BLASTX nr result
ID: Sinomenium21_contig00017596
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00017596
(590 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266... 283 2e-74
ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra... 281 1e-73
ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II tra... 279 4e-73
ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II tra... 274 1e-71
ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citr... 273 2e-71
ref|XP_003549778.1| PREDICTED: mediator of RNA polymerase II tra... 273 3e-71
ref|XP_007154971.1| hypothetical protein PHAVU_003G161800g [Phas... 270 3e-70
gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis] 268 6e-70
ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Popu... 266 2e-69
ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prun... 266 4e-69
ref|XP_004508515.1| PREDICTED: mediator of RNA polymerase II tra... 265 9e-69
ref|XP_003609292.1| hypothetical protein MTR_4g114100 [Medicago ... 262 5e-68
ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II tra... 260 2e-67
ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II tra... 257 2e-66
ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II tra... 256 3e-66
gb|EYU29301.1| hypothetical protein MIMGU_mgv1a002570mg [Mimulus... 256 4e-66
ref|XP_007013390.1| RNA polymerase II transcription mediators is... 253 3e-65
ref|XP_006842865.1| hypothetical protein AMTR_s00081p00160620 [A... 253 4e-65
ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutr... 252 6e-65
ref|XP_002873986.1| hypothetical protein ARALYDRAFT_351112 [Arab... 246 3e-63
>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
gi|147821405|emb|CAN63500.1| hypothetical protein
VITISV_011675 [Vitis vinifera]
gi|297738929|emb|CBI28174.3| unnamed protein product
[Vitis vinifera]
Length = 660
Score = 283 bits (725), Expect = 2e-74
Identities = 143/166 (86%), Positives = 151/166 (90%), Gaps = 1/166 (0%)
Frame = +1
Query: 94 GDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDAKKQK-TS 270
G M+ISLDKLPIKRLDAIEE G ERFP DVG+D KR+ LIRRIDFAWAVEKD KKQK S
Sbjct: 3 GKMEISLDKLPIKRLDAIEENGAERFPTDVGYDDKRVSLIRRIDFAWAVEKDTKKQKKAS 62
Query: 271 KETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDLSV 450
KE TPWPWQSLVENL+LAHQELSVIIDLI+TVEANDAVTVA MTRPKPLPNEVLSDL V
Sbjct: 63 KEEATPWPWQSLVENLRLAHQELSVIIDLISTVEANDAVTVASMTRPKPLPNEVLSDLGV 122
Query: 451 AAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
+AATKLQCFRHL KY KQSAK+LEQQ+AREARFYGALIRLQQNWKV
Sbjct: 123 SAATKLQCFRHLSKYFKQSAKALEQQIAREARFYGALIRLQQNWKV 168
>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Cucumis sativus]
gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 17-like [Cucumis
sativus]
Length = 662
Score = 281 bits (719), Expect = 1e-73
Identities = 137/167 (82%), Positives = 155/167 (92%), Gaps = 3/167 (1%)
Frame = +1
Query: 97 DMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKD---AKKQKT 267
DMK+SLDKLP+KRL+AIEE G+ERFP DVG+++KRL LIRRIDFAWA+EKD K++K+
Sbjct: 4 DMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKS 63
Query: 268 SKETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDLS 447
SKE++TPW WQS++ENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+DL
Sbjct: 64 SKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLADLG 123
Query: 448 VAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
V+ ATKLQCFRHLGKY KQSAK LE+QVAREARFYGALIRLQQNWKV
