BLASTX nr result
ID: Sinomenium21_contig00018898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00018898
(1325 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 541 e-151
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 535 e-150
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 528 e-147
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 518 e-144
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 516 e-143
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 515 e-143
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 514 e-143
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 514 e-143
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 512 e-142
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 509 e-142
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th... 508 e-141
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 507 e-141
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 506 e-140
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 501 e-139
ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phas... 501 e-139
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 493 e-138
ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 496 e-138
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 496 e-138
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 494 e-137
ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 491 e-136
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 541 bits (1394), Expect = e-151
Identities = 258/377 (68%), Positives = 307/377 (81%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIFVPK RVLIGC+DETG+L YGQVY+RVT+ + E +CR+Q+F+QKVD+TTSVV+GKV+V
Sbjct: 714 RIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHKCRNQSFFQKVDDTTSVVIGKVIV 773
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGDIRVL AVYE EEKGLVDCI+FP+KGERPH NECSGGDLDGD +F CWD
Sbjct: 774 TKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWD 833
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+ LIP T+ PMDY RR RIMDH+VTLEEIQKFFVDYMINDTLG+ISTAHLVHADREPE
Sbjct: 834 EGLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPE 893
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KARS KCL LA LHSMAVDFAKTGAPAEMPRVL PKE+PDFMER D+ Y S G LGKLY
Sbjct: 894 KARSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLY 953
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ + + N +S + S I AYD DLE +GFE FL+ A+ HK Y EK+ LMN++G
Sbjct: 954 RATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYG 1013
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A++E+E+LTGNLR + +YLQRD +++ EMKDRIL+SVK LQKE K W +GSC+ H++ KM
Sbjct: 1014 AESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKM 1073
Query: 1088 ASAWW*HLA*HKVSQKQ 1138
ASAW+ H+ H Q
Sbjct: 1074 ASAWY-HVTYHSTFSSQ 1089
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 535 bits (1378), Expect(2) = e-150
Identities = 251/365 (68%), Positives = 305/365 (83%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RI+VPKGR+LIGC DETG+L YGQV++RVT+ R ELE +DQ+F+ +VD+ TS+V GKV+V
Sbjct: 730 RIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELESKDQSFFHRVDDKTSIVKGKVLV 789
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL+AVYE EEK VDCI+FP+KGERPH NECSGGDLDGD++F WD
Sbjct: 790 TKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPNECSGGDLDGDIFFISWD 849
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
++LIP T+ PMDY GRRSRIMDH+VTLEEI KFFVDYMINDTLG ISTAHLVHADR+P+
Sbjct: 850 NDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAISTAHLVHADRDPD 909
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KARS KCL LA LHSMAVDFAKTGAPAEMP L PKE+PDFMERED+ Y S GVLGKLY
Sbjct: 910 KARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRYISFGVLGKLY 969
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ + ++ + S++I SE+IA+ +YD DLE +GFEAFL AESHK Y E++ ALMNY+G
Sbjct: 970 RATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEEEMNALMNYYG 1029
