BLASTX nr result
ID: Sinomenium21_contig00016810
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00016810
(643 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 186 4e-45
emb|CBI16834.3| unnamed protein product [Vitis vinifera] 186 4e-45
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 175 9e-42
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 168 1e-39
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 168 1e-39
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 168 1e-39
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 168 1e-39
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 161 2e-37
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 160 2e-37
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 157 3e-36
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 156 6e-36
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 155 8e-36
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 155 1e-35
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 153 4e-35
ref|XP_002312652.1| RNA recognition motif-containing family prot... 153 5e-35
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 146 6e-33
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 143 4e-32
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 129 8e-28
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 113 6e-23
ref|XP_002315647.1| RNA recognition motif-containing family prot... 113 6e-23
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 186 bits (473), Expect = 4e-45
Identities = 108/215 (50%), Positives = 131/215 (60%), Gaps = 2/215 (0%)
Frame = +3
Query: 3 SALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSETVSVGGVGNGGLHAQRTEGTKSRAP 182
SALA++ELMGEDDEYDDLYNDVNVGEGFLQ+HRSE + GV GG +
Sbjct: 28 SALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAHKTDVPPQKL 87
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGE 362
E G S + IPGV +EGK S H K G M KG E S+ +SQ
Sbjct: 88 EAGTSQGLIIPGVSIEGKYSNPHF------HEKKEGPMAVKGPEMGSTSHLDGPSVSQKG 141
Query: 363 RLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMPN 542
R+ E+ DTQ N GF+G +P KTG +PS + GK + + + + G G R+ PQM +
Sbjct: 142 RVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLS 201
Query: 543 NQMGM--NVNRPMVNENLSRPSVENGTTMLFVGEL 641
NQMGM NVNRPMVNEN RP+V+NG TMLFVGEL
Sbjct: 202 NQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGEL 236
>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
Length = 491
Score = 186 bits (473), Expect = 4e-45
Identities = 108/215 (50%), Positives = 131/215 (60%), Gaps = 2/215 (0%)
Frame = +3
Query: 3 SALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSETVSVGGVGNGGLHAQRTEGTKSRAP 182
SALA++ELMGEDDEYDDLYNDVNVGEGFLQ+HRSE + GV GG +
Sbjct: 10 SALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAHKTDVPPQKL 69
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGE 362
E G S + IPGV +EGK S H K G M KG E S+ +SQ
Sbjct: 70 EAGTSQGLIIPGVSIEGKYSNPHF------HEKKEGPMAVKGPEMGSTSHLDGPSVSQKG 123
Query: 363 RLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMPN 542
R+ E+ DTQ N GF+G +P KTG +PS + GK + + + + G G R+ PQM +
Sbjct: 124 RVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLS 183
Query: 543 NQMGM--NVNRPMVNENLSRPSVENGTTMLFVGEL 641
NQMGM NVNRPMVNEN RP+V+NG TMLFVGEL