Sbjct: 124 VSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKV 170
>ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like isoform X1 [Glycine max]
gi|571454302|ref|XP_006579749.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 17-like isoform
X2 [Glycine max]
Length = 659
Score = 279 bits (714), Expect = 4e-73
Identities = 140/170 (82%), Positives = 154/170 (90%), Gaps = 3/170 (1%)
Frame = +1
Query: 88 EGGDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDA---KK 258
+G ++ISLDKLPIKRLD+IEE GIERFPPDV +D+KRL LIRRIDFAWAVEKD KK
Sbjct: 3 DGMQLQISLDKLPIKRLDSIEENGIERFPPDVDYDEKRLSLIRRIDFAWAVEKDEEKKKK 62
Query: 259 QKTSKETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 438
QK+SKET+TPW WQ +VENLQLAHQELSVIIDLINTVEANDAVTVA MTRPK LPNE LS
Sbjct: 63 QKSSKETSTPWQWQGMVENLQLAHQELSVIIDLINTVEANDAVTVASMTRPKLLPNEALS 122
Query: 439 DLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
DL+V+AATKLQC+RH+GKY KQSAK+ EQQVAREARFYGALIRLQQNWKV
Sbjct: 123 DLAVSAATKLQCYRHVGKYFKQSAKAFEQQVAREARFYGALIRLQQNWKV 172
>ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Citrus sinensis]
Length = 657
Score = 274 bits (701), Expect = 1e-71
Identities = 139/172 (80%), Positives = 154/172 (89%), Gaps = 7/172 (4%)
Frame = +1
Query: 94 GDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDAKKQ--KT 267
G+++IS+DKLP+KRLDAIEE G ERFPPDVG+D+KR LIRRIDFAWAVEKD K+ K+
Sbjct: 3 GNLEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKS 62
Query: 268 SKE-----TTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 432
SKE TTTPW WQ++VENLQ AHQELSVIIDLINTVEANDAVTVAGMTRPK LPNEV
Sbjct: 63 SKESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEV 122
Query: 433 LSDLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
LSDLSV+AATKLQC+RHLG Y KQSAKSLEQQ+A+EARFYGALIRLQQNWKV
Sbjct: 123 LSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKV 174
>ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citrus clementina]
gi|557554196|gb|ESR64210.1| hypothetical protein
CICLE_v10007689mg [Citrus clementina]
Length = 657
Score = 273 bits (699), Expect = 2e-71
Identities = 139/172 (80%), Positives = 153/172 (88%), Gaps = 7/172 (4%)
Frame = +1
Query: 94 GDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDAKKQ--KT 267
G+++IS+DKLP+KRLDAIEE G ERFPPDVG+D+KR LIRRIDFAWAVEKD K+ K
Sbjct: 3 GNLEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKR 62
Query: 268 SKE-----TTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 432
SKE TTTPW WQ++VENLQ AHQELSVIIDLINTVEANDAVTVAGMTRPK LPNEV
Sbjct: 63 SKESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEV 122
Query: 433 LSDLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
LSDLSV+AATKLQC+RHLG Y KQSAKSLEQQ+A+EARFYGALIRLQQNWKV
Sbjct: 123 LSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKV 174
>ref|XP_003549778.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like isoform X1 [Glycine max]
gi|571535792|ref|XP_006600757.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 17-like isoform
X2 [Glycine max]
Length = 660
Score = 273 bits (698), Expect = 3e-71
Identities = 138/171 (80%), Positives = 152/171 (88%), Gaps = 4/171 (2%)
Frame = +1
Query: 88 EGGDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDA----K 255
+G ++ISLDKLPIKRLD+IEE GIERFP DV +D+KRL LIRRIDFAWAVEKD K
Sbjct: 3 DGMQLQISLDKLPIKRLDSIEENGIERFPLDVDYDEKRLSLIRRIDFAWAVEKDEEKKKK 62
