BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00018039
         (1418 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...   364   6e-98
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   333   1e-88
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   323   1e-85
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu...   318   3e-84
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-...   311   3e-82
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   305   2e-80
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr...   305   3e-80
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr...   305   3e-80
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   303   9e-80
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-...   302   3e-79
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...   299   2e-78
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-...   299   2e-78
ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citr...   290   1e-75
ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citr...   290   1e-75
ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [A...   287   9e-75
emb|CAD20832.1| sigma factor [Spinacia oleracea]                      283   2e-73
ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC ...   275   5e-71
ref|XP_006601059.1| PREDICTED: RNA polymerase sigma factor sigC ...   275   5e-71
ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC ...   275   5e-71
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus...   271   4e-70

>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|296081598|emb|CBI20603.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  364 bits (934), Expect = 6e-98
 Identities = 210/419 (50%), Positives = 269/419 (64%), Gaps = 2/419 (0%)
 Frame = +3

Query: 168  MGIGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALH 347
            MG+G  L LKW FPI  P LTNSPS R   SSV+ KEAS++S       S + E+ E+L+
Sbjct: 1    MGMGFRLNLKWDFPISCPTLTNSPS-RLCTSSVQGKEASFDSTRFSFP-SVTSEDCESLY 58

Query: 348  KEPVQANSYSFGALKTMENN-SVDKEEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSR 524
            K+P +  + S GAL+T EN+ S  +  KMK+GK  H  L   V+     I  D   S + 
Sbjct: 59   KDPFKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIVNASQAPIGEDISASVAG 118

Query: 525  AQVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPT 704
             Q +  S++ LL+EN+  +E++ AD++++RLER+I+ Q+G+LGALKLF  CLSRTLK  T
Sbjct: 119  LQASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTST 178

Query: 705  SVRWPIPVTKLPSSCPVDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKISCVS-PIK 881
            S       T+    C  +G  +D L KV V              A  KA  I     P K
Sbjct: 179  SFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSK 238

Query: 882  KINKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGKVVS 1061
             I K                    L+ A+NE+EMS+GVK VANLERIR  LEEE G V S
Sbjct: 239  TIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVAS 298

Query: 1062 FSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQAGNM 1241
             S WAEAAGVD+K LQQ+L FGW CRD LLRST SLV+Y+ARNYRG+G+  ED+LQAGN+
Sbjct: 299  LSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNL 358

Query: 1242 GVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRARRA 1418
            GVLQG+ERFDHT+GY+FSTYVQYWIRKSM  LVA+H++G++IP T+NR I QIQ+AR+A
Sbjct: 359  GVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKA 417


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  333 bits (854), Expect = 1e-88
 Identities = 192/394 (48%), Positives = 251/394 (63%), Gaps = 2/394 (0%)
 Frame = +3

Query: 243  TRPYFSSVRSKEASYESATMPVLFSESPEESEALHKEPVQANSYSFGALKTMENN-SVDK 419
            T PY   ++ KEAS++S       S + E+ E+L+K+P +  + S GAL+T EN+ S  +
Sbjct: 78   TDPY---IQGKEASFDSTRFSFP-SVTSEDCESLYKDPFKPFACSSGALQTFENDYSAME 133

Query: 420  EEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSRAQVNNKSRYGLLMENVRKIEDIIAD 599
              KMK+GK  H  L   V+     I  D   S +  Q +  S++ LL+EN+  +E++ AD
Sbjct: 134  AMKMKIGKCSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFAD 193

Query: 600  TDLMRLEREILAQIGKLGALKLFNACLSRTLKEPTSVRWPIPVTKLPSSCPVDGVKNDGL 779
            ++++RLER+I+ Q+G+LGALKLF  CLSRTLK  TS       T+    C  +G  +D L
Sbjct: 194  SNMVRLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHL 253

Query: 780  KKVTVXXXXXXXXXXXXXXATVKAAKISCVS-PIKKINKISRLAXXXXXXXXXXXXXXGL 956
             KV V              A  KA  I     P K I K                    L
Sbjct: 254  DKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRL 313

Query: 957  VIARNESEMSRGVKDVANLERIRTNLEEESGKVVSFSIWAEAAGVDEKELQQRLHFGWSC 1136
            + A+NE+EMS+GVK VANLERIR  LEEE G V S S WAEAAGVD+K LQQ+L FGW C
Sbjct: 314  MNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYC 373

Query: 1137 RDRLLRSTRSLVMYLARNYRGLGIPLEDLLQAGNMGVLQGSERFDHTRGYQFSTYVQYWI 1316
            RD LLRST SLV+Y+ARNYRG+G+  ED+LQAGN+GVLQG+ERFDHT+GY+FSTYVQYWI
Sbjct: 374  RDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWI 433

Query: 1317 RKSMLKLVAQHSKGIQIPMTVNRVINQIQRARRA 1418
            RKSM  LVA+H++G++IP T+NR I QIQ+AR+A
Sbjct: 434  RKSMSTLVARHARGVKIPFTLNRAIGQIQKARKA 467


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 560

 Score =  323 bits (827), Expect = 1e-85
 Identities = 191/420 (45%), Positives = 260/420 (61%), Gaps = 3/420 (0%)
 Frame = +3

Query: 168  MGIGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALH 347
            MG G  L LK  FP  SP   +  S+ P  S VR +EA+   + +  L S   EE +  H
Sbjct: 1    MGFGFRLNLKLDFPFHSPNSPSRLSSSPSSSFVRGREATSYQSRLSFL-SVISEEGDIAH 59

Query: 348  KEPVQANSYSFGALKTMENNSVDKEE-KMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSR 524
            ++P++  +YS+ A++T+EN     E  K+  GK  H  LN  + D   +++ D   S S 
Sbjct: 60   RDPLKTYAYSY-AVQTVENEHSQGEGFKVNFGKRSHFGLN-IIGDAEVSLKEDIFVSPSS 117

Query: 525  AQVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPT 704
             +    SR+ LL+EN+  +E   AD+D  +LE +IL Q+GKLGALKLFN CL+RTL+   
Sbjct: 118  TK-ERTSRFSLLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLETTN 176

