BLASTX nr result
ID: Sinomenium21_contig00016723
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00016723
(1682 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004303683.1| PREDICTED: uncharacterized protein LOC101296... 114 1e-22
gb|ADL36631.1| C2H2L domain class transcription factor [Malus do... 112 7e-22
gb|EXC04958.1| Transcription initiation factor TFIID subunit 12 ... 107 1e-20
ref|XP_007216979.1| hypothetical protein PRUPE_ppa002765mg [Prun... 107 1e-20
ref|XP_004167884.1| PREDICTED: uncharacterized protein LOC101227... 103 3e-19
ref|XP_004141812.1| PREDICTED: uncharacterized protein LOC101211... 103 3e-19
ref|XP_002299594.1| transcription initiation factor IID subunit ... 100 2e-18
ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248... 100 3e-18
ref|XP_006306911.1| hypothetical protein CARUB_v10008470mg [Caps... 98 1e-17
ref|XP_002304140.1| transcription initiation factor IID subunit ... 97 2e-17
ref|XP_002892951.1| hypothetical protein ARALYDRAFT_471949 [Arab... 96 5e-17
ref|XP_003528481.1| PREDICTED: transcription initiation factor T... 96 6e-17
gb|AAF97312.1|AC007843_15 Unknown protein [Arabidopsis thaliana] 95 8e-17
ref|NP_564023.1| transcription initiation factor TFIID subunit 1... 95 8e-17
ref|XP_006416703.1| hypothetical protein EUTSA_v10006997mg [Eutr... 94 1e-16
ref|XP_007024610.1| Transcription initiation factor TFIID subuni... 93 4e-16
ref|XP_007024609.1| Transcription initiation factor TFIID subuni... 93 4e-16
ref|XP_007024608.1| Transcription initiation factor TFIID subuni... 93 4e-16
ref|XP_007024607.1| Transcription initiation factor TFIID subuni... 93 4e-16
sp|B2C6R6.1|TAFCL_ARATH RecName: Full=Transcription initiation f... 92 5e-16
>ref|XP_004303683.1| PREDICTED: uncharacterized protein LOC101296405 [Fragaria vesca
subsp. vesca]
Length = 629
Score = 114 bits (285), Expect = 1e-22
Identities = 129/408 (31%), Positives = 160/408 (39%), Gaps = 21/408 (5%)
Frame = -1
Query: 1577 MADN-SSSSPKPIQ-------SANAVDXXXXXXXXXXXXXPASISTSPPMDIPQITSPQI 1422
MA+N SS S KP+Q A+ S +++P + PQI+SP +
Sbjct: 1 MAENVSSPSQKPLQPPNPNSIEASTAAASPNIIITQNQNPSNSAASNPAIPSPQISSPPL 60
Query: 1421 PIGQNAPSVXXXXXXXXXXXXXXQMINPTVGLDYXXXXXXXXXXXXXXXXXXXXXXXXXX 1242
P PS+ +++PTVGLDY
Sbjct: 61 P---PLPSISLPQNQQ--------LLSPTVGLDYTQKPNPQSQPLVQQQ----------- 98
Query: 1241 XXXXQNMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXM-SF 1065
N++S NFQ+Q S+QRSPS+SRLN Q SF
Sbjct: 99 -----NVMS--NFQLQQSMQRSPSMSRLNQIQQQNQSQQQQHFGMMRQQQANLYGQQVSF 151
Query: 1064 GGS-------HLXXXXXXXXXXQMATGGLSRSALMGQGAHLPMLPGQTA---QFNLQSQL 915
GGS Q+ G LSR+AL+ Q LPML G A QFN+Q QL
