BLASTX nr result

ID: Sinomenium21_contig00017405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00017405
         (453 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase...    76   5e-12
emb|CBI27108.3| unnamed protein product [Vitis vinifera]               76   5e-12
ref|XP_004298318.1| PREDICTED: uncharacterized protein LOC101293...    59   7e-07
ref|XP_002315970.2| hypothetical protein POPTR_0010s14260g [Popu...    59   9e-07

>ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
           [Vitis vinifera]
          Length = 1342

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
 Frame = -3

Query: 439 RASASRKQVRSREKNSTLSTPLVEVI*EKHNQSGLQVIRHFVSRRKSQQLTETPEIQESD 260
           ++S  RKQ   R +  T++  L E   +++ Q G  VI    S RK Q+LTE+ E+Q SD
Sbjct: 356 KSSGYRKQFHGRGEKLTVAGNLDEETRKQYGQKGKLVIGQSESGRKYQRLTESSEVQGSD 415

Query: 259 IGTSSSSQLRFSGREENLSATGTVVQEAREKHNRKGNLIIRENRSSLNS-QLETKILVHD 83
           +  +S SQ +FSG EEN++    +VQ   E+H +K   I  +++   NS Q        +
Sbjct: 416 VERTSGSQKQFSGSEENVTTAKNLVQGRGEEHGKKDAHITVQDKLKRNSQQFSETSRTQE 475

Query: 82  IDLERTSPSQRTYVSRLNNTVDNS 11
           +D+  TS S R   + + N  +NS
Sbjct: 476 VDVRNTSTSLRQSGTTMKNWNENS 499



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
 Frame = -3

Query: 451 SVAERASASRKQVRSREKNSTLSTPLVEVI*EKHNQSGLQVIRHFVSRRKSQQLTETPEI 272
           S  ER S S+KQ    E+N T +  LV+   E+H +    +      +R SQQ +ET   
Sbjct: 414 SDVERTSGSQKQFSGSEENVTTAKNLVQGRGEEHGKKDAHITVQDKLKRNSQQFSETSRT 473

Query: 271 QESDIGTSSSSQLRFSGR-----EENLSATGTVVQEAREKHNRKGNLIIRENRSSLNSQL 107
           QE D+  +S+S LR SG       EN ++    VQE + + ++ G  I     S  N Q 
Sbjct: 474 QEVDVRNTSTS-LRQSGTTMKNWNENSTSFLGSVQETKGQQHQTGEWITGGINSRRNFQQ 532

Query: 106 ETKIL-VHDIDLERTSPSQRTYVSRLNNTVDN 14
            T+I  +HD D+   S SQ  Y +R+N    N
Sbjct: 533 FTEISDIHDSDIRNNSISQTQYETRMNKQEGN 564


>emb|CBI27108.3| unnamed protein product [Vitis vinifera]
          Length = 1151

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
 Frame = -3

Query: 439 RASASRKQVRSREKNSTLSTPLVEVI*EKHNQSGLQVIRHFVSRRKSQQLTETPEIQESD 260
           ++S  RKQ   R +  T++  L E   +++ Q G  VI    S RK Q+LTE+ E+Q SD
Sbjct: 184 KSSGYRKQFHGRGEKLTVAGNLDEETRKQYGQKGKLVIGQSESGRKYQRLTESSEVQGSD 243

Query: 259 IGTSSSSQLRFSGREENLSATGTVVQEAREKHNRKGNLIIRENRSSLNS-QLETKILVHD 83
           +  +S SQ +FSG EEN++    +VQ   E+H +K   I  +++   NS Q        +
Sbjct: 244 VERTSGSQKQFSGSEENVTTAKNLVQGRGEEHGKKDAHITVQDKLKRNSQQFSETSRTQE 303

Query: 82  IDLERTSPSQRTYVSRLNNTVDNS 11
           +D+  TS S R   + + N  +NS
Sbjct: 304 VDVRNTSTSLRQSGTTMKNWNENS 327



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
 Frame = -3

Query: 451 SVAERASASRKQVRSREKNSTLSTPLVEVI*EKHNQSGLQVIRHFVSRRKSQQLTETPEI 272
           S  ER S S+KQ    E+N T +  LV+   E+H +    +      +R SQQ +ET   
Sbjct: 242 SDVERTSGSQKQFSGSEENVTTAKNLVQGRGEEHGKKDAHITVQDKLKRNSQQFSETSRT 301

Query: 271 QESDIGTSSSSQLRFSGR-----EENLSATGTVVQEAREKHNRKGNLIIRENRSSLNSQL 107
           QE D+  +S+S LR SG       EN ++    VQE + + ++ G  I     S  N Q 
Sbjct: 302 QEVDVRNTSTS-LRQSGTTMKNWNENSTSFLGSVQETKGQQHQTGEWITGGINSRRNFQQ 360

Query: 106 ETKIL-VHDIDLERTSPSQRTYVSRLNNTVDN 14
            T+I  +HD D+   S SQ  Y +R+N    N
Sbjct: 361 FTEISDIHDSDIRNNSISQTQYETRMNKQEGN 392


>ref|XP_004298318.1| PREDICTED: uncharacterized protein LOC101293296 [Fragaria vesca
           subsp. vesca]
          Length = 1371

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
 Frame = -3

Query: 439 RASASRKQVRSREKNS--TLSTPLVEVI*EKHNQSGLQVIRHFVSRRKSQQLTETPEIQE 266
           +AS S+KQ      NS  T  T +      +++Q+G QV+    SRR  Q+  E  E+  
Sbjct: 404 KASGSQKQFDDERGNSYWTRETKV------QYSQTGNQVLET-ESRRTLQEGKEKSEVHR 456

Query: 265 SDIGTSSSSQLRFSGREENLSATGTVVQEAREKHNRKGNLIIRENRSSLNSQLETKI-LV 89
           +D  T+S SQ R S +E+NL+    +VQE R++H +    I +    +++ Q  ++I  V
Sbjct: 457 TDTETTSRSQQRHSDKEQNLATATNIVQETRDEHYKTTGRITQREDINIDIQKLSRISQV 516

Query: 88  HDIDLERTSPSQR 50
             +D ERTS  QR
Sbjct: 517 QVVDTERTSNWQR 529


>ref|XP_002315970.2| hypothetical protein POPTR_0010s14260g [Populus trichocarpa]
           gi|550329788|gb|EEF02141.2| hypothetical protein
           POPTR_0010s14260g [Populus trichocarpa]
          Length = 844

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 43/145 (29%), Positives = 68/145 (46%)
 Frame = -3

Query: 439 RASASRKQVRSREKNSTLSTPLVEVI*EKHNQSGLQVIRHFVSRRKSQQLTETPEIQESD 260
           + S+S  Q+ + ++ S L+  L +   +++ Q G QV      RR  Q++T   E    +
Sbjct: 15  KVSSSHNQIGNEDEKS-LAVNLEKETRKRYCQMGDQVKEQSEFRRSYQEITNKQERSGIN 73

Query: 259 IGTSSSSQLRFSGREENLSATGTVVQEAREKHNRKGNLIIRENRSSLNSQLETKILVHDI 80
           +  +S SQ RFSGREENL     V +   E++ R G    + N      QL       + 
Sbjct: 74  VEKASQSQKRFSGREENLVDANLVWEGRDERYKRVGETAAKNNIRRATHQLIDTSTTENA 133

Query: 79  DLERTSPSQRTYVSRLNNTVDNSAM 5
             ER S  QR   SR+   V++ A+
Sbjct: 134 STERVSNLQRQSESRMKILVEDRAL 158


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