BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00020268
         (624 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB53573.1| hypothetical protein L484_009313 [Morus notabilis]     196   6e-48
ref|XP_007216509.1| hypothetical protein PRUPE_ppa025580mg, part...   196   6e-48
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   195   1e-47
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   195   1e-47
ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containi...   194   2e-47
ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citr...   194   2e-47
ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Popu...   193   3e-47
ref|XP_006406206.1| hypothetical protein EUTSA_v10020073mg [Eutr...   192   7e-47
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ...   192   7e-47
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   188   1e-45
ref|NP_188854.1| pentatricopeptide repeat-containing protein [Ar...   187   2e-45
ref|XP_006296991.1| hypothetical protein CARUB_v10012985mg [Caps...   184   1e-44
ref|XP_007049050.1| Tetratricopeptide repeat (TPR)-like superfam...   180   3e-43
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...   172   7e-41
ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containi...   170   4e-40
ref|XP_006351208.1| PREDICTED: pentatricopeptide repeat-containi...   166   5e-39
ref|XP_007142548.1| hypothetical protein PHAVU_008G290100g [Phas...   158   1e-36
ref|XP_006576131.1| PREDICTED: pentatricopeptide repeat-containi...   157   3e-36
ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...   156   5e-36
gb|EPS60569.1| hypothetical protein M569_14234, partial [Genlise...   148   1e-33

>gb|EXB53573.1| hypothetical protein L484_009313 [Morus notabilis]
          Length = 820

 Score =  196 bits (497), Expect = 6e-48
 Identities = 103/191 (53%), Positives = 130/191 (68%), Gaps = 1/191 (0%)
 Frame = +3

Query: 54  SASSFIKFTAKTPPPRPSHPNDSSSNPK-PTMRARLSQLCQEGRPDLALRLFDTIPRPNT 230
           S SS    T  T   +P  P  S   PK PT+R+RLS+LCQEG+P LA +LFDT+PRP T
Sbjct: 11  SPSSPATQTPTTTTTQPPSPTISLPKPKTPTIRSRLSKLCQEGKPHLARQLFDTLPRPTT 70

Query: 231 VLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKALH 410
           VLWNTIIIGFICN  P +AL FYA+M  S+  TK DSYTYSS LKACA T   ++G+A+H
Sbjct: 71  VLWNTIIIGFICNNFPDDALLFYAQMKKSAPDTKCDSYTYSSTLKACADTCNARVGRAVH 130

Query: 411 ARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFFRVDLVQRVFDNMPMR 590
             +LR  S  SRI+ NSLLNMYS+CL                ++ + DLV++VFD+MP R
Sbjct: 131 CHVLRCLSNPSRILYNSLLNMYSTCLC-------------GCDYSKGDLVRKVFDSMPKR 177

Query: 591 NVVSWNTMIAW 623
           NVV+WNT+++W
Sbjct: 178 NVVAWNTLVSW 188



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 45/148 (30%), Positives = 75/148 (50%)
 Frame = +3

Query: 177 GRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSS 356
           G  D A ++F      NT +WNT+I G++ N LP EA+  + + I        D  T+ S
Sbjct: 265 GCVDFARKIFYLSVEKNTEIWNTMIGGYVQNNLPVEAMDLFLQAIQLEEAIL-DEVTFLS 323

Query: 357 ALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRES 536
           AL A +  ++L+L + LHA ++++   +   + N+++ MYS C S               
Sbjct: 324 ALTAVSQLQRLELAQQLHAYVIKNLRAIPIFIQNAIIAMYSRCSS--------------- 368

Query: 537 EFFRVDLVQRVFDNMPMRNVVSWNTMIA 620
               +D   ++F  M  R+VVSWNTM++
Sbjct: 369 ----IDKSFKIFHGMLERDVVSWNTMVS 392


>ref|XP_007216509.1| hypothetical protein PRUPE_ppa025580mg, partial [Prunus persica]
           gi|462412659|gb|EMJ17708.1| hypothetical protein
           PRUPE_ppa025580mg, partial [Prunus persica]
          Length = 804

 Score =  196 bits (497), Expect = 6e-48
 Identities = 98/162 (60%), Positives = 118/162 (72%)
 Frame = +3

Query: 138 PTMRARLSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHS 317
           PT+R+RLS+LCQEG+P LA +LFDT+PRP TVLWNTIIIGFICN +P EAL FYA+M  S
Sbjct: 41  PTIRSRLSKLCQEGQPLLARQLFDTLPRPTTVLWNTIIIGFICNNMPNEALLFYAQMKAS 100

Query: 318 SSFTKSDSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPY 497
           S   KSDSYTYSS LKACA TR  K+GKALH  +LR     SRIV NSLLNMYS+C + +
Sbjct: 101 SPHIKSDSYTYSSTLKACADTRNFKMGKALHCHVLRCLPNPSRIVCNSLLNMYSACYNDF 160

Query: 498 FELLEGETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIAW 623
                        ++   DLV+RVFD M  RNVV+WNT+++W
Sbjct: 161 -------------DYSEYDLVRRVFDTMRKRNVVAWNTLVSW 189



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 49/145 (33%), Positives = 75/145 (51%)
 Frame = +3

Query: 186 DLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALK 365
           D A ++FD     NT +WNT+I  ++ N LP EA+    + + S      D  T+ SAL 
Sbjct: 269 DYARKIFDHCLERNTEIWNTMIGAYVQNNLPIEAISLLFQAVKSEQAIL-DEVTFLSALT 327

Query: 366 ACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFF 545
           AC+  +QL+L   LHA I++    +  I+ N+ + MYS C S                  
Sbjct: 328 ACSQFQQLELAGQLHAFIIKHLRVMPVILQNATIVMYSRCNS------------------ 369

