BLASTX nr result
ID: Sinomenium21_contig00019267
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00019267
(269 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN68578.1| hypothetical protein VITISV_019283 [Vitis vinifera] 136 3e-30
gb|ABW81116.1| putative gag-pol polyprotein [Boechera divaricarpa] 134 2e-29
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 132 5e-29
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia... 132 5e-29
emb|CAN64095.1| hypothetical protein VITISV_018123 [Vitis vinifera] 132 7e-29
emb|CAA16691.1| retrotransposon - like protein [Arabidopsis thal... 131 9e-29
emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera] 128 7e-28
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 128 9e-28
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 127 2e-27
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 126 3e-27
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 126 3e-27
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 126 3e-27
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 126 3e-27
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 126 3e-27
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 126 3e-27
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 126 4e-27
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 125 6e-27
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 125 8e-27
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 125 8e-27
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 125 8e-27
>emb|CAN68578.1| hypothetical protein VITISV_019283 [Vitis vinifera]
Length = 472
Score = 136 bits (343), Expect = 3e-30
Identities = 66/88 (75%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
NLL E PSTP IY DNVGATYVC NPVFHS MKHIAIDFHFVRDQV+ L +SH+
Sbjct: 370 NLLYEFQAQSPSTPTIYYDNVGATYVCVNPVFHSCMKHIAIDFHFVRDQVSKKLLHVSHI 429
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
HTSDQLADSLTKPLP L F HRSKIG+
Sbjct: 430 HTSDQLADSLTKPLPHLQFLNHRSKIGI 457
>gb|ABW81116.1| putative gag-pol polyprotein [Boechera divaricarpa]
Length = 216
Score = 134 bits (336), Expect = 2e-29
Identities = 63/88 (71%), Positives = 74/88 (84%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL++ LPSTPVIYCDNVGATY+ +NPVFHSRMKHIAID+HFVRD V +GRLR++HV
Sbjct: 123 SLLSELYVTLPSTPVIYCDNVGATYLSANPVFHSRMKHIAIDYHFVRDNVQSGRLRVTHV 182
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPLPR F SK+ V
Sbjct: 183 STHDQLADALTKPLPRPRFSQITSKLRV 210
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 132 bits (332), Expect = 5e-29
Identities = 61/88 (69%), Positives = 72/88 (81%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I LP PVIYCDNVGATY+ +NPVFHSRMKH+A+D+HF+RD V+ G LR+SH+
Sbjct: 1441 SLLTELGITLPKMPVIYCDNVGATYLSANPVFHSRMKHLALDYHFIRDNVSAGALRVSHI 1500
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPLPR HF SKIGV
Sbjct: 1501 STHDQLADALTKPLPRQHFLQFSSKIGV 1528
>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268438|emb|CAB80958.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1474
Score = 132 bits (332), Expect = 5e-29
Identities = 60/88 (68%), Positives = 73/88 (82%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL +LHI LP P I+CDN+GATY+C+NPVFHSRMKHIAID+HFVR+ + +G LR+SHV
Sbjct: 1381 SLLSKLHIRLPIRPSIFCDNIGATYLCANPVFHSRMKHIAIDYHFVRNMIQSGALRVSHV 1440
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPL R HF + R KIGV
Sbjct: 1441 STRDQLADALTKPLSRAHFQSARFKIGV 1468
>emb|CAN64095.1| hypothetical protein VITISV_018123 [Vitis vinifera]
Length = 1143
Score = 132 bits (331), Expect = 7e-29
Identities = 65/88 (73%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
NLL EL PSTP IY DNVGATYVC+N VFHSRMKHIAIDF FVRDQV+ L +SH+
Sbjct: 1041 NLLYELQAQSPSTPTIYYDNVGATYVCTNIVFHSRMKHIAIDFPFVRDQVSKKLLHVSHI 1100
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
HTSDQLADSLTKPLPR F H SKIG+
Sbjct: 1101 HTSDQLADSLTKPLPRFQFLNHCSKIGI 1128
>emb|CAA16691.1| retrotransposon - like protein [Arabidopsis thaliana]
gi|10177325|dbj|BAB10674.1| copia-like retroelement pol
polyprotein-like [Arabidopsis thaliana]
Length = 1021
Score = 131 bits (330), Expect = 9e-29
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I LP PV+YCDNVGAT++C+NPVFHSRMKHIAID+HF+R QV G LR++HV
Sbjct: 217 SLLTELGITLPKPPVVYCDNVGATFLCANPVFHSRMKHIAIDYHFIRGQVQQGILRVAHV 276
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIG 6
+T DQLAD+LTKPLPR HF R KIG
Sbjct: 277 NTRDQLADALTKPLPRNHFTELRDKIG 303
>emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera]
Length = 569
Score = 128 bits (322), Expect = 7e-28
Identities = 57/88 (64%), Positives = 74/88 (84%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL + LP PVIYCDNVGAT++CSNPVFHSRMKH+A+D+HF+R+QV G LR+SH+
Sbjct: 465 SLLTELGVTLPQQPVIYCDNVGATHLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHI 524
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
SDQLAD+LTKPL R F++ ++KIG+
Sbjct: 525 SASDQLADALTKPLARPQFNSLKAKIGL 552
>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
gi|225898008|dbj|BAH30336.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1459
Score = 128 bits (321), Expect = 9e-28
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL ELHI LP P I+CDN+GATY+C+NPVFHSRMKHIA+D+HFVR + + LR+SHV
