BLASTX nr result

ID: Sinomenium21_contig00018198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00018198
         (1242 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   105   4e-36
ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [A...   155   3e-35
emb|CBI40707.3| unnamed protein product [Vitis vinifera]              115   5e-23
emb|CBI31112.3| unnamed protein product [Vitis vinifera]              113   2e-22
ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula] ...   103   2e-19
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...   103   2e-19
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]    86   7e-15
ref|XP_002535058.1| conserved hypothetical protein [Ricinus comm...    73   3e-10
ref|XP_006826457.1| hypothetical protein AMTR_s00004p00209040 [A...    58   1e-05

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score =  105 bits (261), Expect(2) = 4e-36
 Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 6/79 (7%)
 Frame = +2

Query: 257  FPFRFTECDLGHDGSLRASVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGNQKTGG--YRI 427
            FPFRFTECDLGHDG LRASVGKRSPEYSTRSP FLAAMGSTC+QGKPNGNQK  G    +
Sbjct: 957  FPFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQKREGTTLTL 1016

Query: 428  GQKTIQKAK---AHPASKP 475
            G++  +K +      ASKP
Sbjct: 1017 GRRRSKKRRLTLLKLASKP 1035



 Score = 74.7 bits (182), Expect(2) = 4e-36
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +1

Query: 25   QKDCRLNAPTPPCLALYLKKKERDRYEAWETMQEVYDTTGNLKEWRQN 168
            QKDCR NAPTPPCLALYL  + R  Y AWE ++EV DTTGNLKEWRQ+
Sbjct: 910  QKDCRQNAPTPPCLALYLTLRIRG-YAAWERIKEVSDTTGNLKEWRQS 956



 Score =  103 bits (257), Expect = 2e-19
 Identities = 52/56 (92%), Positives = 53/56 (94%)
 Frame = +3

Query: 975  PARPRGIKRSLPVLTWISGDGIRRPEATSSRGRSLALADRLAVSLATAKRLPSAKE 1142
            PARPRGIKRSLPVLTWISGDG RRPE TSSRGRSLAL DRLAVSLATAKRLPSAK+
Sbjct: 1035 PARPRGIKRSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 1090


>ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [Amborella trichopoda]
           gi|548853889|gb|ERN11849.1| hypothetical protein
           AMTR_s00020p00100020 [Amborella trichopoda]
          Length = 85

 Score =  155 bits (392), Expect = 3e-35
 Identities = 74/84 (88%), Positives = 76/84 (90%)
 Frame = -1

Query: 426 MRYPPVFWFPLGLPCSQVDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTH 247
           MR PPVFWFPLGLPCSQVDP A RKGDLVLYS DL PTEA KLPSCP+SHSVNRKGKPTH
Sbjct: 1   MRCPPVFWFPLGLPCSQVDPNAVRKGDLVLYSDDLLPTEACKLPSCPKSHSVNRKGKPTH 60

Query: 246 PSAPLVDAVRFYEASKHSSLVLIH 175
           PSAPLVDAV FYEASKHSSL LI+
Sbjct: 61  PSAPLVDAVWFYEASKHSSLALIN 84


>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  115 bits (287), Expect = 5e-23
 Identities = 54/59 (91%), Positives = 54/59 (91%)
 Frame = +2

Query: 251 VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGGYRI 427
           VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTGGY I
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGGYHI 573


>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score =  113 bits (282), Expect = 2e-22
 Identities = 54/55 (98%), Positives = 54/55 (98%)
 Frame = +2

Query: 302  LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGGYRIGQKTIQKAKAHPA 466
            LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQK GGYRIGQKTIQKAKAHPA
Sbjct: 1775 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKMGGYRIGQKTIQKAKAHPA 1829


>ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477460|gb|AES58663.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 159

 Score =  103 bits (257), Expect = 2e-19
 Identities = 52/56 (92%), Positives = 53/56 (94%)
 Frame = +3