Sbjct: 184 NQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGEL 218
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 175 bits (444), Expect = 9e-42
Identities = 104/213 (48%), Positives = 130/213 (61%), Gaps = 1/213 (0%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSETV-SVGGVGNGGLHAQRTEGTKSRAP 182
ALA+EE+MGEDDEYDDLYNDVNVGEGFLQ+ RSE GG+G+ GL AQ+ E + R
Sbjct: 32 ALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPPQPGGMGSTGLQAQKNEAPEPRG- 90
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGE 362
E GGS + IPGV ++GK+ A D A P G SGT ISQ
Sbjct: 91 EAGGSQGLNIPGVSVQGKHLNVTARYPEQD-GQPAVSRPEMGSGSYPSGTS----ISQKG 145
Query: 363 RLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMPN 542
R+ E DTQ N GF+G ++ K G+DPS + K + + + G G + AP +P
Sbjct: 146 RVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVPQKIANVPAQSLNSGTGGPQGAPHVPP 205
Query: 543 NQMGMNVNRPMVNENLSRPSVENGTTMLFVGEL 641
NQMG+NVN PM++EN RP +ENG TMLFVGEL
Sbjct: 206 NQMGLNVNHPMISENQVRPPIENGPTMLFVGEL 238
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 168 bits (425), Expect = 1e-39
Identities = 100/215 (46%), Positives = 130/215 (60%), Gaps = 3/215 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALA+EE+MGEDDEYDDLYNDVNVGEGFLQ+ RSE + GG+G+ GL AQR E + R
Sbjct: 32 ALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPGGLGSTGLKAQRNEAPEPRV- 90
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSG--ISQ 356
E GGS + IPGV ++GK+ SA + + + + + GS Y SG ISQ
Sbjct: 91 EAGGSQGLNIPGVSVQGKHPN--VSARYPEKEEQPAVNRPEMVSGS-----YPSGSSISQ 143
Query: 357 GERLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQM 536
+ E D Q N GF+G + K G+DPS + K + + + G G + P +
Sbjct: 144 KGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGPPHV 203
Query: 537 PNNQMGMNVNRPMVNENLSRPSVENGTTMLFVGEL 641
P NQMG NVN P++NEN +P +ENG TMLFVGEL
Sbjct: 204 PPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGEL 238
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 168 bits (425), Expect = 1e-39
Identities = 100/215 (46%), Positives = 130/215 (60%), Gaps = 3/215 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALA+EE+MGEDDEYDDLYNDVNVGEGFLQ+ RSE + GG+G+ GL AQR E + R
Sbjct: 32 ALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPGGLGSTGLKAQRNEAPEPRV- 90
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSG--ISQ 356
E GGS + IPGV ++GK+ SA + + + + + GS Y SG ISQ
Sbjct: 91 EAGGSQGLNIPGVSVQGKHPN--VSARYPEKEEQPAVNRPEMVSGS-----YPSGSSISQ 143
Query: 357 GERLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQM 536
+ E D Q N GF+G + K G+DPS + K + + + G G + P +
Sbjct: 144 KGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGPPHV 203
Query: 537 PNNQMGMNVNRPMVNENLSRPSVENGTTMLFVGEL 641
P NQMG NVN P++NEN +P +ENG TMLFVGEL
Sbjct: 204 PPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGEL 238
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 168 bits (425), Expect = 1e-39
Identities = 100/215 (46%), Positives = 130/215 (60%), Gaps = 3/215 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALA+EE+MGEDDEYDDLYNDVNVGEGFLQ+ RSE + GG+G+ GL AQR E + R
Sbjct: 32 ALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPGGLGSTGLKAQRNEAPEPRV- 90
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSG--ISQ 356
E GGS + IPGV ++GK+ SA + + + + + GS Y SG ISQ