Query: 546 RVDLVQRVFDNMPMRNVVSWNTMIA 620
            V++  ++F  MP R+VVSWNTM++
Sbjct: 370 -VEMSFKIFHKMPERDVVSWNTMVS 393



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
 Frame = +3

Query: 156 LSQLCQEGRPDLALRLFDT--IPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFT 329
           +    + G   +A R+F T      +   WN++I G+  NGL  EA   + +M+  +   
Sbjct: 461 IDMYAKSGSVRIAERIFKTEYTHDRDQATWNSMIAGYTQNGLTEEAFVVFRQMLEQNLIP 520

Query: 330 KSDSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELL 509
             ++ T +S L AC     + +GK LHA  +R Y   +  VG +L+++YS C +      
Sbjct: 521 --NAVTLASILPACNPVGNIDMGKQLHAFSIRQYLDQNVFVGTALIDVYSKCGA------ 572

Query: 510 EGETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMI 617
                        +   + VF     +N V++ TMI
Sbjct: 573 -------------ITYAENVFTGTHEKNSVTYTTMI 595


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  195 bits (495), Expect = 1e-47
 Identities = 112/211 (53%), Positives = 138/211 (65%), Gaps = 4/211 (1%)
 Frame = +3

Query: 3   ASSNSPHPHLHHRRNSSSASSFIKFTAKTP--PPRPSHPNDSSSNPKPTMRARLSQLCQE 176
           AS+  PHP      ++++A+   + T+  P  PP+P           PT+R+RLS LC++
Sbjct: 2   ASAALPHPVSPPSPHATTATPAHEPTSLPPKTPPKP-----------PTIRSRLSHLCRQ 50

Query: 177 GRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSS 356
           G P  AL LFD+IPRP TVLWNTIIIGFICN +P +AL FYARM  +S   K DSYT+SS
Sbjct: 51  GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARM-RASPSPKFDSYTFSS 109

Query: 357 ALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLS--PYFELLEGETGRR 530
            LKACA  R LKLGKALH  +LRS+   SRIV NSLLNMYS+CL+  PY           
Sbjct: 110 TLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYL--------GT 161

Query: 531 ESEFFRVDLVQRVFDNMPMRNVVSWNTMIAW 623
             +F   DLV+RVFD M  RNVV+WNTMI+W
Sbjct: 162 AYDFNNCDLVRRVFDTMRKRNVVAWNTMISW 192



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 51/148 (34%), Positives = 79/148 (53%)
 Frame = +3

Query: 177 GRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSS 356
           G  D A  +FD     NT +WNT+I G++ N  P EA+  + +++ S  F   D  T+ S
Sbjct: 269 GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDD-VTFLS 327

Query: 357 ALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRES 536
           AL A +  + L+LG+ LHA IL+S + L  ++ N+++ MYS C S               
Sbjct: 328 ALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGS--------------- 372

Query: 537 EFFRVDLVQRVFDNMPMRNVVSWNTMIA 620
               +    +VF NM  R+VV+WNTM++
Sbjct: 373 ----IGTSFKVFSNMLERDVVTWNTMVS 396


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  195 bits (495), Expect = 1e-47
 Identities = 112/211 (53%), Positives = 138/211 (65%), Gaps = 4/211 (1%)
 Frame = +3

Query: 3   ASSNSPHPHLHHRRNSSSASSFIKFTAKTP--PPRPSHPNDSSSNPKPTMRARLSQLCQE 176
           AS+  PHP      ++++A+   + T+  P  PP+P           PT+R+RLS LC++
Sbjct: 2   ASAALPHPVSPPSPHATTATPAHEPTSLPPKTPPKP-----------PTIRSRLSHLCRQ 50

Query: 177 GRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSS 356
           G P  AL LFD+IPRP TVLWNTIIIGFICN +P +AL FYARM  +S   K DSYT+SS
Sbjct: 51  GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARM-RASPSPKFDSYTFSS 109

Query: 357 ALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLS--PYFELLEGETGRR 530
            LKACA  R LKLGKALH  +LRS+   SRIV NSLLNMYS+CL+  PY           
Sbjct: 110 TLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYL--------GT 161

Query: 531 ESEFFRVDLVQRVFDNMPMRNVVSWNTMIAW 623
             +F   DLV+RVFD M  RNVV+WNTMI+W
Sbjct: 162 AYDFNNCDLVRRVFDTMRKRNVVAWNTMISW 192



 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 51/148 (34%), Positives = 78/148 (52%)
 Frame = +3

Query: 177 GRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSS 356
           G  D A  +FD     NT +WNT+I G++ N  P EA+  + +++ S  F   D  T+ S
Sbjct: 269 GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDD-VTFLS 327

Query: 357 ALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRES 536
           AL A +  + L LG+ LHA IL+S + L  ++ N+++ MYS C S               
Sbjct: 328 ALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGS--------------- 372

Query: 537 EFFRVDLVQRVFDNMPMRNVVSWNTMIA 620
               +    +VF NM  R+VV+WNTM++
Sbjct: 373 ----IGTSFKVFSNMLERDVVTWNTMVS 396


>ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Citrus sinensis]
          Length = 833

 Score =  194 bits (492), Expect = 2e-47
 Identities = 100/185 (54%), Positives = 129/185 (69%), Gaps = 6/185 (3%)
 Frame = +3

Query: 87  TPPPRPSHPNDSSSNPK------PTMRARLSQLCQEGRPDLALRLFDTIPRPNTVLWNTI 248
           TPPP P  P   S +P       PT+R+RLS++CQEGRP LA +LFD+I RP TV+WNTI
Sbjct: 18  TPPP-PQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTI 76

Query: 249 IIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKALHARILRS 428
           IIGF+CN LP EA+  Y++M  SS +T  D+YTYSS LKACA TR L++GKA+H   +R 
Sbjct: 77  IIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC 136

