BLASTX nr result
ID: Sinomenium21_contig00019066
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00019066
(456 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 81 2e-13
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 79 9e-13
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 78 1e-12
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea] 77 3e-12
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun... 74 2e-11
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu... 72 8e-11
gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus... 71 2e-10
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ... 70 2e-10
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 69 5e-10
emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera] 69 5e-10
ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isof... 68 2e-09
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof... 68 2e-09
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [... 67 3e-09
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 64 3e-08
ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citr... 62 8e-08
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr... 62 8e-08
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 62 1e-07
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea] 62 1e-07
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 60 4e-07
emb|CBL69150.1| RNA polymerase [Nuphar advena] 59 7e-07
>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 973
Score = 80.9 bits (198), Expect = 2e-13
Identities = 55/154 (35%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Frame = -2
Query: 413 LASTASFSYPPRTLIHDKWPREALMRKKCLRNQHFLFNSRRDVQFRNLKVREPACFHSP- 237
+ASTAS S T H L K L+ HFLFNS + K + H P
Sbjct: 1 MASTASSSISA-TATHSWRRPPKLNPTKSLKTLHFLFNSTSNSNSLFFKPSLSSSTHFPL 59
Query: 236 SLQSPT-------LSDPIHEDLAQDFQESVK--------RVFVEDPPWLSSFTSTDNLGE 102
SL+ P L+D + ++L ++ + S+K R+F++DPPW++S +
Sbjct: 60 SLRPPPDPIQFHPLNDSVQDNLVENLENSIKFQVPISEPRIFIQDPPWIASLFLKGMFKK 119
Query: 101 --SDAKLGFKELERKKYNALRRRQVKMETEAWEK 6
+ K+ KE++R+KYN LRRRQ+K ETEAWEK
Sbjct: 120 VNKELKVESKEIDRRKYNLLRRRQIKAETEAWEK 153
>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 78.6 bits (192), Expect = 9e-13
Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Frame = -2
Query: 413 LASTASFSYPPRTLIH--DKWPREALMRKKCLRNQHFLFNSRRDVQFRNLKVREPACFHS 240
+ +TASF + IH + W ++ R KC R H F S + ++ S
Sbjct: 1 MTATASFFPTLQAPIHGSNAW-KKPTKRWKCERKTHTSFTSTFNSPLSSVSFPVNFDSTS 59
Query: 239 PSLQSPTLSDPIHEDLAQDFQ------------------ESVKRVFVEDPPWLSSF--TS 120
SL L+D +HE+ + ES KR+F++DPPW++S
Sbjct: 60 QSLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKG 119
Query: 119 TDNLGESDAKLGFKELERKKYNALRRRQVKMETEAWEK 6
+ + KL F E+E++KYN LRRRQ+K ETEAWEK
Sbjct: 120 LYKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEK 157
>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 77.8 bits (190), Expect = 1e-12
Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Frame = -2
Query: 413 LASTASFSYPPRTLIH--DKWPREALMRKKCLRNQHFLFNSRRDVQFRNLKVREPACFHS 240
+ +TASF + IH + W ++ R KC R H F S + ++ S
Sbjct: 1 MTATASFFPTLQAPIHGSNAW-KKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTS 59
Query: 239 PSLQSPTLSDPIHEDLAQDFQ------------------ESVKRVFVEDPPWLSSF--TS 120
SL L+D +HE+ + ES KR+F++DPPW++S
Sbjct: 60 QSLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKG 119
Query: 119 TDNLGESDAKLGFKELERKKYNALRRRQVKMETEAWEK 6
+ + KL F E+E++KYN LRRRQ+K ETEAWEK
Sbjct: 120 LYKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEK 157
>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
Length = 989
Score = 77.0 bits (188), Expect = 3e-12
Identities = 58/170 (34%), Positives = 81/170 (47%), Gaps = 35/170 (20%)
Frame = -2
Query: 413 LASTASFSYPPRTLIHDKWPREALMRKKCLRNQHF-LFNSRRDVQFR------------- 276
++STASFS P+ I +W + KK + HF LF Q R
Sbjct: 1 MSSTASFSPIPQVQIQKQWRKPLKSHKKASKTTHFSLFIPLSSKQLRIEHPLFPSSSSSS 60
Query: 275 -------NLKVREP----ACFHSPSLQSPTLSDPIHEDLAQD----FQESVK-----RVF 156
+L P F PS QS + D E+LA+ F+ S K R+F
Sbjct: 61 NSFPSTLSLPSLTPKLGKTSFFQPSPQSQIILDSPEEELAEKMDGHFRNSDKIKGSSRIF 120
Query: 155 VEDPPWLSSFTSTDNLGESDA-KLGFKELERKKYNALRRRQVKMETEAWE 9
++DPPW+++ + + +L FKE+ER+KYN LRRRQ+K ETEAWE
Sbjct: 121 MQDPPWVNTLFMKGLVDSNTGLRLEFKEIEREKYNLLRRRQIKAETEAWE 170
>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
gi|462398756|gb|EMJ04424.1| hypothetical protein
PRUPE_ppa000868mg [Prunus persica]
Length = 976
Score = 74.3 bits (181), Expect = 2e-11
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 28/164 (17%)
Frame = -2
Query: 413 LASTASFSYPPRTLIH---DKWPREALMRKKCLRNQHFLFNSRRDVQFRNLKVREPACFH 243
+ASTASFS P+ + +W + + N FLF+S + F K + H
Sbjct: 1 MASTASFSPSPQAQTYTCSSRWSKAPKL------NHKFLFSSTSNSLF--FKPSHSSSTH 52
Query: 242 SP--------SLQSPTLSDPIHEDLAQDF---------------QESVKRVFVEDPPWLS 132
P + P L D I +++ ++ QES R+F++DPPW++
Sbjct: 53 FPLNLKPPPEPVHIPPLRDSIQDNIVENSMNFQIPMSEFHLITPQESAPRIFIQDPPWIA 112
Query: 131 SF--TSTDNLGESDAKLGFKELERKKYNALRRRQVKMETEAWEK 6
S + KL KE+ER+ YN LRRRQ+K ETEAWE+
Sbjct: 113 SLFLKGIYKRANQELKLESKEIERRNYNVLRRRQIKAETEAWER 156
>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
gi|222854390|gb|EEE91937.1| hypothetical protein
POPTR_0006s19490g [Populus trichocarpa]
Length = 982
Score = 72.0 bits (175), Expect = 8e-11
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 31/167 (18%)
Frame = -2
Query: 413 LASTASFSYPPRTLIHDKWPREALMR-KKCLRNQHFLFN------SRRDVQFRNLKVREP 255
+AST FS + H W ++ + +N HFL N S + + +
Sbjct: 1 MASTTPFS-----IQHPTWTTSKTLKFHEPYKNLHFLSNPSSHSLSNPSLSSSSFPLNPK 55
Query: 254 ACFHSPSLQSPTLSDPIHEDLAQDFQ----------------------ESVKRVFVEDPP 141
+P L L D H+ L +DF+ ES KRVF+ D P
Sbjct: 56 LSILNPPLLFHPLHDSSHDRLLEDFEIPTINNHQKLETLIKFDQIVHGESSKRVFIRDSP 115
Query: 140 WLSS--FTSTDNLGESDAKLGFKELERKKYNALRRRQVKMETEAWEK 6