Sbjct: 91 EAGGSQGLNIPGVSVQGKHPN--VSARYPEKEEQPAVNRPEMVSGS-----YPSGSSISQ 143
Query: 357 GERLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQM 536
+ E D Q N GF+G + K G+DPS + K + + + G G + P +
Sbjct: 144 KGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGPPHV 203
Query: 537 PNNQMGMNVNRPMVNENLSRPSVENGTTMLFVGEL 641
P NQMG NVN P++NEN +P +ENG TMLFVGEL
Sbjct: 204 PPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGEL 238
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 168 bits (425), Expect = 1e-39
Identities = 100/215 (46%), Positives = 130/215 (60%), Gaps = 3/215 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALA+EE+MGEDDEYDDLYNDVNVGEGFLQ+ RSE + GG+G+ GL AQR E + R
Sbjct: 32 ALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPGGLGSTGLKAQRNEAPEPRV- 90
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSG--ISQ 356
E GGS + IPGV ++GK+ SA + + + + + GS Y SG ISQ
Sbjct: 91 EAGGSQGLNIPGVSVQGKHPN--VSARYPEKEEQPAVNRPEMVSGS-----YPSGSSISQ 143
Query: 357 GERLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQM 536
+ E D Q N GF+G + K G+DPS + K + + + G G + P +
Sbjct: 144 KGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGPPHV 203
Query: 537 PNNQMGMNVNRPMVNENLSRPSVENGTTMLFVGEL 641
P NQMG NVN P++NEN +P +ENG TMLFVGEL
Sbjct: 204 PPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGEL 238
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 161 bits (407), Expect = 2e-37
Identities = 99/215 (46%), Positives = 128/215 (59%), Gaps = 3/215 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALA+EELMGEDDEYDDLYNDVNVG+G LQ + E GVGNG L ++T+ + R
Sbjct: 29 ALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGRLQVKKTDVPEQRV- 87
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGE 362
+ GGS IPGV +EGK + +G+ + A P G G + +SQ
Sbjct: 88 QVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQVAVNRPNMGSGNYPDG----ASVSQKG 143
Query: 363 RLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMPN 542
+ E D N GF+G + P++TGVDPS M G+ + + + +PG AG + A +P
Sbjct: 144 SVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRVANEPAPVLNPGAAGPQGA-LIPA 202
Query: 543 NQMGM--NVNRPMVNENLSRPSVENGTTMLFVGEL 641
NQMG+ NVNR MVNEN RP +ENG TMLFVGEL
Sbjct: 203 NQMGVNANVNRVMVNENQIRPPLENGGTMLFVGEL 237
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 160 bits (406), Expect = 2e-37
Identities = 98/215 (45%), Positives = 128/215 (59%), Gaps = 3/215 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALA+EELMGEDDEYDDLYND+NVG+G LQ + E GVGNG L ++T+ + R
Sbjct: 29 ALADEELMGEDDEYDDLYNDINVGDGLLQFQQPEAPPPSAGVGNGRLQVKKTDVPEQRV- 87
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGE 362
+ GGS IPGV +EGK + +G+ + A P G G + +SQ
Sbjct: 88 QVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQVAVNRPNMGSGNYPDG----ASVSQKG 143
Query: 363 RLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMPN 542
+ E D N GF+G + P++TGVDPS M G+ + + + +PG AG + A +P
Sbjct: 144 SVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRAANEPAPVLNPGAAGPQGA-LIPA 202
Query: 543 NQMGM--NVNRPMVNENLSRPSVENGTTMLFVGEL 641
NQMG+ NVNR MVNEN RP +ENG TMLFVGEL
Sbjct: 203 NQMGVNANVNRVMVNENQIRPPLENGGTMLFVGEL 237
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein,
putative [Ricinus communis]
Length = 644
Score = 157 bits (397), Expect = 3e-36