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A TE+EILTGNLR R YLQRD ++YG+MKDRIL+S K LQ E K WF SC+++E+ ++
Sbjct: 1030 ASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEWFGSSCKENEHPQL 1089
Query: 1088 ASAWW 1102
ASAW+
Sbjct: 1090 ASAWY 1094
Score = 24.3 bits (51), Expect(2) = e-150
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 1101 GDILLNIKSARNRR 1142
GDILLNIKS +R+
Sbjct: 1117 GDILLNIKSVNSRK 1130
>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 528 bits (1361), Expect = e-147
Identities = 251/371 (67%), Positives = 304/371 (81%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIFVPKG+VLIGC+DETG+L YGQVY+R+T+K+ ELE +Q+F++KVD+ TS+V+GKVVV
Sbjct: 712 RIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAELEAGNQSFFRKVDDETSIVVGKVVV 771
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL+AVY+ EE+GLVDC+VFP+KGERPH NECSGGDLDGDL+F WD
Sbjct: 772 TKNPCLHPGDVRVLEAVYDAKLEEEGLVDCLVFPQKGERPHPNECSGGDLDGDLFFISWD 831
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
NLIP T PMDYIGRR RIMDH+VTLEEIQKFFVDYMINDTLG ISTAHL+HADREPE
Sbjct: 832 TNLIPPRTTAPMDYIGRRPRIMDHDVTLEEIQKFFVDYMINDTLGGISTAHLIHADREPE 891
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KA S CL+LA LHSMAVDFAKTGAPAEMPR L P++YPDFMER DR Y S G LGKLY
Sbjct: 892 KAFSENCLQLATLHSMAVDFAKTGAPAEMPRALRPRDYPDFMERLDRPMYVSNGALGKLY 951
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ + + S+ + SE+ A+ AYD DLE NGFE F+ AESH+ Y++K+ +MNY+
Sbjct: 952 RATVESESQGSSNLVWSEKTAEAAYDRDLEVNGFEEFIALAESHRDMYIDKMNGIMNYYE 1011
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
++E+E+LTGNLR R YLQRD ++Y E+KDRIL++VK LQ+E KGWF GSCE E KM
Sbjct: 1012 LESEDEVLTGNLRKRAAYLQRDNRRYFEVKDRILLAVKSLQREAKGWFEGSCEAMEQQKM 1071
Query: 1088 ASAWW*HLA*H 1120
ASAW+ H+ H
Sbjct: 1072 ASAWY-HVTYH 1081
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
Length = 1119
Score = 518 bits (1335), Expect = e-144
Identities = 244/371 (65%), Positives = 300/371 (80%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIF+PKGR+L+GC+DETG+L YGQVY+R+T+ + EL+ Q F+QKVDETT+VV GKVVV
Sbjct: 716 RIFIPKGRILVGCLDETGILKYGQVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVV 775
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL+AVYE EEK VDCI+FP+KGERPH NECSGGDLDGDLYF CWD
Sbjct: 776 TKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQKGERPHPNECSGGDLDGDLYFICWD 835
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
++LIP T TPMDY GRR RIMDHEVTLEEIQ+FFVDYMI+DTLG ISTAHLVHADREP+
Sbjct: 836 ESLIPCQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPD 895
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KA + KCL+LA LHSMAVDFAKTGA AEMPR L P+E+PDFMER D+ Y S GVLGKLY
Sbjct: 896 KALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLY 955
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
+ M + SD + ++R + AYD DL G+EAF ++A++HK Y++ + +L+NY+G
Sbjct: 956 RGVMKSYIRRNSDDLSADRAIQDAYDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYYG 1015
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A+ E EILTGNLR + +YLQRD ++Y E+KDRILVS K L KEVKGWF C++ ++ K+
Sbjct: 1016 AEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFTSCCQEDDHQKL 1075
Query: 1088 ASAWW*HLA*H 1120
ASAW+ H+ H
Sbjct: 1076 ASAWY-HVTYH 1085
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 516 bits (1328), Expect = e-143
Identities = 247/371 (66%), Positives = 300/371 (80%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIFVPKGR+L+GC+DETG+L YGQVY +TL + EL+ R+Q ++ +DET S+++GKVVV
Sbjct: 714 RIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVVV 773
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL+A++ EEKGLVDC++FP+KG RPHTNECSGGDLDGDLYF WD
Sbjct: 774 TKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWD 833
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+NLIP T+ PMDY GRR RIMDH+V LEEIQKFFVDYMINDTLG ISTAHLVHADREP+
Sbjct: 834 ENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPK 893
