BLASTX nr result

ID: Sinomenium21_contig00018000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00018000
         (524 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...    67   3e-09
emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]    67   3e-09
ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot...    64   2e-08
ref|XP_007150101.1| hypothetical protein PHAVU_005G126800g [Phas...    60   3e-07
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...    60   4e-07
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...    60   4e-07
ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis prot...    57   2e-06
gb|AFK42403.1| unknown [Lotus japonicus]                               56   5e-06

>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = +3

Query: 3   IHMVKAPAALQQEPSLTLPKIKVKVSQQLAEENQPMEE 116
           IHMVKAPA LQQEPSLTLPKIKVKVSQQ +EEN  MEE
Sbjct: 131 IHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE 168


>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = +3

Query: 3   IHMVKAPAALQQEPSLTLPKIKVKVSQQLAEENQPMEE 116
           IHMVKAPA LQQEPSLTLPKIKVKVSQQ +EEN  MEE
Sbjct: 187 IHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE 224


>ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297740070|emb|CBI30252.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = +3

Query: 3   IHMVKAPAALQQEPSLTLPKIKVKVSQQLAEENQPMEE 116
           IHMVKAPA L++EPSLTLPKIKVKVS+  AEEN PMEE
Sbjct: 131 IHMVKAPAVLEKEPSLTLPKIKVKVSRPQAEENHPMEE 168


>ref|XP_007150101.1| hypothetical protein PHAVU_005G126800g [Phaseolus vulgaris]
           gi|561023365|gb|ESW22095.1| hypothetical protein
           PHAVU_005G126800g [Phaseolus vulgaris]
          Length = 168

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = +3

Query: 3   IHMVKAPAALQQEPSLTLPKIKVKVSQQLAEENQPMEE 116
           I +VKAP+ LQQ+PSLTLPKIKVKVSQQ +EEN+ MEE
Sbjct: 131 ISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENRAMEE 168


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   IHMVKAPAALQQEPSLTLPKIKVKVSQQLAEENQPMEE 116
           I +VKAP+ LQQ+PSLTLPKIKVKVSQQ +EEN  MEE
Sbjct: 131 ISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   IHMVKAPAALQQEPSLTLPKIKVKVSQQLAEENQPMEE 116
           I +VKAP+ LQQ+PSLTLPKIKVKVSQQ +EEN  MEE
Sbjct: 131 ISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   IHMVKAPAALQQEPSLTLPKIKVKVSQQLAEENQPMEE 116
           I +VKAP+ LQ++PSLTLPKIKV VSQQ +E+N PMEE
Sbjct: 131 ISLVKAPSVLQKDPSLTLPKIKVGVSQQQSEDNHPMEE 168


>gb|AFK42403.1| unknown [Lotus japonicus]
          Length = 168

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = +3

Query: 3   IHMVKAPAALQQEPSLTLPKIKVKVSQQLAEENQPMEE 116
           I+MVKAP+  QQ+PS TLP IKVKVSQQ + EN PMEE
Sbjct: 131 INMVKAPSVFQQDPSYTLPAIKVKVSQQKSVENHPMEE 168


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