BLASTX nr result
ID: Sinomenium21_contig00019217
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium21_contig00019217 (1116 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza] 106 2e-20 ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco... 102 4e-20 gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus... 102 7e-20 ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 98 2e-19 ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 100 2e-19 gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 100 3e-19 dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 100 4e-19 ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 101 5e-19 gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 99 7e-19 gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 99 7e-19 ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 96 1e-18 gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 98 2e-18 ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phas... 96 2e-18 gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu... 94 4e-18 ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 99 4e-18 ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 93 5e-18 ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis... 93 5e-18 emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 97 6e-18 gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya] 90 6e-18 ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 97 2e-17 >gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza] Length = 1195 Score = 106 bits (265), Expect = 2e-20 Identities = 68/168 (40%), Positives = 93/168 (55%), Gaps = 7/168 (4%) Frame = -3 Query: 976 LEDLAATDRHVIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINL 797 L+ T +I F KNMVNE L TIC+ HVV+A+ SEYGAL K + L ELA ++ Sbjct: 897 LKPREVTHSDIIEFFTKNMVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDF 956 Query: 796 SKIGKLANMPQSFKHKEYPGFMRKQAFQSYNLNKILGSSI-DIGDASNWQMLSS---*YP 629 K GK+ MP K + YP FM K+ QSY KILG + DA N +S YP Sbjct: 957 PKTGKIVTMPPDLKPQMYPDFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQLTYP 1016 Query: 628 SIIQCERSFEILKSR--VLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 + I ++ E+ S+ + ++W+ K Y G L G++KVN E+ VV Sbjct: 1017 ADISYDQELEVTGSKDFIADAWSCKCSYDGQLAGLLGQYKVNSEDEVV 1064 Score = 61.6 bits (148), Expect = 6e-07 Identities = 30/55 (54%), Positives = 41/55 (74%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 I+LA+LA ++FPKTGK+V M LKP++Y +FM K+ELQSY KIL ++ RR Sbjct: 944 IKLAELAAIAVDFPKTGKIVTMPPDLKPQMYPDFMGKEELQSYKSTKILGKLYRR 998 >ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum] gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum] Length = 1197 Score = 102 bits (254), Expect(2) = 4e-20 Identities = 74/188 (39%), Positives = 99/188 (52%), Gaps = 10/188 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F+KNMV E L IC+ HVV+A+ SE+GA+ K + L ELA ++ K GKL MP Sbjct: 908 IIDFFLKNMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPKTGKLVTMP 967 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILG----SSIDIGDASNWQMLSS*Y-PSIIQCERSF 602 K K YP FM K+ FQSY KILG ID+ DA + Y P I + + Sbjct: 968 FDLKPKMYPDFMGKEPFQSYESKKILGKLYRQVIDVYDAEGGESSGLEYVPKDIPYDTNL 1027 Query: 601 EI--LKSRVLNSWNWKVQY-GLFYSL*GRHKVNFEEVVVI--ITYDPFQS*RLKTTIAEG 437 EI + + ++WN K Y G L G++KVN EE VV I P S + + + E Sbjct: 1028 EIPGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKKQGELKER 1087 Query: 436 EAHILNVL 413 H N+L Sbjct: 1088 LKHAYNML 1095 Score = 23.5 bits (49), Expect(2) = 4e-20 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = -2 Query: 413 LLKKEFNHFFENLRHDFE 360 +L+KEF + FE + DF+ Sbjct: 1094 MLRKEFRNVFEQMEPDFD 