BLASTX nr result

ID: Sinomenium21_contig00020359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00020359
         (449 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...    67   3e-09
ref|XP_006338377.1| PREDICTED: 54S ribosomal protein L12, mitoch...    65   1e-08
ref|XP_004232170.1| PREDICTED: 50S ribosomal protein L7/L12-like...    63   4e-08
ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitocho...    62   6e-08
ref|XP_007046813.1| 50S ribosomal protein L7/L12, putative [Theo...    61   1e-07
ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Rici...    55   8e-06

>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = +2

Query: 128 SRNSFSDIFRKRNLSIPD-ENFCS--SFARESTAVAGQETKLVPSERVSTLVDDISGLTL 298
           ++N  SD    R+++ P  E F S  S    +   A  E++  PSERVS +VD+ISGLTL
Sbjct: 19  AQNPSSDSPSTRHINFPGLETFASPSSVNHRNYTTASPESRPAPSERVSAIVDEISGLTL 78

Query: 299 LEVADLTEVLRKRLDVNE 352
           LEVADLTEVLR++LDV E
Sbjct: 79  LEVADLTEVLREKLDVKE 96


>ref|XP_006338377.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Solanum
           tuberosum]
          Length = 207

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 50/114 (43%), Positives = 62/114 (54%)
 Frame = +2

Query: 11  RKFMRYLRFISLSRTPIGCSQTSDDLHHVRFLASKSLHLSRNSFSDIFRKRNLSIPDENF 190
           R F R++   SLSR     S       H R   SK   LS+  F   F K  +S    NF
Sbjct: 2   RWFNRFINH-SLSRRSRTISTCQTPYVHSRIPQSKIQKLSKTHFYS-FTKPLIS---SNF 56

Query: 191 CSSFARESTAVAGQETKLVPSERVSTLVDDISGLTLLEVADLTEVLRKRLDVNE 352
            +S          QE+K VPSERVS +VD+ISGLTLLEV+DL EVLRK++ + E
Sbjct: 57  TTS---------AQESKPVPSERVSAIVDEISGLTLLEVSDLGEVLRKKMGIEE 101


>ref|XP_004232170.1| PREDICTED: 50S ribosomal protein L7/L12-like [Solanum lycopersicum]
          Length = 207

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 46/109 (42%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
 Frame = +2

Query: 32  RFIS--LSRTPIGCSQTSDDLHHVRFLASKSLHLSRNSFSDIFRKRNLSIPDENFCSSFA 205
           RFI+  LSR     S       H R   SK  +LS+  F    +    S+   NF +S  
Sbjct: 6   RFINQLLSRRSRTISTYQTPYVHSRIPQSKIQNLSKTHFYSFTK----SLISSNFTTS-- 59

Query: 206 RESTAVAGQETKLVPSERVSTLVDDISGLTLLEVADLTEVLRKRLDVNE 352
                   QE+K  PSERVS +VD+ISGLTLLEV+DL EVLRK++ + E
Sbjct: 60  -------AQESKPAPSERVSAIVDEISGLTLLEVSDLGEVLRKKMGIEE 101


>ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitochondrial [Vitis vinifera]
          Length = 189

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/36 (80%), Positives = 36/36 (100%)
 Frame = +2

Query: 245 VPSERVSTLVDDISGLTLLEVADLTEVLRKRLDVNE 352
           VPSERVS++VD+ISGLTLLEV+DLTE+LRK+LD+NE
Sbjct: 51  VPSERVSSIVDEISGLTLLEVSDLTELLRKKLDINE 86


>ref|XP_007046813.1| 50S ribosomal protein L7/L12, putative [Theobroma cacao]
           gi|508699074|gb|EOX90970.1| 50S ribosomal protein
           L7/L12, putative [Theobroma cacao]
          Length = 196

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/80 (43%), Positives = 50/80 (62%)
 Frame = +2

Query: 113 KSLHLSRNSFSDIFRKRNLSIPDENFCSSFARESTAVAGQETKLVPSERVSTLVDDISGL 292
           K+LH + N  S I     ++        +F+R  T  + + TK  PS +V+ +VD++SGL
Sbjct: 16  KTLHQNPNISSSIQSLNKVN-------HTFSRNYTTPSQESTKQAPSGKVAAIVDELSGL 68

Query: 293 TLLEVADLTEVLRKRLDVNE 352
           TLLEV DLTEVLR++LDV E
Sbjct: 69  TLLEVMDLTEVLRQKLDVKE 88


>ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223539188|gb|EEF40781.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 192

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
 Frame = +2

Query: 86  LHHVRFLASKSLHLSRNSFSDIFRKRNLSIPDENFCSSFAR------ESTAVAGQETKLV 247
           + H R +   S HLSR       RK     P  N  S+  R      + T++A +     
Sbjct: 1   MRHFRLI---SPHLSR------IRKTLFRNPTFNPQSTIPRSPNLIYQFTSIAQEPNPPA 51

Query: 248 PSERVSTLVDDISGLTLLEVADLTEVLRKRLDVNE 352
           PS++V+ LVD+IS LTLLE++DLTEVLR +LD+ E
Sbjct: 52  PSDKVAALVDEISELTLLEISDLTEVLRNKLDIKE 86


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