Query: 429 YSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFFRVDLVQRVFDNMPMRNVVSWN 608
           +S  SR V NSLLNMYS+CLS     + G     E ++ + DLV +VFD M  RNVV+WN
Sbjct: 137 FSNPSRFVYNSLLNMYSTCLSSLDAEMVG-LKYVEVDYSKYDLVCKVFDTMRRRNVVAWN 195

Query: 609 TMIAW 623
           T+++W
Sbjct: 196 TIVSW 200



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 49/145 (33%), Positives = 76/145 (52%)
 Frame = +3

Query: 186 DLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALK 365
           D A ++FD     NT +WNT+I G++ N  P EA+  + + +        D  T+ SAL 
Sbjct: 280 DFARKIFDICLERNTEVWNTMIGGYVQNHRPVEAIELFIQALELDEIV-FDDVTFLSALS 338

Query: 366 ACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFF 545
           A +  ++L LG+ LHA I++++  L  IV N+++ MYS C S +                
Sbjct: 339 AVSHLQELDLGQQLHAYIIKNFVALPVIVLNAVIVMYSRCNSIHTSF------------- 385

Query: 546 RVDLVQRVFDNMPMRNVVSWNTMIA 620
                 +VF+ M  R+VVSWNTMI+
Sbjct: 386 ------KVFEKMQERDVVSWNTMIS 404


>ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citrus clementina]
           gi|557531841|gb|ESR43024.1| hypothetical protein
           CICLE_v10011066mg [Citrus clementina]
          Length = 833

 Score =  194 bits (492), Expect = 2e-47
 Identities = 100/185 (54%), Positives = 129/185 (69%), Gaps = 6/185 (3%)
 Frame = +3

Query: 87  TPPPRPSHPNDSSSNPK------PTMRARLSQLCQEGRPDLALRLFDTIPRPNTVLWNTI 248
           TPPP P  P   S +P       PT+R+RLS++CQEGRP LA +LFD+I RP TV+WNTI
Sbjct: 18  TPPP-PQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTI 76

Query: 249 IIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKALHARILRS 428
           IIGF+CN LP EA+  Y++M  SS +T  D+YTYSS LKACA TR L++GKA+H   +R 
Sbjct: 77  IIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC 136

Query: 429 YSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFFRVDLVQRVFDNMPMRNVVSWN 608
           +S  SR V NSLLNMYS+CLS     + G     E ++ + DLV +VFD M  RNVV+WN
Sbjct: 137 FSNPSRFVYNSLLNMYSTCLSSLDAEMVG-LKYVEVDYSKYDLVCKVFDTMRRRNVVAWN 195

Query: 609 TMIAW 623
           T+++W
Sbjct: 196 TIVSW 200



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 49/145 (33%), Positives = 76/145 (52%)
 Frame = +3

Query: 186 DLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALK 365
           D A ++FD     NT +WNT+I G++ N  P EA+  + + +        D  T+ SAL 
Sbjct: 280 DFARKIFDICLERNTEVWNTMIGGYVQNNRPVEAIELFIQALELDEIV-FDDVTFLSALS 338

Query: 366 ACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFF 545
           A +  ++L LG+ LHA I++++  L  IV N+++ MYS C S +                
Sbjct: 339 AVSHLQELDLGQQLHAYIIKNFVALPVIVLNAVIVMYSRCNSIHTSF------------- 385

Query: 546 RVDLVQRVFDNMPMRNVVSWNTMIA 620
                 +VF+ M  R+VVSWNTMI+
Sbjct: 386 ------KVFEKMQERDVVSWNTMIS 404


>ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Populus trichocarpa]
           gi|550335185|gb|EEE92296.2| hypothetical protein
           POPTR_0006s00960g [Populus trichocarpa]
          Length = 820

 Score =  193 bits (491), Expect = 3e-47
 Identities = 105/203 (51%), Positives = 135/203 (66%), Gaps = 11/203 (5%)
 Frame = +3

Query: 48  SSSASSFIKFTAKTPPPRPSH-----------PNDSSSNPKPTMRARLSQLCQEGRPDLA 194
           +S++SS +     TP   PS+           P  S S   P++R+RLS+LCQEG+P +A
Sbjct: 2   ASTSSSSLPIPLSTPSHDPSNKTQKTSLFRISPPPSPSLKTPSIRSRLSKLCQEGQPHIA 61

Query: 195 LRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALKACA 374
           L+LFDT PRP TV+ NTIIIGFICN LP EA+ FY+++  SS  TK DSYTYSS LKACA
Sbjct: 62  LQLFDTFPRPTTVICNTIIIGFICNNLPLEAILFYSKLKSSSLGTKFDSYTYSSTLKACA 121

Query: 375 ATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFFRVD 554
            TR LK+G+A+H  ++R  S  SRIV NSLLNMYSSCLS    L          ++ + D
Sbjct: 122 ETRSLKIGRAIHCHLIRCLSNPSRIVYNSLLNMYSSCLSNVGCL-------SYLDYSKYD 174

Query: 555 LVQRVFDNMPMRNVVSWNTMIAW 623
           LV +VFD M  R+VV+WNTM++W
Sbjct: 175 LVHKVFDTMRKRDVVAWNTMVSW 197



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 43/148 (29%), Positives = 72/148 (48%)
 Frame = +3

Query: 177 GRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSS 356
           G  D A ++FD     NT +WNT+I G++ N L  E +  + + + +   T  D  T+ S
Sbjct: 274 GHIDFARKVFDHCLEKNTEIWNTMIGGYVQNNLLIEGIDLFLKAVETEQ-TVLDDVTFLS 332