Query: 975  PARPRGIKRSLPVLTWISGDGIRRPEATSSRGRSLALADRLAVSLATAKRLPSAKE 1142
            PARPRGIKRSLPVLTWISGDG RRPE TSSRGRSLAL DRLAVSLATAKRLPSAK+
Sbjct: 42   PARPRGIKRSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 97


>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
            gi|355477358|gb|AES58561.1| hypothetical protein
            MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score =  103 bits (256), Expect = 2e-19
 Identities = 56/61 (91%), Positives = 56/61 (91%), Gaps = 2/61 (3%)
 Frame = -3

Query: 1141 SFALGKRFAVAKLTASLSARAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAG--AS 968
            SFALGKRFAVAKLTASLS RAKLRPRLLV SGRL PSPEIQVSTGKDLLIPRGRAG  AS
Sbjct: 19   SFALGKRFAVAKLTASLSPRAKLRPRLLVTSGRLFPSPEIQVSTGKDLLIPRGRAGLEAS 78

Query: 967  Y 965
            Y
Sbjct: 79   Y 79



 Score = 87.8 bits (216), Expect = 9e-15
 Identities = 41/48 (85%), Positives = 42/48 (87%)
 Frame = -1

Query: 357 RKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHPSAPLVDAVRF 214
           +KGDLVLYSG  FPTEARK PSCPRSHSVNRKGKPTHPSAPLVD   F
Sbjct: 89  KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGF 136


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 82.0 bits (201), Expect(2) = 7e-15
 Identities = 44/46 (95%), Positives = 44/46 (95%), Gaps = 2/46 (4%)
 Frame = -3

Query: 1084 RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAG--ASYRKLL 953
            RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAG  ASYRKLL
Sbjct: 38   RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYRKLL 83



 Score = 26.6 bits (57), Expect(2) = 7e-15
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -2

Query: 926 IGLEASYLSPIS 891
           IGLEASYLSPIS
Sbjct: 96  IGLEASYLSPIS 107



 Score = 86.3 bits (212), Expect(2) = 7e-15
 Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 11/87 (12%)
 Frame = -1

Query: 402 FPLGLPCSQ-----------VDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGK 256
           +P+GL  S            VDPMAARKGDLVLYSGDLFPTEARKLPSC +      KG+
Sbjct: 94  YPIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLFPTEARKLPSCTQITFRESKGE 153

Query: 255 PTHPSAPLVDAVRFYEASKHSSLVLIH 175
                +    +VRFYEASKHSSL LI+
Sbjct: 154 AYSSISSSRRSVRFYEASKHSSLALIN 180



 Score = 22.3 bits (46), Expect(2) = 7e-15
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 170 EFCRHSLR 147
           EFCRHSLR
Sbjct: 182 EFCRHSLR 189


>ref|XP_002535058.1| conserved hypothetical protein [Ricinus communis]
            gi|223524110|gb|EEF27319.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 65

 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +3

Query: 1044 RPEATSSRGRSLALADRLAVSLATAKRLPSAKERAFAT 1157
            RPEATSSRGRSLALADRLAVSLATAKRLPSAKERAFAT
Sbjct: 28   RPEATSSRGRSLALADRLAVSLATAKRLPSAKERAFAT 65


>ref|XP_006826457.1| hypothetical protein AMTR_s00004p00209040 [Amborella trichopoda]
            gi|548830771|gb|ERM93694.1| hypothetical protein
            AMTR_s00004p00209040 [Amborella trichopoda]
          Length = 172

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = +3

Query: 996  KRSLPVLTWISGDGIRRPEATSSRGRSLALADRLAVSLATAKRLPSAKE 1142
            +R+ P   W+      +PEATSSRG+SLAL DRLAVSLAT KRLPSAKE
Sbjct: 126  RRNFP---WLMRVVEAKPEATSSRGQSLALIDRLAVSLATVKRLPSAKE 171


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