Query: 256 KQKTSKETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL 435
KQK+SKET+ PW WQ +VENLQLAHQELSVIIDLINTVEANDAVTVA MTRPK LPNE L
Sbjct: 63 KQKSSKETSAPWQWQGMVENLQLAHQELSVIIDLINTVEANDAVTVASMTRPKLLPNEAL 122
Query: 436 SDLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
SDL+V+AATKLQC+RH+GKY KQSAK+ EQQVAREARFYGALIRLQQNWKV
Sbjct: 123 SDLAVSAATKLQCYRHVGKYFKQSAKAFEQQVAREARFYGALIRLQQNWKV 173
>ref|XP_007154971.1| hypothetical protein PHAVU_003G161800g [Phaseolus vulgaris]
gi|561028325|gb|ESW26965.1| hypothetical protein
PHAVU_003G161800g [Phaseolus vulgaris]
Length = 663
Score = 270 bits (689), Expect = 3e-70
Identities = 134/167 (80%), Positives = 152/167 (91%), Gaps = 3/167 (1%)
Frame = +1
Query: 97 DMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDAKKQK---T 267
D++ISLDKLPIKRLD+IEE G+ERFPPDV +D+KRL LIRRIDFAWA+EKD +K+K +
Sbjct: 6 DLQISLDKLPIKRLDSIEENGMERFPPDVDYDEKRLSLIRRIDFAWAIEKDEEKKKQKKS 65
Query: 268 SKETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDLS 447
SKET+TPW WQS+VENLQLAHQELSVIIDLINTVEANDAVTVA MTRPK PNE LSDL+
Sbjct: 66 SKETSTPWQWQSMVENLQLAHQELSVIIDLINTVEANDAVTVASMTRPKLQPNEALSDLA 125
Query: 448 VAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
V+AA+KLQC+R +GKY KQSAK+ EQQVAREARFYGALIRLQQNWKV
Sbjct: 126 VSAASKLQCYRQVGKYFKQSAKAFEQQVAREARFYGALIRLQQNWKV 172
>gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]
Length = 701
Score = 268 bits (686), Expect = 6e-70
Identities = 134/165 (81%), Positives = 150/165 (90%), Gaps = 2/165 (1%)
Frame = +1
Query: 100 MKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDAKKQ--KTSK 273
+++SLDKLP+KRLD IEE G ERFP DVG+D+KRL LIRRIDFAWAVEKD KK+ K++K
Sbjct: 5 VQVSLDKLPVKRLDVIEENGAERFPSDVGYDEKRLSLIRRIDFAWAVEKDEKKKQKKSAK 64
Query: 274 ETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDLSVA 453
E+ TPWPWQ++VENLQLA QELSVI+DLINTVEANDAVTVAGMTRPKPLPNEVLSDL+V+
Sbjct: 65 ESLTPWPWQTMVENLQLAQQELSVIVDLINTVEANDAVTVAGMTRPKPLPNEVLSDLAVS 124
Query: 454 AATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
AA KLQ FR LGKY KQSAK+LEQQV REARFYGALIRLQQNWKV
Sbjct: 125 AAIKLQGFRSLGKYFKQSAKALEQQVVREARFYGALIRLQQNWKV 169
>ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Populus trichocarpa]
gi|550322157|gb|ERP52192.1| hypothetical protein
POPTR_0015s06780g [Populus trichocarpa]
Length = 667
Score = 266 bits (681), Expect = 2e-69
Identities = 130/175 (74%), Positives = 154/175 (88%), Gaps = 10/175 (5%)
Frame = +1
Query: 94 GDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDAKKQKTSK 273
G +++SLDKLP+KRL++IEE G ERFP D+G+D+K++ LIRRIDFAWAVEK+ K++K K
Sbjct: 3 GKLEMSLDKLPVKRLESIEENGFERFPTDIGYDEKQVALIRRIDFAWAVEKEDKEKKQKK 62
Query: 274 E----------TTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLP 423
+ TTTPWPWQ++VENL LAHQELSVIIDLINTVEANDAVTVAGMTRPKPLP
Sbjct: 63 KQKKSSRESSSTTTPWPWQNMVENLHLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLP 122
Query: 424 NEVLSDLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
NE+L+DL+V+ ATKLQC+R+LGKY KQSAK+LEQQVAREARFYGALIRLQQNWKV
Sbjct: 123 NEILADLAVSTATKLQCYRNLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKV 177
>ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prunus persica]
gi|462400139|gb|EMJ05807.1| hypothetical protein
PRUPE_ppa002594mg [Prunus persica]
Length = 654
Score = 266 bits (679), Expect = 4e-69
Identities = 135/168 (80%), Positives = 151/168 (89%), Gaps = 3/168 (1%)
Frame = +1