Query: 357 ALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRES 536
            L A +  + L L +  HA ++++ +    ++ N+++ MYS C S +             
Sbjct: 333 VLTAVSQLQCLDLAQQQHAFVIKNLAVFPVMITNAIIVMYSRCNSVHTSF---------- 382

Query: 537 EFFRVDLVQRVFDNMPMRNVVSWNTMIA 620
                     VF+ M  R+VVSWNTMI+
Sbjct: 383 ---------EVFEKMVERDVVSWNTMIS 401


>ref|XP_006406206.1| hypothetical protein EUTSA_v10020073mg [Eutrema salsugineum]
           gi|557107352|gb|ESQ47659.1| hypothetical protein
           EUTSA_v10020073mg [Eutrema salsugineum]
          Length = 825

 Score =  192 bits (488), Expect = 7e-47
 Identities = 98/186 (52%), Positives = 127/186 (68%), Gaps = 6/186 (3%)
 Frame = +3

Query: 84  KTPPPRPSHPNDSSSNPK-----PTMRARLSQLCQEGRPDLALRLFDTIPRPNTVLWNTI 248
           ++PP   +  + S S P      P++R+RLS++CQ+G P LA +LFD IP+P TVLWNTI
Sbjct: 17  QSPPQNQTRHSSSFSPPNLTPQTPSIRSRLSRICQDGNPQLARQLFDAIPKPTTVLWNTI 76

Query: 249 IIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKALHARILRS 428
           IIGFICN LP EAL FY+RM  ++ FTK D YTYSS LKACA TR LK GKA+H  ++R 
Sbjct: 77  IIGFICNNLPHEALLFYSRMKKTAPFTKCDPYTYSSTLKACAETRNLKAGKAVHCHLIRC 136

Query: 429 YSKLSRIVGNSLLNMYSSCL-SPYFELLEGETGRRESEFFRVDLVQRVFDNMPMRNVVSW 605
               SR+V NSL+NMY SCL +P  EL   +           D+V++VFDNM  +NVV+W
Sbjct: 137 LQNSSRVVHNSLMNMYVSCLNAPVSELDSSD----------YDVVRKVFDNMRRKNVVAW 186

Query: 606 NTMIAW 623
           NT+I+W
Sbjct: 187 NTLISW 192



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 46/155 (29%), Positives = 77/155 (49%)
 Frame = +3

Query: 156 LSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKS 335
           +S   + G  + + R+F++    N  +WNT+I   + N    E++  +   + S     S
Sbjct: 262 ISMYAELGDLESSRRVFESCVERNIEVWNTMIGVCVQNDYLVESIDLFLEAVGSKEIV-S 320

Query: 336 DSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEG 515
           D  T+  A  A +A +Q++LG+  H  + + + +L  ++ NSL+ MYS C S +      
Sbjct: 321 DEVTFLLAASAVSALQQVELGRQFHGFVSKKFQELPIVIFNSLMVMYSRCGSVH------ 374

Query: 516 ETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIA 620
                  E F       VFD+M  R+VVSWNTMI+
Sbjct: 375 -------ESF------GVFDSMRERDVVSWNTMIS 396


>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329184|gb|EFH59603.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 824

 Score =  192 bits (488), Expect = 7e-47
 Identities = 98/193 (50%), Positives = 124/193 (64%), Gaps = 15/193 (7%)
 Frame = +3

Query: 90  PPPRPSHPNDSSSNPK---------------PTMRARLSQLCQEGRPDLALRLFDTIPRP 224
           PPP P      S N                 P++R+RLS++CQEG P LA +LFD IP+P
Sbjct: 9   PPPPPLSLQSPSQNQTRHSSTFSPPTLTPQTPSIRSRLSKICQEGNPQLARQLFDAIPKP 68

Query: 225 NTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKA 404
            TVLWNTIIIGFICN LP EAL FY+RM  ++ FTK D+YTYSS LKACA T+ LK GKA
Sbjct: 69  TTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKACAETKNLKAGKA 128

Query: 405 LHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFFRVDLVQRVFDNMP 584
           +H  ++R     SR+V NSL+NMY SCL+             E + F  D+V++VFDNM 
Sbjct: 129 VHCHLIRCLQNSSRVVHNSLMNMYVSCLN---------APGSELDCFEYDVVRKVFDNMR 179

Query: 585 MRNVVSWNTMIAW 623
            +NVV+WNT+I+W
Sbjct: 180 RKNVVAWNTLISW 192



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 45/155 (29%), Positives = 76/155 (49%)
 Frame = +3

Query: 156 LSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKS 335
           +S   + G  + + R+FD+    N  +WNT+I  ++ N    E++  +   I S     S
Sbjct: 262 ISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIV-S 320

Query: 336 DSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEG 515
           D  T+  A  A +  +Q++LG+  H  + +++ +L  ++ NSL+ MYS C          
Sbjct: 321 DEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRC---------- 370

Query: 516 ETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIA 620
             G  +  F        VF +M  R+VVSWNTMI+
Sbjct: 371 --GFVQKSF-------GVFHSMRERDVVSWNTMIS 396



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 42/144 (29%), Positives = 67/144 (46%)
 Frame = +3

Query: 186 DLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALK 365
           D+  ++FD + R N V WNT+I  ++  G   EA R +A M+      K    ++ +   
Sbjct: 169 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRME--IKPSPVSFVNVFP 226

Query: 366 ACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFF 545
           A A +R +K     +  +L+   +  +      L + SS +S Y EL + E+ R      
Sbjct: 227 AVATSRSIKKANVFYGLMLKLGDEYVKD-----LFVVSSAISMYAELGDLESSR------ 275

