BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00019116
         (328 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [A...    88   1e-15
ref|XP_006491677.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_006428441.1| hypothetical protein CICLE_v10011174mg [Citr...    74   2e-11
ref|XP_004305327.1| PREDICTED: putative pentatricopeptide repeat...    74   2e-11
ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citr...    74   3e-11
ref|XP_006415279.1| hypothetical protein EUTSA_v10010030mg [Eutr...    73   4e-11
ref|XP_006826862.1| hypothetical protein AMTR_s00010p00121230, p...    73   5e-11
ref|XP_007035985.1| Tetratricopeptide repeat-like superfamily pr...    73   5e-11
emb|CBI39619.3| unnamed protein product [Vitis vinifera]               73   5e-11
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...    73   5e-11
ref|XP_003516564.2| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
emb|CBI27814.3| unnamed protein product [Vitis vinifera]               72   1e-10
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr...    71   1e-10
ref|XP_006572946.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
gb|EXC31178.1| hypothetical protein L484_004944 [Morus notabilis]      71   2e-10
ref|XP_002521565.1| pentatricopeptide repeat-containing protein,...    71   2e-10

>ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [Amborella trichopoda]
           gi|548843491|gb|ERN03145.1| hypothetical protein
           AMTR_s00003p00103190 [Amborella trichopoda]
          Length = 297

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 37/69 (53%), Positives = 50/69 (72%)
 Frame = -3

Query: 230 NPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQIH 51
           +PF+WNT +R   E +   EA+L Y TMV+E V P+ FTFP VFKAC+ +K ++EG Q+H
Sbjct: 156 HPFIWNTMIRGCSENNALEEAILFYCTMVQEDVQPNNFTFPSVFKACNGIKALKEGEQVH 215

Query: 50  AHVVKHGFM 24
            HV+KHG M
Sbjct: 216 THVIKHGLM 224


>ref|XP_006491677.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568877302|ref|XP_006491678.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X2 [Citrus sinensis]
           gi|568877304|ref|XP_006491679.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X3 [Citrus sinensis]
           gi|568877306|ref|XP_006491680.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 719

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 SKICAKSIESSRNPFVWNTRMRRYIEKDQQIEALLLYITMVKES-VSPDEFTFPLVFKAC 90
           S+I    I++  N F+WNT MR Y   D   EAL+LY +M+ +  VSP+ FTFP V  +C
Sbjct: 61  SRILFSQIDNP-NIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSC 119

Query: 89  SALKKIREGTQIHAHVVKHGFMFVNDVFV 3
           + L   + G QIH H++K G  F  D+F+
Sbjct: 120 ARLSSFKSGCQIHCHIIKFGLEF--DLFI 146


>ref|XP_006428441.1| hypothetical protein CICLE_v10011174mg [Citrus clementina]
           gi|567871705|ref|XP_006428442.1| hypothetical protein
           CICLE_v10011174mg [Citrus clementina]
           gi|557530498|gb|ESR41681.1| hypothetical protein
           CICLE_v10011174mg [Citrus clementina]
           gi|557530499|gb|ESR41682.1| hypothetical protein
           CICLE_v10011174mg [Citrus clementina]
          Length = 719

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 SKICAKSIESSRNPFVWNTRMRRYIEKDQQIEALLLYITMVKES-VSPDEFTFPLVFKAC 90
           S+I    I++  N F+WNT MR Y   D   EAL+LY +M+ +  VSP+ FTFP V  +C
Sbjct: 61  SRILFSQIDNP-NIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSC 119

Query: 89  SALKKIREGTQIHAHVVKHGFMFVNDVFV 3
           + L   + G QIH H++K G  F  D+F+
Sbjct: 120 ARLSSFKSGCQIHCHIIKFGLEF--DLFI 146


>ref|XP_004305327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Fragaria vesca subsp. vesca]
          Length = 518

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 33/79 (41%), Positives = 52/79 (65%)
 Frame = -3

Query: 239 SSRNPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGT 60
           S R+ F+WNT +R Y ++    EA+ LY  M +   SPD +TFP V ++C+    +REGT
Sbjct: 12  SERDVFLWNTLIRGYADRGPCHEAIFLYRKMHQSGFSPDNYTFPFVVRSCAVQSALREGT 71

Query: 59  QIHAHVVKHGFMFVNDVFV 3
           ++H +++K+GF   +DVFV
Sbjct: 72  EVHCNIIKNGFS--SDVFV 88


>ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citrus clementina]
           gi|557532177|gb|ESR43360.1| hypothetical protein
           CICLE_v10011370mg [Citrus clementina]
          Length = 574