W+S+ + T + KL K++E++KYN LRRRQ++ ETEAWE+
Sbjct: 116 WISALYWKGTHKIANKKVKLELKDIEKRKYNLLRRRQIREETEAWER 162
>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus]
Length = 941
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Frame = -2
Query: 278 RNLKVREPACFHSPSLQSPTLSDPIHE------DLAQDFQESVKRVFVEDPPWLSSFTST 117
+NLK+ P+ + L P +SD + D QES RVF++DPPW+SS
Sbjct: 22 QNLKL--PSLHNPALLLPPPVSDSSDDNFRGNLDKVATLQESKDRVFIQDPPWISSLFMK 79
Query: 116 DNLGES----DAKLGFKELERKKYNALRRRQVKMETEAWEKR 3
+ L S K+ F+E+ER+KY LRRRQVK ETEAWE +
Sbjct: 80 NLLFRSRNRGGVKIEFQEMERRKYYLLRRRQVKAETEAWENK 121
>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
[Ricinus communis] gi|223532193|gb|EEF33998.1|
DNA-directed RNA polymerase 3B, chloroplast precursor,
putative [Ricinus communis]
Length = 1000
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = -2
Query: 179 QESVKRVFVEDPPWLSS--FTSTDNLGESDAKLGFKELERKKYNALRRRQVKMETEAWEK 6
+ES +RVF++DPPW+S+ F + + KL FK++E++KYN LRRRQ++ ETEAWE+
Sbjct: 108 EESSRRVFIQDPPWISALFFKGLYKIPNKEVKLEFKDIEKRKYNLLRRRQIREETEAWER 167
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 69.3 bits (168), Expect = 5e-10
Identities = 55/163 (33%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Frame = -2
Query: 413 LASTASFSYPPRTLIHDKWPREALMRKKCLRNQHFLFNSRRDVQFRNLKVREPAC----- 249
+ASTA F P I + L K R LF S F + + +
Sbjct: 1 MASTAVFLPIPHAKIQKP---KKLDHHKPHRTLPVLFTSNPSPHFHTSTISKNSLSSSSF 57
Query: 248 ---FHSPSLQS------------PTLS--DPIHEDLAQDFQESVKRVFVEDPPWLSSFTS 120
FHSPS S PT + + + + +ES+ R+FV+DPPW+SSF
Sbjct: 58 RHNFHSPSHSSNSEAQCHALPLSPTNNSIETLQDSSNIQVKESIPRIFVQDPPWISSFLF 117
Query: 119 TDNLGES-----DAKLGFKELERKKYNALRRRQVKMETEAWEK 6
D + + KL F+E ER+ Y LRRRQVK ETEAWE+
Sbjct: 118 HDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEAWER 160
>emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]
Length = 1312
Score = 69.3 bits (168), Expect = 5e-10
Identities = 55/163 (33%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Frame = -2
Query: 413 LASTASFSYPPRTLIHDKWPREALMRKKCLRNQHFLFNSRRDVQFRNLKVREPAC----- 249
+ASTA F P I + L K R LF S F + + +
Sbjct: 1 MASTAVFLPIPHAKIQKP---KKLDHHKPHRTLPVLFTSNPSPHFHTSTISKNSLSSSSF 57
Query: 248 ---FHSPSLQS------------PTLS--DPIHEDLAQDFQESVKRVFVEDPPWLSSFTS 120
FHSPS S PT + + + + +ES+ R+FV+DPPW+SSF
Sbjct: 58 RHNFHSPSHSSNSEAQCHALPLSPTNNSIETLQDSSNIQVKESIPRIFVQDPPWISSFLF 117
Query: 119 TDNLGES-----DAKLGFKELERKKYNALRRRQVKMETEAWEK 6
D + + KL F+E ER+ Y LRRRQVK ETEAWE+
Sbjct: 118 HDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEAWER 160
>ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
gi|508784242|gb|EOY31498.1| DNA/RNA polymerases
superfamily protein isoform 3 [Theobroma cacao]
Length = 927
Score = 67.8 bits (164), Expect = 2e-09
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = -2
Query: 266 VREPACFHSPSLQSPTLSDPIHEDLAQDFQESVKRVFVEDPPWLSSF--TSTDNLGESDA 93
+ P+ F P QS + P ES R+F++DPPW+S+ +
