BLASTX nr result

ID: Sinomenium21_contig00020238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00020238
         (558 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007204031.1| hypothetical protein PRUPE_ppa020526mg [Prun...    71   2e-10
ref|XP_002313467.1| hypothetical protein POPTR_0009s02910g [Popu...    57   3e-06

>ref|XP_007204031.1| hypothetical protein PRUPE_ppa020526mg [Prunus persica]
           gi|462399562|gb|EMJ05230.1| hypothetical protein
           PRUPE_ppa020526mg [Prunus persica]
          Length = 170

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 47/141 (33%), Positives = 62/141 (43%)
 Frame = -1

Query: 558 IRIVHIFAPEIIKTDAANFRELVQRLTXXXXXXXXXXXXXXXXXXKMNSNEELLLNDLVF 379
           IRI+HIFAPEIIKTD ANFRELVQRLT                   + S+ E        
Sbjct: 35  IRIIHIFAPEIIKTDVANFRELVQRLTGKPSENGCSKKKNKRPRNLIPSSRE-------- 86

Query: 378 GKQQGEMAQLEEAXXXXXXXXSGYGDQLTAVKEEDDQEVWRGENLDGSFGALEDFDGLVQ 199
            + +   + + +          G       VKEE    +W  EN  G      D +G +Q
Sbjct: 87  -EPKKNASSMADKLELMRTGYMGLDQSRERVKEEG--MMWNAENSGGFLERFADLEGFIQ 143

Query: 198 GLVEFPFLPLMTSSDHHIGMF 136
              EFP LP + +S+ H+  F
Sbjct: 144 EFGEFPLLPNLDASNSHLHGF 164


>ref|XP_002313467.1| hypothetical protein POPTR_0009s02910g [Populus trichocarpa]
           gi|222849875|gb|EEE87422.1| hypothetical protein
           POPTR_0009s02910g [Populus trichocarpa]
          Length = 189

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
 Frame = -1

Query: 558 IRIVHIFAPEIIKTDAANFRELVQRLTXXXXXXXXXXXXXXXXXXKMNSNEELLLNDLVF 379
           +R++HIFAPEIIKTD A+FRELVQRLT                    +  ++      + 
Sbjct: 37  VRVIHIFAPEIIKTDVADFRELVQRLTGQPCESKGMIKKKAGSSSTADKGKKNTAGSSIC 96

Query: 378 GKQQGEMAQLEEAXXXXXXXXSGYGDQLTAVK---EEDDQEVWRGENLDGSFGAL---ED 217
              +  M QL E          G    + A K   E +  ++W GE    +   L   ED
Sbjct: 97  ESNKKSMRQLPE---------LGLPSLIRAEKLKVEVEANKMWGGECSSSNCSFLDGFED 147

Query: 216 FDGLVQGLVE-FPFLPLMTSSDHHIGMF*EILRP 118
            +G +  L + FP     + S H + ++ +I  P
Sbjct: 148 LNGFIHDLSDNFPLTTTNSQSSHEMDVYEDIYTP 181


Top