Query: 546 RVDLVQRVFDNMPMRNVVSWNTMI 617
                 RVFD+   RN+  WNTMI
Sbjct: 276 ------RVFDSCVERNIEVWNTMI 293


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  188 bits (478), Expect = 1e-45
 Identities = 103/182 (56%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
 Frame = +3

Query: 81  AKTPPPRPSHPNDSSSNPK-PTMRARLSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIG 257
           +++P   P H +  S+NPK PT+R RLS+LCQEG+  LA +LFD +PRP+TVLWNTIIIG
Sbjct: 11  SQSPSHLPLHTH--STNPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIG 68

Query: 258 FICNGLPREALRFYARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKALHARILRSYSK 437
            +CN  P EAL FY+ M  SS   K DSYTYSS LKACA TR L +GKA+HA  LR    
Sbjct: 69  LVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMN 128

Query: 438 LSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMI 617
            SRIV NSLLNMYS C S          G+  S + R DLV++VFD M  R VV+WNT+I
Sbjct: 129 PSRIVYNSLLNMYSMCSS------TTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLI 182

Query: 618 AW 623
           AW
Sbjct: 183 AW 184



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 44/145 (30%), Positives = 74/145 (51%)
 Frame = +3

Query: 186 DLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALK 365
           + A ++FD     NT +WNT+I  F+ N    E ++ + + + S      D  T  SA+ 
Sbjct: 264 EFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESED-AAIDEVTLLSAIS 322

Query: 366 ACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFF 545
           A +  ++ +L + LHA ++++ +     V N+L+ MYS C S                  
Sbjct: 323 AASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNS------------------ 364

Query: 546 RVDLVQRVFDNMPMRNVVSWNTMIA 620
            +D   ++FDNMP ++VVSWNTMI+
Sbjct: 365 -IDTSFKIFDNMPEKDVVSWNTMIS 388


>ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
           gi|11994734|dbj|BAB03063.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|110739449|dbj|BAF01634.1| hypothetical protein
           [Arabidopsis thaliana] gi|332643073|gb|AEE76594.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 820

 Score =  187 bits (476), Expect = 2e-45
 Identities = 95/193 (49%), Positives = 122/193 (63%), Gaps = 15/193 (7%)
 Frame = +3

Query: 90  PPPRPSHPNDSSSNPK---------------PTMRARLSQLCQEGRPDLALRLFDTIPRP 224
           PPP P      S N                 P++R+RLS++CQ+G P LA +LFD IP+P
Sbjct: 9   PPPPPLSLQSPSQNQTRHSSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKP 68

Query: 225 NTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKA 404
            TVLWNTIIIGFICN LP EAL FY+RM  ++ FT  D+YTYSS LKACA T+ LK GKA
Sbjct: 69  TTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKA 128

Query: 405 LHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFFRVDLVQRVFDNMP 584
           +H  ++R     SR+V NSL+NMY SCL+               + F  D+V++VFDNM 
Sbjct: 129 VHCHLIRCLQNSSRVVHNSLMNMYVSCLN-------------APDCFEYDVVRKVFDNMR 175

Query: 585 MRNVVSWNTMIAW 623
            +NVV+WNT+I+W
Sbjct: 176 RKNVVAWNTLISW 188



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 46/155 (29%), Positives = 76/155 (49%)
 Frame = +3

Query: 156 LSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKS 335
           +S   + G  + + R+FD+    N  +WNT+I  ++ N    E++  +   I S     S
Sbjct: 258 ISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIV-S 316

Query: 336 DSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEG 515
           D  TY  A  A +A +Q++LG+  H  + +++ +L  ++ NSL+ MYS C S +      
Sbjct: 317 DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSF--- 373

Query: 516 ETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIA 620
                            VF +M  R+VVSWNTMI+
Sbjct: 374 ----------------GVFLSMRERDVVSWNTMIS 392


>ref|XP_006296991.1| hypothetical protein CARUB_v10012985mg [Capsella rubella]
           gi|565478704|ref|XP_006296992.1| hypothetical protein
           CARUB_v10012985mg [Capsella rubella]
           gi|482565700|gb|EOA29889.1| hypothetical protein
           CARUB_v10012985mg [Capsella rubella]
           gi|482565701|gb|EOA29890.1| hypothetical protein
           CARUB_v10012985mg [Capsella rubella]
          Length = 824

 Score =  184 bits (468), Expect = 1e-44
 Identities = 93/193 (48%), Positives = 126/193 (65%), Gaps = 15/193 (7%)
 Frame = +3

Query: 90  PPPRPSHPNDSSSNPK---------------PTMRARLSQLCQEGRPDLALRLFDTIPRP 224
           PPP P      S N                 P++R+RLS++CQ+G P LA +LFD IP+P
Sbjct: 9   PPPPPLSLQSPSQNQTRHSSTFSPPTLPPQTPSIRSRLSKICQDGNPQLARQLFDAIPKP 68

Query: 225 NTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKA 404
            TVLWNTIIIGFICN + +EAL FY+RM  ++ FTK D+YTYSS LKACA T+ L+ GKA
Sbjct: 69  TTVLWNTIIIGFICNSMSQEALLFYSRMKKTAPFTKCDAYTYSSTLKACAETKNLRAGKA 128

Query: 405 LHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFFRVDLVQRVFDNMP 584
           +H  ++R     SR+V NSL+NMY SC       ++  +G  +S   + D+V++VFDNM 
Sbjct: 129 VHCHLIRCLQNSSRVVHNSLMNMYVSC-------VDAPSGELDSS--KYDVVRKVFDNMR 179

Query: 585 MRNVVSWNTMIAW 623
            +NVV+WNT+I+W
Sbjct: 180 RKNVVAWNTLISW 192



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 46/155 (29%), Positives = 77/155 (49%)
 Frame = +3