Sbjct: 79 IENPSNFLLPKAQSHQILSP----------ESTPRLFIQDPPWISALFLKGLYKMTNQTV 128
Query: 92 KLGFKELERKKYNALRRRQVKMETEAWEK 6
K+ KE+E++KYN LRRRQVK ETEAWEK
Sbjct: 129 KIEHKEIEKRKYNLLRRRQVKEETEAWEK 157
>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 67.8 bits (164), Expect = 2e-09
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = -2
Query: 266 VREPACFHSPSLQSPTLSDPIHEDLAQDFQESVKRVFVEDPPWLSSF--TSTDNLGESDA 93
+ P+ F P QS + P ES R+F++DPPW+S+ +
Sbjct: 79 IENPSNFLLPKAQSHQILSP----------ESTPRLFIQDPPWISALFLKGLYKMTNQTV 128
Query: 92 KLGFKELERKKYNALRRRQVKMETEAWEK 6
K+ KE+E++KYN LRRRQVK ETEAWEK
Sbjct: 129 KIEHKEIEKRKYNLLRRRQVKEETEAWEK 157
>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 882
Score = 67.0 bits (162), Expect = 3e-09
Identities = 29/59 (49%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Frame = -2
Query: 176 ESVKRVFVEDPPWLSS--FTSTDNLGESDAKLGFKELERKKYNALRRRQVKMETEAWEK 6
ES K+VF++DPPW+S+ + L K+ FK++E++KYN LRRRQ++ ETEAWE+
Sbjct: 4 ESSKKVFIQDPPWISAHFWKGMYKLANKKVKVEFKDIEKRKYNLLRRRQIREETEAWER 62
>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Solanum lycopersicum]
Length = 1007
Score = 63.5 bits (153), Expect = 3e-08
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Frame = -2
Query: 416 ELASTASFSYPPRTLIHDKWPREALMRKKC----LRNQHFLFNSRRDVQFRNLK---VRE 258
+LAS+AS+S P + +W + +K C + NQ FL S+ + LK ++
Sbjct: 29 KLASSASYSPTPAS---SQWRKAQKSQKNCTFHGIYNQEFLKLSQTSSFPKTLKLPIIQL 85
Query: 257 PACFHSPSLQSPTLSDPIHEDLAQDFQESV------------------KRVFVEDPPWLS 132
P HS + T E+L ++ +E V KRVF++DPPW+S
Sbjct: 86 PITVHSEVVCVST-----DENLTENLEELVNLQKIPNGYPLVLQKESNKRVFIQDPPWVS 140
Query: 131 SFTSTDNLGESDAKLG----FKELERKK-YNALRRRQVKMETEAWEK 6
S + + G F+E+ER++ Y LRRRQ+K ETEAWE+
Sbjct: 141 SLFMNNLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEAWEQ 187
>ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
gi|557556793|gb|ESR66807.1| hypothetical protein
CICLE_v10007333mg [Citrus clementina]
Length = 986
Score = 62.0 bits (149), Expect = 8e-08
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Frame = -2
Query: 410 ASTASFSYPPRTLIHDKWPREALMRKKCLRNQ---HFLFNSRRDVQFRNLKVREPACFHS 240
+S++S S+P P +R + L++ +F+ N V F + FH
Sbjct: 52 SSSSSSSFPVNLKSSSSKPTR--LRPRPLQDSIQSNFMENIENSVDFHIPTCEQEQNFHQ 109
Query: 239 PSLQSPTLSDPI--HEDLAQDFQ----ESVKRVFVEDPPWLSSFTSTDNLGESDAKLGFK 78
T +DP+ + + + Q E +R+FV+DPPW SS L + ++
Sbjct: 110 RVENIETCADPVIPRSENSTNHQLMCLEPRRRIFVQDPPWFSSIF-LKGLYKRIKLQEYR 168
Query: 77 ELERKKYNALRRRQVKMETEAWEK 6
E++++K+N LRRRQVK ETEAWE+
Sbjct: 169 EMKKRKFNLLRRRQVKQETEAWER 192
>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
gi|557556792|gb|ESR66806.1| hypothetical protein
CICLE_v10007333mg [Citrus clementina]
Length = 1012
Score = 62.0 bits (149), Expect = 8e-08
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Frame = -2
Query: 410 ASTASFSYPPRTLIHDKWPREALMRKKCLRNQ---HFLFNSRRDVQFRNLKVREPACFHS 240