1111 Score = 59.3 bits (142), Expect = 3e-06 Identities = 29/55 (52%), Positives = 40/55 (72%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 ++LA+LA ++FPKTGKLV M LKPK+Y +FM K+ QSY KKIL ++ R+ Sbjct: 945 LKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEPFQSYESKKILGKLYRQ 999 >gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus] Length = 1196 Score = 102 bits (254), Expect(2) = 7e-20 Identities = 65/160 (40%), Positives = 88/160 (55%), Gaps = 9/160 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F KNMVNE L IC+ HVV+A+ SEYGAL K + L ELA ++ K GK+ MP Sbjct: 909 IIEFFTKNMVNESLGAICNAHVVHADSSEYGALDEKCIKLAELAAIAVDFPKTGKIVTMP 968 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILG--------SSIDIGDASNWQMLSS*YPSIIQCE 611 K K YP FM K FQ+Y +KILG S+ D ++S ++ Y ++ Sbjct: 969 AELKPKLYPDFMGKDEFQTYKSSKILGKLYRKIKDSNYDYEESSENTSVNIAYDQELEIA 1028 Query: 610 RSFEILKSRVLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 S +S + ++WN K Y G L G++KVN EE VV Sbjct: 1029 GS----ESFITDAWNCKCSYDGQLTGLLGQYKVNSEEEVV 1064 Score = 22.7 bits (47), Expect(2) = 7e-20 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = -2 Query: 1094 DAIEFFTKNM 1065 D IEFFTKNM Sbjct: 908 DIIEFFTKNM 917 Score = 58.9 bits (141), Expect = 4e-06 Identities = 28/55 (50%), Positives = 39/55 (70%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 I+LA+LA ++FPKTGK+V M LKPK+Y +FM K E Q+Y KIL ++ R+ Sbjct: 946 IKLAELAAIAVDFPKTGKIVTMPAELKPKLYPDFMGKDEFQTYKSSKILGKLYRK 1000 >ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis] gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase, putative [Ricinus communis] Length = 1203 Score = 97.8 bits (242), Expect(2) = 2e-19 Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 15/166 (9%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F KNMVNE L IC+ HVV+A+ SEYGAL + L ELA T ++ K GKL MP Sbjct: 908 IIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMP 967 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILG------------SSIDIGDASNWQMLSS*YPSI 623 K K YP FM K+ +QSYN NKILG D DA+ L+ Sbjct: 968 PHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNL-VRGD 1026 Query: 622 IQCERSFEILKSR--VLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 I ++ E+ S +L++W+ K Y G L ++KV EE VV Sbjct: 1027 IPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVV 1072 Score = 26.2 bits (56), Expect(2) = 2e-19 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFEEST 351 LKKEF FE + DFE+ T Sbjct: 1101 LKKEFRQVFEKMDSDFEQLT 1120 Score = 63.5 bits (153), Expect = 1e-07 Identities = 31/55 (56%), Positives = 41/55 (74%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 I+LA+LA T ++FPKTGKLV M LKPK+Y +FM K++ QSYN KIL + R+ Sbjct: 945 IKLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQ 999 >ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Solanum tuberosum] Length = 1198 Score = 100 bits (250), Expect(2) = 2e-19 Identities = 67/159 (42%), Positives = 88/159 (55%), Gaps = 8/159 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F KNMV E L IC+ HVV+A+ SE+GAL K + L ELA ++ K GKL MP Sbjct: 909 IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 968 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILG----SSIDIGDASNWQMLSS*Y-PSIIQCERSF 602 K K YP FM K+ FQ+Y KILG ID+ DA + + P I + + Sbjct: 969 FDLKPKMYPDFMGKEPFQTYESKKILGKLYRQVIDVYDAEGGESSGLEFVPKDIPYDTNI 1028 Query: 601 EIL--KSRVLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 EIL + + ++WN K Y G L G++KVN EE VV Sbjct: 1029 EILGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVV 1067 Score = 22.7 bits (47), Expect(2) = 2e-19 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFE 360 L+KEF + FE + DF+ Sbjct: 1096 LRKEFRNVFEQMEPDFD 1112 Score = 58.2 bits (139), Expect = 6e-06 Identities = 28/55 (50%), Positives = 40/55 (72%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 ++LA+LA ++FPKTGKLV M LKPK+Y +FM K+ Q+Y KKIL ++ R+ Sbjct: 946 LKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEPFQTYESKKILGKLYRQ 1000 >gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] Length = 1197 Score = 100 bits (248), Expect(2) = 3e-19 Identities = 75/188 (39%), Positives = 96/188 (51%), Gaps = 10/188 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F KNMV E L IC+ HVV+A+ SE+GAL K + L ELA ++ K GKL MP Sbjct: 908 IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILGSSI----DIGDASNWQMLS-S*YPSIIQCERSF 602 K K YP FM K+ FQSY KILG D+ D P+ I + S Sbjct: 968 FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSL 1027 Query: 601 EILKSRVL--NSWNWKVQY-GLFYSL*GRHKVNFEEVVVI--ITYDPFQS*RLKTTIAEG 437 EI S V ++WN K Y G + L G++KVN EE VV I P S + + + E Sbjct: 1028 EIPGSTVFMGDAWNCKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKER 1087 Query: 436 EAHILNVL 413 H N+L Sbjct: 1088 LKHAYNML 1095 Score = 22.7 bits (47), Expect(2) = 3e-19 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = -2 Query: 413 LLKKEFNHFFENLRHDFE 360 +L+KEF + FE + DF+ Sbjct: 1094 MLRKEFRNVFERMDPDFD 1111 Score = 61.6 bits (148), Expect = 6e-07 Identities = 30/55 (54%), Positives = 41/55 (74%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 ++LA+LA ++FPKTGKLV M LKPK+Y +FM K+E QSY KKIL ++ R+ Sbjct: 945 LKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQ 999 >dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 100 bits (249), Expect(2) = 4e-19 Identities = 68/159 (42%), Positives = 85/159 (53%), Gaps = 8/159 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F KNMV E L IC+ HVV+A+ SE+GAL K + L ELA ++ K GKL MP Sbjct: 908 IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILGSSI----DIGDASNWQMLS-S*YPSIIQCERSF 602 K K YP FM K+ FQSY KILG D+ DA P I + + Sbjct: 968 FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDSTL 1027 Query: 601 EILKSRVL--NSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 EIL S ++WN K Y G + L G++KVN EE VV Sbjct: 1028 EILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVV 1066 Score = 21.9 bits (45), Expect(2) = 4e-19 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFE 360 L+KEF + FE + DF+ Sbjct: 1095 LRKEFRNVFERMDPDFD 1111 Score = 63.2 bits (152), Expect = 2e-07 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*R--RTTC 174 ++LA+LA ++FPKTGKLV M LKPK+Y +FM K+E QSY KKIL ++ R + C Sbjct: 945 LKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVC 1004 Query: 175 LSSGNFLESLLILTK 219 + G L ++ K Sbjct: 1005 DAEGEVSAGLEVVPK 1019 >ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Citrus sinensis] Length = 1197 Score = 101 bits (252), Expect = 5e-19 Identities = 63/165 (38%), Positives = 88/165 (53%), Gaps = 12/165 (7%) Frame = -3 Query: 952 RHVIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLAN 773 R +I F K+MVNE L TIC+ HVV+A++SEYGAL + L ELA T ++ K GK+ Sbjct: 906 RDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAVDFPKTGKIVT 965 Query: 772 MPQSFKHKEYPGFMRKQAFQSYNLNKILG-----------SSIDIGDASNWQMLSS*YPS 626 MP K K YP FM K+A+QSY NKILG I + + + Y + Sbjct: 966 MPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKDAYDEDISVSSEVDINPVDIHYDT 1025 Query: 625 IIQCERSFEILKSRVLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 ++ S + + ++WN K Y G L ++KVN EE +V Sbjct: 1026 DLEVPESVDF----IADAWNQKCSYDGQLNGLLEQYKVNREEELV 1066 Score = 58.5 bits (140), Expect = 5e-06 Identities = 29/56 (51%), Positives = 39/56 (69%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RRT 