BLASTX nr result

ID: Sinomenium21_contig00018563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00018563
         (314 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314331.2| RelA/SpoT domain-containing family protein [...    61   2e-07

>ref|XP_002314331.2| RelA/SpoT domain-containing family protein [Populus trichocarpa]
           gi|550328797|gb|EEF00502.2| RelA/SpoT domain-containing
           family protein [Populus trichocarpa]
          Length = 568

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = +1

Query: 49  MELRSHGFSVRPISQIRASRSYLLRGKLTTGLGFRP-CRRGDSNKGVRLAVVRLRASANT 225
           ME+      + PI +IR + ++ +       L   P CRR       R   + LRA+A T
Sbjct: 1   MEMELTSLQLLPIQRIRRAPTHEI-----VSLSSPPSCRRRQ-----RRWKISLRATAET 50

Query: 226 PTALEQPGGKMVMELVGAFNELTERMNVL 312
            TALEQ GGKMV+ELVGAFNELTERMNVL
Sbjct: 51  -TALEQAGGKMVVELVGAFNELTERMNVL 78


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