Query: 94 GDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDA--KKQKT 267
G M+ISLDKLPIKRLD IEE G+ERFPPDVG+++KR LIRRIDFAWAVEKD K++K+
Sbjct: 3 GKMEISLDKLPIKRLDVIEENGLERFPPDVGYEEKRQSLIRRIDFAWAVEKDENKKQKKS 62
Query: 268 SKETT-TPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDL 444
SKE+ T W WQS+VENLQLAHQELSVIIDLINTVE NDAVTVA MTRPKP +EV+SDL
Sbjct: 63 SKESAATQWQWQSMVENLQLAHQELSVIIDLINTVETNDAVTVASMTRPKPFHDEVMSDL 122
Query: 445 SVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
+V+AATKLQCFRHLGKY KQSAK+LE+QVAREARFYGALIRLQQNWKV
Sbjct: 123 AVSAATKLQCFRHLGKYFKQSAKALERQVAREARFYGALIRLQQNWKV 170
>ref|XP_004508515.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like isoform X1 [Cicer arietinum]
gi|502151591|ref|XP_004508516.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 17-like isoform
X2 [Cicer arietinum] gi|502151593|ref|XP_004508517.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 17-like isoform X3 [Cicer arietinum]
gi|502151595|ref|XP_004508518.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 17-like isoform
X4 [Cicer arietinum]
Length = 658
Score = 265 bits (676), Expect = 9e-69
Identities = 129/170 (75%), Positives = 153/170 (90%), Gaps = 3/170 (1%)
Frame = +1
Query: 88 EGGDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDAKKQK- 264
EG ++++SLDKLPIKRLD+IEE G+ERFP + +D+KR+ LIRRIDFAWA+EKD +K+K
Sbjct: 3 EGMELQLSLDKLPIKRLDSIEENGMERFPLNADYDEKRISLIRRIDFAWAIEKDEEKKKQ 62
Query: 265 --TSKETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 438
+SKET+TPW WQ +V+NL+LAHQELSVIIDLINTVEANDAVTVA MTRPKPLPNE LS
Sbjct: 63 KKSSKETSTPWQWQGMVDNLKLAHQELSVIIDLINTVEANDAVTVASMTRPKPLPNEALS 122
Query: 439 DLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
DL+V+AATKLQC+R +GKY KQSAK+ EQQ+AREARFYGALIRLQQNWKV
Sbjct: 123 DLAVSAATKLQCYRQVGKYFKQSAKAFEQQLAREARFYGALIRLQQNWKV 172
>ref|XP_003609292.1| hypothetical protein MTR_4g114100 [Medicago truncatula]
gi|355510347|gb|AES91489.1| hypothetical protein
MTR_4g114100 [Medicago truncatula]
Length = 856
Score = 262 bits (670), Expect = 5e-68
Identities = 131/169 (77%), Positives = 147/169 (86%), Gaps = 2/169 (1%)
Frame = +1
Query: 88 EGGDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDA--KKQ 261
EG ++++SLDKLPIKRLD+IEE G ERFP DV +D+KR+ LIRRIDFAWA+EKD KKQ
Sbjct: 3 EGMELQLSLDKLPIKRLDSIEENGNERFPLDVDYDEKRVSLIRRIDFAWAIEKDEEKKKQ 62
Query: 262 KTSKETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSD 441
K S + TTPW WQ +VENLQLAHQELSVIID INTVE NDAVTVA MTRPK LPNE LSD
Sbjct: 63 KKSSKETTPWQWQGMVENLQLAHQELSVIIDFINTVETNDAVTVASMTRPKSLPNEALSD 122
Query: 442 LSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
L+V+AATKLQC+R +GKY KQSAK+ EQQVAREARFYGALIRLQQNWKV
Sbjct: 123 LAVSAATKLQCYRQVGKYFKQSAKAFEQQVAREARFYGALIRLQQNWKV 171
>ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Fragaria vesca subsp. vesca]
Length = 655
Score = 260 bits (665), Expect = 2e-67
Identities = 130/169 (76%), Positives = 151/169 (89%), Gaps = 4/169 (2%)
Frame = +1
Query: 94 GDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKD--AKKQKT 267
G ++ISLDKLPIKRLD IEE G+ERFPP+VG+++KR LIRRIDFAWAVEKD +K++K
Sbjct: 3 GKLEISLDKLPIKRLDVIEENGLERFPPEVGYEEKRESLIRRIDFAWAVEKDDKSKQKKR 62
Query: 268 SKETTTP--WPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSD 441
S+ET+ P W +QS+V+NL LAHQELSVI+DLINTVEANDAVTVA MTRP+P PNE LSD
Sbjct: 63 SRETSAPAQWEFQSMVDNLHLAHQELSVIVDLINTVEANDAVTVASMTRPRPFPNEALSD 122
