BLASTX nr result
ID: Sinomenium21_contig00017170
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00017170
(324 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006434118.1| hypothetical protein CICLE_v10002692mg [Citr... 100 2e-19
gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis] 98 1e-18
ref|XP_006355960.1| PREDICTED: 30S ribosomal protein S13, chloro... 97 3e-18
ref|XP_004238695.1| PREDICTED: 30S ribosomal protein S13, chloro... 97 3e-18
ref|XP_006827867.1| hypothetical protein AMTR_s00008p00089340 [A... 96 4e-18
ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloro... 96 5e-18
gb|EXB44329.1| 30S ribosomal protein S13 [Morus notabilis] 95 9e-18
ref|XP_002306609.2| hypothetical protein POPTR_0005s16160g [Popu... 95 1e-17
ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus... 94 2e-17
ref|XP_002302256.1| hypothetical protein POPTR_0002s08900g [Popu... 94 2e-17
ref|XP_007018955.1| Ribosomal protein S13/S18 family [Theobroma ... 92 8e-17
gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras... 92 1e-16
ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro... 92 1e-16
ref|XP_006399943.1| hypothetical protein EUTSA_v10014848mg [Eutr... 91 2e-16
ref|XP_006399942.1| hypothetical protein EUTSA_v10014848mg [Eutr... 91 2e-16
ref|NP_568299.1| 30S ribosomal protein S13 [Arabidopsis thaliana... 91 2e-16
ref|XP_006288790.1| hypothetical protein CARUB_v10002113mg [Caps... 91 2e-16
pir||T48605 ribosomal protein S13-like protein F18O22.110 [impor... 91 2e-16
gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi] gi|1... 90 3e-16
gb|EYU22910.1| hypothetical protein MIMGU_mgv1a015166mg [Mimulus... 90 4e-16
>ref|XP_006434118.1| hypothetical protein CICLE_v10002692mg [Citrus clementina]
gi|568837402|ref|XP_006472713.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like [Citrus
sinensis] gi|557536240|gb|ESR47358.1| hypothetical
protein CICLE_v10002692mg [Citrus clementina]
Length = 169
Score = 100 bits (249), Expect = 2e-19
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRG+RHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR
Sbjct: 124 RLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 169
>gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis]
Length = 165
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGKRVAIAGKKKAPR
Sbjct: 120 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 165
>ref|XP_006355960.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Solanum
tuberosum]
Length = 168
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGK+VAIAGKKKAPR
Sbjct: 123 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKAPR 168
>ref|XP_004238695.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Solanum
lycopersicum]
Length = 168
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGK+VAIAGKKKAPR
Sbjct: 123 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKAPR 168
>ref|XP_006827867.1| hypothetical protein AMTR_s00008p00089340 [Amborella trichopoda]
gi|548832502|gb|ERM95283.1| hypothetical protein
AMTR_s00008p00089340 [Amborella trichopoda]
Length = 167
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHI GLPCRGQHTKNNCRTLKGK+VAIAGKKK PR
Sbjct: 122 RLKEIQCYRGVRHIMGLPCRGQHTKNNCRTLKGKKVAIAGKKKTPR 167
>ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Cucumis
sativus] gi|449518817|ref|XP_004166432.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like [Cucumis
sativus]
Length = 167
Score = 95.9 bits (237), Expect = 5e-18
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRG+RHIQGLPCRGQ TKNNCRTLKGK++AIAGKKKAPR
Sbjct: 122 RLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKAPR 167
>gb|EXB44329.1| 30S ribosomal protein S13 [Morus notabilis]
Length = 168
Score = 95.1 bits (235), Expect = 9e-18
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHI+GLPCRGQ TKNNCRTLKGK+VAIAGKKKAPR
Sbjct: 123 RLKEIQCYRGVRHIKGLPCRGQRTKNNCRTLKGKKVAIAGKKKAPR 168
>ref|XP_002306609.2| hypothetical protein POPTR_0005s16160g [Populus trichocarpa]
gi|550339105|gb|EEE93605.2| hypothetical protein
POPTR_0005s16160g [Populus trichocarpa]
Length = 168
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGKRV+I GKKKAPR
Sbjct: 123 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKKKAPR 168
>ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13,
putative [Ricinus communis]
Length = 290
Score = 94.4 bits (233), Expect = 2e-17
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGKRV +AGKKK PR