Identities = 101/218 (46%), Positives = 129/218 (59%), Gaps = 6/218 (2%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSETVSVG-GVGNGGLHAQRTEGTKSRAP 182
ALAEEE MGEDDEYDDLYNDVN+GE FLQ+HRSE VGNGG + + +
Sbjct: 29 ALAEEE-MGEDDEYDDLYNDVNIGENFLQMHRSEAPPAPPSVGNGGFQPRNSNDLRV--- 84
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGT-GYQSG--IS 353
E GGS + IPGV +E K S G H P + ++G G+ GY G I+
Sbjct: 85 ESGGSQGLNIPGVAVESKYST-------GTH------FPEQNVKGPEIGSVGYPDGSSIA 131
Query: 354 QGERLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQ 533
Q R+ E+ D+QA N GF+G + P+ GVDPS M+ K S + +P+ G R PQ
Sbjct: 132 QKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPTPVPNAGVP--RVIPQ 189
Query: 534 MPNNQMGMNV--NRPMVNENLSRPSVENGTTMLFVGEL 641
+P +QM MN+ NR NEN RP +ENG+TML+VGEL
Sbjct: 190 LPASQMNMNMDTNRSATNENQIRPPLENGSTMLYVGEL 227
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 156 bits (394), Expect = 6e-36
Identities = 96/215 (44%), Positives = 126/215 (58%), Gaps = 3/215 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALA+EELMGEDDEYDDLYNDVNVG+G LQ + E GVGNG L ++T+ + +
Sbjct: 32 ALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGRLQVKKTDVPEQQV- 90
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGE 362
+ G S +PGV +EGK + +G + A P G G + +SQ
Sbjct: 91 QAGVSQGSNVPGVSVEGKYTNAGTHFPAQNDVQVAVNRPNMGSGNYPDG----ASVSQKG 146
Query: 363 RLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMPN 542
+ E D N GF+G + P++TGVDPS M G+ + + + +PG AG + A +P
Sbjct: 147 SVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRVANEPAPVLNPGAAGPQGA-LIPA 205
Query: 543 NQMG--MNVNRPMVNENLSRPSVENGTTMLFVGEL 641
NQMG +NVNR MVNEN RP +ENG TMLFVGEL
Sbjct: 206 NQMGVNINVNRAMVNENQIRPPLENGGTMLFVGEL 240
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 155 bits (393), Expect = 8e-36
Identities = 103/218 (47%), Positives = 129/218 (59%), Gaps = 5/218 (2%)
Frame = +3
Query: 3 SALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRA 179
SALA+EE M EDDEYDDLYNDVNV EGFLQ+HRSE + GGVGNGGL AQ+T+ T++R
Sbjct: 28 SALADEEPMVEDDEYDDLYNDVNVREGFLQMHRSEAPLPPGGVGNGGLQAQKTDVTETRV 87
Query: 180 PEHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQG 359
+ G S E IPGV ++GK S A A F + QG
Sbjct: 88 -QAGVSQESKIPGVSVQGK--YSSAVAQFPE--------------------------QQG 118
Query: 360 ERLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLP--DPGPAGVRSAPQ 533
+ P +A + + G+ G+ G T+P G D S ++GK + L S+P + G AG Q
Sbjct: 119 Q--PPVAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTA--LESVPSMNSGTAGPTGVTQ 173
Query: 534 MPNNQMG--MNVNRPMVNENLSRPSVENGTTMLFVGEL 641
MP NQ+ +N NRPM NEN RP VENG+TMLFVGEL
Sbjct: 174 MPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGEL 211
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 155 bits (392), Expect = 1e-35
Identities = 96/215 (44%), Positives = 125/215 (58%), Gaps = 3/215 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALA+EELMGEDDEYDDLYNDVNVG+G LQ + E GVGNG L ++T+ + +
Sbjct: 32 ALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGRLQVKKTDVPEQQV- 90
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGE 362
+ G S +PGV +EGK + +G + A P G G + +SQ
Sbjct: 91 QAGVSQGSNVPGVSVEGKYTNAGTHFPAQNDVQVAVNRPNMGSGNYPDG----ASVSQKG 146
Query: 363 RLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMPN 542
+ E D N GF+G + P +TGVDPS M G+ + + + +PG AG + A +P