Query: 442 LSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
L+V+AATKLQCFRHLGKY KQSA +LEQQ+AREARFYGALIRLQQNWKV
Sbjct: 123 LAVSAATKLQCFRHLGKYFKQSANALEQQMAREARFYGALIRLQQNWKV 171
>ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Solanum lycopersicum]
Length = 663
Score = 257 bits (656), Expect = 2e-66
Identities = 133/175 (76%), Positives = 154/175 (88%), Gaps = 10/175 (5%)
Frame = +1
Query: 94 GDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKD--AKKQK- 264
G+++IS+DKLPIKRL+ IEE G ERFP D+G+D+K ++LIRRIDFAWAVE++ +KKQK
Sbjct: 3 GNLEISVDKLPIKRLEYIEEQGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEPSKKQKK 62
Query: 265 -----TSKETTT--PWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLP 423
+SKET++ PW WQSLVENL+LAHQEL VIIDLI+TVEANDAVTVAGMTRPK LP
Sbjct: 63 SSSATSSKETSSSQPWQWQSLVENLRLAHQELQVIIDLIHTVEANDAVTVAGMTRPKQLP 122
Query: 424 NEVLSDLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
NE LSDL+V+ ATKLQCFRHLGKY KQSAK+LEQQVAREARFYGALIRLQQNWKV
Sbjct: 123 NEHLSDLAVSMATKLQCFRHLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKV 177
>ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Solanum tuberosum]
Length = 663
Score = 256 bits (655), Expect = 3e-66
Identities = 133/175 (76%), Positives = 153/175 (87%), Gaps = 10/175 (5%)
Frame = +1
Query: 94 GDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKD--AKKQK- 264
GD++IS+DKLPIKRL+ IEE G ERFP D+G+D+K ++LIRRIDFAWAVE++ +KKQK
Sbjct: 3 GDLEISVDKLPIKRLEFIEEQGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEPSKKQKK 62
Query: 265 -----TSKETTT--PWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLP 423
+SKET++ PW WQSLVENL+LAHQEL VIIDLI+TVEANDAVTVA MTRPK LP
Sbjct: 63 SSSATSSKETSSSQPWQWQSLVENLRLAHQELQVIIDLIHTVEANDAVTVASMTRPKQLP 122
Query: 424 NEVLSDLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
NE LSDL+V+ ATKLQCFRHLGKY KQSAK+LEQQVAREARFYGALIRLQQNWKV
Sbjct: 123 NEHLSDLAVSMATKLQCFRHLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKV 177
>gb|EYU29301.1| hypothetical protein MIMGU_mgv1a002570mg [Mimulus guttatus]
Length = 657
Score = 256 bits (653), Expect = 4e-66
Identities = 131/175 (74%), Positives = 154/175 (88%), Gaps = 10/175 (5%)
Frame = +1
Query: 94 GDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKD--AKKQKT 267
G+++ISLDKLPIKRL++IEE G ERFP DV +D+KR++LIRRIDFAWAVE++ +KK+KT
Sbjct: 3 GNLEISLDKLPIKRLESIEEFGSERFPSDVDYDEKRVNLIRRIDFAWAVEREDPSKKRKT 62
Query: 268 ----SKETTTP----WPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLP 423
+KE+T+ W W+SLVENLQLAHQELSVIIDLINTVE NDAVTVAGMTRPKPLP
Sbjct: 63 DGATAKESTSTNQQQWQWKSLVENLQLAHQELSVIIDLINTVETNDAVTVAGMTRPKPLP 122
Query: 424 NEVLSDLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
NE LSDL+V+ ATKLQCFR LGKY KQSAK+LE+Q+AREARFYGALIRLQQNWK+
Sbjct: 123 NEHLSDLAVSTATKLQCFRSLGKYFKQSAKALEEQIAREARFYGALIRLQQNWKI 177
>ref|XP_007013390.1| RNA polymerase II transcription mediators isoform 1 [Theobroma
cacao] gi|590578008|ref|XP_007013391.1| RNA polymerase
II transcription mediators isoform 1 [Theobroma cacao]
gi|508783753|gb|EOY31009.1| RNA polymerase II
transcription mediators isoform 1 [Theobroma cacao]
gi|508783754|gb|EOY31010.1| RNA polymerase II
transcription mediators isoform 1 [Theobroma cacao]
Length = 663
Score = 253 bits (646), Expect = 3e-65
Identities = 128/172 (74%), Positives = 149/172 (86%), Gaps = 7/172 (4%)
Frame = +1
Query: 94 GDMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVEKDAK------ 255