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 33/76 (43%), Positives = 50/76 (65%)
 Frame = -3

Query: 230 NPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQIH 51
           N F+WNT ++ Y +  + IE   +++ +++E   PD++TFPLV KACS +  +REGT IH
Sbjct: 100 NTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIH 159

Query: 50  AHVVKHGFMFVNDVFV 3
           A V++ G     DVFV
Sbjct: 160 AAVIRWG--VDEDVFV 173


>ref|XP_006415279.1| hypothetical protein EUTSA_v10010030mg [Eutrema salsugineum]
           gi|557093050|gb|ESQ33632.1| hypothetical protein
           EUTSA_v10010030mg [Eutrema salsugineum]
          Length = 607

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 36/74 (48%), Positives = 47/74 (63%)
 Frame = -3

Query: 224 FVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQIHAH 45
           F +NT +R Y+ +    EAL  Y+ MVK  + PD FT+P + KAC+ L+ I+EG QIH H
Sbjct: 98  FDFNTMIRGYVNETGYEEALWFYVEMVKRGIEPDNFTYPCLLKACTRLRSIQEGKQIHGH 157

Query: 44  VVKHGFMFVNDVFV 3
           V K GF    DVFV
Sbjct: 158 VFKLGFEV--DVFV 169


>ref|XP_006826862.1| hypothetical protein AMTR_s00010p00121230, partial [Amborella
           trichopoda] gi|548831291|gb|ERM94099.1| hypothetical
           protein AMTR_s00010p00121230, partial [Amborella
           trichopoda]
          Length = 135

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/67 (50%), Positives = 44/67 (65%)
 Frame = -3

Query: 227 PFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQIHA 48
           PF+WNT +R Y +      AL LY  M   +V PDEFTFP V KAC+ L   REG+Q+HA
Sbjct: 16  PFIWNTLIRSYYKTHLFSHALSLYDQMHVSNVRPDEFTFPFVLKACAGLIAQREGSQVHA 75

Query: 47  HVVKHGF 27
            ++K+GF
Sbjct: 76  LIIKYGF 82


>ref|XP_007035985.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
           gi|508715014|gb|EOY06911.1| Tetratricopeptide
           repeat-like superfamily protein [Theobroma cacao]
          Length = 628

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 30/66 (45%), Positives = 46/66 (69%)
 Frame = -3

Query: 224 FVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQIHAH 45
           F++NT +R Y+++ Q    +L Y+ M++ SV P++FTFP + +ACS    I +G+QIHAH
Sbjct: 90  FIYNTLIRGYLQRQQPTHCILFYLQMLQHSVFPNKFTFPCLIRACSLANAIEQGSQIHAH 149

Query: 44  VVKHGF 27
           V K GF
Sbjct: 150 VFKFGF 155


>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 40/81 (49%), Positives = 54/81 (66%)
 Frame = -3

Query: 245 IESSRNPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIRE 66
           IE+S N F+WNT MR YI+ +   +ALLLY  MVK +V PD +T+PLV +AC+       
Sbjct: 89  IENS-NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFG 147

Query: 65  GTQIHAHVVKHGFMFVNDVFV 3
           G +IH HV+K G  F +DV+V
Sbjct: 148 GKEIHDHVLKVG--FDSDVYV 166


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 40/81 (49%), Positives = 54/81 (66%)
 Frame = -3

Query: 245 IESSRNPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIRE 66
           IE+S N F+WNT MR YI+ +   +ALLLY  MVK +V PD +T+PLV +AC+       
Sbjct: 101 IENS-NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFG 159

Query: 65  GTQIHAHVVKHGFMFVNDVFV 3
           G +IH HV+K G  F +DV+V
Sbjct: 160 GKEIHDHVLKVG--FDSDVYV 178


>ref|XP_003516564.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 580

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/71 (47%), Positives = 43/71 (60%)
 Frame = -3

Query: 239 SSRNPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGT 60
           SS N  +WNT +R Y   +    ALLLY  M+  SV  + +TFP + KACSAL    E  
Sbjct: 135 SSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQ 194

Query: 59  QIHAHVVKHGF 27
           QIHAH++K GF
Sbjct: 195 QIHAHIIKRGF 205


>ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 30/77 (38%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = -3

Query: 230 NPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSP-DEFTFPLVFKACSALKKIREGTQI 54
           N F+WNT +R Y   D   EA++LY++M+ + ++P + FTFP +  +C+ L  +  G ++
Sbjct: 74  NLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEV 133