+S++S S+P P +R + L++ +F+ N V F + FH
Sbjct: 52 SSSSSSSFPVNLKSSSSKPTR--LRPRPLQDSIQSNFMENIENSVDFHIPTCEQEQNFHQ 109
Query: 239 PSLQSPTLSDPI--HEDLAQDFQ----ESVKRVFVEDPPWLSSFTSTDNLGESDAKLGFK 78
T +DP+ + + + Q E +R+FV+DPPW SS L + ++
Sbjct: 110 RVENIETCADPVIPRSENSTNHQLMCLEPRRRIFVQDPPWFSSIF-LKGLYKRIKLQEYR 168
Query: 77 ELERKKYNALRRRQVKMETEAWEK 6
E++++K+N LRRRQVK ETEAWE+
Sbjct: 169 EMKKRKFNLLRRRQVKQETEAWER 192
>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Solanum tuberosum]
Length = 1015
Score = 61.6 bits (148), Expect = 1e-07
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 27/164 (16%)
Frame = -2
Query: 416 ELASTASFSYPPRTLIHDKWPREALMRKKC----LRNQHFLFNSRRDVQFRNLKVREPAC 249
+LAS+AS+S P + +W + +K C + +Q FL S+ + LK+ P
Sbjct: 37 KLASSASYSPSPPS---SQWRKTQKSQKNCFLYGIHSQEFLKLSQTSSFPKTLKL--PVI 91
Query: 248 FHSPSLQSPTLSDPIHEDLAQDFQESV------------------KRVFVEDPPWLSSFT 123
++ S + E+L ++ +E V KRVF++DPPW+SS
Sbjct: 92 QLPITVHSEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQKESNKRVFIQDPPWVSSLF 151
Query: 122 STDNLGESDAKLG----FKELERKK-YNALRRRQVKMETEAWEK 6
+ G F+E+ER++ Y LRRRQ+K ETEAWE+
Sbjct: 152 MNSLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEAWEQ 195
>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
Length = 952
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Frame = -2
Query: 206 IHEDLAQDFQESVKRVFVEDPPWLSSFTSTD----NLGESDAKLGFKELERKKYNALRRR 39
I + +++ ++ V V ++DPPW+SS N D K+ FKE+ER KY LRRR
Sbjct: 65 ISSEFSKELRDRV--VIIQDPPWISSLYIKSLLFRNRNRCDVKIEFKEMERHKYYELRRR 122
Query: 38 QVKMETEAWE 9
Q+K ETEAWE
Sbjct: 123 QIKAETEAWE 132
>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Citrus sinensis]
Length = 1009
Score = 59.7 bits (143), Expect = 4e-07
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Frame = -2
Query: 410 ASTASFSYPPRTLIHDKWPREALMRKKCLRNQHFLFNSRRDVQFRNLKVREPACFHSPSL 231
+S++S S+P P + +++ +F+ N V F + FH
Sbjct: 51 SSSSSSSFPVNLKSSSSNPTRLRPLQDSIQS-NFMENIENSVDFHIPTCEQEQIFHQRVE 109
Query: 230 QSPTLSDPI--HEDLAQDFQ----ESVKRVFVEDPPWLSSFTSTDNLGESDAKLGFKELE 69
+ T +D + + + + Q E +R+FV+DPPW SS L + ++E++
Sbjct: 110 NTETCADLVIPRSENSTNHQLMCLEPRRRIFVQDPPWFSSIF-LKGLYKRIKLQEYREMK 168
Query: 68 RKKYNALRRRQVKMETEAWEK 6
++K+N LRRRQVK ETEAWE+
Sbjct: 169 KRKFNLLRRRQVKQETEAWER 189
>emb|CBL69150.1| RNA polymerase [Nuphar advena]
Length = 985
Score = 58.9 bits (141), Expect = 7e-07
Identities = 49/143 (34%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 392 SYPPRTLIHDKWPREALMRKKCLRNQHFLFNSRR---DVQFRNLKVREPACFHSPSLQSP 222
S PP L +PR ++ R C++ F+F+S FRNL + + P +P
Sbjct: 30 SSPPLPL----FPRTSVCR--CIQTNPFIFSSSEFEDRSHFRNLLLYLFPSSNFPPSLTP 83
Query: 221 TLSDPIHEDLAQDF------------QESVKRVFVEDPPWLSSFTSTDNLGESDAKLGFK 78
+D + + A F +E RVF+ DPPWL + E +
Sbjct: 84 IDADLVLDPAADGFRWTARRVREILPEEIPPRVFLLDPPWLPGGL----VQERGRPARER 139
Query: 77 ELERKKYNALRRRQVKMETEAWE 9
E E KYN LRRRQVKMETEAWE
Sbjct: 140 ERESSKYNLLRRRQVKMETEAWE 162