G+++ISLDKLP++ LDAIEE G+ER+P ++ +D+KR+ LIRRIDFAWA+E D +
Sbjct: 3 GNLEISLDKLPVRALDAIEENGVERYPHELSYDEKRVSLIRRIDFAWALETDEERERKKK 62
Query: 256 -KQKTSKETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 432
K+K SK+ T W LVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV
Sbjct: 63 QKKKNSKDATATW----LVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 118
Query: 433 LSDLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
LSDL+V+AATKLQC+RHLGKY KQSAK+LEQQ+AREARFYGALIRLQQNWKV
Sbjct: 119 LSDLAVSAATKLQCYRHLGKYFKQSAKALEQQIAREARFYGALIRLQQNWKV 170
>ref|XP_006842865.1| hypothetical protein AMTR_s00081p00160620 [Amborella trichopoda]
gi|548845021|gb|ERN04540.1| hypothetical protein
AMTR_s00081p00160620 [Amborella trichopoda]
Length = 668
Score = 253 bits (645), Expect = 4e-65
Identities = 125/171 (73%), Positives = 148/171 (86%), Gaps = 3/171 (1%)
Frame = +1
Query: 85 MEGGDMKISLDKLPIKRLDAIEEIGIERFPP-DVGHDQKRLDLIRRIDFAWAVEKDAKKQ 261
M+GG++K+SLDKLPI+R+DA++E G E FPP DV D+K L L+RRIDF VEKDAKKQ
Sbjct: 1 MDGGNIKLSLDKLPIRRVDAVDENGTEHFPPSDVNQDEKYLSLLRRIDFTPVVEKDAKKQ 60
Query: 262 KTSKET--TTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL 435
K S+E + WPWQSLVENL+ AH ELSVIIDL++ VEANDAV VAGMTRPKPLPNEVL
Sbjct: 61 KVSRENQASQQWPWQSLVENLRQAHHELSVIIDLVHNVEANDAVAVAGMTRPKPLPNEVL 120
Query: 436 SDLSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
SDL+++ +TKLQCF+H+GKYLKQSAK+LE QVAREARFYG+LIRLQQNWKV
Sbjct: 121 SDLAISTSTKLQCFQHVGKYLKQSAKALEHQVAREARFYGSLIRLQQNWKV 171
>ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutrema salsugineum]
gi|557101675|gb|ESQ42038.1| hypothetical protein
EUTSA_v10012923mg [Eutrema salsugineum]
Length = 650
Score = 252 bits (643), Expect = 6e-65
Identities = 125/169 (73%), Positives = 148/169 (87%), Gaps = 5/169 (2%)
Frame = +1
Query: 97 DMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVE-----KDAKKQ 261
DM+ISLD+LPIKRL++IEE G ERFP DV +D KR+ LIRRIDFAWA+E K K++
Sbjct: 4 DMEISLDRLPIKRLESIEENGAERFPSDVNYDDKRVSLIRRIDFAWALEEEDELKKKKQK 63
Query: 262 KTSKETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSD 441
K+SKE++ W W+ +VENLQLAHQELSVIIDLINTVEANDAVTVAGMT+PKP+PNE+LSD
Sbjct: 64 KSSKESSEQWQWKGMVENLQLAHQELSVIIDLINTVEANDAVTVAGMTKPKPMPNELLSD 123
Query: 442 LSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
L+V+ ATKLQ +RHLGKY KQSAK+LEQ+V REARFYGALIRLQ+NWKV
Sbjct: 124 LAVSTATKLQSYRHLGKYFKQSAKALEQKVNREARFYGALIRLQRNWKV 172
>ref|XP_002873986.1| hypothetical protein ARALYDRAFT_351112 [Arabidopsis lyrata subsp.
lyrata] gi|297319823|gb|EFH50245.1| hypothetical protein
ARALYDRAFT_351112 [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 246 bits (629), Expect = 3e-63
Identities = 122/169 (72%), Positives = 147/169 (86%), Gaps = 5/169 (2%)
Frame = +1
Query: 97 DMKISLDKLPIKRLDAIEEIGIERFPPDVGHDQKRLDLIRRIDFAWAVE-----KDAKKQ 261
DM+ISLD+LPIKRL++IEE G ERFP DVG+D KR+ LIRRIDFAWA+E K K++
Sbjct: 4 DMEISLDRLPIKRLESIEENGAERFPSDVGYDDKRVSLIRRIDFAWALEEEDELKKKKQK 63
Query: 262 KTSKETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSD 441
K+SK++ W W+ +VENLQLAHQELSVIIDLI+TV+ANDAVTVAGMTRPKPLPNE+LSD
Sbjct: 64 KSSKDSAEQWKWKGMVENLQLAHQELSVIIDLIDTVQANDAVTVAGMTRPKPLPNEILSD 123
Query: 442 LSVAAATKLQCFRHLGKYLKQSAKSLEQQVAREARFYGALIRLQQNWKV 588
L+V+ ATKLQ +R+LG Y KQSAK+LEQ++ REARFYGALIRLQ+NWKV
Sbjct: 124 LAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKV 172