Sbjct: 245 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVTVAGKKKTPR 290
>ref|XP_002302256.1| hypothetical protein POPTR_0002s08900g [Populus trichocarpa]
gi|118488232|gb|ABK95935.1| unknown [Populus
trichocarpa] gi|222843982|gb|EEE81529.1| hypothetical
protein POPTR_0002s08900g [Populus trichocarpa]
Length = 168
Score = 94.4 bits (233), Expect = 2e-17
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRG+RHIQGLPCRGQ TKNNCRTLKGKRV+I GKKKAPR
Sbjct: 123 RLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKKKAPR 168
>ref|XP_007018955.1| Ribosomal protein S13/S18 family [Theobroma cacao]
gi|508724283|gb|EOY16180.1| Ribosomal protein S13/S18
family [Theobroma cacao]
Length = 168
Score = 92.0 bits (227), Expect = 8e-17
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNN RTLKGKRV +AGKKKAPR
Sbjct: 123 RLKEIQCYRGVRHIQGLPCRGQRTKNNTRTLKGKRVTVAGKKKAPR 168
>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
Length = 168
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = -3
Query: 319 LKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
LKEIQC+RG+RHIQGLPCRGQ TKNNCRTLKGKRV +AGKKKAPR
Sbjct: 124 LKEIQCHRGIRHIQGLPCRGQRTKNNCRTLKGKRVTVAGKKKAPR 168
>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
product [Vitis vinifera]
Length = 167
Score = 91.7 bits (226), Expect = 1e-16
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKA 191
RLKEIQCYRG+RHIQGLPCRGQ TKNNCRTLKGKRV+IAGKKKA
Sbjct: 123 RLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIAGKKKA 166
>ref|XP_006399943.1| hypothetical protein EUTSA_v10014848mg [Eutrema salsugineum]
gi|557101033|gb|ESQ41396.1| hypothetical protein
EUTSA_v10014848mg [Eutrema salsugineum]
Length = 169
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGK+VAIAGKKK +
Sbjct: 124 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKVSK 169
>ref|XP_006399942.1| hypothetical protein EUTSA_v10014848mg [Eutrema salsugineum]
gi|557101032|gb|ESQ41395.1| hypothetical protein
EUTSA_v10014848mg [Eutrema salsugineum]
Length = 168
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGK+VAIAGKKK +
Sbjct: 123 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKVSK 168
>ref|NP_568299.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
gi|1173194|sp|P42732.1|RR13_ARATH RecName: Full=30S
ribosomal protein S13, chloroplastic; AltName:
Full=CS13; Flags: Precursor gi|16767|emb|CAA79013.1|
chloroplast 30S ribosomal protein S13 [Arabidopsis
thaliana] gi|662869|emb|CAA88028.1| chloroplast
ribosomal protein S13 [Arabidopsis thaliana]
gi|1107483|emb|CAA63021.1| 30S ribosomal protein S13
[Arabidopsis thaliana] gi|1515107|emb|CAA60413.1|
plastid ribosomal protein S13 [Arabidopsis thaliana]
gi|14517397|gb|AAK62589.1| AT5g14320/F18O22_110
[Arabidopsis thaliana] gi|15450549|gb|AAK96452.1|
AT5g14320/F18O22_110 [Arabidopsis thaliana]
gi|332004633|gb|AED92016.1| 30S ribosomal protein S13
[Arabidopsis thaliana]
Length = 169
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGK++AIAGKKK +
Sbjct: 124 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKVSK 169
>ref|XP_006288790.1| hypothetical protein CARUB_v10002113mg [Capsella rubella]
gi|482557496|gb|EOA21688.1| hypothetical protein
CARUB_v10002113mg [Capsella rubella]
Length = 169
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGK++AIAGKKK +
Sbjct: 124 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKVSK 169
>pir||T48605 ribosomal protein S13-like protein F18O22.110 [imported] -
Arabidopsis thaliana gi|7573457|emb|CAB87771.1|
ribosomal protein precursor-like [Arabidopsis thaliana]
Length = 197
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 185
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGK++AIAGKKK +
Sbjct: 152 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKVSK 197
>gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi]
gi|169635172|gb|ACA58361.1| 30S ribosomal protein S13-2
[Arachis diogoi]
Length = 121
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 194
RLKEIQCYRG+RHIQGLPCRGQ TKNNCRTLKGK+VAIAGKKK
Sbjct: 78 RLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 120
>gb|EYU22910.1| hypothetical protein MIMGU_mgv1a015166mg [Mimulus guttatus]
Length = 166
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/43 (95%), Positives = 41/43 (95%)
Frame = -3
Query: 322 RLKEIQCYRGVRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 194
RLKEIQCYRGVRHIQGLPCRGQ TKNNCRTLKGKRVAI GKKK
Sbjct: 123 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKK 165