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KA S KCL LA LHSMAVDFAKTGAPAEMPRVL P+E+PDFMER D+ Y S+ VLGKLY
Sbjct: 894 KALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLY 953
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++A+ ++E S + SE A+ YD DLE +GFEAFL+ AE++K Y+EK+ LMNY+G
Sbjct: 954 RAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYG 1013
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A+ E+EIL G+LR R YLQRD +KYG+MKDRIL+SVK L+KEVK WF SC+ M
Sbjct: 1014 AEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMM 1073
Query: 1088 ASAWW*HLA*H 1120
ASAW+ H+ H
Sbjct: 1074 ASAWY-HVTYH 1083
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 515 bits (1327), Expect = e-143
Identities = 244/371 (65%), Positives = 303/371 (81%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIF+ KGRVL+GC+DETG+L YGQVY R+T+ + EL+ Q+F+QKVDETT+VV G VVV
Sbjct: 717 RIFIHKGRVLVGCLDETGILNYGQVYARITMTKAELQSAQQSFFQKVDETTAVVRGNVVV 776
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL+AVYE EEK VDCI+FP+KGERPH NECSGGDLDGDLYF WD
Sbjct: 777 TKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWD 836
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+NLIP T TPMDY GRR+RIMDHEVTL+EIQ+FFVDYMI+DTLG ISTAHLVHADREP+
Sbjct: 837 ENLIPRQTVTPMDYTGRRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADREPD 896
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KA +PKCL+LA LHSMAVDFAKTGA AEMPR L P+E+PDF+ER D+ Y S GVLGKLY
Sbjct: 897 KALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLY 956
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ + + SD + S R + AYD L +G+EAF+++A++HK Y++++ +L+NY+G
Sbjct: 957 RAIVNSSVRSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYG 1016
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A+ E EILTGNLR + +YLQRD ++Y E+KDRILVS K LQKEVKGWF G C++ E+ K+
Sbjct: 1017 AEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKL 1076
Query: 1088 ASAWW*HLA*H 1120
ASAW+ H+ H
Sbjct: 1077 ASAWY-HVTYH 1086
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 514 bits (1323), Expect(2) = e-143
Identities = 241/371 (64%), Positives = 299/371 (80%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIF+PKGR+L+GC+DETG+L YG+VY+R+T+ + EL+ Q F+QKVDETT+VV GKVVV
Sbjct: 716 RIFIPKGRILVGCLDETGILKYGEVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVV 775
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL+AVYE EEK VDCI+FP+ GERPH NECSGGDLDGDLYF CWD
Sbjct: 776 TKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQNGERPHPNECSGGDLDGDLYFICWD 835
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
++LIP T TPMDY GRR RIMDHEVTLEEIQ+FFVDYMI+DTLG ISTAHLVHADREP+
Sbjct: 836 ESLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPD 895
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KA + KCL+LA LHSMAVDFAKTGA AEMPR L P+E+PDFMER D+ Y S GVLGKLY
Sbjct: 896 KALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLY 955
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
+ + + SD + ++R + AYD DL G+EAF+++A++HK Y++ + +L+NY+G
Sbjct: 956 RGVIKSYIRRNSDDLSTDRAIQDAYDHDLLVEGYEAFIETAKTHKEMYLDSMNSLLNYYG 1015
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A+ E EILTGNLR + +YLQRD ++Y E+KDRILVS K L KEVKGWF G C + ++ K+
Sbjct: 1016 AEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFSGCCTEDDHQKL 1075
Query: 1088 ASAWW*HLA*H 1120
SAW+ H+ H
Sbjct: 1076 VSAWY-HVTYH 1085
Score = 23.1 bits (48), Expect(2) = e-143
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 1101 GDILLNIKSARNRR 1142
GDILLNIKS R+
Sbjct: 1103 GDILLNIKSHNTRK 1116
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 514 bits (1323), Expect(2) = e-143
Identities = 243/371 (65%), Positives = 297/371 (80%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIFVPKGR+LIGC+DE+G+L YGQVY+R+T+ + EL+C DQ+F++KVDE+TS ++G+V V
Sbjct: 709 RIFVPKGRILIGCLDESGILDYGQVYVRITMTKAELQCCDQSFFRKVDESTSTIIGEVAV 768
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGDIRVL+AVY+ EEKGLVDCI+FP+ G RPH NECSGGDLDGD +F WD