Query: 705  SVRWPIPVTKLPSSCPVDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKISCVSPI-- 878
             +      T++   C ++G   +   KV V              A+ +    S   P+  
Sbjct: 177  VLEVSDVHTEIIGECNINGTSINNQIKVVVHTAKKEERKSRRERASARKGHKSPSLPLPS 236

Query: 879  KKINKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGKVV 1058
            + I   S                  L+IARNE+EM+RG+K +A+LE+IRT LEEE+ +VV
Sbjct: 237  RPIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVV 296

Query: 1059 SFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQAGN 1238
            S S WAEAAG+D K LQQ+L FGW CRD L++STRSLV+Y ARNYRG GI LEDLLQAGN
Sbjct: 297  SLSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGN 356

Query: 1239 MGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRARRA 1418
            +GVL+G+ERFDHTRGY+FSTYVQYWIRKSM K+V++ ++GIQIP T++R I QIQ+AR+A
Sbjct: 357  LGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKA 416


>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
            gi|222854562|gb|EEE92109.1| hypothetical protein
            POPTR_0006s25090g [Populus trichocarpa]
          Length = 559

 Score =  318 bits (816), Expect = 3e-84
 Identities = 183/418 (43%), Positives = 257/418 (61%), Gaps = 1/418 (0%)
 Frame = +3

Query: 168  MGIGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALH 347
            MG+G  L  KW  P++S   TNS S    FS+ R  EAS   A +  L S   EE + L+
Sbjct: 1    MGVGFRLTPKWGSPMQSHSATNSTSMFSSFSA-RGMEASVNQARLSFL-SVVSEEGDILN 58

Query: 348  KEPVQANSYSFGALKTMENNSVDKEE-KMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSR 524
            K   ++ + S  A + +EN+ +  E  KM V K  H  +NN + +   ++E +  TS++R
Sbjct: 59   KHSFKSFACS-SAAQNVENDCLQMERLKMNVDKTSHVSINNMMGNDKVSVEEEISTSHTR 117

Query: 525  AQVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPT 704
             +    SR   L++N+  +E ++AD D ++LER+IL Q+G+LGAL+ FNACLSRTL+   
Sbjct: 118  LRERMTSRISFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSN 177

Query: 705  SVRWPIPVTKLPSSCPVDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKISCVSPIKK 884
             +      T+       DG+  D   K  V              A     K +    +  
Sbjct: 178  VLDLSAVPTENTGESKTDGMLGDLTGKTVVRTGKKEERKFRRERAASDNGKKTTSLSLPS 237

Query: 885  INKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGKVVSF 1064
                + L                 +IARNE++M+RGVK  ++LERIRT LEEE+G+VVS 
Sbjct: 238  KTVQNNLPKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSL 297

Query: 1065 SIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQAGNMG 1244
            S WAEA G+D+K LQQ+L FGW CRD L+++T SLV+Y+ARNYRG+GI +EDL+QAGN+G
Sbjct: 298  SCWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLG 357

Query: 1245 VLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRARRA 1418
            +LQG+ERFD TRGY+FSTYVQYWIRKSMLK+V +H++GIQIP  ++R IN+IQ+AR+A
Sbjct: 358  LLQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQKARKA 415


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
            subsp. vesca]
          Length = 545

 Score =  311 bits (798), Expect = 3e-82
 Identities = 181/418 (43%), Positives = 256/418 (61%), Gaps = 1/418 (0%)
 Frame = +3

Query: 168  MGIGSMLELKWVFPI-KSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEAL 344
            MG+G  L LK  FPI  S   TNSPS  P  SSVR +E S+ SA +  L S   EE E  
Sbjct: 1    MGLGFRLNLKCGFPIHNSHWQTNSPSKLPS-SSVRGREGSFSSAGLSFL-SVISEECETS 58

Query: 345  HKEPVQANSYSFGALKTMENNSVDKEEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSR 524
             K+P++  +    + + +++   + EEKM   +       N +DD   +    A      
Sbjct: 59   SKDPLKVYTCPSASPQLLDDGLSEMEEKMNPRRMSKSGSANMIDDKEYSFMSSAGL---- 114

Query: 525  AQVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPT 704
                  S Y LL++N+  +E+  AD+ + +LE+EIL Q+G+LGALKLF  CLSRTLK  +
Sbjct: 115  ----RTSHYTLLLQNLNVLEETFADSGVSKLEKEILLQLGRLGALKLFEICLSRTLKTSS 170

Query: 705  SVRWPIPVTKLPSSCPVDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKISCVSPIKK 884
             +          S  P + ++    ++  +               +  + K S   P+K+
Sbjct: 171  FLDL--------SDIPTEPIEKHKTERKNIVRSGKKEEQKSRKRTSYDSKKFSGTLPVKQ 222

Query: 885  INKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGKVVSF 1064
            + +  +                 L++A+NE+EMS GVK +A+LER++  LE+E+GKV + 
Sbjct: 223  MREGFKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLKVTLEKETGKVPTL 282

Query: 1065 SIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQAGNMG 1244
              WAEAAGVDEK LQQ+LHFGW C+D L+RSTRSLV+YLARNYRGLG+ L+DLLQAGN+G
Sbjct: 283  RCWAEAAGVDEKVLQQQLHFGWYCQDELVRSTRSLVLYLARNYRGLGVALDDLLQAGNLG 342

Query: 1245 VLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRARRA 1418
            +LQG+ERFD +RGY+FSTYVQYWIRKSM +LVAQH++GI+IP T+++ IN+IQ+AR+A
Sbjct: 343  LLQGAERFDPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKIPNTLSKAINRIQKARKA 400


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
            gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
            C, putative [Theobroma cacao]
          Length = 848

 Score =  305 bits (782), Expect = 2e-80
 Identities = 191/422 (45%), Positives = 246/422 (58%), Gaps = 7/422 (1%)
 Frame = +3

Query: 174  IGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALHKE 353
            +  +L LK V P+ S  L NSPS  P  S V S                         K+
Sbjct: 313  VAQVLNLKGVCPVPSHFLANSPSRLPS-SGVLSL------------------------KD 347

Query: 354  PVQANSYSFGALKTMENNSVDKEE-KMKVGKG--LHKPLNNSVDDVFRTIEGDACTSYSR 524
            P++A + S  A +T+E   ++ EE K+ +GKG   H      +D     I GD  +S + 
Sbjct: 348  PLKAYASS-AAPQTLEKGCLEIEEMKVNIGKGSQAHSHSLTMIDKTHELIGGDKSSSRTS 406

Query: 525  AQVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPT 704
             Q    S Y LLMEN+  +E+  AD+D++ LEREIL Q+G+ GALKLFN CLSRTLK   
Sbjct: 407  PQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRFGALKLFNTCLSRTLKASN 466

Query: 705  SVRW---PIPVTKLPSSCPVDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKISC-VS 872
             +     P        +  VDG K++    + V              A      IS  + 
Sbjct: 467  ILDLSDVPANSGDCNMNLSVDGQKDN----IVVCSRKKKQRKKIRERALENPTIISTQLM 522

Query: 873  PIKKINKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGK 1052
            P   ++   +                 L IARNE+EMS+GVK VANLERIRT LEEE+G+
Sbjct: 523  PSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTLEEETGR 582

Query: 1053 VVSFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQA 1232
              S S WAEAAGV EK LQQ L FGW CRD LLRSTRSLV+Y ARNYRGLGI  EDL+QA
Sbjct: 583  AASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQA 642

Query: 1233 GNMGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRAR 1412
            G++GVLQG+ERFDHTRGY+FSTYVQ+WIRKS+ ++VA+H++GIQ+P T++R I QIQ+AR
Sbjct: 643  GSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQIQKAR 702

Query: 1413 RA 1418
            +A
Sbjct: 703  KA 704


>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
            gi|557553990|gb|ESR64004.1| hypothetical protein
            CICLE_v10007968mg [Citrus clementina]
          Length = 442

 Score =  305 bits (781), Expect = 3e-80
 Identities = 185/422 (43%), Positives = 256/422 (60%), Gaps = 5/422 (1%)
 Frame = +3

Query: 168  MGIGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALH 347
            MG+G  L LKWV P++S   T S S R   +SVR +E S+ SA +  L + S E+S +  
Sbjct: 1    MGMGFRLNLKWVSPVQSHFFTTS-SCRLSSTSVRGREGSFNSARLSFLSTIS-EDSASYF 58

Query: 348  KEPVQANSYSFGALKTMENNSVDKEEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSRA 527
            ++PV+A + SF   +T+EN+  + EE  +                         TS    
Sbjct: 59   QDPVKAYTCSFVNTQTVENDYSETEEIRQKS-----------------------TSCIGQ 95

Query: 528  QVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPTS 707
              +++S + LLMEN+  +E   AD+D +RLEREIL Q+GKLGALKLFN+ LSR +K    
Sbjct: 96   DASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSN- 154

Query: 708  VRWPIPVTKLPSSCPVDGVKNDG----LKKVTVXXXXXXXXXXXXXXATVKAAKISCVS- 872
                  V  L      +   ND     + K+ V               + ++ + S +S 
Sbjct: 155  ------VLDLSDVHTEEQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSL 208

Query: 873  PIKKINKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGK 1052
            P + + +  +                 L+IARNE+EMS+GV+ VANLERI+T LE+ESGK
Sbjct: 209  PSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGK 268

Query: 1053 VVSFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQA 1232
              S + WA+AAGV E+ L+Q L FGW CR+ L++STR LV++LARNYRGLGIP  DLLQA
Sbjct: 269  AASLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQA 328

Query: 1233 GNMGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRAR 1412
            GN+GVLQG+ERFDHTRGY+FSTYVQYWIRKS+ K+VA+H++GI+IP  +NR I++IQ+AR
Sbjct: 329  GNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKAR 388

Query: 1413 RA 1418
            +A
Sbjct: 389  KA 390


>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
            gi|557553989|gb|ESR64003.1| hypothetical protein
            CICLE_v10007968mg [Citrus clementina]
          Length = 534

 Score =  305 bits (781), Expect = 3e-80
 Identities = 185/422 (43%), Positives = 256/422 (60%), Gaps = 5/422 (1%)
 Frame = +3

Query: 168  MGIGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALH 347
            MG+G  L LKWV P++S   T S S R   +SVR +E S+ SA +  L + S E+S +  
Sbjct: 1    MGMGFRLNLKWVSPVQSHFFTTS-SCRLSSTSVRGREGSFNSARLSFLSTIS-EDSASYF 58

Query: 348  KEPVQANSYSFGALKTMENNSVDKEEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSRA 527
            ++PV+A + SF   +T+EN+  + EE  +                         TS    
Sbjct: 59   QDPVKAYTCSFVNTQTVENDYSETEEIRQKS-----------------------TSCIGQ 95

Query: 528  QVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPTS 707
              +++S + LLMEN+  +E   AD+D +RLEREIL Q+GKLGALKLFN+ LSR +K    
Sbjct: 96   DASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSN- 154

Query: 708  VRWPIPVTKLPSSCPVDGVKNDG----LKKVTVXXXXXXXXXXXXXXATVKAAKISCVS- 872
                  V  L      +   ND     + K+ V               + ++ + S +S 
Sbjct: 155  ------VLDLSDVHTEEQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSL 208

Query: 873  PIKKINKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGK 1052
            P + + +  +                 L+IARNE+EMS+GV+ VANLERI+T LE+ESGK
Sbjct: 209  PSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGK 268

Query: 1053 VVSFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQA 1232
              S + WA+AAGV E+ L+Q L FGW CR+ L++STR LV++LARNYRGLGIP  DLLQA
Sbjct: 269  AASLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQA 328

Query: 1233 GNMGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRAR 1412
            GN+GVLQG+ERFDHTRGY+FSTYVQYWIRKS+ K+VA+H++GI+IP  +NR I++IQ+AR
Sbjct: 329  GNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKAR 388

Query: 1413 RA 1418
            +A
Sbjct: 389  KA 390


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum]
          Length = 555

 Score =  303 bits (777), Expect = 9e-80
 Identities = 180/415 (43%), Positives = 243/415 (58%), Gaps = 1/415 (0%)
 Frame = +3

Query: 174  IGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALHKE 353
            +G  L LKW F ++ P  +NS S+ P   S + +EA Y+ A     F     + E  H +
Sbjct: 1    MGFRLHLKWGFSVQPPFSSNS-SSWPSSHSFKGREALYDPARSLKPFITG--DCEPSHSD 57

Query: 354  PVQANSYSFGALKTMENNSVDKEEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSRAQV 533
            P +  +          + SV  E K + G+G    +   +      I  D     +    
Sbjct: 58   PFRVQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDG-EKPTYLNT 116

Query: 534  NNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPTSVR 713
                 + LLM+N+  +E++ AD+++ RLER+IL Q+ KLGAL+ F+ CLSRT    T  +
Sbjct: 117  TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFPK 176

Query: 714  WPIPVTKLPSSCPVDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKISCVSP-IKKIN 890
                  +L      D +  + + KV V              A+  A  I  V P  K I 
Sbjct: 177  VLDVPRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQ 236

Query: 891  KISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGKVVSFSI 1070
            +  +                   IA+NE+EMSRGVK VA LERIR+ LEEE+G+V +FS 
Sbjct: 237  EDLQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSS 296

Query: 1071 WAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQAGNMGVL 1250
            WAEAAG+++KELQQRLHFGW CRD LL+STRSLV+YLARNYRGLG+  EDL+QAGNMGVL
Sbjct: 297  WAEAAGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVL 356

Query: 1251 QGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRARR 1415
            QG+ RFDHTRGY+FSTYVQYWIRKS+ KLVAQH++G++IP T+ +VINQI +AR+
Sbjct: 357  QGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARK 411


>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
          Length = 534

 Score =  302 bits (773), Expect = 3e-79
 Identities = 181/418 (43%), Positives = 256/418 (61%), Gaps = 1/418 (0%)
 Frame = +3

Query: 168  MGIGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALH 347
            MG+G  L LKWV P++S   T S S R   +SVR +E S+ SA +  L + S E+S +  
Sbjct: 1    MGMGFRLNLKWVSPVQSHFFTTS-SCRLSSTSVRGREGSFNSARLSFLSTIS-EDSASYF 58

Query: 348  KEPVQANSYSFGALKTMENNSVDKEEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSRA 527
            ++PV+A + SF   +T+EN+  + EE  +                         TS    
Sbjct: 59   QDPVKAYTCSFVNTQTVENDYSETEEIRQKS-----------------------TSCIGQ 95

Query: 528  QVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPTS 707
              +++S + LLMEN+  +E   AD+D +RLEREIL Q+GKLGALKLFN+ LSR +K    
Sbjct: 96   DASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSNV 155

Query: 708  VRWPIPVTKLPSSCPVDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKISCVS-PIKK 884
            +      T+      +D  ++  + K+ V               + ++ +   +S P + 
Sbjct: 156  LDLSDVHTEEQK---MDDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETYLLSLPSEA 212

Query: 885  INKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGKVVSF 1064
            + +  +                 L+IARNE+EMS+GV+ VANLERI+T LE+ESGK    
Sbjct: 213  LQEGLKQPTIFSAERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAARL 272

Query: 1065 SIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQAGNMG 1244
            + WA+AAGV E+ L+Q L FGW CR+ L++STR LV++LARNYRGLGIP  DLLQAGN+G
Sbjct: 273  NCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVG 332

Query: 1245 VLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRARRA 1418
            VLQG+ERFDHTRGY+FSTYVQYWIRKS+ K+VA+H++GI+IP  +NR I++IQ+AR+A
Sbjct: 333  VLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKA 390


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
            gi|462419859|gb|EMJ24122.1| hypothetical protein
            PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  299 bits (766), Expect = 2e-78
 Identities = 177/426 (41%), Positives = 263/426 (61%), Gaps = 9/426 (2%)
 Frame = +3

Query: 168  MGIGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALH 347
            MG+G  L LK  FP+ S     +  ++   +SVR +E S+ SA +  L S   EE EA  
Sbjct: 1    MGLGFRLNLKCGFPVHSSHWQTTSPSKISSTSVRGREGSFNSARLSFL-SVISEEGEASS 59

Query: 348  KEPVQANSYSFGALKTMENNSVDKEEKMKVGKGLHKPLNNS----VDDVFRTIEG-DACT 512
            K+P++  ++   + + +E+   + EE     + + K  +++     +  F + +G +ACT
Sbjct: 60   KDPLKVYTFPSASPQILEDGVSELEEVKTAFRRVPKSFSDNQMPVAEGKFISSKGLEACT 119

Query: 513  SYSRAQVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTL 692
            +         S + LL++N+  +E+  A +D+++LE+EIL Q+ +LGALKLF+ CLSRTL
Sbjct: 120  A---------SHFSLLLQNLNVLEETFATSDVLKLEKEILLQLARLGALKLFDICLSRTL 170

Query: 693  KEPTSVRWPIPVTKLPSSCPVDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKISCVS 872
            K  +     + ++ +P+  PV+  K +  +   V              +  + +  + VS
Sbjct: 171  KTSSF----LDLSDIPT-VPVEEGKMERKEDNNVGEIIVRSGKKEERRSRKRTSDNAIVS 225

Query: 873  ----PIKKINKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEE 1040
                P K I K  +                 L I++NE+EMS GVK +A+LERI+  LE+
Sbjct: 226  SNSLPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEK 285

Query: 1041 ESGKVVSFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLED 1220
            E+GKV +   WAEAAGV EK L Q L FGW C+D L+RSTRSLV+YLARNYRGLG+ L+D
Sbjct: 286  ETGKVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDD 345

Query: 1221 LLQAGNMGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQI 1400
            L+QAGN+G+LQG+ERFDH+RGY+FSTYVQYWIRKSM +LVAQH++G+QIP T+++ INQI
Sbjct: 346  LMQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQI 405

Query: 1401 QRARRA 1418
            Q+AR+A
Sbjct: 406  QKARKA 411


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
            lycopersicum]
          Length = 551

 Score =  299 bits (766), Expect = 2e-78
 Identities = 179/415 (43%), Positives = 246/415 (59%), Gaps = 1/415 (0%)
 Frame = +3

Query: 174  IGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALHKE 353
            +G  L LKW F ++ P  +NS S+ P   S + +E  Y+ A     F     + E  H +
Sbjct: 1    MGFRLHLKWGFSLQPPFSSNS-SSWPSSHSFKGRETLYDPARSLKPFING--DCEPSHSD 57

Query: 354  PVQANSYSFGALKTMENNSVDKEEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSRAQV 533
            P +  +          + SV  E K + G+G   P N   D     I+G+  T  +  + 
Sbjct: 58   PFRVQTCLSDPQLWTSDASVTTETKTRNGRG--SPSNVYGDIGSYKIDGEKPTYLNTTK- 114

Query: 534  NNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPTSVR 713
                 + LLM+N+  +E++ AD+++ RLER+IL Q+ KLGAL+ F+ CLSRT    +  +
Sbjct: 115  --SLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSSFPK 172

Query: 714  WPIPVTKLPSSCPVDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKISCVSP-IKKIN 890
                  +L      D +  + + KV V              A+  A  I  V P  K I 
Sbjct: 173  VLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQ 232

Query: 891  KISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGKVVSFSI 1070
            +  +                   IA+NE+EMS+GVK VA LERIR+ LEEE+G+V +FS 
Sbjct: 233  EDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSS 292

Query: 1071 WAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQAGNMGVL 1250
            WA+AAG+++KELQQ LHFGW CRD LL+STRSLV+YLARNYRGLG+  EDL+QAGNMGVL
Sbjct: 293  WAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVL 352

Query: 1251 QGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRARR 1415
            QG+ RFDHTRGY+FSTYVQYWIRKS+ KLVAQH++G++IP T+ +VINQI +AR+
Sbjct: 353  QGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARK 407


>ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
            gi|567917506|ref|XP_006450759.1| hypothetical protein
            CICLE_v10007968mg [Citrus clementina]
            gi|557553984|gb|ESR63998.1| hypothetical protein
            CICLE_v10007968mg [Citrus clementina]
            gi|557553985|gb|ESR63999.1| hypothetical protein
            CICLE_v10007968mg [Citrus clementina]
          Length = 383

 Score =  290 bits (742), Expect = 1e-75
 Identities = 177/407 (43%), Positives = 244/407 (59%), Gaps = 5/407 (1%)
 Frame = +3

Query: 168  MGIGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALH 347
            MG+G  L LKWV P++S   T S S R   +SVR +E S+ SA +  L + S E+S +  
Sbjct: 1    MGMGFRLNLKWVSPVQSHFFTTS-SCRLSSTSVRGREGSFNSARLSFLSTIS-EDSASYF 58

Query: 348  KEPVQANSYSFGALKTMENNSVDKEEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSRA 527
            ++PV+A + SF   +T+EN+  + EE  +                         TS    
Sbjct: 59   QDPVKAYTCSFVNTQTVENDYSETEEIRQKS-----------------------TSCIGQ 95

Query: 528  QVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPTS 707
              +++S + LLMEN+  +E   AD+D +RLEREIL Q+GKLGALKLFN+ LSR +K    
Sbjct: 96   DASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSN- 154

Query: 708  VRWPIPVTKLPSSCPVDGVKNDG----LKKVTVXXXXXXXXXXXXXXATVKAAKISCVS- 872
                  V  L      +   ND     + K+ V               + ++ + S +S 
Sbjct: 155  ------VLDLSDVHTEEQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSL 208

Query: 873  PIKKINKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGK 1052
            P + + +  +                 L+IARNE+EMS+GV+ VANLERI+T LE+ESGK
Sbjct: 209  PSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGK 268

Query: 1053 VVSFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQA 1232
              S + WA+AAGV E+ L+Q L FGW CR+ L++STR LV++LARNYRGLGIP  DLLQA
Sbjct: 269  AASLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQA 328

Query: 1233 GNMGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPM 1373
            GN+GVLQG+ERFDHTRGY+FSTYVQYWIRKS+ K+VA+H++GI+IP+
Sbjct: 329  GNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPV 375


>ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
            gi|567917512|ref|XP_006450762.1| hypothetical protein
            CICLE_v10007968mg [Citrus clementina]
            gi|557553983|gb|ESR63997.1| hypothetical protein
            CICLE_v10007968mg [Citrus clementina]
            gi|557553988|gb|ESR64002.1| hypothetical protein
            CICLE_v10007968mg [Citrus clementina]
          Length = 381

 Score =  290 bits (742), Expect = 1e-75
 Identities = 177/407 (43%), Positives = 244/407 (59%), Gaps = 5/407 (1%)
 Frame = +3

Query: 168  MGIGSMLELKWVFPIKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEALH 347
            MG+G  L LKWV P++S   T S S R   +SVR +E S+ SA +  L + S E+S +  
Sbjct: 1    MGMGFRLNLKWVSPVQSHFFTTS-SCRLSSTSVRGREGSFNSARLSFLSTIS-EDSASYF 58

Query: 348  KEPVQANSYSFGALKTMENNSVDKEEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYSRA 527
            ++PV+A + SF   +T+EN+  + EE  +                         TS    
Sbjct: 59   QDPVKAYTCSFVNTQTVENDYSETEEIRQKS-----------------------TSCIGQ 95

Query: 528  QVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPTS 707
              +++S + LLMEN+  +E   AD+D +RLEREIL Q+GKLGALKLFN+ LSR +K    
Sbjct: 96   DASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSN- 154

Query: 708  VRWPIPVTKLPSSCPVDGVKNDG----LKKVTVXXXXXXXXXXXXXXATVKAAKISCVS- 872
                  V  L      +   ND     + K+ V               + ++ + S +S 
Sbjct: 155  ------VLDLSDVHTEEQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSL 208

Query: 873  PIKKINKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESGK 1052
            P + + +  +                 L+IARNE+EMS+GV+ VANLERI+T LE+ESGK
Sbjct: 209  PSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGK 268

Query: 1053 VVSFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQA 1232
              S + WA+AAGV E+ L+Q L FGW CR+ L++STR LV++LARNYRGLGIP  DLLQA
Sbjct: 269  AASLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQA 328

Query: 1233 GNMGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPM 1373
            GN+GVLQG+ERFDHTRGY+FSTYVQYWIRKS+ K+VA+H++GI+IP+
Sbjct: 329  GNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPV 375


>ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [Amborella trichopoda]
            gi|548857444|gb|ERN15250.1| hypothetical protein
            AMTR_s00056p00209700 [Amborella trichopoda]
          Length = 529

 Score =  287 bits (734), Expect = 9e-75
 Identities = 182/392 (46%), Positives = 235/392 (59%), Gaps = 6/392 (1%)
 Frame = +3

Query: 261  SVRSKEASYESATMPVLFSESPEESEALHKEPVQANSYSFGALKTMENNSVDKEEKMKVG 440
            +V+SK+ S ESA    L S  PEE+E L  +  +   Y FG ++   N+S D  E+MK+ 
Sbjct: 6    AVKSKQPSIESAKASTL-SVIPEETERLLGDCTKDFPYFFGDIQNA-NSSHDITEEMKMN 63

Query: 441  KGLHKPLNNS--VDDVFRTIEGDACTSYSRAQVNNKSRYGLLMENVRKIEDIIADTDLMR 614
               +KP  +   +D     I  D  ++     V     +  L EN+ KIE II D+   R
Sbjct: 64   INKNKPDASLYVIDKAELPIAEDTFSN-----VAGLPHFSFLFENLEKIEGIIVDSGNAR 118

Query: 615  LEREILAQIGKLGALKLFNACLSRTLKEPTSV----RWPIPVTKLPSSCPVDGVKNDGLK 782
            LEREIL  I +LGALKLF+A LSRTLK+P  +      P      P     DG      K
Sbjct: 119  LEREILLHIERLGALKLFHAFLSRTLKDPKILDVTGTCPEHAMVQPMDEQADGYIVSSGK 178

Query: 783  KVTVXXXXXXXXXXXXXXATVKAAKISCVSPIKKINKISRLAXXXXXXXXXXXXXXGLVI 962
            KV                 T +    S +  +KK  K    A               L  
Sbjct: 179  KVE----RKAQRERALKKVTDEPIVCSSLKRVKKSTKSINAALTHKGHPGNSKSRSHLR- 233

Query: 963  ARNESEMSRGVKDVANLERIRTNLEEESGKVVSFSIWAEAAGVDEKELQQRLHFGWSCRD 1142
            A++E EMSRGV++VA LE+IR NLEE  G+  SFS+WAEAAG++EK L+Q+LHFGW CRD
Sbjct: 234  AQSEVEMSRGVQEVAKLEKIRANLEENLGRDASFSVWAEAAGINEKVLKQQLHFGWFCRD 293

Query: 1143 RLLRSTRSLVMYLARNYRGLGIPLEDLLQAGNMGVLQGSERFDHTRGYQFSTYVQYWIRK 1322
            +LLRSTR LVMYLA++YRG GI  EDLLQAG++GVLQG+ERFDHTRGY+FSTYVQYWIRK
Sbjct: 294  KLLRSTRPLVMYLAKSYRGRGIGFEDLLQAGSLGVLQGAERFDHTRGYRFSTYVQYWIRK 353

Query: 1323 SMLKLVAQHSKGIQIPMTVNRVINQIQRARRA 1418
            S+  LVA+HS+G+QIPM +N+V+NQ  +A+RA
Sbjct: 354  SLSALVARHSRGVQIPMALNKVLNQTVKAKRA 385


>emb|CAD20832.1| sigma factor [Spinacia oleracea]
          Length = 548

 Score =  283 bits (723), Expect = 2e-73
 Identities = 168/422 (39%), Positives = 248/422 (58%), Gaps = 6/422 (1%)
 Frame = +3

Query: 168  MGIGSMLEL-KWVFP-IKSPLLTNSPSTRPYFSSVRSKEASYESATMPVLFSESPEESEA 341
            MG G  L + + V P ++SP  TNS  + P  +S R KE  + SA + +L +   +ESE 
Sbjct: 1    MGFGCKLNMMRCVLPSLRSPFTTNS--SPPCSTSFRGKELDFGSARLSLL-TIGFDESET 57

Query: 342  LHKEPVQANSYSFGALKTMENNSVDKEEKMKVGKGLHKPLNNSVDDVFRTIEGDACTSYS 521
            L K+ ++ ++ S     T+EN+  + E  +       +   + + D     + D      
Sbjct: 58   LRKDTLRPHAGSSSVPLTVENDYSNLETTIS-----KRSCKDLISDTEVLSDRDVSVYVR 112

Query: 522  RAQVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEP 701
              Q  + S +  LM N+  +E+ ++D++L++LE++IL Q+G+LGAL+LF+ACLSR     
Sbjct: 113  SVQSCSASHFHTLMANINLLENKVSDSELLKLEKDILVQLGRLGALQLFHACLSRI---- 168

Query: 702  TSVRWPIPVTKLPSSCPVDGV----KNDGLKKVTVXXXXXXXXXXXXXXATVKAAKISCV 869
                  I ++ LP     DG     K++ LKK  V                  +    C 
Sbjct: 169  ------IDMSDLPGLITEDGKANVRKDNELKKKLVFSKRKEERKLRQERRLQASTSKRCA 222

Query: 870  SPIKKINKISRLAXXXXXXXXXXXXXXGLVIARNESEMSRGVKDVANLERIRTNLEEESG 1049
               +   + S                   +IA+NE+EMSRG+K VA LE+++  LE+E+G
Sbjct: 223  CKSESSIESSIHHVVSTAAKKTKARGRRAIIAKNEAEMSRGIKVVAQLEKVKLTLEKETG 282

Query: 1050 KVVSFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQ 1229
            K VS + WAEAAG+DEK LQ  LHFGW CRD LL+S RSLV+YL+R YRGLG+  EDL+Q
Sbjct: 283  KAVSLNCWAEAAGIDEKVLQHDLHFGWYCRDELLKSGRSLVLYLSRYYRGLGVAHEDLMQ 342

Query: 1230 AGNMGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRA 1409
            AGN+G+LQG+ERFDHTRGYQFSTYVQYWIRK+M +LV++H +GI++P T++  IN++Q+A
Sbjct: 343  AGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVSRHGRGIKVPTTLSTTINRVQKA 402

Query: 1410 RR 1415
            R+
Sbjct: 403  RK 404


>ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC isoform X3 [Glycine max]
          Length = 459

 Score =  275 bits (702), Expect = 5e-71
 Identities = 179/427 (41%), Positives = 255/427 (59%), Gaps = 11/427 (2%)
 Frame = +3

Query: 171  GIGSMLELKWVFPIKSP-LLTNSP-STRPYFSSVRSKEASYESATMPVLFSESPEESEAL 344
            G G    L++   + +P   TNSP    P  + VR    ++   + P  F E   E EAL
Sbjct: 6    GFGLNPRLRYCLLLHTPHSFTNSPLCLSPSSAGVRETCFNFTRLSFPSTFYE---EGEAL 62

Query: 345  HKEPVQANSYSFGALKTMENNSVDKEEKMKVGKG------LHKPLNNSVDDVFRTIEGDA 506
             K+  +  ++S  AL+T+EN+S+ +EE  +V KG      +HK ++N+     +   G+ 
Sbjct: 63   QKDFGRVFAFSSSALETLENDSLGREET-QVNKGKRSLSSVHKMIDNT-----QMPFGEV 116

Query: 507  CTSYSRAQVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSR 686
             T   + +      + LLMEN+  +E+   D++ +RLE+ I+ Q+GKLGAL+LFN CLSR
Sbjct: 117  STVSKKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAIILQLGKLGALELFNVCLSR 176

Query: 687  TLKEPTSVRWPIPVTKLPSSCP--VDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKI 860
            +L            T L S+    VD  K+    KV V                V  A +
Sbjct: 177  SLG-----------TSLVSNYADKVDDYKD----KVVVQSSKKKENKTRRKREFVSTA-V 220

Query: 861  SCVSPIKKINKISRLAXXXXXXXXXXXXXXG-LVIARNESEMSRGVKDVANLERIRTNLE 1037
            S  S   K N+   L                 +++A+ E+EMS+GVK +A LE+IRT +E
Sbjct: 221  SSQSLTLKANQEDLLGFSASLVKRAPNTKNKRILVAKREAEMSKGVKVLAELEKIRTAIE 280

Query: 1038 EESGKVVSFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLE 1217
            E++ +V S S WAEA+GVDEK LQ+ LH G+ C+D L+RSTRSLV+YLAR YRG+GI L+
Sbjct: 281  EDTKRVASLSTWAEASGVDEKVLQKLLHRGYYCQDELIRSTRSLVLYLARKYRGMGIALD 340

Query: 1218 DLLQAGNMGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQ 1397
            DLLQAG +GVLQG+ERFD TRGY+FSTYVQYWIRKS+L++VA++++GI IP ++NR INQ
Sbjct: 341  DLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWIRKSILRVVARYARGIVIPWSLNRAINQ 400

Query: 1398 IQRARRA 1418
            IQ+AR+A
Sbjct: 401  IQKARKA 407


>ref|XP_006601059.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Glycine max]
          Length = 476

 Score =  275 bits (702), Expect = 5e-71
 Identities = 179/427 (41%), Positives = 255/427 (59%), Gaps = 11/427 (2%)
 Frame = +3

Query: 171  GIGSMLELKWVFPIKSP-LLTNSP-STRPYFSSVRSKEASYESATMPVLFSESPEESEAL 344
            G G    L++   + +P   TNSP    P  + VR    ++   + P  F E   E EAL
Sbjct: 6    GFGLNPRLRYCLLLHTPHSFTNSPLCLSPSSAGVRETCFNFTRLSFPSTFYE---EGEAL 62

Query: 345  HKEPVQANSYSFGALKTMENNSVDKEEKMKVGKG------LHKPLNNSVDDVFRTIEGDA 506
             K+  +  ++S  AL+T+EN+S+ +EE  +V KG      +HK ++N+     +   G+ 
Sbjct: 63   QKDFGRVFAFSSSALETLENDSLGREET-QVNKGKRSLSSVHKMIDNT-----QMPFGEV 116

Query: 507  CTSYSRAQVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSR 686
             T   + +      + LLMEN+  +E+   D++ +RLE+ I+ Q+GKLGAL+LFN CLSR
Sbjct: 117  STVSKKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAIILQLGKLGALELFNVCLSR 176

Query: 687  TLKEPTSVRWPIPVTKLPSSCP--VDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKI 860
            +L            T L S+    VD  K+    KV V                V  A +
Sbjct: 177  SLG-----------TSLVSNYADKVDDYKD----KVVVQSSKKKENKTRRKREFVSTA-V 220

Query: 861  SCVSPIKKINKISRLAXXXXXXXXXXXXXXG-LVIARNESEMSRGVKDVANLERIRTNLE 1037
            S  S   K N+   L                 +++A+ E+EMS+GVK +A LE+IRT +E
Sbjct: 221  SSQSLTLKANQEDLLGFSASLVKRAPNTKNKRILVAKREAEMSKGVKVLAELEKIRTAIE 280

Query: 1038 EESGKVVSFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLE 1217
            E++ +V S S WAEA+GVDEK LQ+ LH G+ C+D L+RSTRSLV+YLAR YRG+GI L+
Sbjct: 281  EDTKRVASLSTWAEASGVDEKVLQKLLHRGYYCQDELIRSTRSLVLYLARKYRGMGIALD 340

Query: 1218 DLLQAGNMGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQ 1397
            DLLQAG +GVLQG+ERFD TRGY+FSTYVQYWIRKS+L++VA++++GI IP ++NR INQ
Sbjct: 341  DLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWIRKSILRVVARYARGIVIPWSLNRAINQ 400

Query: 1398 IQRARRA 1418
            IQ+AR+A
Sbjct: 401  IQKARKA 407


>ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Glycine max]
          Length = 551

 Score =  275 bits (702), Expect = 5e-71
 Identities = 179/427 (41%), Positives = 255/427 (59%), Gaps = 11/427 (2%)
 Frame = +3

Query: 171  GIGSMLELKWVFPIKSP-LLTNSP-STRPYFSSVRSKEASYESATMPVLFSESPEESEAL 344
            G G    L++   + +P   TNSP    P  + VR    ++   + P  F E   E EAL
Sbjct: 6    GFGLNPRLRYCLLLHTPHSFTNSPLCLSPSSAGVRETCFNFTRLSFPSTFYE---EGEAL 62

Query: 345  HKEPVQANSYSFGALKTMENNSVDKEEKMKVGKG------LHKPLNNSVDDVFRTIEGDA 506
             K+  +  ++S  AL+T+EN+S+ +EE  +V KG      +HK ++N+     +   G+ 
Sbjct: 63   QKDFGRVFAFSSSALETLENDSLGREET-QVNKGKRSLSSVHKMIDNT-----QMPFGEV 116

Query: 507  CTSYSRAQVNNKSRYGLLMENVRKIEDIIADTDLMRLEREILAQIGKLGALKLFNACLSR 686
             T   + +      + LLMEN+  +E+   D++ +RLE+ I+ Q+GKLGAL+LFN CLSR
Sbjct: 117  STVSKKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAIILQLGKLGALELFNVCLSR 176

Query: 687  TLKEPTSVRWPIPVTKLPSSCP--VDGVKNDGLKKVTVXXXXXXXXXXXXXXATVKAAKI 860
            +L            T L S+    VD  K+    KV V                V  A +
Sbjct: 177  SLG-----------TSLVSNYADKVDDYKD----KVVVQSSKKKENKTRRKREFVSTA-V 220

Query: 861  SCVSPIKKINKISRLAXXXXXXXXXXXXXXG-LVIARNESEMSRGVKDVANLERIRTNLE 1037
            S  S   K N+   L                 +++A+ E+EMS+GVK +A LE+IRT +E
Sbjct: 221  SSQSLTLKANQEDLLGFSASLVKRAPNTKNKRILVAKREAEMSKGVKVLAELEKIRTAIE 280

Query: 1038 EESGKVVSFSIWAEAAGVDEKELQQRLHFGWSCRDRLLRSTRSLVMYLARNYRGLGIPLE 1217
            E++ +V S S WAEA+GVDEK LQ+ LH G+ C+D L+RSTRSLV+YLAR YRG+GI L+
Sbjct: 281  EDTKRVASLSTWAEASGVDEKVLQKLLHRGYYCQDELIRSTRSLVLYLARKYRGMGIALD 340

Query: 1218 DLLQAGNMGVLQGSERFDHTRGYQFSTYVQYWIRKSMLKLVAQHSKGIQIPMTVNRVINQ 1397
            DLLQAG +GVLQG+ERFD TRGY+FSTYVQYWIRKS+L++VA++++GI IP ++NR INQ
Sbjct: 341  DLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWIRKSILRVVARYARGIVIPWSLNRAINQ 400

Query: 1398 IQRARRA 1418
            IQ+AR+A
Sbjct: 401  IQKARKA 407


>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus guttatus]
          Length = 478

 Score =  271 bits (694), Expect = 4e-70
 Identities = 151/337 (44%), Positives = 210/337 (62%), Gaps = 1/337 (0%)
 Frame = +3

Query: 411  VDKEEKMKVGKGLHKPLNNSVD-DVFRTIEGDACTSYSRAQVNNKSRYGLLMENVRKIED 587
            V K  ++ +GKG    L + +D D+      D   + +  Q    S+  LLM+N+  +ED
Sbjct: 8    VSKYIQVALGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQATQASKLRLLMKNLDVLED 67

Query: 588  IIADTDLMRLEREILAQIGKLGALKLFNACLSRTLKEPTSVRWPIPVTKLPSSCPVDGVK 767
            + AD++ +RLE +IL Q+ +LGAL+LF++CLSRT+K  TS       T++   C      
Sbjct: 68   MFADSNAVRLEGDILEQLERLGALRLFHSCLSRTIKSYTSFDLSDGPTEIVEEC------ 121

Query: 768  NDGLKKVTVXXXXXXXXXXXXXXATVKAAKISCVSPIKKINKISRLAXXXXXXXXXXXXX 947
                 KV V               +   +     SP K I+K  +               
Sbjct: 122  -----KVFVHSGKKELRKLRRKRTSDNESPTIQESPSKTISKDLQQLKFAIAGRTPRSRN 176

Query: 948  XGLVIARNESEMSRGVKDVANLERIRTNLEEESGKVVSFSIWAEAAGVDEKELQQRLHFG 1127
                 ARNE++MS GVK VA LE+IRT LE+E+G++ S S WAEAAG+ +KELQQ LH+G
Sbjct: 177  KRQKTARNEADMSSGVKRVAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYG 236

Query: 1128 WSCRDRLLRSTRSLVMYLARNYRGLGIPLEDLLQAGNMGVLQGSERFDHTRGYQFSTYVQ 1307
            W CRD LLRST SLV+++ARNY GLG+  EDL+QAGN+GVLQG+ERFD +RGY+FSTYVQ
Sbjct: 237  WHCRDELLRSTHSLVLFIARNYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQ 296

Query: 1308 YWIRKSMLKLVAQHSKGIQIPMTVNRVINQIQRARRA 1418
            YWIRKSM  LVA+H++G++IP T+++VINQ+ +AR+A
Sbjct: 297  YWIRKSMSTLVAKHARGVRIPCTLSKVINQVHKARKA 333