Sbjct: 1366 SLLTELHIRLPHGPTIFCDNIGATYICANPVFHSRMKHIALDYHFVRGMIQSRALRVSHV 1425
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T+DQLAD+LTK L R HF + RSKIGV
Sbjct: 1426 STNDQLADALTKSLSRPHFLSARSKIGV 1453
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 127 bits (319), Expect = 2e-27
Identities = 62/88 (70%), Positives = 71/88 (80%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I L S PV+YCDNVGATY+ +NPVFHSRMKHIA+DFHFVR+ V G LR++HV
Sbjct: 1358 SLLTELGITLSSPPVVYCDNVGATYLSANPVFHSRMKHIALDFHFVRESVQAGALRVTHV 1417
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPLPR F T SKIGV
Sbjct: 1418 STKDQLADALTKPLPRQPFTTLISKIGV 1445
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 126 bits (317), Expect = 3e-27
Identities = 61/88 (69%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I L PVIYCDNVGATY+C+NPVFHSRMKHIAID+HF+R+QV +G LR+ HV
Sbjct: 1338 SLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHV 1397
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPL R F SKIGV
Sbjct: 1398 STHDQLADTLTKPLSRTAFQNFASKIGV 1425
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 126 bits (317), Expect = 3e-27
Identities = 61/88 (69%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I L PVIYCDNVGATY+C+NPVFHSRMKHIAID+HF+R+QV +G LR+ HV
Sbjct: 1373 SLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHV 1432
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPL R F SKIGV
Sbjct: 1433 STHDQLADTLTKPLSRTAFQNFASKIGV 1460
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 126 bits (317), Expect = 3e-27
Identities = 61/88 (69%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I L PVIYCDNVGATY+C+NPVFHSRMKHIAID+HF+R+QV +G LR+ HV
Sbjct: 1354 SLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHV 1413
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPL R F SKIGV
Sbjct: 1414 STHDQLADTLTKPLSRTAFQNFASKIGV 1441
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 126 bits (317), Expect = 3e-27
Identities = 61/88 (69%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I L PVIYCDNVGATY+C+NPVFHSRMKHIAID+HF+R+QV +G LR+ HV
Sbjct: 1373 SLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHV 1432
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPL R F SKIGV
Sbjct: 1433 STHDQLADTLTKPLSRTAFQNFASKIGV 1460
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 126 bits (317), Expect = 3e-27
Identities = 61/88 (69%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I L PVIYCDNVGATY+C+NPVFHSRMKHIAID+HF+R+QV +G LR+ HV
Sbjct: 1354 SLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHV 1413
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPL R F SKIGV
Sbjct: 1414 STHDQLADTLTKPLSRTAFQNFASKIGV 1441
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 126 bits (317), Expect = 3e-27
Identities = 61/88 (69%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I L PVIYCDNVGATY+C+NPVFHSRMKHIAID+HF+R+QV +G LR+ HV
Sbjct: 1373 SLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHV 1432
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPL R F SKIGV
Sbjct: 1433 STHDQLADTLTKPLSRTAFQNFASKIGV 1460
>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
Length = 478
Score = 126 bits (316), Expect = 4e-27
Identities = 57/88 (64%), Positives = 72/88 (81%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL + LP PVIYCDNVGAT +CSNPVFHSRMKH+A+D+HF+R+QV G LR+SH+
Sbjct: 374 SLLTELGVTLPQQPVIYCDNVGATNLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHI 433
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
SDQLAD+LTKPL R F + ++KIG+
Sbjct: 434 SASDQLADALTKPLARPQFDSLKAKIGL 461
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 125 bits (314), Expect = 6e-27
Identities = 60/89 (67%), Positives = 71/89 (79%)
Frame = -1
Query: 269 TNLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISH 90
++LL +L I LP+ PVIYCDNVGAT VCSNPVFHSRMKH+A DFHF+RDQV G LR++H
Sbjct: 1078 SSLLCDLGIQLPTCPVIYCDNVGATQVCSNPVFHSRMKHVAFDFHFIRDQVQKGILRVAH 1137
Query: 89 VHTSDQLADSLTKPLPRLHFHTHRSKIGV 3
V ++DQLAD LTK LPR F R KIG+
Sbjct: 1138 VSSTDQLADLLTKSLPRARFLFLRDKIGL 1166
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 125 bits (313), Expect = 8e-27
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I L PVIYCDNVGATY+C+NPVFHSRMKHIA+D+HF+R+QV +G LR+ HV
Sbjct: 1375 SLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHV 1434
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPL R+ F KIGV
Sbjct: 1435 STHDQLADTLTKPLSRVAFQNFSRKIGV 1462
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 125 bits (313), Expect = 8e-27
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I L PVIYCDNVGATY+C+NPVFHSRMKHIA+D+HF+R+QV +G LR+ HV
Sbjct: 1230 SLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHV 1289
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPL R+ F KIGV
Sbjct: 1290 STHDQLADTLTKPLSRVAFQNFSRKIGV 1317
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 125 bits (313), Expect = 8e-27
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = -1
Query: 266 NLLGELHIPLPSTPVIYCDNVGATYVCSNPVFHSRMKHIAIDFHFVRDQVATGRLRISHV 87
+LL EL I L PVIYCDNVGATY+C+NPVFHSRMKHIA+D+HF+R+QV +G LR+ HV
Sbjct: 1375 SLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHV 1434
Query: 86 HTSDQLADSLTKPLPRLHFHTHRSKIGV 3
T DQLAD+LTKPL R+ F KIGV
Sbjct: 1435 STHDQLADTLTKPLSRVAFQNFSRKIGV 1462