Sbjct: 147 SVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMPGRVANEPAPVLNPGAAGPQGA-LIPA 205
Query: 543 NQMG--MNVNRPMVNENLSRPSVENGTTMLFVGEL 641
NQMG +NVNR MVNEN RP +ENG TMLFVGEL
Sbjct: 206 NQMGVNINVNRAMVNENQIRPPLENGGTMLFVGEL 240
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 153 bits (387), Expect = 4e-35
Identities = 99/215 (46%), Positives = 118/215 (54%), Gaps = 3/215 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALA+EE M EDDEYDDLYNDVNVGEGFLQ+HR E + GVGNGGL AQ+ + R
Sbjct: 32 ALADEEPMVEDDEYDDLYNDVNVGEGFLQMHRPEPPLPPAGVGNGGLQAQKNNVPEQRV- 90
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGE 362
+ G S EV PG +EGK S S +P SQ
Sbjct: 91 QGGASQEVKNPGFSVEGKYS----SVPEQKDQPPVSVVPEMA--------------SQKG 132
Query: 363 RLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMPN 542
R+ E+ D Q N GF+G AT+ + D S ++GK + G + G G + QMP
Sbjct: 133 RVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGPIPSMNSGSNGPPAVQQMPA 192
Query: 543 NQMGM--NVNRPMVNENLSRPSVENGTTMLFVGEL 641
NQM M NVNRPMVNEN RP VENG+ LFVGEL
Sbjct: 193 NQMNMKINVNRPMVNENQIRPPVENGSATLFVGEL 227
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 153 bits (386), Expect = 5e-35
Identities = 101/215 (46%), Positives = 120/215 (55%), Gaps = 3/215 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALAEEE MGEDDEYDDLYNDVNVGE FLQ+H SE VGNGG +T
Sbjct: 19 ALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVGNGGF---QTRNAHESRI 74
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGE 362
E GGS + I G G + S A A F + A +E G S ++Q
Sbjct: 75 ETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVA-----VAVEAQDVGPVDGSSVAQKG 129
Query: 363 RLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMPN 542
R+ E++ D Q N GF+ +P GVDPS MS K + LP G AG R APQM
Sbjct: 130 RVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLPITGSAGPRGAPQMQV 189
Query: 543 NQMGM--NVNRPMVNENLSRPSVENGTTMLFVGEL 641
NQM M +VNRP+VNEN RP +ENG+T L+VGEL
Sbjct: 190 NQMHMSADVNRPVVNENQVRPPIENGSTTLYVGEL 224
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 146 bits (368), Expect = 6e-33
Identities = 98/221 (44%), Positives = 120/221 (54%), Gaps = 8/221 (3%)
Frame = +3
Query: 3 SALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSETVSV---GGVGNGGLHAQRTEGTKS 173
SALA+EELMG+DDEYDDLYNDVNVGEGFLQ+ RSE S+ GVGN GL AQ+ +
Sbjct: 29 SALADEELMGDDDEYDDLYNDVNVGEGFLQLQRSEAPSLPAAAGVGN-GLQAQKRNFPEP 87
Query: 174 RAPEHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGIS 353
R E GGS + IPGV EG+ S +G+ G G
Sbjct: 88 R-EEIGGSQQPNIPGVSAEGRFSSAGSQ-----------------FPGQQDGLKVDKKSE 129
Query: 354 QGERL-PEIAPDTQAGN--EGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRS 524
G + P+ A +Q G GF+G + GVD S + GK P+ G AG R
Sbjct: 130 AGSMVYPDGASGSQKGRIVAGFQGSKPMLHSVGVDSSDIPGKMVNEPIQAPNSGGAGPRG 189
Query: 525 APQMPNNQ--MGMNVNRPMVNENLSRPSVENGTTMLFVGEL 641
M NQ + NV+ P+VNEN RPS+ENG+TMLFVGEL
Sbjct: 190 ILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGEL 230
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 143 bits (361), Expect = 4e-32
Identities = 94/219 (42%), Positives = 118/219 (53%), Gaps = 7/219 (3%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALAE+E+MGEDDEYDDLYNDVN+GEGFLQ+ RSE V GNG AQ+ SRA
Sbjct: 32 ALAEDEMMGEDDEYDDLYNDVNIGEGFLQLQRSEVPVPSVDAGNGNFQAQKDSFPASRAG 91