Query: 53  HAHVVKHGFMFVNDVFV 3
           H+H++KHG  F +D+FV
Sbjct: 134 HSHIIKHG--FESDLFV 148


>ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 604

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 36/74 (48%), Positives = 46/74 (62%)
 Frame = -3

Query: 224 FVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQIHAH 45
           F +NT +R  +      EALLLY+ M++  + PD FT+P V KACS L  ++EG QIHAH
Sbjct: 96  FEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAH 155

Query: 44  VVKHGFMFVNDVFV 3
           V K G     DVFV
Sbjct: 156 VFKAG--LEGDVFV 167


>emb|CBI27814.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = -3

Query: 233 RNPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQI 54
           R+ F+WNT +R Y +     EAL LY  M    + PD +TFP V ++C+ L  +REG ++
Sbjct: 91  RDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEV 150

Query: 53  HAHVVKHGFMFVNDVFV 3
           H ++VKHG  F +DVFV
Sbjct: 151 HCNIVKHG--FDSDVFV 165


>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = -3

Query: 233 RNPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQI 54
           R+ F+WNT +R Y +     EAL LY  M    + PD +TFP V ++C+ L  +REG ++
Sbjct: 91  RDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEV 150

Query: 53  HAHVVKHGFMFVNDVFV 3
           H ++VKHG  F +DVFV
Sbjct: 151 HCNIVKHG--FDSDVFV 165


>ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 608

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/77 (42%), Positives = 48/77 (62%)
 Frame = -3

Query: 233 RNPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQI 54
           R+ F WNT +R Y       E++ LY  M  + + PD +TFP V ++CS L  +REG +I
Sbjct: 95  RDVFAWNTLIRGYSNLGPCQESIFLYKEMHLQGILPDNYTFPFVLRSCSVLSALREGREI 154

Query: 53  HAHVVKHGFMFVNDVFV 3
           H +++KHG  F +DVFV
Sbjct: 155 HCNIIKHG--FESDVFV 169


>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
           gi|568824869|ref|XP_006466814.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
           gi|557527644|gb|ESR38894.1| hypothetical protein
           CICLE_v10025166mg [Citrus clementina]
          Length = 622

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/68 (47%), Positives = 44/68 (64%)
 Frame = -3

Query: 230 NPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQIH 51
           N F+WNT +R Y +  +  +ALLLY  M+  SVS + +TFP + KACS L  + E  QIH
Sbjct: 82  NTFMWNTMVRGYADSSEPEQALLLYRQMLSHSVSHNAYTFPFLLKACSRLSALEETQQIH 141

Query: 50  AHVVKHGF 27
           A ++K GF
Sbjct: 142 AQIIKFGF 149


>ref|XP_006572946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 36/74 (48%), Positives = 46/74 (62%)
 Frame = -3

Query: 224 FVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIREGTQIHAH 45
           F +NT +R  +      EALLLY+ M++  + PD FT+P V KACS L  ++EG QIHAH
Sbjct: 97  FEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAH 156

Query: 44  VVKHGFMFVNDVFV 3
           V K G     DVFV
Sbjct: 157 VFKAGLEV--DVFV 168


>gb|EXC31178.1| hypothetical protein L484_004944 [Morus notabilis]
          Length = 745

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/81 (43%), Positives = 55/81 (67%)
 Frame = -3

Query: 245 IESSRNPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACSALKKIRE 66
           IE+S N F+WNT MR Y++++   +A+ L+  M++E+V PD +T+P++  AC+      E
Sbjct: 38  IENS-NGFIWNTMMRAYVQRNCPQKAVYLFKCMLEENVGPDNYTYPILIHACAIRLSENE 96

Query: 65  GTQIHAHVVKHGFMFVNDVFV 3
           G QIH+HV K G  F +DV+V
Sbjct: 97  GKQIHSHVFKVG--FDSDVYV 115


>ref|XP_002521565.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539243|gb|EEF40836.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 338

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 32/80 (40%), Positives = 50/80 (62%)
 Frame = -3

Query: 266 SKICAKSIESSRNPFVWNTRMRRYIEKDQQIEALLLYITMVKESVSPDEFTFPLVFKACS 87
           +KI   S+ S  N ++WN  +R Y + ++  EAL+LY  M+  SV  + +TFP + KACS
Sbjct: 63  AKIVFDSLSSRPNTYIWNAMLRGYADSNKPEEALILYHQMLCHSVPHNGYTFPFLLKACS 122

Query: 86  ALKKIREGTQIHAHVVKHGF 27
           +L  I +  Q+HA ++K GF
Sbjct: 123 SLSAIEKAQQVHAQIIKLGF 142