168 I LA+LA T ++FPKTGK+V M LKPK+Y +FM K+ QSY KIL + R++ Sbjct: 945 ILLAELAATAVDFPKTGKIVTMPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQS 1000 >gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 99.0 bits (245), Expect(2) = 7e-19 Identities = 68/159 (42%), Positives = 84/159 (52%), Gaps = 8/159 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F KNMV E L IC+ HVV+A+ SE+GAL K + L ELA ++ K GKL MP Sbjct: 908 IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILGSSI----DIGDASNWQMLS-S*YPSIIQCERSF 602 K K YP FM K+ FQSY KILG D+ DA P I + + Sbjct: 968 FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTL 1027 Query: 601 EILKSRVL--NSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 EIL S ++WN K Y G L G++KVN EE VV Sbjct: 1028 EILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVV 1066 Score = 22.7 bits (47), Expect(2) = 7e-19 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFE 360 L+KEF + FE + DF+ Sbjct: 1095 LRKEFRNVFERMEPDFD 1111 Score = 63.2 bits (152), Expect = 2e-07 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*R--RTTC 174 ++LA+LA ++FPKTGKLV M LKPK+Y +FM K+E QSY KKIL ++ R + C Sbjct: 945 LKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVC 1004 Query: 175 LSSGNFLESLLILTK 219 + G L ++ K Sbjct: 1005 DAEGEVSAGLEVVPK 1019 >gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] Length = 1197 Score = 99.0 bits (245), Expect(2) = 7e-19 Identities = 68/159 (42%), Positives = 84/159 (52%), Gaps = 8/159 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F KNMV E L IC+ HVV+A+ SE+GAL K + L ELA ++ K GKL MP Sbjct: 908 IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILGSSI----DIGDASNWQMLS-S*YPSIIQCERSF 602 K K YP FM K+ FQSY KILG D+ DA P I + + Sbjct: 968 FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTL 1027 Query: 601 EILKSRVL--NSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 EIL S ++WN K Y G L G++KVN EE VV Sbjct: 1028 EILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVV 1066 Score = 22.7 bits (47), Expect(2) = 7e-19 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFE 360 L+KEF + FE + DF+ Sbjct: 1095 LRKEFRNVFERMEPDFD 1111 Score = 63.2 bits (152), Expect = 2e-07 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*R--RTTC 174 ++LA+LA ++FPKTGKLV M LKPK+Y +FM K+E QSY KKIL ++ R + C Sbjct: 945 LKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVC 1004 Query: 175 LSSGNFLESLLILTK 219 + G L ++ K Sbjct: 1005 DAEGEVSAGLEVVPK 1019 >ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine max] gi|571459266|ref|XP_006581359.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Glycine max] Length = 1204 Score = 95.9 bits (237), Expect(2) = 1e-18 Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 8/161 (4%) Frame = -3 Query: 952 RHVIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLAN 773 R +I F++NMVNE+L IC+ HVV+A+ S+YGAL K + L ELA T ++ K GKL Sbjct: 905 RDIIEFFVRNMVNEHLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKLVT 964 Query: 772 MPQSFKHKEYPGFMRKQAFQSYNLNKILGSSI-DIGDASNWQMLSS*YPSI----IQCER 608 MP K K YP FM K+ QSY KILG I DA + + + + Y + I ++ Sbjct: 965 MPPHLKPKLYPDFMGKERHQSYRSKKILGRLYRRIKDAYD-EDIDAPYLNFVTGDIPYDK 1023 Query: 607 SFEILKSR--VLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 E+ S + ++W K Y G L G++KV EE VV Sbjct: 1024 DLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVV 1064 Score = 25.0 bits (53), Expect(2) = 1e-18 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFEE 357 LKKEF H FE L D E Sbjct: 1093 LKKEFRHTFEKLNSDVGE 1110 Score = 62.8 bits (151), Expect = 3e-07 Identities = 32/55 (58%), Positives = 39/55 (70%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 