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGE 362
GS E IPG+ EGK +G F KG T + +Q
Sbjct: 92 GL-GSEEAKIPGIATEGK--YAGTEVQFPQQ---------KGEPVVERETERPADAAQKA 139
Query: 363 RLPEIAP--DTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQM 536
R I ++QAGN G++G +P K G DP M K + + L + G R P M
Sbjct: 140 RPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNASEATPLMNSVVPGPRVVPHM 199
Query: 537 PNNQM----GMNVNRPMVNENLSRPSVENGTTMLFVGEL 641
P NQ+ +N+N P+++E RPS+ENG TMLFVGEL
Sbjct: 200 PTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGEL 238
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 129 bits (324), Expect = 8e-28
Identities = 87/219 (39%), Positives = 114/219 (52%), Gaps = 7/219 (3%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSETVSVGGVGNGGLHAQRTEGTKSRAPE 185
ALAE+E++G+DDEYDDLYNDVNVGEGF+Q+ RSE VGN + +RA E
Sbjct: 32 ALAEDEMIGDDDEYDDLYNDVNVGEGFMQMQRSEAPPPSAVGNNSFSISKNTAPGTRA-E 90
Query: 186 HGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGTGYQSGISQGER 365
S EV VG EG + +G S +N A P + ++ SQ R
Sbjct: 91 AIASQEVNNGRVGNEGSYAPNGVQLSDQKNNLTAVGGPAQPVDA-----------SQRVR 139
Query: 366 LPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMPNN 545
LPE+A +QA + G++G + KT D S G +SL P + PQ P+N
Sbjct: 140 LPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEPASLVYPNTGSSKGVPQAPSN 199
Query: 546 QM------GMNVNRPMVNENLSRPS-VENGTTMLFVGEL 641
M +NVNR M +E L RPS ENG M++VGEL
Sbjct: 200 LMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGEL 238
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 113 bits (282), Expect = 6e-23
Identities = 85/216 (39%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALAEEEL GEDDEYDDLYNDVNVGE FLQ+H SE GNGG +T
Sbjct: 19 ALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAGNGGF---QTRNAHESRV 74
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGT-GYQSGISQG 359
E GGS + G G+ + S A A F + G G+E + G+ GY G
Sbjct: 75 ETGGSQVLATSGAGVAVEGKYSNAGAHFPEQK-----QAGIGVEANDVGSIGYGDG---- 125
Query: 360 ERLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMP 539
SS+ G AG R PQM
Sbjct: 126 ------------------------------------------SSVAQKGSAGPRGVPQMQ 143
Query: 540 NNQMGMN--VNRPMVNENLSRPSVENGTTMLFVGEL 641
NQM MN VNRP+VNEN RP +ENG T L+VGEL
Sbjct: 144 VNQMNMNADVNRPVVNENQVRPPIENGPTTLYVGEL 179
>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222864687|gb|EEF01818.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 573
Score = 113 bits (282), Expect = 6e-23
Identities = 85/216 (39%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
Frame = +3
Query: 6 ALAEEELMGEDDEYDDLYNDVNVGEGFLQVHRSET-VSVGGVGNGGLHAQRTEGTKSRAP 182
ALAEEEL GEDDEYDDLYNDVNVGE FLQ+H SE GNGG +T
Sbjct: 19 ALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAGNGGF---QTRNAHESRV 74
Query: 183 EHGGSLEVTIPGVGMEGKNSKSGASASFGDHNNKAGYMPGKGLEGSSSGT-GYQSGISQG 359
E GGS + G G+ + S A A F + G G+E + G+ GY G
Sbjct: 75 ETGGSQVLATSGAGVAVEGKYSNAGAHFPEQK-----QAGIGVEANDVGSIGYGDG---- 125
Query: 360 ERLPEIAPDTQAGNEGFRGPATLPAKTGVDPSQMSGKFSGGLSSLPDPGPAGVRSAPQMP 539
SS+ G AG R PQM
Sbjct: 126 ------------------------------------------SSVAQKGSAGPRGVPQMQ 143
Query: 540 NNQMGMN--VNRPMVNENLSRPSVENGTTMLFVGEL 641
NQM MN VNRP+VNEN RP +ENG T L+VGEL
Sbjct: 144 VNQMNMNADVNRPVVNENQVRPPIENGPTTLYVGEL 179