BLASTX nr result

ID: Sinomenium21_contig00019957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00019957
         (491 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...    59   9e-07
emb|CBI38961.3| unnamed protein product [Vitis vinifera]               59   9e-07
ref|XP_004505582.1| PREDICTED: zinc finger CCCH domain-containin...    58   2e-06
ref|XP_006390319.1| hypothetical protein EUTSA_v10018711mg [Eutr...    57   3e-06
gb|AAK59780.1| At1g75340/F1B16_18 [Arabidopsis thaliana] gi|2841...    56   6e-06
ref|NP_565108.2| zinc finger CCCH domain-containing protein 16 [...    56   6e-06
ref|NP_001185401.1| zinc finger CCCH domain-containing protein 1...    56   6e-06
ref|XP_006301893.1| hypothetical protein CARUB_v10022368mg [Caps...    55   8e-06

>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like
           [Vitis vinifera]
          Length = 383

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
 Frame = +2

Query: 8   AAPQQLPSSASNFSTFSPDGLNPAVSLIG--RTSLDDLKTESLQENMSIWLKEKWNPGEI 181
           AA  Q+ S A+N S     G N   S        L+ ++ ++   +MSIWLKE+WNPGEI
Sbjct: 314 AASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQRDNFSGDMSIWLKEEWNPGEI 373

Query: 182 PEVAPPDGFI 211
           PE  PPD F+
Sbjct: 374 PEEEPPDAFV 383


>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
 Frame = +2

Query: 8   AAPQQLPSSASNFSTFSPDGLNPAVSLIG--RTSLDDLKTESLQENMSIWLKEKWNPGEI 181
           AA  Q+ S A+N S     G N   S        L+ ++ ++   +MSIWLKE+WNPGEI
Sbjct: 325 AASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQRDNFSGDMSIWLKEEWNPGEI 384

Query: 182 PEVAPPDGFI 211
           PE  PPD F+
Sbjct: 385 PEEEPPDAFV 394


>ref|XP_004505582.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
           [Cicer arietinum]
          Length = 375

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/70 (48%), Positives = 44/70 (62%)
 Frame = +2

Query: 2   SLAAPQQLPSSASNFSTFSPDGLNPAVSLIGRTSLDDLKTESLQENMSIWLKEKWNPGEI 181
           S + PQQ PS A  F+  S   + P  S +  TS    + E++  ++SIWLKEKWNPGEI
Sbjct: 312 STSQPQQ-PSFA--FNNTSSTTMLPTASDVLNTS----QVENVSGDVSIWLKEKWNPGEI 364

Query: 182 PEVAPPDGFI 211
           PE APPD F+
Sbjct: 365 PEEAPPDRFV 374


>ref|XP_006390319.1| hypothetical protein EUTSA_v10018711mg [Eutrema salsugineum]
           gi|557086753|gb|ESQ27605.1| hypothetical protein
           EUTSA_v10018711mg [Eutrema salsugineum]
          Length = 380

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
 Frame = +2

Query: 14  PQQLPSSASNFSTFSPDGLN----------PAVSLIGRTSLDDLKTESLQENMSIWLKEK 163
           P   P+ A N S  + +G N          P       +S  +L+ E    + SIWLKEK
Sbjct: 305 PSITPTPAPNTSHTNQNGFNFNSPVASFTAPVTDTTNTSSGTELQAEGAPVDTSIWLKEK 364

Query: 164 WNPGEIPEVAPPDGFI 211
           WNPGEIPE APP  F+
Sbjct: 365 WNPGEIPEQAPPSAFV 380


>gb|AAK59780.1| At1g75340/F1B16_18 [Arabidopsis thaliana]
           gi|28416541|gb|AAO42801.1| At1g75340/F1B16_18
           [Arabidopsis thaliana]
          Length = 321

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
 Frame = +2

Query: 17  QQLPSSASNFSTFSPDGLN----------PAVSLIGRTSLDDLKTESLQENMSIWLKEKW 166
           Q  P+ A+N S  +    N          PA++    +S  +L+      + SIWLKEKW
Sbjct: 247 QSTPTPATNTSQNNQTAFNFNVPVASFTAPAINTTNTSSGTELQIGGDPVDSSIWLKEKW 306

Query: 167 NPGEIPEVAPPDGFI 211
           NPGEIPE APPD F+
Sbjct: 307 NPGEIPEQAPPDAFV 321


>ref|NP_565108.2| zinc finger CCCH domain-containing protein 16 [Arabidopsis
           thaliana] gi|229621710|sp|Q9FWS3.2|C3H16_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 16;
           Short=AtC3H16 gi|332197582|gb|AEE35703.1| zinc finger
           CCCH domain-containing protein 16 [Arabidopsis thaliana]
          Length = 435

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
 Frame = +2

Query: 17  QQLPSSASNFSTFSPDGLN----------PAVSLIGRTSLDDLKTESLQENMSIWLKEKW 166
           Q  P+ A+N S  +    N          PA++    +S  +L+      + SIWLKEKW
Sbjct: 361 QSTPTPATNTSQNNQTAFNFNVPVASFTAPAINTTNTSSGTELQIGGDPVDSSIWLKEKW 420

Query: 167 NPGEIPEVAPPDGFI 211
           NPGEIPE APPD F+
Sbjct: 421 NPGEIPEQAPPDAFV 435


>ref|NP_001185401.1| zinc finger CCCH domain-containing protein 16 [Arabidopsis
           thaliana] gi|332197583|gb|AEE35704.1| zinc finger CCCH
           domain-containing protein 16 [Arabidopsis thaliana]
          Length = 398

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
 Frame = +2

Query: 17  QQLPSSASNFSTFSPDGLN----------PAVSLIGRTSLDDLKTESLQENMSIWLKEKW 166
           Q  P+ A+N S  +    N          PA++    +S  +L+      + SIWLKEKW
Sbjct: 324 QSTPTPATNTSQNNQTAFNFNVPVASFTAPAINTTNTSSGTELQIGGDPVDSSIWLKEKW 383

Query: 167 NPGEIPEVAPPDGFI 211
           NPGEIPE APPD F+
Sbjct: 384 NPGEIPEQAPPDAFV 398


>ref|XP_006301893.1| hypothetical protein CARUB_v10022368mg [Capsella rubella]
           gi|482570603|gb|EOA34791.1| hypothetical protein
           CARUB_v10022368mg [Capsella rubella]
          Length = 444

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/60 (46%), Positives = 35/60 (58%)
 Frame = +2

Query: 32  SASNFSTFSPDGLNPAVSLIGRTSLDDLKTESLQENMSIWLKEKWNPGEIPEVAPPDGFI 211
           +A NF+         AV     +S  +L+ E    + SIWLKEKWNPGEIPE APPD F+
Sbjct: 385 TAFNFNVPVASFTASAVDATNTSSGTELQIEGEPVDSSIWLKEKWNPGEIPEQAPPDAFV 444


Top