I LA+LA T ++FPKTGKLV M LKPK+Y +FM K+ QSY KKIL + RR Sbjct: 944 IHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQSYRSKKILGRLYRR 998 >gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] Length = 1197 Score = 97.8 bits (242), Expect(2) = 2e-18 Identities = 67/159 (42%), Positives = 84/159 (52%), Gaps = 8/159 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F KNMV E L IC+ HVV+A+ SE+GAL K + L ELA ++ K GKL MP Sbjct: 908 IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILGSSI----DIGDASNWQMLS-S*YPSIIQCERSF 602 K K YP FM K+ FQSY KILG D+ D P+ I + S Sbjct: 968 FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSL 1027 Query: 601 EILKSRVL--NSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 EI S ++WN K Y G + L G++KVN EE VV Sbjct: 1028 EIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVV 1066 Score = 22.7 bits (47), Expect(2) = 2e-18 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFE 360 L+KEF + FE + DF+ Sbjct: 1095 LRKEFRNVFERMEPDFD 1111 Score = 61.6 bits (148), Expect = 6e-07 Identities = 30/55 (54%), Positives = 41/55 (74%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 ++LA+LA ++FPKTGKLV M LKPK+Y +FM K+E QSY KKIL ++ R+ Sbjct: 945 LKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQ 999 >ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris] gi|561010117|gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris] Length = 1204 Score = 95.5 bits (236), Expect(2) = 2e-18 Identities = 66/169 (39%), Positives = 92/169 (54%), Gaps = 8/169 (4%) Frame = -3 Query: 976 LEDLAATDRHVIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINL 797 L+ T R +I F++NMVNE+L IC+ HVV+A+ S+Y AL K + L ELA T ++ Sbjct: 897 LQTRQVTTRDIIDFFVRNMVNEHLGAICNAHVVHADSSDYDALDEKCIHLAELAATAVDF 956 Query: 796 SKIGKLANMPQSFKHKEYPGFMRKQAFQSYNLNKILGSSI-DIGDASNWQMLSS*YPSI- 623 K GKL MP K K YP FM K+ QSY K+LG I DA + + + + Y + Sbjct: 957 PKTGKLVTMPYHLKPKLYPDFMGKEKHQSYRSKKVLGRLYRRIKDAYD-EDIDAPYLNFV 1015 Query: 622 ---IQCERSFEILKSR--VLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 I ++ E+ S + +SW K Y G L G++KV EE VV Sbjct: 1016 SGDIPYDKDLEVPGSSAFIADSWEQKCAYDGQLSGLLGQYKVKREEEVV 1064 Score = 24.6 bits (52), Expect(2) = 2e-18 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFEE 357 LKKEF H FE L D E Sbjct: 1093 LKKEFRHTFEKLSSDVGE 1110 Score = 62.8 bits (151), Expect = 3e-07 Identities = 31/55 (56%), Positives = 40/55 (72%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 I LA+LA T ++FPKTGKLV M LKPK+Y +FM K++ QSY KK+L + RR Sbjct: 944 IHLAELAATAVDFPKTGKLVTMPYHLKPKLYPDFMGKEKHQSYRSKKVLGRLYRR 998 >gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum] gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum] Length = 1196 Score = 94.4 bits (233), Expect(2) = 4e-18 Identities = 63/169 (37%), Positives = 89/169 (52%), Gaps = 12/169 (7%) Frame = -3 Query: 964 AATDRHVIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIG 785 + T + +I F KNMVNE+L +IC+ HVV+++ SE+GA K + L ELA ++ K G Sbjct: 901 SVTHKDIIEFFSKNMVNEHLGSICNAHVVHSDLSEHGASDEKCIHLAELAAIAVDFPKTG 960 Query: 784 KLANMPQSFKHKEYPGFMRKQAFQSYNLNKILGS---------SIDIGDASNWQMLSS*Y 632 K+ +MP K K YP FM K+ FQSY NKILG D+ ++S + Sbjct: 961 KIVSMPAQLKPKLYPDFMGKEEFQSYKSNKILGRLYRYIKDAYDKDVSESSELNFGA--- 1017 Query: 631 PSIIQCERSFEILKSR--VLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 S I + EI S + ++W K Y G L ++KV EE VV Sbjct: 1018 -SDINYDADLEITGSADYITDAWAKKCSYDGQLIGLLKQYKVKREEEVV 1065 Score = 25.0 bits (53), Expect(2) = 4e-18 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFEE 357 L+KEF FEN+ +FE+ Sbjct: 1094 LRKEFRQLFENMDSEFEQ 1111 Score = 59.7 bits (143), Expect = 2e-06 Identities = 29/54 (53%), Positives = 38/54 (70%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*R 162 I LA+LA ++FPKTGK+V+M LKPK+Y +FM K+E QSY KIL + R Sbjct: 944 IHLAELAAIAVDFPKTGKIVSMPAQLKPKLYPDFMGKEEFQSYKSNKILGRLYR 997 >ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine max] gi|571449461|ref|XP_006578148.