BLASTX nr result

ID: Sinomenium21_contig00020352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00020352
         (423 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515759.1| Vesicle-associated membrane protein, putativ...    57   3e-06
ref|XP_004974203.1| PREDICTED: vesicle-associated membrane prote...    56   5e-06

>ref|XP_002515759.1| Vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223545087|gb|EEF46598.1| Vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 237

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/30 (76%), Positives = 29/30 (96%)
 Frame = +2

Query: 2   QNLKLKLMVGGALLAVIVILWLMVCRGFKC 91
           QNL++KLM+GGA+L +IVILWL+VCRGFKC
Sbjct: 208 QNLQMKLMIGGAILVLIVILWLLVCRGFKC 237


>ref|XP_004974203.1| PREDICTED: vesicle-associated membrane protein 727-like isoform X1
           [Setaria italica] gi|514798530|ref|XP_004974204.1|
           PREDICTED: vesicle-associated membrane protein 727-like
           isoform X2 [Setaria italica]
          Length = 239

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   QNLKLKLMVGGALLAVIVILWLMVCRGFKC 91
           QNL+ KLMVGGA+ A+I+ILWLMVCRGFKC
Sbjct: 210 QNLRFKLMVGGAIAALILILWLMVCRGFKC 239


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