Sbjct: 769 TKNPCLHPGDIRVLEAVYDVELEEKGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWD 828
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+ L+P HT+ PMDY+G R RIMDH VTLEEIQ+FFVDYMINDTLG ISTAHLVHAD EP+
Sbjct: 829 EGLLPCHTEAPMDYVGGRQRIMDHNVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPD 888
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KARS KCL+LA LHSMAVDFAKTGAPAEMP L P+E+PDFMER ++ Y S GVLGKLY
Sbjct: 889 KARSEKCLQLATLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLY 948
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
+ + S+ + S++IA+ YD DLE GFE FL A +K Y+EK+ LM+Y+G
Sbjct: 949 RDIHDSTRQERSNFMWSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYG 1008
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A TE+EILTGNLR+RP YLQRD +KYG++KDRILVS+K L+KE K WF SC E+ M
Sbjct: 1009 AKTEDEILTGNLRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSCNPTEHQCM 1068
Query: 1088 ASAWW*HLA*H 1120
ASAW+ H+ H
Sbjct: 1069 ASAWY-HVTYH 1078
Score = 23.1 bits (48), Expect(2) = e-143
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 1101 GDILLNIKSARNR 1139
GDILLNIKS +R
Sbjct: 1096 GDILLNIKSLNSR 1108
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 512 bits (1319), Expect(2) = e-142
Identities = 245/371 (66%), Positives = 298/371 (80%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIFVPKGRVL+GC+DETG L YGQVY+R+T+ + E E DQ+F+QKVDETT VV GKVVV
Sbjct: 715 RIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKVDETTLVVTGKVVV 774
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL AVY+ V EEK +VDC++FP+KGERPH NECSGGDLDGDL+F WD
Sbjct: 775 TKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWD 834
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+L+P HT PMDY RR RIMDH VTLEEIQKFFVDYMIND LG ISTAHLVHAD EP+
Sbjct: 835 KDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPD 894
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KA +PKCL+LA+LHSMAVDFAKTGAPAEM R L PKE+PDFMER D+ Y S G LGKLY
Sbjct: 895 KALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLY 954
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ + ++ +++ + SE+IA+ AYD DLE +G E+ L+ A+ H+ Y+EK+ +MNY+G
Sbjct: 955 RAVVGSVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYG 1014
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A TE+EILTGNLR R YLQRD ++YG+MKDRI +S+K LQKE KG F SC E+ +M
Sbjct: 1015 AVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGLFESSCPVSEHQRM 1074
Query: 1088 ASAWW*HLA*H 1120
ASAW+ H+ H
Sbjct: 1075 ASAWY-HVTYH 1084
Score = 23.1 bits (48), Expect(2) = e-142
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 1101 GDILLNIKSARNRR 1142
GDILLNIK+ N R
Sbjct: 1102 GDILLNIKALNNPR 1115
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 983
Score = 509 bits (1312), Expect(2) = e-142
Identities = 246/371 (66%), Positives = 294/371 (79%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIFVPKGR+LIGC+DET +L YGQVY+R+T+ + EL+ DQA + +VDETT+VV GKV+V
Sbjct: 564 RIFVPKGRILIGCLDETRILDYGQVYVRITMTKAELQDADQASFHRVDETTAVVTGKVIV 623
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGDIRVL+AVYE EEKGLVDCI+FP+KGERPH NECSGGDLDGD +F WD
Sbjct: 624 TKNPCLHPGDIRVLEAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFISWD 683
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
LIP T++PMDY GRR R MDH+VTLEEIQKFF+DYMINDTLG ISTAHLVHADREP+
Sbjct: 684 KGLIPGETESPMDYQGRRPRKMDHDVTLEEIQKFFIDYMINDTLGAISTAHLVHADREPD 743
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KARS KCL+LA LHSMAVDFAKTGAPAEMP+ L PKE+PDFMER D+ Y S GVLGKLY
Sbjct: 744 KARSSKCLQLAELHSMAVDFAKTGAPAEMPKALKPKEFPDFMERIDKKMYISGGVLGKLY 803
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
+ + + S + +E IA+ YD DLE GFE F++ A SHK YVEKL LM+Y+
Sbjct: 804 RGTLDSTRQQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAISHKDMYVEKLSGLMDYYE 863
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A E+EILTGNL+ + +YLQRD ++YG+ KDRIL+SVK LQKE K WF C+ E ++
