BLASTX nr result

ID: Sinomenium21_contig00018656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00018656
         (441 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like isof...    65   1e-08
ref|XP_007038601.1| F-box family protein, putative isoform 1 [Th...    63   4e-08
gb|AFK42252.1| unknown [Lotus japonicus]                               60   2e-07
ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like isof...    60   3e-07
ref|XP_007152334.1| hypothetical protein PHAVU_004G121200g [Phas...    55   8e-06

>ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like isoform X1 [Glycine max]
           gi|571477721|ref|XP_006587356.1| PREDICTED: F-box
           protein At4g00755-like isoform X2 [Glycine max]
           gi|571477724|ref|XP_006587357.1| PREDICTED: F-box
           protein At4g00755-like isoform X3 [Glycine max]
          Length = 374

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
 Frame = +1

Query: 1   VGRPLSPGFDAEITCPSRNCVLKYCPESGSCMSTRASA--DDPGEPSRLHSLTARLMRRA 174
           +GR +SP FD +I  PS  C LKYCP+    +S+  S+   D   PSRL ++T+ +M+R 
Sbjct: 288 MGRSISPEFDVKIHHPSGKCTLKYCPQIDCYVSSSTSSQRSDSSNPSRLRTITSNIMQRG 347

Query: 175 GWNWERMVVNAWLGNV--PIAVAHD 243
              WE+ +++A LG    P+ V +D
Sbjct: 348 VRRWEQFLLSALLGTATDPVVVDND 372


>ref|XP_007038601.1| F-box family protein, putative isoform 1 [Theobroma cacao]
           gi|590672405|ref|XP_007038602.1| F-box family protein,
           putative isoform 1 [Theobroma cacao]
           gi|590672408|ref|XP_007038603.1| F-box family protein,
           putative isoform 1 [Theobroma cacao]
           gi|508775846|gb|EOY23102.1| F-box family protein,
           putative isoform 1 [Theobroma cacao]
           gi|508775847|gb|EOY23103.1| F-box family protein,
           putative isoform 1 [Theobroma cacao]
           gi|508775848|gb|EOY23104.1| F-box family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 372

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +1

Query: 1   VGRPLSPGFDAEITCPSRNCVLKYCPESGSCMSTRASAD-DPGEPSRLHSLTARLMRRAG 177
           VGRP  P FD +I   +  C LKY PE+ +CM +  S + +    SR  +LTARL++R  
Sbjct: 285 VGRPFLPRFDIDILDATGRCALKYLPETENCMLSSGSPNWENAASSRFRTLTARLIQRGT 344

Query: 178 WNWERMVVNAWLGNV 222
             WE+M++N  LG V
Sbjct: 345 RGWEQMILNTLLGTV 359


>gb|AFK42252.1| unknown [Lotus japonicus]
          Length = 304

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   VGRPLSPGFDAEITCPSRNCVLKYCPESGSCM-STRASADDPGEPSRLHSLTARLMRRAG 177
           VG+PLSP FD +I  PS  C LKY P++  C+ ST +   +   PSRL SL    +RR  
Sbjct: 228 VGQPLSPAFDIKIHHPSGKCTLKYFPQTDWCVPSTSSPTIESNNPSRLRSLMQSGVRR-- 285

Query: 178 WNWERMVVNAWLGNVPIAV 234
             WE++++ A LG+  +AV
Sbjct: 286 --WEQIILGALLGSGSVAV 302


>ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like isoform X1 [Glycine max]
           gi|571529801|ref|XP_006599630.1| PREDICTED: F-box
           protein At4g00755-like isoform X2 [Glycine max]
          Length = 372

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   VGRPLSPGFDAEITCPSRNCVLKYCPESGSCMSTRASA--DDPGEPSRLHSLTARLMRRA 174
           +GR L P FD +I   S  C LKYCP++   MS+  S+   +   PSRL ++T+ +M+R 
Sbjct: 288 MGRLLFPEFDVKIHHWSGKCTLKYCPQTDCYMSSPTSSPRSNSSNPSRLRTITSSIMQRG 347

Query: 175 GWNWERMVVNAWLGNVPIAVAHD 243
              WE+ ++ A LG  P+ V ++
Sbjct: 348 VRRWEQFLLGALLGTGPVVVDNE 370


>ref|XP_007152334.1| hypothetical protein PHAVU_004G121200g [Phaseolus vulgaris]
           gi|561025643|gb|ESW24328.1| hypothetical protein
           PHAVU_004G121200g [Phaseolus vulgaris]
          Length = 368

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   VGRPLSPGFDAEITCPSRNCVLKY-CPESGSCMSTRASADDPGEPSRLHSLTARLMRRAG 177
           +GRPL+P FD ++  PS  C LKY  P +   MS+  S+ +     RL  +T+ +++R  
Sbjct: 288 MGRPLAPAFDVKVHHPSGKCTLKYHPPPTDPHMSSSTSSPESSSAPRLRIITSSIVQRGV 347

Query: 178 WNWERMVVNAWLGNVPIAV 234
             WE++++ A LG+ P  V
Sbjct: 348 RRWEQILLGALLGSGPAVV 366


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