Sbjct: 152 GGSGGIQQSNQQQQQNQTQQQQQIGGGSLSRAALLSQSGQLPMLSGAAATAAQFNMQPQL 211
Query: 914 LGPAVRQKAALVQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXL--RANGSLPYAXXXX 741
L + RQK+ LVQG+QF N+PGQ+L RANG+L YA
Sbjct: 212 LA-SPRQKSGLVQGTQF---NSPGQSLQGTQAMGMGMMGSINLTSQLRANGALAYAQQRL 267
Query: 740 XXXXXXXXXXXXXXXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXXXXXX 561
Q L QNL RT SLA MNPQLSGL QNG
Sbjct: 268 NQGGQLRQQLSQQSSLASPQVLHLQNLPRTSSLAFMNPQLSGLAQNG-----QPAMMQNS 322
Query: 560 XXXXXXXXQPGISGPGSPYHXXXXXXXXXXXXXXXXLASSTQMHPKSM 417
P ISGPGSP + LASSTQ+H KS+
Sbjct: 323 LSQQWLKQMPAISGPGSPSY--RLQQQRQQAIFQQQLASSTQLHQKSL 368
Score = 77.0 bits (188), Expect = 2e-11
Identities = 48/88 (54%), Positives = 52/88 (59%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
R+P QKSLSL TEA+NQLLGKRK+QDLVSQVDS+GR
Sbjct: 432 RMPVPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKMQDLVSQVDSQGR 491
Query: 86 XXXXXXXXXXEIADDFIDSVTTFACSLA 3
EIADDFIDSVTTFACSLA
Sbjct: 492 LDSEVEDLLLEIADDFIDSVTTFACSLA 519
>gb|ADL36631.1| C2H2L domain class transcription factor [Malus domestica]
Length = 630
Score = 112 bits (279), Expect = 7e-22
Identities = 115/372 (30%), Positives = 144/372 (38%), Gaps = 15/372 (4%)
Frame = -1
Query: 1577 MADNS-SSSPKPIQ-SANAVDXXXXXXXXXXXXXPASISTSPPMDIPQITSPQIPIGQNA 1404
MA+N SSSP P+Q + + PA +S+S PQI SP +P
Sbjct: 1 MAENGPSSSPNPLQPNIDPAAAVASPSNVMITQNPAILSSSTLSQSPQIASPPLP---PL 57
Query: 1403 PSVXXXXXXXXXXXXXXQMINPTVGLDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQN 1224
P+V I+P VGLDY N
Sbjct: 58 PNVSLPQTQH---------ISPPVGLDYAQKSTQQQQQLQQQSQSLVQQSQNV------N 102
Query: 1223 MISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXM-SFGG---- 1059
+ S N+Q+Q SLQR+PS+SR+N +FGG
Sbjct: 103 VNSMSNYQLQQSLQRTPSMSRMNQLQPLSQNPQQQQQHFGMMRQQGGLYGQVNFGGPGGI 162
Query: 1058 ----SHLXXXXXXXXXXQMATGGLSRSALMGQGAHLPMLPGQTA----QFNLQSQLLGPA 903
Q+ G LSRSAL+GQ HLPML G A QFNLQ QLL +
Sbjct: 163 QQQNQQQQQQNQAQQTQQLGGGNLSRSALIGQSGHLPMLSGPAAVAAAQFNLQPQLLA-S 221
Query: 902 VRQKAALVQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXX 723
RQK +LVQGSQFH GN+PGQ+L LRANG++ +
Sbjct: 222 PRQKGSLVQGSQFHHGNSPGQSLQGTQAMGVMGSINLSSQLRANGAIA-SFAQQRINQGQ 280
Query: 722 XXXXXXXXXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXXXXXXXXXXXX 543
Q Q+L RT SL+ MNPQLSG++QNG
Sbjct: 281 GQLRQQLAQQSPLTSAQVQSLPRTSSLSFMNPQLSGVSQNG-----QPAMIQNSLSQQWL 335
Query: 542 XXQPGISGPGSP 507
P GPGSP
Sbjct: 336 KQMPASPGPGSP 347
Score = 73.6 bits (179), Expect = 3e-10
Identities = 45/81 (55%), Positives = 49/81 (60%)
Frame = -1
Query: 245 QKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGRXXXXXXX 66
QKSLSL TEA+NQLLGKRKIQDLVSQVDS+GR
Sbjct: 440 QKSLSLTGSHPDAAASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGRLDPEVED 499
Query: 65 XXXEIADDFIDSVTTFACSLA 3
EIADDFIDSVTT+AC+LA
Sbjct: 500 LLLEIADDFIDSVTTYACNLA 520
>gb|EXC04958.1| Transcription initiation factor TFIID subunit 12 [Morus notabilis]
Length = 641
Score = 107 bits (268), Expect = 1e-20
Identities = 124/410 (30%), Positives = 155/410 (37%), Gaps = 23/410 (5%)
Frame = -1
Query: 1577 MADNSSSSPKPIQSANAVDXXXXXXXXXXXXXPASISTSPPMDIPQITSPQIPIGQNAPS 1398
MA+N+ SSPKP+Q+ N A+++ + +PQIP +PS
Sbjct: 1 MAENAVSSPKPLQTPNPNGDPNTNTTTATPSTTANVTNNAMNLQNSSMNPQIP----SPS 56
Query: 1397 VXXXXXXXXXXXXXXQMINPTVGLDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNMI 1218
I P VGLDY +
Sbjct: 57 ALSQSPQISSPPLPQ-QIPPAVGLDYQQSKQSQPLVQQTSQNVN---------------L 100
Query: 1217 SQKNFQIQPSLQRSPSISRLNXXXXXXXXQ-PXXXXXXXXXXXXXXXXXMSFGGSHLXXX 1041
S N+Q+Q LQRSPS+SR+N Q P M+FGGS +
Sbjct: 101 SMSNYQLQQCLQRSPSMSRMNQIQQQQQPQSPQHMGVNVMRQQAGLYGQMNFGGSPVIQQ 160
Query: 1040 XXXXXXXQ--------------------MATGGLSRSALMGQGAHLPMLPGQTA-QFNLQ 924
Q A LSRSAL+GQ HLP+L A QFNLQ
Sbjct: 161 QSNQQPQQPQQQQNQQQQQQQNNQISAAAAAANLSRSALIGQSGHLPVLSSAAAVQFNLQ 220
Query: 923 SQLLGPAVRQKAALVQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSL-PYAXX 747
+QLL + R KAALVQGSQFH GN+ GQTL +R+NG+L YA
Sbjct: 221 NQLL-TSPRHKAALVQGSQFHPGNSAGQTLQ---GMQAMGMLGLSSQIRSNGALASYA-- 274
Query: 746 XXXXXXXXXXXXXXXXXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXXXX 567
Q Q+L RT SLA +NPQLSGL+QNG
Sbjct: 275 --QQRINQGQLRQQLSQQNALNSSQVQSLPRTSSLAYLNPQLSGLSQNG-----QPAMMQ 327
Query: 566 XXXXXXXXXXQPGISGPGSPYHXXXXXXXXXXXXXXXXLASSTQMHPKSM 417
P ISGPGSP LASS+Q+H S+
Sbjct: 328 NSLSQQWLKQMPSISGPGSP-SFRLQQQRQQQVLLQQQLASSSQLHQSSI 376
Score = 73.6 bits (179), Expect = 3e-10
Identities = 46/88 (52%), Positives = 51/88 (57%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
R+ + QKSLSL TEA+NQLLGKRKIQDLVSQVDS+G+
Sbjct: 444 RVHGPSGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGK 503
Query: 86 XXXXXXXXXXEIADDFIDSVTTFACSLA 3
EIADDFIDSVT FACSLA
Sbjct: 504 LDPEVEDLLLEIADDFIDSVTAFACSLA 531
>ref|XP_007216979.1| hypothetical protein PRUPE_ppa002765mg [Prunus persica]
gi|462413129|gb|EMJ18178.1| hypothetical protein
PRUPE_ppa002765mg [Prunus persica]
Length = 635
Score = 107 bits (268), Expect = 1e-20
Identities = 116/377 (30%), Positives = 142/377 (37%), Gaps = 25/377 (6%)
Frame = -1
Query: 1562 SSSPKPIQSAN--AVDXXXXXXXXXXXXXP----ASISTSPPM-------DIPQITSPQI 1422
SSSPKP+Q +N ++D ++ S +PP+ PQI+SP +
Sbjct: 7 SSSPKPLQPSNPNSIDPTAASTAAATNIIINQNPSNSSANPPIPSPSALAQSPQISSPPL 66
Query: 1421 PIGQNAPSVXXXXXXXXXXXXXXQMINPTVGLDYXXXXXXXXXXXXXXXXXXXXXXXXXX 1242
P N Q I PTVGLDY
Sbjct: 67 PPLSNIS------------LPQNQHITPTVGLDYTQKLNQQQQQQQSQSLVQQSQNV--- 111
Query: 1241 XXXXQNMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXMSFG 1062
N+ S N+Q+Q +LQRS S+SR+N Q ++FG
Sbjct: 112 -----NVNSMSNYQLQQTLQRSTSMSRVNQLQQQTQNQQQQQHFGMMRQQGGSYPQVNFG 166
Query: 1061 GSHL--------XXXXXXXXXXQMATGGLSRSALMGQGAHLPMLPG----QTAQFNLQSQ 918
GS Q+ G LSRSALM Q HLPML AQFNLQ Q
Sbjct: 167 GSGAIQQQNQLQQQNQPQQSQQQIGGGNLSRSALMAQSGHLPMLSSAAAVAAAQFNLQPQ 226
Query: 917 LLGPAVRQKAALVQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXX 738
+L + RQK LVQGSQFH GN+P Q+L LRANG+L
Sbjct: 227 MLA-SPRQKGGLVQGSQFHAGNSPAQSLQGTQAMGMMGSINLSSQLRANGAL---ASFAQ 282
Query: 737 XXXXXXXXXXXXXXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXXXXXXX 558
Q Q+L RT SLA MNPQ SG+TQNG
Sbjct: 283 QRMNSGQLRQQLAQQSSLTSAQVQSLPRTPSLAFMNPQPSGMTQNG-----QPAMVQNSL 337
Query: 557 XXXXXXXQPGISGPGSP 507
P ISG GSP
Sbjct: 338 SQQWFKQMPTISGTGSP 354
Score = 73.2 bits (178), Expect = 3e-10
Identities = 44/81 (54%), Positives = 49/81 (60%)
Frame = -1
Query: 245 QKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGRXXXXXXX 66
QKSLSL TEA+NQLLGKRKIQDLVSQ+DS+GR
Sbjct: 446 QKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQIDSQGRLDPEVED 505
Query: 65 XXXEIADDFIDSVTTFACSLA 3
EIADDFIDSVTT+AC+LA
Sbjct: 506 LLLEIADDFIDSVTTYACNLA 526
>ref|XP_004167884.1| PREDICTED: uncharacterized protein LOC101227692 [Cucumis sativus]
Length = 668
Score = 103 bits (256), Expect = 3e-19
Identities = 125/412 (30%), Positives = 154/412 (37%), Gaps = 25/412 (6%)
Frame = -1
Query: 1577 MADNSSSSPKPIQSANAVDXXXXXXXXXXXXXPASI------------STSPPMDIPQ-- 1440
MAD S+SSP+P+Q N +D P++ S +PP+ P
Sbjct: 1 MAD-STSSPRPVQP-NPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSAL 58
Query: 1439 ITSPQI----PIGQ-NAPSVXXXXXXXXXXXXXXQMINPTVGLDYXXXXXXXXXXXXXXX 1275
+ SP I P+ Q ++P + Q ++P VGLDY
Sbjct: 59 VQSPSIDHLHPLAQISSPPLSHISLPQNQQQQPQQQLSPAVGLDYQQKPIQQQQQQQQQQ 118
Query: 1274 XXXXXXXXXXXXXXXQNMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXX 1095
N + NFQIQ +LQRSPSISRLN Q
Sbjct: 119 QQQQQQLVQQPQ----NASAMTNFQIQQALQRSPSISRLNQMQPQQQQQQQQQFGMMRQQ 174
Query: 1094 XXXXXXXMSFGGSHLXXXXXXXXXXQ-----MATGGLSRSALMGQGAHLPMLPGQTAQFN 930
+FGG+ M TG LSRS L+GQG HLPML G AQ+N
Sbjct: 175 SGLYSQM-NFGGASTNQQQQQQQQQPNQQQQMGTGNLSRSTLIGQGNHLPMLSG-AAQYN 232
Query: 929 LQSQLLGPAVRQKAALVQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANG-SLPYA 753
L SQLL + +QKA LVQG QF N+ GQ L LRANG + PYA
Sbjct: 233 LPSQLLASS-KQKAGLVQGPQFQSSNSHGQALQGIQAMGMMGSMNLPSQLRANGLASPYA 291
Query: 752 XXXXXXXXXXXXXXXXXXXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXX 573
Q QNL R +LA MN QL+ L QNG
Sbjct: 292 QQRINQGQIRQQLSQQSSLTSP----QVQNLPRMSNLAFMNQQLTNLAQNG----QPTMM 343
Query: 572 XXXXXXXXXXXXQPGISGPGSPYHXXXXXXXXXXXXXXXXLASSTQMHPKSM 417
P +S PGSP LASS Q+H SM
Sbjct: 344 QNSLQQQQWLKQMPSMSNPGSP----SFRLQRQQVLLHQQLASSNQLHQNSM 391
Score = 67.4 bits (163), Expect = 2e-08
Identities = 43/88 (48%), Positives = 48/88 (54%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
RI QKSLSL TEA+ Q+LGKRKIQDLVSQVD G+
Sbjct: 469 RIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGK 528
Query: 86 XXXXXXXXXXEIADDFIDSVTTFACSLA 3
EIADDFIDSVTTF+C+LA
Sbjct: 529 LEPEVEDLLLEIADDFIDSVTTFSCNLA 556
>ref|XP_004141812.1| PREDICTED: uncharacterized protein LOC101211341 [Cucumis sativus]
Length = 656
Score = 103 bits (256), Expect = 3e-19
Identities = 125/412 (30%), Positives = 154/412 (37%), Gaps = 25/412 (6%)
Frame = -1
Query: 1577 MADNSSSSPKPIQSANAVDXXXXXXXXXXXXXPASI------------STSPPMDIPQ-- 1440
MAD S+SSP+P+Q N +D P++ S +PP+ P
Sbjct: 1 MAD-STSSPRPVQP-NPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSAL 58
Query: 1439 ITSPQI----PIGQ-NAPSVXXXXXXXXXXXXXXQMINPTVGLDYXXXXXXXXXXXXXXX 1275
+ SP I P+ Q ++P + Q ++P VGLDY
Sbjct: 59 VQSPSIDHLHPLAQISSPPLSHISLPQNQQQQPQQQLSPAVGLDYQQKPIQQQQQQQQQQ 118
Query: 1274 XXXXXXXXXXXXXXXQNMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXX 1095
N + NFQIQ +LQRSPSISRLN Q
Sbjct: 119 QQQQQQLVQQPQ----NASAMTNFQIQQALQRSPSISRLNQMQPQQQQQQQQQFGMMRQQ 174
Query: 1094 XXXXXXXMSFGGSHLXXXXXXXXXXQ-----MATGGLSRSALMGQGAHLPMLPGQTAQFN 930
+FGG+ M TG LSRS L+GQG HLPML G AQ+N
Sbjct: 175 SGLYSQM-NFGGASTNQQQQQQQQQPNQQQQMGTGNLSRSTLIGQGNHLPMLSG-AAQYN 232
Query: 929 LQSQLLGPAVRQKAALVQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANG-SLPYA 753
L SQLL + +QKA LVQG QF N+ GQ L LRANG + PYA
Sbjct: 233 LPSQLLASS-KQKAGLVQGPQFQSSNSHGQALQGIQAMGMMGSMNLPSQLRANGLASPYA 291
Query: 752 XXXXXXXXXXXXXXXXXXXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXX 573
Q QNL R +LA MN QL+ L QNG
Sbjct: 292 QQRINQGQIRQQLSQQSSLTSP----QVQNLPRMSNLAFMNQQLTNLAQNG----QPTMM 343
Query: 572 XXXXXXXXXXXXQPGISGPGSPYHXXXXXXXXXXXXXXXXLASSTQMHPKSM 417
P +S PGSP LASS Q+H SM
Sbjct: 344 QNSLQQQQWLKQMPSMSNPGSP----SFRLQRQQVLLHQQLASSNQLHQNSM 391
Score = 67.4 bits (163), Expect = 2e-08
Identities = 43/88 (48%), Positives = 48/88 (54%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
RI QKSLSL TEA+ Q+LGKRKIQDLVSQVD G+
Sbjct: 469 RIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGK 528
Query: 86 XXXXXXXXXXEIADDFIDSVTTFACSLA 3
EIADDFIDSVTTF+C+LA
Sbjct: 529 LEPEVEDLLLEIADDFIDSVTTFSCNLA 556
>ref|XP_002299594.1| transcription initiation factor IID subunit A family protein [Populus
trichocarpa] gi|222846852|gb|EEE84399.1| transcription
initiation factor IID subunit A family protein [Populus
trichocarpa]
Length = 656
Score = 100 bits (250), Expect = 2e-18
Identities = 81/212 (38%), Positives = 98/212 (46%), Gaps = 4/212 (1%)
Frame = -1
Query: 1226 NMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQ-PXXXXXXXXXXXXXXXXXMSFGGSHL 1050
N+ + +QIQ +LQRSPS+SRL+ Q M+FGGS
Sbjct: 80 NVTAMSGYQIQQTLQRSPSMSRLSQINQQQPNQYGGVLRQQQQQQQQGLYGQMNFGGS-A 138
Query: 1049 XXXXXXXXXXQMATGGLSRSALMGQGAHLPMLPGQTA---QFNLQSQLLGPAVRQKAALV 879
Q+ SRSAL+GQ HLPML G A Q NL SQLL + RQKA LV
Sbjct: 139 SIQPNSQQNQQLGGANSSRSALLGQTGHLPMLTGTAAAAAQLNLPSQLLA-SPRQKAGLV 197
Query: 878 QGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXXXXXXXXXX 699
QGSQFH GN+PGQ+L +R NG+L YA
Sbjct: 198 QGSQFHPGNSPGQSLQGIQAMGVMGSLNMGSQIRPNGALTYAQQRINAGSMRQQPVQQNP 257
Query: 698 XXXXXQKLQAQNLTRTQSLASMNPQLSGLTQN 603
Q Q+L RT S+A MNPQ+SGL QN
Sbjct: 258 LTS-----QVQSLQRTPSMAYMNPQMSGLAQN 284
Score = 62.4 bits (150), Expect = 6e-07
Identities = 40/80 (50%), Positives = 44/80 (55%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
R+P T QKSLSL TEA+NQLLGKRKIQDLVSQVDS G+
Sbjct: 405 RMPGPTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSHGK 464
Query: 86 XXXXXXXXXXEIADDFIDSV 27
EIADDFIDS+
Sbjct: 465 LDPDVEELFLEIADDFIDSM 484
>ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248501 [Vitis vinifera]
gi|297743015|emb|CBI35882.3| unnamed protein product
[Vitis vinifera]
Length = 587
Score = 99.8 bits (247), Expect = 3e-18
Identities = 96/271 (35%), Positives = 110/271 (40%), Gaps = 7/271 (2%)
Frame = -1
Query: 1208 NFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXMSFGGSHLXXXXXXX 1029
N+ IQ +LQRSPS+SR+N Q +FGGS +
Sbjct: 68 NYPIQQTLQRSPSMSRINSMQSQTQQQQQQPMMVRQQTGMYSQM--NFGGSAIQQAQNQQ 125
Query: 1028 XXXQMATGG-----LSRSALMGQGAHL-PMLPGQTAQFNLQSQL-LGPAVRQKAALVQGS 870
A GG LSRSALMGQ HL PML GQ A +Q L + RQKA LVQGS
Sbjct: 126 QLGGGAAGGGGGGNLSRSALMGQTGHLSPMLSGQAAAAAAVAQFSLLTSPRQKAGLVQGS 185
Query: 869 QFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXXXXXXXXXXXXX 690
QFH GN PGQ+L LR NG+L YA
Sbjct: 186 QFHPGNAPGQSLSGMQAIGMMGPLNLSSQLRPNGTLTYAQQRINQGQMRQQLTQQSQLTP 245
Query: 689 XXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXXXXXXXXXXXXXXQPGISGPGS 510
QAQ+ RT SLA MNPQLS LTQNG P +S PGS
Sbjct: 246 S----QAQSRPRTSSLAFMNPQLSSLTQNG----QPGMLQNSLSQQQWLKQMPAMSTPGS 297
Query: 509 PYHXXXXXXXXXXXXXXXXLASSTQMHPKSM 417