Sbjct: 864 AKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILISVKSLQKEAKEWFESCCQAKEKQRL 923
Query: 1088 ASAWW*HLA*H 1120
ASAW+ H+ H
Sbjct: 924 ASAWY-HVTYH 933
Score = 23.1 bits (48), Expect(2) = e-142
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 1104 DILLNIKSARNRRNQTET 1157
DILLNIKSA ++ +T +
Sbjct: 952 DILLNIKSANSKNLKTSS 969
>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
polymerase 2 isoform 1 [Theobroma cacao]
gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao] gi|508773407|gb|EOY20663.1|
RNA-dependent RNA polymerase 2 isoform 1 [Theobroma
cacao]
Length = 1149
Score = 508 bits (1308), Expect(2) = e-141
Identities = 241/371 (64%), Positives = 299/371 (80%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RI+VPKG+VL+GC+DET L YGQVY+R+++K+ ELE DQ F+ KVDE T++V+GKVVV
Sbjct: 722 RIYVPKGQVLVGCLDETATLNYGQVYVRLSIKKAELEHADQNFFHKVDEKTAIVIGKVVV 781
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL+AVYE E+KGLVDC+VFP+KGERPH NECSGGDLDGD +F WD
Sbjct: 782 TKNPCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWD 841
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+LIP TD PMDY G R RIMDHEVTLEEIQKFFVDYMINDTLG ISTAHLVHADREP+
Sbjct: 842 KDLIPCQTDAPMDYTGSRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPD 901
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KARS KCL LA LHSMAVDFAKTGAPAEMPR L P+E+PDFM+R D+ Y S GVLGKLY
Sbjct: 902 KARSEKCLELATLHSMAVDFAKTGAPAEMPRSLKPREFPDFMQRVDKPMYASLGVLGKLY 961
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ + + S + S+++A+ YD DLE NGFEAFL +A++HK Y EK+ LMNY+
Sbjct: 962 RATINSTVQERSKFVWSKKMAEALYDHDLEVNGFEAFLSTAQTHKDMYEEKMSFLMNYYE 1021
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
++E+EILTGN+R + +LQRD ++YG+MKDRIL+S+K LQ+E + F SC+ E+ ++
Sbjct: 1022 VESEDEILTGNMRNKATFLQRDNRRYGDMKDRILLSMKNLQREARERFENSCKVGEHQRL 1081
Query: 1088 ASAWW*HLA*H 1120
ASAW+ H+ H
Sbjct: 1082 ASAWY-HVTYH 1091
Score = 23.5 bits (49), Expect(2) = e-141
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 1101 GDILLNIKSARNRRNQTE 1154
GDILL IKS +R Q E
Sbjct: 1110 GDILLKIKSVNSREIQRE 1127
>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
Length = 1122
Score = 507 bits (1305), Expect = e-141
Identities = 245/373 (65%), Positives = 298/373 (79%), Gaps = 2/373 (0%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVD--ETTSVVMGKV 181
RIFVPKGRVLIGC+DETG+L YGQV++R+T+ + + + D+ Q VD ++T +++GKV
Sbjct: 719 RIFVPKGRVLIGCLDETGILNYGQVFVRITVTKTKEKIGDENL-QNVDGDDSTRIIVGKV 777
Query: 182 VVTKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFAC 361
VVTKNPCLHPGDIRVL A+Y EEKGL DC+VFP+KG RPH NECSGGDLDGDL+F
Sbjct: 778 VVTKNPCLHPGDIRVLDAIYNEELEEKGLRDCLVFPQKGPRPHPNECSGGDLDGDLFFIS 837
Query: 362 WDDNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADRE 541
WD +LIP TD PMDY GRR RIMDH+VTLEEI +FFVDYMINDTLG ISTAHLVHADRE
Sbjct: 838 WDKDLIPPQTDNPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADRE 897
Query: 542 PEKARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGK 721
PEKARS KCL LA LHSMAVDFAKTGAPAEMPR L P+E+PDFMER D+ Y S GVLGK
Sbjct: 898 PEKARSRKCLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFMERFDKPMYISNGVLGK 957
Query: 722 LYQSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNY 901
LY++ + + V S+ +LSE+ A+ AYD LE NGFEAFL++A SHK Y +K+ +LM++
Sbjct: 958 LYRALVESTTQVRSNIVLSEKFAEEAYDHQLEVNGFEAFLETASSHKEMYAQKMSSLMSF 1017
Query: 902 FGADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYT 1081
+ A+TE+E+LTGNL+ R YLQRD ++YG+MKDRIL+SVK LQ+E K WF C+ HEY
Sbjct: 1018 YDAETEDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQREAKEWFESDCQPHEYQ 1077
Query: 1082 KMASAWW*HLA*H 1120
MASAW+ H+ H
Sbjct: 1078 LMASAWY-HVTYH 1089
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 506 bits (1302), Expect = e-140
Identities = 238/366 (65%), Positives = 296/366 (80%), Gaps = 1/366 (0%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIFVPKGR+LIGC+DETG L YGQVY+ + +K+ ELEC DQ++++KVDE T++V+GKVVV
Sbjct: 714 RIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRKVDEETAIVIGKVVV 773
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL+AVYEP EEKGLVDC+VFP+KGERPH NECSGGDLDGD +F WD
Sbjct: 774 TKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPEKGERPHPNECSGGDLDGDQFFISWD 833
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+LIP T+ PMDY GRR RIMDHEVTLEEIQKFFVDYMINDTLG ISTAHLVHADREP
Sbjct: 834 KDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPY 893
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KARS CL LA LHSMAVDFAKTGAPAEMPR L P+E+PDFM+R ++ Y S+GVLGKLY
Sbjct: 894 KARSENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLY 953
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ + + + S + ++ +A+ AYD DLE NGFE+ + AE+HK Y E++ LM+Y+
Sbjct: 954 RATINSTVQIRSKFVWTKEMAELAYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYD 1013
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQ-HEYTK 1084
+ E+EILTGN+ + +L RD ++YGEMK+RI++SVK LQ+E K WF SC + E+ K
Sbjct: 1014 VEYEDEILTGNMYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQK 1073
Query: 1085 MASAWW 1102
+ASAW+
Sbjct: 1074 LASAWY 1079
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 501 bits (1291), Expect = e-139
Identities = 236/366 (64%), Positives = 294/366 (80%), Gaps = 1/366 (0%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIFVPKGR+LIGC+DETG L YGQVY+ + +K+ ELEC DQ++++KVDE T++V+GKVVV
Sbjct: 714 RIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRKVDEETAIVIGKVVV 773
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL+AVYEP EEKGLVDC+VFP+KGERPH NECSGGDLDGD +F WD
Sbjct: 774 TKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWD 833
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+LIP T+ PMDY GRR RIMDHEVTLEEIQKFFVDYMINDTLG ISTAHLVHADREP+
Sbjct: 834 KDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPD 893
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KA S CL LA LHSMAVDFAKTGAPAEMPR L P+E+PDFM+R ++ Y S+GVLGKLY
Sbjct: 894 KACSENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLY 953
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ + + S + ++ +A+ YD DLE NGFE+ + AE+HK Y E++ LM+Y+
Sbjct: 954 RATINSTVQTRSKFVWTKEMAELVYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYD 1013
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQ-HEYTK 1084
+ E+EILTGN+ + +L RD ++YGEMK+RI++SVK LQ+E K WF SC + E+ K
Sbjct: 1014 VEYEDEILTGNIYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQK 1073
Query: 1085 MASAWW 1102
+ASAW+
Sbjct: 1074 LASAWY 1079
>ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
gi|561028757|gb|ESW27397.1| hypothetical protein
PHAVU_003G198500g [Phaseolus vulgaris]
Length = 1119
Score = 501 bits (1290), Expect = e-139
Identities = 238/371 (64%), Positives = 294/371 (79%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RIFVPKGRVL+GC+DETG+L YG+V++RVT+KR + D D++T +++GKVVV
Sbjct: 716 RIFVPKGRVLVGCLDETGLLNYGEVFVRVTVKRTTEKFDDNLRKGGDDDSTRIIVGKVVV 775
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGD+RVL A+Y EEKGL DC+VFP+ G RPH NECSGGDLDGDL+F WD
Sbjct: 776 TKNPCLHPGDVRVLDAIYNEELEEKGLRDCLVFPQNGHRPHPNECSGGDLDGDLFFISWD 835
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+LIP T+ PMDY GRR RIMDH+VTLEEIQ FFVDYMINDTLG ISTAHLVHADREP+
Sbjct: 836 KDLIPAQTEAPMDYTGRRPRIMDHKVTLEEIQHFFVDYMINDTLGAISTAHLVHADREPD 895
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KA+S KCL LA LHSMAVDFAKTGAPA MPRVL P+E+PDFMER ++ Y S GVLGKLY
Sbjct: 896 KAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVEKPMYISKGVLGKLY 955
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ + + ++ + SE++A+ AYD LE NGFEAFL++A SHK Y +K+ +LMN++G
Sbjct: 956 RAIIESQMQIKYSFVWSEKLAEEAYDRSLEVNGFEAFLETASSHKEMYAQKMSSLMNFYG 1015
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A+TE+E+L GNL+ R YLQRD ++YG+MKDRIL+SVK LQ+E K WF SC+ HEY M
Sbjct: 1016 AETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKEWFETSCQPHEYRPM 1075
Query: 1088 ASAWW*HLA*H 1120
ASAW+ H+ H
Sbjct: 1076 ASAWY-HVTYH 1085
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp.
vesca]
Length = 1136
Score = 493 bits (1269), Expect(2) = e-138
Identities = 234/365 (64%), Positives = 290/365 (79%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
R++VPKGR+L+GC+DETG L YGQVY+R+T+ + E E Q+F+Q+VDE T +V GKVVV
Sbjct: 717 RMYVPKGRILVGCLDETGTLNYGQVYLRITMTKAEQEMGHQSFFQRVDEATCIVTGKVVV 776
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGDIRVL+AVY+ EEK +VDCI+FP+KGERPH NECSGGDLDGDL+F WD
Sbjct: 777 TKNPCLHPGDIRVLEAVYDVGLEEKNMVDCILFPQKGERPHPNECSGGDLDGDLFFISWD 836
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+LIP T PMDY RR R MDH+VTLEEIQKFFVDYMIND LG ISTAHLVH+D EPE
Sbjct: 837 KSLIPPTTVPPMDYSARRPRNMDHDVTLEEIQKFFVDYMINDNLGAISTAHLVHSDHEPE 896
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KA S KCL LA+LHSMAVDFAKTGAPAE+ +L PKE+PDFMER +R Y S G LGKLY
Sbjct: 897 KAMSKKCLELADLHSMAVDFAKTGAPAELSWILKPKEFPDFMERVERPMYISNGALGKLY 956
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ ++ ++ + S++ A+ AYD +LE GFE+FL+ AESH+ Y+EK+ +LMNY+
Sbjct: 957 RAIRSSVVQEQTIVVWSQQRAEEAYDRELEVQGFESFLEMAESHRDKYIEKMRSLMNYYE 1016
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYTKM 1087
A TE+EILTGNLR R YLQRD ++Y ++KDRIL+S+K LQKE KGWF SC+ E ++
Sbjct: 1017 ATTEDEILTGNLRNRAAYLQRDNRRYFDLKDRILLSLKTLQKEAKGWFESSCKVSEQQRL 1076
Query: 1088 ASAWW 1102
ASAW+
Sbjct: 1077 ASAWY 1081
Score = 28.9 bits (63), Expect(2) = e-138
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 1101 GDILLNIKSARNRRNQTETSHL 1166
GDILLNIKS +RR++ TS L
Sbjct: 1104 GDILLNIKSLNSRRSRIVTSAL 1125
>ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Glycine
max]
Length = 941
Score = 496 bits (1277), Expect = e-138
Identities = 240/373 (64%), Positives = 295/373 (79%), Gaps = 2/373 (0%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVD--ETTSVVMGKV 181
RIFVPKGRVL+GC+DETG+L YGQV++R+T+ + + D+ +KVD + T +++GKV
Sbjct: 537 RIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTREKFGDENL-RKVDGDDNTCIIVGKV 595
Query: 182 VVTKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFAC 361
VVTKNPCLHPGDIRVL A+Y EEKGL DC+VFP+KG RPH NECSGGDLDGDL+F
Sbjct: 596 VVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFIS 655
Query: 362 WDDNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADRE 541
WD +LIP T+ PMDY GRR RIMDH+VTLEEIQ+FFVDYMINDTLG ISTAHLVHADRE
Sbjct: 656 WDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADRE 715
Query: 542 PEKARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGK 721
+KA+S KCL LA LHSMAVDFAKTGAPA MPRVL P+E+PDFMER D+ Y S GVLGK
Sbjct: 716 QDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGK 775
Query: 722 LYQSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNY 901
LY++ + + + + SE+ A+ AYD LE NGFEAFL++A +HK Y EK+ +LM++
Sbjct: 776 LYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDF 835
Query: 902 FGADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYT 1081
+GA+TE+E+L GNL+ R YLQRD ++YG+MKDRIL+SVK LQ+E K WF SCE HEY
Sbjct: 836 YGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKEWFETSCEPHEYK 895
Query: 1082 KMASAWW*HLA*H 1120
MASAW+ H+ H
Sbjct: 896 PMASAWY-HVTYH 907
>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
max]
Length = 1121
Score = 496 bits (1277), Expect = e-138
Identities = 240/373 (64%), Positives = 295/373 (79%), Gaps = 2/373 (0%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVD--ETTSVVMGKV 181
RIFVPKGRVL+GC+DETG+L YGQV++R+T+ + + D+ +KVD + T +++GKV
Sbjct: 717 RIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTREKFGDENL-RKVDGDDNTCIIVGKV 775
Query: 182 VVTKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFAC 361
VVTKNPCLHPGDIRVL A+Y EEKGL DC+VFP+KG RPH NECSGGDLDGDL+F
Sbjct: 776 VVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFIS 835
Query: 362 WDDNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADRE 541
WD +LIP T+ PMDY GRR RIMDH+VTLEEIQ+FFVDYMINDTLG ISTAHLVHADRE
Sbjct: 836 WDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADRE 895
Query: 542 PEKARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGK 721
+KA+S KCL LA LHSMAVDFAKTGAPA MPRVL P+E+PDFMER D+ Y S GVLGK
Sbjct: 896 QDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGK 955
Query: 722 LYQSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNY 901
LY++ + + + + SE+ A+ AYD LE NGFEAFL++A +HK Y EK+ +LM++
Sbjct: 956 LYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDF 1015
Query: 902 FGADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYT 1081
+GA+TE+E+L GNL+ R YLQRD ++YG+MKDRIL+SVK LQ+E K WF SCE HEY
Sbjct: 1016 YGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKEWFETSCEPHEYK 1075
Query: 1082 KMASAWW*HLA*H 1120
MASAW+ H+ H
Sbjct: 1076 PMASAWY-HVTYH 1087
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 494 bits (1271), Expect = e-137
Identities = 242/381 (63%), Positives = 295/381 (77%), Gaps = 1/381 (0%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVDETTSVVMGKVVV 187
RI VPKGR+LIGCMDE G+L YGQVY+RVTL + ELE R+Q ++ K+DE TSVV+GKVVV
Sbjct: 720 RILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELESREQGYFHKIDEETSVVIGKVVV 779
Query: 188 TKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFACWD 367
TKNPCLHPGDIRVL A+YE FE+KG +DCIVFP+KGERPH NECSGGDLDGD +F WD
Sbjct: 780 TKNPCLHPGDIRVLDAIYEISFEQKGFLDCIVFPQKGERPHPNECSGGDLDGDQFFVSWD 839
Query: 368 DNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADREPE 547
+ LIP D PMDY G R RIMDH+VTLEEI KFFVDYMI+DTLG+ISTAHL+HADR+PE
Sbjct: 840 EKLIPSQMDPPMDYAGSRPRIMDHDVTLEEIHKFFVDYMISDTLGVISTAHLIHADRDPE 899
Query: 548 KARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGKLY 727
KARS KCL LANLHS AVDFAKTGAPAEMP L P+E+PDF+ER ++ Y S V GKLY
Sbjct: 900 KARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPMYISESVFGKLY 959
Query: 728 QSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNYFG 907
++ +L + + SE AYDS LE GFE+F+++A++H+ Y EKL +LMNY+G
Sbjct: 960 RAVKRSLAQRKPEEAESE--VTMAYDSTLEEAGFESFIETAKAHRDMYAEKLSSLMNYYG 1017
Query: 908 ADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSC-EQHEYTK 1084
A EEEILTG LR + +YLQRD ++YG+MKDRI +SVK LQ+E GWF SC E+ + K
Sbjct: 1018 AANEEEILTGILRTKEMYLQRDNRRYGDMKDRITLSVKDLQREAMGWFDKSCKEEQQRKK 1077
Query: 1085 MASAWW*HLA*HKVSQKQKKP 1147
+ASAW + + S + +KP
Sbjct: 1078 LASAW--YYVTYNPSHRDEKP 1096
>ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max]
Length = 1120
Score = 491 bits (1265), Expect = e-136
Identities = 238/382 (62%), Positives = 296/382 (77%), Gaps = 2/382 (0%)
Frame = +2
Query: 8 RIFVPKGRVLIGCMDETGMLCYGQVYIRVTLKRPELECRDQAFYQKVD--ETTSVVMGKV 181
RIFVPKGRVL+GC+DETG+L YGQV++R+T+ + D+ +KVD ++T +++GKV
Sbjct: 716 RIFVPKGRVLVGCLDETGLLNYGQVFVRITVAKTRENFGDENL-RKVDGDDSTRIIVGKV 774
Query: 182 VVTKNPCLHPGDIRVLQAVYEPVFEEKGLVDCIVFPKKGERPHTNECSGGDLDGDLYFAC 361
VVTKNPCLHPGDIRVL A+Y EE GL DC+VFP+KG RPH NECSGGDLDGDL+F
Sbjct: 775 VVTKNPCLHPGDIRVLDAIYSKELEENGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFLS 834
Query: 362 WDDNLIPLHTDTPMDYIGRRSRIMDHEVTLEEIQKFFVDYMINDTLGMISTAHLVHADRE 541
WD +LIP T+ PMDY GRR RIMDH+VTLEEIQ+FFVDYMINDTLG ISTAHLVHADRE
Sbjct: 835 WDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADRE 894
Query: 542 PEKARSPKCLRLANLHSMAVDFAKTGAPAEMPRVLNPKEYPDFMEREDRANYKSTGVLGK 721
+KA+S KCL LA LHSMAVDFAKTGAPA MPRVL P+E+PDFMER D+ Y S GVLGK
Sbjct: 895 QDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGK 954
Query: 722 LYQSAMCTLENVESDSILSERIAKPAYDSDLEANGFEAFLDSAESHKMAYVEKLGALMNY 901
LY + + + + + SE+ A+ AYD LE NGFEAFL++A +HK Y EK+ +LM++
Sbjct: 955 LYHAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDF 1014
Query: 902 FGADTEEEILTGNLRYRPIYLQRDRKKYGEMKDRILVSVKCLQKEVKGWFHGSCEQHEYT 1081
+GA+TE+E+L GN++ R YLQRD ++YG+MKDRIL+SVK LQ+E K WF SC+ EY
Sbjct: 1015 YGAETEDEMLLGNVQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKEWFETSCQPREYK 1074
Query: 1082 KMASAWW*HLA*HKVSQKQKKP 1147
MASAW+ H+ H+ Q+ P
Sbjct: 1075 PMASAWY-HVTYHRSHYCQESP 1095