%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFG 212
           +MKEL++KLLTYMD+DGI+PNKKFFL+ALGAFG
Sbjct: 424 DMKELVQKLLTYMDEDGIIPNKKFFLDALGAFG 456


>ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Glycine max]
          Length = 526

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAF-GLKAGTESSDSKTNSTT 164
           N KEL++KLL +MDKDGI+PNK+FFL+ALGA   L A +ES+++ T+S T
Sbjct: 417 NQKELLDKLLKHMDKDGIIPNKRFFLDALGAVASLPANSESANAATDSNT 466


>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Glycine max]
          Length = 503

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/50 (62%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAF-GLKAGTESSDSKTNSTT 164
           N KEL++KLL +MDKDGIVPNK+FFL+ALGA   L A +ES+++ T+S T
Sbjct: 408 NQKELLDKLLKHMDKDGIVPNKRFFLDALGAVASLPANSESANAATDSKT 457


>ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prunus persica]
           gi|462407886|gb|EMJ13220.1| hypothetical protein
           PRUPE_ppa004899mg [Prunus persica]
          Length = 486

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLKAGTESSDSKT 176
           NMKEL+EKLL  MDKDGIVPNK+FFLEALGAF    G+  S + T
Sbjct: 430 NMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTAT 474


>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera]
           gi|296082481|emb|CBI21486.3| unnamed protein product
           [Vitis vinifera]
          Length = 489

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLK-AGTESSDSKTNSTTELIGAKT 143
           + KEL+EKLL  MD DGI+PNK+FFLEALGAFG   A  ES+ S T  T     AKT
Sbjct: 433 DQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTGLTRPRNSAKT 489


>ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 420

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/43 (67%), Positives = 33/43 (76%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLKAGTESSDS 182
           NMK+L++KLL  MDKDGIVPNK+FFLEALGAF    G   S S
Sbjct: 363 NMKDLLDKLLKSMDKDGIVPNKRFFLEALGAFLSSTGNSESGS 405


>ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565376411|ref|XP_006354699.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565376413|ref|XP_006354700.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 457

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFG 212
           +MKEL++KLLT MD+DGI+PNKKFFL+ALGAFG
Sbjct: 403 DMKELVQKLLTCMDEDGIIPNKKFFLDALGAFG 435


>ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citrus clementina]
           gi|568819570|ref|XP_006464322.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Citrus sinensis]
           gi|557530062|gb|ESR41312.1| hypothetical protein
           CICLE_v10025440mg [Citrus clementina]
          Length = 500

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLK-AGTESSDSKTNSTTELIGAKT 143
           NMKEL++KLL  M+++GIVPNK+FFLEAL  F    AG++S  +KT+ T  L  AK+
Sbjct: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLSTAKS 500


>ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X1 [Cicer arietinum]
           gi|502140047|ref|XP_004504033.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 477

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLKAGTESSDSKTNST 167
           N KEL++KLL +MDKDG++PNK+FFL+ALGA G  + TE S S    T
Sbjct: 417 NSKELLDKLLKHMDKDGVIPNKRFFLDALGAIG--SSTEKSGSANAGT 462


>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 3/48 (6%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAF---GLKAGTESSDSKT 176
           NMK+L++KLL +MD+DGI+PNK+FFL+ALGAF      +G + +++KT
Sbjct: 431 NMKKLVQKLLKHMDRDGIIPNKRFFLDALGAFKSLPASSGNQQNNAKT 478


>ref|XP_007048085.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|590707730|ref|XP_007048086.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508700346|gb|EOX92242.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508700347|gb|EOX92243.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 488

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLKAGTESSDSKTNSTTELIGAKT 143
           NMK+L++KL+  M+KDGIVPNK+FFLEAL AFG    +  S S T        AKT
Sbjct: 427 NMKDLMQKLVKQMEKDGIVPNKRFFLEALEAFGSLPASPDSVSATIGDRPEKSAKT 482


>gb|EXB80843.1| hypothetical protein L484_020101 [Morus notabilis]
          Length = 485

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/49 (57%), Positives = 36/49 (73%)
 Frame = -3

Query: 310 NMKELIEKLLTYMDKDGIVPNKKFFLEALGAFGLKAGTESSDSKTNSTT 164
           NMKEL+  LL +M+KDGIVPNK+FFLEALGAF     +  S S T +++
Sbjct: 429 NMKELLGNLLRHMEKDGIVPNKRFFLEALGAFCSSNASPVSMSATAASS 477