BLASTX nr result

ID: Sinomenium21_contig00019368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00019368
         (408 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007043730.1| Nucleic acid binding protein, putative [Theo...    79   5e-13
ref|XP_006368847.1| hypothetical protein POPTR_0001s12770g, part...    71   2e-10
ref|XP_002270688.2| PREDICTED: uncharacterized protein LOC100258...    70   3e-10
emb|CBI18351.3| unnamed protein product [Vitis vinifera]               70   3e-10
ref|XP_002512692.1| nucleic acid binding protein, putative [Rici...    69   9e-10

>ref|XP_007043730.1| Nucleic acid binding protein, putative [Theobroma cacao]
           gi|508707665|gb|EOX99561.1| Nucleic acid binding
           protein, putative [Theobroma cacao]
          Length = 389

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 56/112 (50%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
 Frame = -2

Query: 335 ANTN-GLSVSNQLADNTLRPLFFCSNSDVNFDSNASRALWSGFSSLSGPIRNANIAISSP 159
           ANT   LSVSN+  DN+LRPL   + + V   SN    +++  +SL+ P+     AI S 
Sbjct: 172 ANTMMNLSVSNEKMDNSLRPLSL-NPAGVMISSNLD-PIFNPRTSLASPL-----AIGSA 224

Query: 158 SMSATALLQKAAEMGSKISDSEVSPILLRGGFTGYSYSTMSSHKFVQEASAI 3
             SATALLQKAAEMG+KISD  ++PILLR GFTGYS  +M+S    QE S++
Sbjct: 225 YTSATALLQKAAEMGAKISDHTIAPILLR-GFTGYSTGSMNSAGSAQEGSSM 275


>ref|XP_006368847.1| hypothetical protein POPTR_0001s12770g, partial [Populus
           trichocarpa] gi|550347114|gb|ERP65416.1| hypothetical
           protein POPTR_0001s12770g, partial [Populus trichocarpa]
          Length = 410

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 50/109 (45%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
 Frame = -2

Query: 320 LSVSNQLADNTLRPLFFCSNSDV---NFDSNASRALWSGFSSLSGPIRNANIAISSPSMS 150
           L++S + +D+ LRPL   S+  V   N +   S  L + FSSL G   + + AI S   S
Sbjct: 189 LTISAENSDSALRPLSLNSSGMVMSSNLNPRTSLPL-ACFSSLDGSNTSPS-AIGSSYTS 246

Query: 149 ATALLQKAAEMGSKISDSEVSPILLRGGFTGYSYSTMSSHKFVQEASAI 3
           ATALLQKAA MG+KISD+ ++PIL + GF GYS ++M+S   V E S+I
Sbjct: 247 ATALLQKAAVMGAKISDNSIAPILFK-GFNGYSTTSMNSSGLVPEGSSI 294


>ref|XP_002270688.2| PREDICTED: uncharacterized protein LOC100258126 [Vitis vinifera]
          Length = 443

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
 Frame = -2

Query: 320 LSVSNQLADNTLRP-------LFFCSNSDVNFDSNASRALW-SGFSSLSGPIRNANIAIS 165
           LSV N+  DN  RP       L   +N +  F+   S+  + SG  S + P+      I 
Sbjct: 227 LSVFNENIDNITRPASLNSPGLTISNNLNQIFNPTTSQECFGSGIGSNNSPM-----GIG 281

Query: 164 SPSMSATALLQKAAEMGSKISDSEVSPILLRGGFTGYSYSTMSSHKFVQEASAI 3
           S   SATALLQKAAEMG+KISD+ ++P+L R GFTGYS  + +S   VQE S++
Sbjct: 282 STYTSATALLQKAAEMGAKISDNSIAPVLFR-GFTGYSVGSTNSCGSVQETSSV 334


>emb|CBI18351.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
 Frame = -2

Query: 320 LSVSNQLADNTLRP-------LFFCSNSDVNFDSNASRALW-SGFSSLSGPIRNANIAIS 165
           LSV N+  DN  RP       L   +N +  F+   S+  + SG  S + P+      I 
Sbjct: 178 LSVFNENIDNITRPASLNSPGLTISNNLNQIFNPTTSQECFGSGIGSNNSPM-----GIG 232

Query: 164 SPSMSATALLQKAAEMGSKISDSEVSPILLRGGFTGYSYSTMSSHKFVQEASAI 3
           S   SATALLQKAAEMG+KISD+ ++P+L R GFTGYS  + +S   VQE S++
Sbjct: 233 STYTSATALLQKAAEMGAKISDNSIAPVLFR-GFTGYSVGSTNSCGSVQETSSV 285


>ref|XP_002512692.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223548653|gb|EEF50144.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 453

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 38/58 (65%), Positives = 44/58 (75%)
 Frame = -2

Query: 176 IAISSPSMSATALLQKAAEMGSKISDSEVSPILLRGGFTGYSYSTMSSHKFVQEASAI 3
           +AI +P  SATALLQKAAEMG+KISD+ +SPILLR GFTGYS S M+S     E S I
Sbjct: 276 MAIGAPYTSATALLQKAAEMGTKISDNSISPILLR-GFTGYSTSRMNSSGSAHEGSVI 332


Top