Query: 156 LSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKS 335
           +S   + G  + + R+FD+    N  +WNT+I  ++ N    E++  +   + S     S
Sbjct: 262 ISMYAELGDFESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAVGSEEIV-S 320

Query: 336 DSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEG 515
           D  T+  A  A +A +Q++LG+  H  + + + +L  ++ NSL+ MYS C S +      
Sbjct: 321 DEVTFLLAASAVSALQQVELGRQFHGFVSKKFRELPIVIFNSLMVMYSRCGSVH------ 374

Query: 516 ETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIA 620
                  E F       VF +M  R+VVSWNTMI+
Sbjct: 375 -------ESF------GVFHSMRERDVVSWNTMIS 396


>ref|XP_007049050.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508701311|gb|EOX93207.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 923

 Score =  180 bits (457), Expect = 3e-43
 Identities = 100/207 (48%), Positives = 131/207 (63%)
 Frame = +3

Query: 3   ASSNSPHPHLHHRRNSSSASSFIKFTAKTPPPRPSHPNDSSSNPKPTMRARLSQLCQEGR 182
           A +N+P   L H   +  +S         PPP P+          PT+R+RLSQLCQ+G 
Sbjct: 118 APNNNPFHALSHSSQTIISS---------PPPNPTLRT-------PTIRSRLSQLCQQGH 161

Query: 183 PDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSAL 362
           P LA ++FDTI  P TVLWNTI+IGFICN +P+EAL FY+ M +SS  TK DSYTYSS L
Sbjct: 162 PHLARQIFDTIAEPKTVLWNTIVIGFICNNMPQEALLFYSHMKNSSPHTKCDSYTYSSVL 221

Query: 363 KACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEF 542
           KACA  R L++GKA+H   +R  +  SRIV N+LLN Y++CLS   +  E     +  + 
Sbjct: 222 KACALLRNLRIGKAVHCHFIRGLTNPSRIVYNALLNFYATCLSS-SDNKEMGGYIKGFDH 280

Query: 543 FRVDLVQRVFDNMPMRNVVSWNTMIAW 623
            + DLV  VF+ M  R+VV+WNTMI+W
Sbjct: 281 SKHDLVCAVFNMMRKRDVVAWNTMISW 307



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 51/145 (35%), Positives = 77/145 (53%)
 Frame = +3

Query: 186 DLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALK 365
           D A ++FD   + N  +WNT+I G++ N  P E ++ + + + S   T  D  T+ SAL 
Sbjct: 387 DFARKIFDNCSQGNIEIWNTMIGGYLQNNCPVEGIKLFLQAMESE--TVFDDVTFLSALS 444

Query: 366 ACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFF 545
           A +  + L L + LHA I+++ SKL  IV N++L MYS C S +                
Sbjct: 445 AVSQLQWLDLAQQLHAYIIKNLSKLPVIVANAILVMYSRCNSIHTSF------------- 491

Query: 546 RVDLVQRVFDNMPMRNVVSWNTMIA 620
                  VFD MP R+V+SWNTM++
Sbjct: 492 ------EVFDKMPERDVISWNTMVS 510


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  172 bits (436), Expect = 7e-41
 Identities = 91/156 (58%), Positives = 106/156 (67%)
 Frame = +3

Query: 156 LSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKS 335
           L +LCQEG+  LA +LFD +PRP+TVLWNTIIIG +CN  P EAL FY+ M  SS   K 
Sbjct: 11  LCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKC 70

Query: 336 DSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEG 515
           DSYTYSS LKACA TR L +GKA+HA  LR     SRIV NSLLNMYS C S        
Sbjct: 71  DSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSS------TT 124

Query: 516 ETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIAW 623
             G+  S + R DLV++VFD M  R VV+WNT+IAW
Sbjct: 125 PDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAW 160



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 44/145 (30%), Positives = 74/145 (51%)
 Frame = +3

Query: 186 DLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALK 365
           + A ++FD     NT +WNT+I  F+ N    E ++ + + + S      D  T  SA+ 
Sbjct: 240 EFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESED-AAIDEVTLLSAIS 298

Query: 366 ACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFF 545
           A +  ++ +L + LHA ++++ +     V N+L+ MYS C S                  
Sbjct: 299 AASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNS------------------ 340

Query: 546 RVDLVQRVFDNMPMRNVVSWNTMIA 620
            +D   ++FDNMP ++VVSWNTMI+
Sbjct: 341 -IDTSFKIFDNMPEKDVVSWNTMIS 364


>ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Solanum lycopersicum]
          Length = 835

 Score =  170 bits (430), Expect = 4e-40
 Identities = 92/169 (54%), Positives = 119/169 (70%), Gaps = 1/169 (0%)
 Frame = +3

Query: 120 SSSNPKPTMRARLSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFY 299
           + S P+ T+R RLS+LC++G+P LA +LFDTIP+P+TVLWNTIIIGF+CN +P EA+ FY
Sbjct: 48  TDSKPR-TIRFRLSELCRQGQPHLARQLFDTIPQPSTVLWNTIIIGFVCNNMPHEAISFY 106

Query: 300 ARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYS 479
           +R+ H  S +  D YTYSS LKACA T+ +++GKA+H  ILRS    SRIV NSLLNMYS
Sbjct: 107 SRLKHVGS-SVCDQYTYSSVLKACAETKLIRVGKAVHCHILRSGIHPSRIVSNSLLNMYS 165

Query: 480 -SCLSPYFELLEGETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIAW 623
            +CL+    L  G            DLV+RVF  M  RNVV+WNT+ +W
Sbjct: 166 ATCLT----LNNGS---------ECDLVERVFRTMRKRNVVAWNTIFSW 201



 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 43/157 (27%), Positives = 75/157 (47%)
 Frame = +3