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Glycine max] Length = 1204 Score = 98.6 bits (244), Expect = 4e-18 Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 8/161 (4%) Frame = -3 Query: 952 RHVIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLAN 773 R +I F++NMVNE+L IC+ HVV+A+ S+YGAL K + L ELA T ++ K GKL Sbjct: 905 RDIIEFFVRNMVNEHLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKLVT 964 Query: 772 MPQSFKHKEYPGFMRKQAFQSYNLNKILGSSI-DIGDASNWQMLSS*YPSI----IQCER 608 MP K K YP FM K+ QSY NKILG I DA + + + + Y + I ++ Sbjct: 965 MPPHLKPKLYPDFMGKERHQSYRSNKILGRLYRHIKDAYD-EDIEAPYLNFVTGDIPYDK 1023 Query: 607 SFEILKSR--VLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 E+ S + ++W K Y G L G++KV EE VV Sbjct: 1024 DLEVPGSADFIADAWEQKCSYDGQLSGLIGQYKVKREEEVV 1064 Score = 58.9 bits (141), Expect = 4e-06 Identities = 30/54 (55%), Positives = 37/54 (68%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*R 162 I LA+LA T ++FPKTGKLV M LKPK+Y +FM K+ QSY KIL + R Sbjct: 944 IHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQSYRSNKILGRLYR 997 >ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus] Length = 1197 Score = 92.8 bits (229), Expect(2) = 5e-18 Identities = 63/160 (39%), Positives = 88/160 (55%), Gaps = 9/160 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 ++ F KNM+NE L TIC+ HVV+A+ S++GAL + L ELA T ++ K GKL MP Sbjct: 907 IMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMP 966 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILGSSI-DIGDA-SNWQMLSS----*YPSIIQCERS 605 K K YP FM K+A QSY KILG I DA + M++S P + + Sbjct: 967 PHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVD 1026 Query: 604 FEILKSR--VLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 E+ + + +W+ K Y G L G++KVN EE +V Sbjct: 1027 LEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIV 1066 Score = 26.2 bits (56), Expect(2) = 5e-18 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFEEST 351 LKK+F FENL +FE+ T Sbjct: 1095 LKKDFRQVFENLGPEFEQLT 1114 Score = 61.6 bits (148), Expect = 6e-07 Identities = 31/55 (56%), Positives = 40/55 (72%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 IQL++LA T ++FPKTGKLV M LKPK+Y +FM K+ QSY KIL ++ RR Sbjct: 944 IQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRR 998 >ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus] gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase 6 [Cucumis sativus] Length = 1197 Score = 92.8 bits (229), Expect(2) = 5e-18 Identities = 63/160 (39%), Positives = 88/160 (55%), Gaps = 9/160 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 ++ F KNM+NE L TIC+ HVV+A+ S++GAL + L ELA T ++ K GKL MP Sbjct: 907 IMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMP 966 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILGSSI-DIGDA-SNWQMLSS----*YPSIIQCERS 605 K K YP FM K+A QSY KILG I DA + M++S P + + Sbjct: 967 PHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVD 1026 Query: 604 FEILKSR--VLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 E+ + + +W+ K Y G L G++KVN EE +V Sbjct: 1027 LEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIV 1066 Score = 26.2 bits (56), Expect(2) = 5e-18 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFEEST 351 LKK+F FENL +FE+ T Sbjct: 1095 LKKDFRQVFENLGPEFEQLT 1114 Score = 61.6 bits (148), Expect = 6e-07 Identities = 31/55 (56%), Positives = 40/55 (72%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 IQL++LA T ++FPKTGKLV M LKPK+Y +FM K+ QSY KIL ++ RR Sbjct: 944 IQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRR 998 >emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 96.7 bits (239), Expect(2) = 6e-18 Identities = 67/159 (42%), Positives = 84/159 (52%), Gaps = 8/159 (5%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F KNMV E L IC+ HVV+A+ SE+GAL K + L ELA ++ K GKL MP Sbjct: 908 IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILGSSI----DIGDASNWQMLS-S*YPSIIQCERSF 602 K K YP FM K+ FQSY KILG D+ DA P I + + Sbjct: 968 FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTL 1027 Query: 601 EILKSRVL--NSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 I S V ++WN K Y G + L G++KVN EE VV Sbjct: 1028 VIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVV 1066 Score = 21.9 bits (45), Expect(2) = 6e-18 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -2 Query: 410 LKKEFNHFFENLRHDFE 360 L+KEF + FE + DF+ Sbjct: 1095 LRKEFRNVFERMDPDFD 1111 Score = 63.2 bits (152), Expect = 2e-07 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*R--RTTC 174 ++LA+LA ++FPKTGKLV M LKPK+Y +FM K+E QSY KKIL ++ R + C Sbjct: 945 LKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVC 1004 Query: 175 LSSGNFLESLLILTK 219 + G L ++ K Sbjct: 1005 DAEGEVSAGLEVVPK 1019 >gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya] Length = 1195 Score = 90.1 bits (222), Expect(2) = 6e-18 Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 7/158 (4%) Frame = -3 Query: 946 VIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKLANMP 767 +I F KNMV+E L IC+ HVV+A+ SEYGAL + L ELA ++ K GKL MP Sbjct: 909 IIGFFAKNMVHENLGAICNAHVVHADRSEYGALDENCILLAELAAIAVDFPKTGKLVTMP 968 Query: 766 QSFKHKEYPGFMRKQAFQSYNLNKILG------SSIDIGDASNWQMLSS*YPSIIQCERS 605 K K YP FM K+ ++SY NKILG + D SN ++ P ++ Sbjct: 969 SHLKPKIYPDFMGKEDYRSYKSNKILGRLYRRIKDVYNDDTSNADFVTGDIPYDTDLDKP 1028 Query: 604 FEILKSRVLNSWNWKVQYG-LFYSL*GRHKVNFEEVVV 494 +L++W K Y SL G++KV EE +V Sbjct: 1029 GS--AGFLLDAWAQKCLYDWQLTSLLGQYKVKREEEIV 1064 Score = 28.5 bits (62), Expect(2) = 6e-18 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -2 Query: 416 ALLKKEFNHFFENLRHDFEEST 351 ++LKKEF FEN+ +FE+ T Sbjct: 1091 SVLKKEFRQIFENMHPEFEQLT 1112 Score = 58.9 bits (141), Expect = 4e-06 Identities = 29/55 (52%), Positives = 38/55 (69%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 I LA+LA ++FPKTGKLV M LKPK+Y +FM K++ +SY KIL + RR Sbjct: 946 ILLAELAAIAVDFPKTGKLVTMPSHLKPKIYPDFMGKEDYRSYKSNKILGRLYRR 1000 >ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Cicer arietinum] Length = 1201 Score = 96.7 bits (239), Expect = 2e-17 Identities = 67/162 (41%), Positives = 90/162 (55%), Gaps = 7/162 (4%) Frame = -3 Query: 958 TDRHVIYLFMKNMVNEYLDTICDCHVVYANYSEYGALH*KGV*LVELATTIINLSKIGKL 779 T R +I F+KNMVNE+L +IC+ HVV+A+ S+YGAL K + L ELA T ++ K GKL Sbjct: 902 TIRDIIDFFVKNMVNEHLGSICNAHVVHADCSDYGALDEKCIHLAELAATAVDFPKTGKL 961 Query: 778 ANMPQSFKHKEYPGFMRKQAFQSYNLNKILGSSI-DIGDASNWQMLS---S*YPSIIQCE 611 MP K K YP FM K+ QSY KILG I DA + + + + S I + Sbjct: 962 VTMPPHLKPKLYPDFMGKEHHQSYKSKKILGRLYRQIKDAYDKDIDAPDLNCASSDIHYD 1021 Query: 610 RSFEILKSR--VLNSWNWKVQY-GLFYSL*GRHKVNFEEVVV 494 E+ S + ++W K Y G L G++KV EE VV Sbjct: 1022 TDLEVPGSADFISDAWYQKCSYDGQLSGLLGQYKVKTEEEVV 1063 Score = 61.2 bits (147), Expect = 7e-07 Identities = 31/55 (56%), Positives = 39/55 (70%) Frame = +1 Query: 1 IQLAKLATTTINFPKTGKLVNMLQSLKPKVYSNFMRKQELQSYN*KKILDEI*RR 165 I LA+LA T ++FPKTGKLV M LKPK+Y +FM K+ QSY KKIL + R+ Sbjct: 943 IHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEHHQSYKSKKILGRLYRQ 997