BLASTX nr result
ID: Sinomenium21_contig00018698
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00018698
(583 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 327 2e-87
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 318 5e-85
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 318 7e-85
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 315 4e-84
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 313 2e-83
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 313 3e-83
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th... 312 4e-83
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 310 1e-82
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 305 4e-81
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 302 4e-80
ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 300 2e-79
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 300 2e-79
ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis ... 299 3e-79
ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha... 298 5e-79
ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 298 5e-79
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 298 7e-79
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 298 9e-79
ref|XP_006836643.1| hypothetical protein AMTR_s00088p00026960 [A... 297 2e-78
ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc... 296 3e-78
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 296 4e-78
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 327 bits (837), Expect = 2e-87
Identities = 155/193 (80%), Positives = 175/193 (90%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSNY+++H+A+YASDF+R++FV+EDWSKLP+NAISTSI+ G+F+ P+RT IYHR+LSIL
Sbjct: 386 ETSNYVVKHFAQYASDFIRVTFVEEDWSKLPANAISTSIQRGIFAKPFRTGIYHRILSIL 445
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDG VIG KRFEFLAFSASQLRS+SVWMFASN+ V A IR+WMGCF IRSVSKCAARM
Sbjct: 446 RDGFVIGAKRFEFLAFSASQLRSNSVWMFASNNGVKAEDIRKWMGCFDKIRSVSKCAARM 505
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS QTF VP QDVE IPD+EVTTDGI YCFSDGIG+ISLSFAKQVA KCGLS TP
Sbjct: 506 GQLFSSSLQTFVVPVQDVEIIPDIEVTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHTP 565
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 566 SAFQIRYGGYKGV 578
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 318 bits (816), Expect = 5e-85
Identities = 151/193 (78%), Positives = 174/193 (90%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
E SNY+++++A YASDF+R++FVDEDWSKLP+NAISTSI+ G+F+ P+RT IYHR+LSIL
Sbjct: 392 EKSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSIL 451
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDGIVIG KRFEFLAFSASQLRSSSVWMF+SND V A IREWMGCF IRS+SKCAARM
Sbjct: 452 RDGIVIGEKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAARM 511
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS QT VPAQDVE IPDVE ++DG+ YCFSDGIG+ISLSFA++VAQKCGL +TP
Sbjct: 512 GQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQTP 571
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 572 SAFQIRYGGYKGV 584
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 318 bits (815), Expect = 7e-85
Identities = 153/193 (79%), Positives = 171/193 (88%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
E+SNY+++HYA YASDFVR+SFV+EDWSKLPSNA+S SI+ F+ P+RT IYHR+LSIL
Sbjct: 391 ESSNYVVKHYAAYASDFVRVSFVEEDWSKLPSNALSMSIRKAFFADPFRTEIYHRILSIL 450
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
R+GIVIG KRF+FLAFSASQLRS+SVWMFASND V IREWMGCFK IRSVSKCAARM
Sbjct: 451 REGIVIGAKRFQFLAFSASQLRSNSVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARM 510
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS QT VP QDVE IPD+EVT+DG YCFSDGIG+ISLSFAKQVAQKCGL +TP
Sbjct: 511 GQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQTP 570
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 571 SAFQIRYGGYKGV 583
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca
subsp. vesca]
Length = 1136
Score = 315 bits (808), Expect = 4e-84
Identities = 148/193 (76%), Positives = 173/193 (89%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
E SNY+++++A+YASDF+R++FV+EDW KLP NA+STSI+ G F+ P+RT IY R+LSIL
Sbjct: 394 EKSNYVVKNFAQYASDFMRVTFVEEDWGKLPVNALSTSIEQGFFAKPFRTGIYQRILSIL 453
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDGIVIG KRFEFLAFSASQLRS+SVWMFASND+V A IR+WMGCF IRSVSKCAARM
Sbjct: 454 RDGIVIGDKRFEFLAFSASQLRSNSVWMFASNDSVKAEDIRDWMGCFNKIRSVSKCAARM 513
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS QT TVP +DVE IPD+E TTDG+ YCFSDGIG+ISLSFA+QVAQKCGL++TP
Sbjct: 514 GQLFSSSTQTLTVPQKDVELIPDIETTTDGVSYCFSDGIGKISLSFARQVAQKCGLNDTP 573
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 574 SAFQIRYGGYKGV 586
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA
polymerase, putative [Ricinus communis]
Length = 983
Score = 313 bits (802), Expect = 2e-83
Identities = 147/193 (76%), Positives = 173/193 (89%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
E+SNY+++++A YASDF+R++FV+EDWSKLP+NAIS SI+ G+F+ P+RT IYHR+LSIL
Sbjct: 241 ESSNYVVKNFASYASDFMRVTFVEEDWSKLPANAISMSIQRGIFAKPFRTGIYHRILSIL 300
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDGIVIG K+FEFLAFSASQLRS+SVWMFASND A IREWMGCF I S+SKCAARM
Sbjct: 301 RDGIVIGAKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAARM 360
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS+QTF V QD+E IPD+EVT+DGI YCFSDGIG+ISLSFA+QVAQKCGL+ TP
Sbjct: 361 GQLFSSSKQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRTP 420
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 421 SAFQIRYGGYKGV 433
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 313 bits (801), Expect = 3e-83
Identities = 147/193 (76%), Positives = 174/193 (90%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSNY+++++A+YASDF+R++FV+EDWSKLP+NA+STSI+ G+F+ PYRT IY R+L+IL
Sbjct: 407 ETSNYVVKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFAKPYRTKIYSRILTIL 466
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
+DGIVIG K +EFLAFSASQLR++SVWMFASND V+A +REWMGCF I SVSKCAARM
Sbjct: 467 QDGIVIGDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAARM 526
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS+QT VP QDVE IPDVEVT+DG YCFSDGIG+ISLSFA+QVAQKCGLS TP
Sbjct: 527 GQLFSSSKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTP 586
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 587 SAFQIRYGGYKGV 599
>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
polymerase 2 isoform 1 [Theobroma cacao]
gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
Length = 1149
Score = 312 bits (800), Expect = 4e-83
Identities = 147/193 (76%), Positives = 173/193 (89%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSNY+++++AEYASDF+R+SFV+EDW KL +NAISTS++ G+FS P+RT IYHR+LS+L
Sbjct: 399 ETSNYVVKNFAEYASDFMRVSFVEEDWGKLSANAISTSVQLGIFSKPFRTKIYHRILSVL 458
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
+ GIVIG KRFEFLAFSASQLRS+SVWMFASND V A +REWMGCFK IRSVSKCAARM
Sbjct: 459 QHGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVTAEDVREWMGCFKKIRSVSKCAARM 518
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS T VP QDV+ IPD+EVT+DGI YCFSDGIG+ISL FA++VAQKCGL++TP
Sbjct: 519 GQLFSSSLPTLVVPVQDVKIIPDIEVTSDGINYCFSDGIGKISLPFAREVAQKCGLNDTP 578
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 579 SAFQIRYGGYKGV 591
>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 310 bits (795), Expect = 1e-82
Identities = 148/193 (76%), Positives = 170/193 (88%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSNY+++++A YASDF+R++FV+EDW KL + +STSI+ G+F+ PYRT IY R+LSIL
Sbjct: 389 ETSNYVVKNFAAYASDFLRVTFVEEDWGKLHPHVVSTSIEQGIFAKPYRTGIYDRILSIL 448
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
R+GI+IG KR+EFLAFSASQLRSS+VWMFASND V A IREWMGCF IRSVSKCAARM
Sbjct: 449 RNGILIGAKRYEFLAFSASQLRSSAVWMFASNDNVKAEDIREWMGCFNKIRSVSKCAARM 508
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSSRQT VP QD+E IPDVEVTTDGI YCFSDGIG+IS SFA+QVAQKCGL ETP
Sbjct: 509 GQLFSSSRQTLIVPTQDLEIIPDVEVTTDGIDYCFSDGIGKISSSFARQVAQKCGLKETP 568
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 569 SAFQIRYGGYKGV 581
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 305 bits (782), Expect = 4e-81
Identities = 140/193 (72%), Positives = 171/193 (88%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSNY++++++ YASDF+R++FV+EDWSKLP+ A++TSI+ G+ S PYRT IYHR++++L
Sbjct: 391 ETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVL 450
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDGIVIG KRFEFLAFSASQLRS+SVWMFAS+D + A IR+WMGCF+ IRS+SKCAARM
Sbjct: 451 RDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARM 510
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS QT VP +DVE IPD+EV TDGI YCFSDGIG+ISLSFA+QVA KCG++ P
Sbjct: 511 GQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIP 570
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 571 SAFQIRYGGYKGV 583
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 302 bits (774), Expect = 4e-80
Identities = 141/193 (73%), Positives = 169/193 (87%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ET+NY+++++AE+ASDF+R++FV+EDWSKLP+NA+S + K G F P+RT IYHRVL+IL
Sbjct: 397 ETANYVVKNFAEHASDFMRVTFVEEDWSKLPANALSVNSKEGYFLKPFRTKIYHRVLTIL 456
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
+GI +G KRFEFLAFSASQLR +SVWMFASN+ V A +REWMGCF+ IRS+SKCAARM
Sbjct: 457 GEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAENVREWMGCFRKIRSISKCAARM 516
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFS+SRQT TV QDVE IPD+EVTTDG YCFSDGIG+ISL+FAKQVAQKCGLS P
Sbjct: 517 GQLFSASRQTLTVRPQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHIP 576
Query: 41 SAFQIRYGGYKGV 3
SAFQIR+GGYKGV
Sbjct: 577 SAFQIRFGGYKGV 589
>ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Glycine
max]
Length = 941
Score = 300 bits (768), Expect = 2e-79
Identities = 142/193 (73%), Positives = 170/193 (88%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSN++++H+A +ASDF+R++FV+E+W+KLP+NA+ST ++ GLFS P +T IY R+L+IL
Sbjct: 214 ETSNHVVKHFASHASDFMRITFVEENWNKLPTNAVSTGVQKGLFSKPLKTEIYKRILTIL 273
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDGIVIG KRFEFLAFSASQLRS+SVW+FASND + AA IREWMGCF NIRSVSKCAARM
Sbjct: 274 RDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAARM 333
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS QTF V +QDVE IPDVEV +DG+ YCFSDGIG+IS SFA+QVAQK L TP
Sbjct: 334 GQLFSSSMQTFEVVSQDVEIIPDVEVISDGVSYCFSDGIGKISQSFARQVAQKLKLDHTP 393
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGG+KGV
Sbjct: 394 SAFQIRYGGFKGV 406
>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
max]
Length = 1121
Score = 300 bits (768), Expect = 2e-79
Identities = 142/193 (73%), Positives = 170/193 (88%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSN++++H+A +ASDF+R++FV+E+W+KLP+NA+ST ++ GLFS P +T IY R+L+IL
Sbjct: 394 ETSNHVVKHFASHASDFMRITFVEENWNKLPTNAVSTGVQKGLFSKPLKTEIYKRILTIL 453
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDGIVIG KRFEFLAFSASQLRS+SVW+FASND + AA IREWMGCF NIRSVSKCAARM
Sbjct: 454 RDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAARM 513
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS QTF V +QDVE IPDVEV +DG+ YCFSDGIG+IS SFA+QVAQK L TP
Sbjct: 514 GQLFSSSMQTFEVVSQDVEIIPDVEVISDGVSYCFSDGIGKISQSFARQVAQKLKLDHTP 573
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGG+KGV
Sbjct: 574 SAFQIRYGGFKGV 586
>ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297318388|gb|EFH48810.1| RNA-dependent RNA polymerase
2 [Arabidopsis lyrata subsp. lyrata]
Length = 1134
Score = 299 bits (766), Expect = 3e-79
Identities = 140/193 (72%), Positives = 168/193 (87%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ET+NY+++++AE+ SDF+R++FV+EDWSKLP+NA++ + K G F P+RT IY+RVLSIL
Sbjct: 400 ETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALTVNSKEGYFVKPFRTNIYNRVLSIL 459
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
+GI +G KRFEFLAFSASQLR +SVWMFASN+ + A IREWMGCF+ IRS+SKCAARM
Sbjct: 460 GEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKIKAEDIREWMGCFRKIRSISKCAARM 519
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFS+SRQT V AQDVE IPD+EVTTDG YCFSDGIG+ISL+FAKQVAQKCGLS P
Sbjct: 520 GQLFSASRQTLNVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVP 579
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 580 SAFQIRYGGYKGV 592
>ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
gi|75318859|sp|O82504.1|RDR2_ARATH RecName:
Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2;
AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1;
AltName: Full=RNA-directed RNA polymerase 2
gi|3600048|gb|AAC35535.1| similar to hypothetical
proteins in Schizosaccharomyces pombe (GB:Z98533) and C.
elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana]
gi|4850292|emb|CAB43048.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|7267812|emb|CAB81214.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase
2 [Arabidopsis thaliana]
Length = 1133
Score = 298 bits (764), Expect = 5e-79
Identities = 142/193 (73%), Positives = 167/193 (86%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ET+NY+++++AE+ SDF+R++FV+EDWSKLP+NA+S + K G F P RT IY+RVLSIL
Sbjct: 399 ETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSIL 458
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
+GI +G KRFEFLAFSASQLR +SVWMFASN+ V A IREWMGCF+ IRS+SKCAARM
Sbjct: 459 GEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARM 518
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFS+SRQT V AQDVE IPD+EVTTDG YCFSDGIG+ISL+FAKQVAQKCGLS P
Sbjct: 519 GQLFSASRQTLIVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVP 578
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 579 SAFQIRYGGYKGV 591
>ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max]
Length = 1120
Score = 298 bits (764), Expect = 5e-79
Identities = 139/193 (72%), Positives = 169/193 (87%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSN++++H+A ASDF+R++FV+E+W+KLP+NA+ST ++ G+FS P +T IY R+L+IL
Sbjct: 393 ETSNHVVKHFASLASDFMRITFVEENWNKLPTNAVSTGVQKGIFSKPLKTEIYKRILTIL 452
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDGIVIG KRFEFLAFSASQLRS+SVW+FASND + AA IREWMGCF NIRSVSKCAARM
Sbjct: 453 RDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAARM 512
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS QTF V ++DVE IPD+EVT+DG+ YCFSDGIG+IS FA+QVAQK L TP
Sbjct: 513 GQLFSSSMQTFEVASEDVEMIPDIEVTSDGVSYCFSDGIGKISQCFARQVAQKLNLDHTP 572
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGG+KGV
Sbjct: 573 SAFQIRYGGFKGV 585
>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
Length = 1122
Score = 298 bits (763), Expect = 7e-79
Identities = 145/195 (74%), Positives = 171/195 (87%), Gaps = 2/195 (1%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSN++++H+A YASDF+R++FV+EDWSKLP NA+STS++ G+F+ P+RT IY RVL+IL
Sbjct: 394 ETSNHVVKHFASYASDFMRITFVEEDWSKLPINAVSTSLQKGIFAKPFRTDIYKRVLTIL 453
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDGIVIG KRFEFLAFSASQLRS+SVW+FASND V A IREWMG F NIRSVSKCAARM
Sbjct: 454 RDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDKVKAEDIREWMGSFTNIRSVSKCAARM 513
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGL--SE 48
GQLFSSS+QTF + QDV+ IPD+E+T+DGI YCFSDGIG+ISLSFAKQ+AQK L S
Sbjct: 514 GQLFSSSKQTFEMAPQDVDIIPDIELTSDGINYCFSDGIGKISLSFAKQLAQKLKLDQSR 573
Query: 47 TPSAFQIRYGGYKGV 3
PSAFQIRYGGYKGV
Sbjct: 574 IPSAFQIRYGGYKGV 588
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 298 bits (762), Expect = 9e-79
Identities = 141/193 (73%), Positives = 168/193 (87%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ET+NY+++++AEYASDF+R++FV+EDWSKL +NAIST + G+FS P++T IY R+LSIL
Sbjct: 392 ETANYVVKNFAEYASDFMRVTFVEEDWSKLSANAISTGVHLGVFSRPFKTKIYDRILSIL 451
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
++GIVIG KRF+FLAFSASQLRS+SVWMFASND V A IREWMGCFK IRS+SKCA+RM
Sbjct: 452 QNGIVIGDKRFKFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCASRM 511
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS T VP QDVE I D+EV TDGI YCFSDGIG+ISL FA+QVA+KCGL+ P
Sbjct: 512 GQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHIP 571
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 572 SAFQIRYGGYKGV 584
>ref|XP_006836643.1| hypothetical protein AMTR_s00088p00026960 [Amborella trichopoda]
gi|548839203|gb|ERM99496.1| hypothetical protein
AMTR_s00088p00026960 [Amborella trichopoda]
Length = 1107
Score = 297 bits (760), Expect = 2e-78
Identities = 136/193 (70%), Positives = 169/193 (87%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSNYI++H+A YA DF+R+SFVDEDWSKLPS+A+S ++ G F+ PYRT IY R++S+L
Sbjct: 384 ETSNYIVKHFAAYADDFLRVSFVDEDWSKLPSDALSPKLESGFFAKPYRTNIYKRIVSVL 443
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDGIV+G KRFEFLAFSASQLRS++VWMFASN+ ++ IREWMG FKN+R ++KCAARM
Sbjct: 444 RDGIVLGSKRFEFLAFSASQLRSNAVWMFASNENISVESIREWMGEFKNLRCIAKCAARM 503
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFSSS T +VP +V+ IPD+EVTTDGI+YCFSDGIG+ISL+FA+QVA++CGL + P
Sbjct: 504 GQLFSSSTPTLSVPLHEVQVIPDIEVTTDGIEYCFSDGIGKISLAFARQVARRCGLKQPP 563
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 564 SAFQIRYGGYKGV 576
>ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula]
gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase
[Medicago truncatula]
Length = 1308
Score = 296 bits (758), Expect = 3e-78
Identities = 144/195 (73%), Positives = 170/195 (87%), Gaps = 2/195 (1%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSN++++H+A YASDF+R++FV+EDWSKLP+NAIS ++K G+FS P RT IY RVL+IL
Sbjct: 395 ETSNHVVKHFAAYASDFMRITFVEEDWSKLPNNAISITLKKGMFSRPLRTEIYKRVLNIL 454
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
RDGI+IG KRFEFLAFSASQLRS+SVW+FASND V AA IREWMG F NIRSVSKCAARM
Sbjct: 455 RDGILIGSKRFEFLAFSASQLRSNSVWLFASNDKVKAADIREWMGSFNNIRSVSKCAARM 514
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSET- 45
GQLFSSSRQTF + QDV+ IPD+E+T+DGI YCFSDGIG+IS SFA+Q+A+K L E
Sbjct: 515 GQLFSSSRQTFEMAPQDVDLIPDIEITSDGIDYCFSDGIGKISQSFARQLAEKLKLDENR 574
Query: 44 -PSAFQIRYGGYKGV 3
PSAFQIRYGGYKGV
Sbjct: 575 IPSAFQIRYGGYKGV 589
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 296 bits (757), Expect = 4e-78
Identities = 140/193 (72%), Positives = 168/193 (87%)
Frame = -3
Query: 581 ETSNYIIRHYAEYASDFVRLSFVDEDWSKLPSNAISTSIKHGLFSMPYRTAIYHRVLSIL 402
ETSNYI++++AE+ASDF+R++FV+EDW KL NA+S S++ G+F+ PYRT IYHR+LSIL
Sbjct: 393 ETSNYIVKNFAEHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSIL 452
Query: 401 RDGIVIGGKRFEFLAFSASQLRSSSVWMFASNDTVNAAGIREWMGCFKNIRSVSKCAARM 222
R+GIVIG KRF FLAFSASQLRS+SVWMFASN+ V A IREWMGCF IRS+SKCAARM
Sbjct: 453 REGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARM 512
Query: 221 GQLFSSSRQTFTVPAQDVESIPDVEVTTDGIKYCFSDGIGRISLSFAKQVAQKCGLSETP 42
GQLFS+S QT V Q VE +PD+EVT+DG+ YCFSDGIG+IS +FA+QVAQKCGL+ TP
Sbjct: 513 GQLFSTSVQTMEVQLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHTP 572
Query: 41 SAFQIRYGGYKGV 3
SAFQIRYGGYKGV
Sbjct: 573 SAFQIRYGGYKGV 585