Query: 150 ARLSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFT 329
           A +    + G  D A R+F+     NT +WN++I G+I N  P +A+  +   + +    
Sbjct: 269 AAIVMYAELGCVDFATRIFENTCERNTEIWNSMISGYIQNNFPLKAVDLFLEAVEAEDAV 328

Query: 330 KSDSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELL 509
            +D  T+ SAL A +  + L+  + LHA +++ Y     I  N+++  YS C        
Sbjct: 329 TTDDVTFVSALMATSQLQHLEFAQQLHACLIKKYRDSQVISLNAMIATYSRC-------- 380

Query: 510 EGETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIA 620
                    + F      +VF+ M  R++VSWNTM++
Sbjct: 381 -----NHVGDSF------KVFNGMKERDIVSWNTMVS 406


>ref|XP_006351208.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like, partial [Solanum tuberosum]
          Length = 831

 Score =  166 bits (420), Expect = 5e-39
 Identities = 90/168 (53%), Positives = 115/168 (68%)
 Frame = +3

Query: 120 SSSNPKPTMRARLSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFY 299
           + S P+ T+R RLS+LC++G+P LA +LFDTIP+P+TVLWNTIIIGF+CN +P EA+ FY
Sbjct: 46  ADSKPR-TIRFRLSELCRQGQPHLARQLFDTIPQPSTVLWNTIIIGFVCNNMPHEAISFY 104

Query: 300 ARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYS 479
           +R+ H  S +  D Y+YSS LKACA T+++  GKA+H  ILRS    SRIV NSLLNMYS
Sbjct: 105 SRLKHVGS-SVCDQYSYSSVLKACAETKRILEGKAVHCHILRSGIHPSRIVSNSLLNMYS 163

Query: 480 SCLSPYFELLEGETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIAW 623
           +     F L  G            DLV+RVF  M  RNVV WNT+ +W
Sbjct: 164 ATC---FTLDNGSD---------CDLVERVFRTMRKRNVVGWNTIFSW 199



 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 42/145 (28%), Positives = 72/145 (49%)
 Frame = +3

Query: 186 DLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALK 365
           DLA R+F+     NT +WN++I G+I N  P +A+  +   + +     +D  T+ SAL 
Sbjct: 279 DLATRIFENTCERNTEIWNSMISGYIQNNFPLKAVDLFLEAVEAEDAVTTDDVTFVSALM 338

Query: 366 ACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFF 545
           A +  + L+  + LHA +++       I  N+++  YS C              R  + F
Sbjct: 339 ATSQLQHLEFAQQLHACLIKKCRDSQVISLNAMIATYSRC-------------NRVGDSF 385

Query: 546 RVDLVQRVFDNMPMRNVVSWNTMIA 620
                 +VF+ M  R++VSWNTM++
Sbjct: 386 ------KVFNGMKERDIVSWNTMVS 404


>ref|XP_007142548.1| hypothetical protein PHAVU_008G290100g [Phaseolus vulgaris]
           gi|561015681|gb|ESW14542.1| hypothetical protein
           PHAVU_008G290100g [Phaseolus vulgaris]
          Length = 802

 Score =  158 bits (400), Expect = 1e-36
 Identities = 84/161 (52%), Positives = 108/161 (67%)
 Frame = +3

Query: 141 TMRARLSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSS 320
           T+R RLS+LCQ+G+P LA  L D++PR +T +WNT+IIGFICN +P EAL+ YA M    
Sbjct: 26  TIRTRLSKLCQQGQPQLARHLLDSLPRASTAVWNTVIIGFICNKMPLEALQLYAEMKWRR 85

Query: 321 SFTKSDSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYF 500
           + T SD YT+SS +KACA T+ L  GKALH   LRS S  SR+V NSLLNMYS+CL P+ 
Sbjct: 86  N-TASDGYTFSSTMKACALTQNLIAGKALHCHFLRSQSN-SRVVYNSLLNMYSACLPPFA 143

Query: 501 ELLEGETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIAW 623
              +             D V ++FD M  RNVV+WNT+I+W
Sbjct: 144 TQPQH------------DYVLKLFDVMRKRNVVAWNTLISW 172



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 46/144 (31%), Positives = 72/144 (50%)
 Frame = +3

Query: 186 DLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALK 365
           D A  +FD     NT +WNT+I G++ N  P + +  + R + S      D  T+ S + 
Sbjct: 249 DYARVVFDRCSGKNTEVWNTMIGGYVQNNCPLQGIDVFVRALESEEAV-CDDVTFLSVIS 307

Query: 366 ACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFF 545
           A +  +Q+KL + +HA +L+S +    IV N+++ MYS C S                  
Sbjct: 308 AVSQLQQIKLAQQIHAFVLKSLAVTPIIVVNAIIVMYSRCSS------------------ 349

Query: 546 RVDLVQRVFDNMPMRNVVSWNTMI 617
            VD   +VF+ M  R+ VSWNT+I
Sbjct: 350 -VDTSFKVFEKMSERDGVSWNTII 372


>ref|XP_006576131.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Glycine max]
          Length = 752

 Score =  157 bits (396), Expect = 3e-36
 Identities = 85/161 (52%), Positives = 109/161 (67%)
 Frame = +3

Query: 141 TMRARLSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSS 320
           ++R+RLS+LCQ+G+P LA  L DT+PR ++ +WNT+IIGFICN +P EAL  YA M  SS
Sbjct: 27  SIRSRLSKLCQQGQPHLARHLLDTLPRASSAVWNTVIIGFICNHMPLEALHLYAEM-KSS 85

Query: 321 SFTKSDSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYF 500
             T SD YT+SS LKAC+ T+ L  GKA+H+  LRS S  SRIV NSLLNMYS CL P  
Sbjct: 86  PDTPSDCYTFSSTLKACSLTQNLLAGKAIHSHFLRSQSN-SRIVYNSLLNMYSVCLPP-- 142

Query: 501 ELLEGETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMIAW 623
                      +   ++D V +VF  M  RNVV+WNT+I+W
Sbjct: 143 ----------STVQSQLDYVLKVFAFMRKRNVVAWNTLISW 173



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 49/145 (33%), Positives = 74/145 (51%)
 Frame = +3

Query: 186 DLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALK 365
           D A  +FD     NT +WNT+I G++ N  P + +  + R + S      D  T+ S + 
Sbjct: 250 DYARMVFDRCSNKNTEVWNTMIGGYVQNNCPLQGIDVFLRALESEEAV-CDEVTFLSVIC 308

Query: 366 ACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFF 545
           A +  +Q+KL + LHA +L+S +    IV N+++ MYS C                    
Sbjct: 309 AVSLLQQIKLAQQLHAFVLKSLAVTPVIVVNAIMVMYSRCNF------------------ 350

Query: 546 RVDLVQRVFDNMPMRNVVSWNTMIA 620
            VD   +VFDNMP R+ VSWNT+I+
Sbjct: 351 -VDTSLKVFDNMPQRDAVSWNTIIS 374


>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  156 bits (394), Expect = 5e-36
 Identities = 88/191 (46%), Positives = 114/191 (59%), Gaps = 14/191 (7%)
 Frame = +3

Query: 87  TPPPRPSH--PNDSSSNPKP--------TMRARLSQLCQEGRPDLALRLFDTIPRPNTVL 236
           T PP   H  PN      +         ++R+RLS+LC+EG+P LAL L D++PRP+TV+
Sbjct: 23  THPPNQIHTLPNQKQKQKQKQWNKAISTSIRSRLSKLCREGQPHLALHLLDSLPRPSTVV 82

Query: 237 WNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSSALKACAATRQLKLGKALHAR 416
           WN++IIGFICN LP +AL  YA+M  +SS +  D YT+SS LKACA T+ +  GKA+H+ 
Sbjct: 83  WNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDILTGKAIHSH 142

Query: 417 ILRSYSKL----SRIVGNSLLNMYSSCLSPYFELLEGETGRRESEFFRVDLVQRVFDNMP 584
            LRS+S      SRIV NSLLNMY+SC   Y                       VFD M 
Sbjct: 143 FLRSHSNTNTGPSRIVYNSLLNMYASCQHEY--------------------ALNVFDVMR 182

Query: 585 MRNVVSWNTMI 617
            RNVV+WNT+I
Sbjct: 183 RRNVVAWNTLI 193



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 46/148 (31%), Positives = 71/148 (47%)
 Frame = +3

Query: 177 GRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKSDSYTYSS 356
           G  D A  +FD     NT +WNT+I+ ++ N  P EA+  + + + S      D  T  S
Sbjct: 272 GCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGV-CDDVTLLS 330

Query: 357 ALKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRES 536
            L A +  +Q+KL +  HA +++S      I+ N+++ MYS C                 
Sbjct: 331 VLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRC----------------- 373

Query: 537 EFFRVDLVQRVFDNMPMRNVVSWNTMIA 620
               VD   +VFD M  R+ VSWNT+I+
Sbjct: 374 --NHVDTSLKVFDKMLERDAVSWNTIIS 399


>gb|EPS60569.1| hypothetical protein M569_14234, partial [Genlisea aurea]
          Length = 740

 Score =  148 bits (373), Expect = 1e-33
 Identities = 83/148 (56%), Positives = 99/148 (66%), Gaps = 4/148 (2%)
 Frame = +3

Query: 192 ALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARM----IHSSSFTKSDSYTYSSA 359
           A  LFD IP+P TVLWNT+IIG+ICNG+P EA+  Y+RM    + S   TK DSYT SSA
Sbjct: 1   ARHLFDAIPQPTTVLWNTLIIGYICNGIPLEAISLYSRMLCSGVKSHDGTKCDSYTLSSA 60

Query: 360 LKACAATRQLKLGKALHARILRSYSKLSRIVGNSLLNMYSSCLSPYFELLEGETGRRESE 539
           LKACA TRQL  GKALH  +LR  +  SRIV NSLLNMY++CL P FE            
Sbjct: 61  LKACAETRQLLTGKALHCHVLRFCAYPSRIVYNSLLNMYATCL-PSFE------------ 107

Query: 540 FFRVDLVQRVFDNMPMRNVVSWNTMIAW 623
               DLV+RVF +M  R+V+S NTMI+W
Sbjct: 108 ---CDLVKRVFSSMRKRDVISRNTMISW 132



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
 Frame = +3

Query: 156 LSQLCQEGRPDLALRLFDTIPRPNTVLWNTIIIGFICNGLPREALRFYARMIHSSSFTKS 335
           ++   + G  D A  +FD     N  +WN ++  ++ N     AL  +   + S S   +
Sbjct: 202 ITMYAELGCLDFAREIFDDCSDKNAHVWNAMMGAYVSNSFAVNALELFLEALESDSVDNT 261

Query: 336 DSYTYSSALKACAATRQLKLGKALHARILRSYSKLSRIV-GNSLLNMYSSCLSPYFELLE 512
           D  T+ SAL A +  +   + + LH  +++S S +S +V  N++++ YS C S       
Sbjct: 262 DEVTFVSALAAASDLQDFDIVQQLHGYLVKSSSVVSSVVLLNAVMSSYSRCNS------- 314

Query: 513 GETGRRESEFFRVDLVQRVFDNMPMRNVVSWNTMI 617
                       V+   ++F  +  R+VVSWNT+I
Sbjct: 315 ------------VEDSLKLFGEIRERDVVSWNTII 337