BLASTX nr result

ID: Sinomenium21_contig00020383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00020383
         (736 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]     70   6e-10
gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum...    70   1e-09
gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]        63   1e-07

>gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]
          Length = 562

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 35/57 (61%), Positives = 42/57 (73%)
 Frame = +2

Query: 131 RRGALVQW*ELWPCDIEVMGLSHGNSLLLREVRLLTINPKWSDPSPYPTYAGASCTG 301
           ++G+L    +L PCD EVMG S GNSLL +  RL TI+PKWSDPSP P  AGA+CTG
Sbjct: 351 KKGSLGAVVKLLPCDHEVMGSSPGNSLLQKWERLRTIDPKWSDPSPDPAQAGATCTG 407


>gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum urartu]
          Length = 1047

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 36/57 (63%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = +2

Query: 158 ELWPCDIEVMGLSHGNSLLLR-EVRLLTINPKWSDPSPYPTYAGASCTGLPFMCVYK 325
           EL PCD EV G S GNSLL +   RL TI+ KWSDPSP P  AGA+CTGLPF+ + K
Sbjct: 634 ELLPCDHEVTGSSPGNSLLQKCRDRLRTIDAKWSDPSPDPGQAGATCTGLPFLYILK 690


>gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]
          Length = 1176

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 35/58 (60%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = +2

Query: 137 GALVQW*ELWPCDIEVMGLSHGNSLLLR-EVRLLTINPKWSDPSPYPTYAGASCTGLP 307
           GA+V+   L PCD EV G S GNSLL +    L TI+PKWSDP P P  AGA+CTGLP
Sbjct: 530 GAVVK---LLPCDHEVTGSSPGNSLLQKCREGLRTIDPKWSDPFPDPAQAGATCTGLP 584


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