P + LASS Q+H M
Sbjct: 298 PSY---RLQPRQQVLYQQQLASSPQLHQNPM 325
Score = 75.9 bits (185), Expect = 5e-11
Identities = 47/81 (58%), Positives = 49/81 (60%)
Frame = -1
Query: 245 QKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGRXXXXXXX 66
QKSLSL TEASNQLLGKRKIQDLVSQVDS+G+
Sbjct: 394 QKSLSLTGSQPDATASGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQVDSQGKLDPEVED 453
Query: 65 XXXEIADDFIDSVTTFACSLA 3
EIADDFIDSVTTFACSLA
Sbjct: 454 LLLEIADDFIDSVTTFACSLA 474
>ref|XP_006306911.1| hypothetical protein CARUB_v10008470mg [Capsella rubella]
gi|482575622|gb|EOA39809.1| hypothetical protein
CARUB_v10008470mg [Capsella rubella]
Length = 694
Score = 97.8 bits (242), Expect = 1e-17
Identities = 81/210 (38%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Frame = -1
Query: 1220 ISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXMSFGGSHLXXX 1041
I N+QI SLQRSPSISRL+ Q M+FGGS
Sbjct: 173 IPMSNYQIAQSLQRSPSISRLSQIQQQQQQQHPGQYGNVLRQQAGLYGTMNFGGS--GSV 230
Query: 1040 XXXXXXXQMATGGLSRSALMGQGAHLPML---PGQTAQFNLQSQLLGPAVRQKAALVQGS 870
Q+ LSR+AL+GQ HLP+L G AQ N+Q QLL + RQK+ LVQGS
Sbjct: 231 QQSQQNQQLGNPNLSRAALVGQTGHLPLLNGAAGAAAQMNIQPQLLAASPRQKSGLVQGS 290
Query: 869 QFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXXXXXXXXXXXXX 690
QFH G++ GQ L +R N +L YA
Sbjct: 291 QFHPGSS-GQQLQGMQAMGMMGSLNLTSQMRGNPAL-YAQQRINPGQMRQQLSQQNALTS 348
Query: 689 XXQKLQAQNLTRTQSLASMNPQLSGLTQNG 600
Q QNL RT SLA MNPQLSGL QNG
Sbjct: 349 P----QVQNLQRTSSLAFMNPQLSGLAQNG 374
Score = 66.6 bits (161), Expect = 3e-08
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = -1
Query: 158 EASNQLLGKRKIQDLVSQVDSRGRXXXXXXXXXXEIADDFIDSVTTFACSLA 3
EA+NQLLGKRKIQDLVSQVD + E+ADDFIDSVT+FACSLA
Sbjct: 533 EATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLA 584
>ref|XP_002304140.1| transcription initiation factor IID subunit A family protein [Populus
trichocarpa] gi|222841572|gb|EEE79119.1| transcription
initiation factor IID subunit A family protein [Populus
trichocarpa]
Length = 655
Score = 97.4 bits (241), Expect = 2e-17
Identities = 94/275 (34%), Positives = 112/275 (40%), Gaps = 5/275 (1%)
Frame = -1
Query: 1226 NMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXMSFGGSHLX 1047
N+ + +QIQ +LQRSPS+SR + Q M+FGGS
Sbjct: 99 NVTAMSGYQIQQTLQRSPSMSRSSQINQQQQNQ--YGGVLRQQQQQGLYGQMNFGGS-AS 155
Query: 1046 XXXXXXXXXQMATGGLSRSALMGQGAHLPMLPGQTA-----QFNLQSQLLGPAVRQKAAL 882
Q+ LSRSAL+GQ HLPM G A Q NL SQLL + RQKA L
Sbjct: 156 IQQNSQQNQQLGGANLSRSALLGQTGHLPMFTGAAAAAAAAQLNLPSQLLA-SPRQKAGL 214
Query: 881 VQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXXXXXXXXX 702
QGSQFH G++PGQ+L LR NG+L YA
Sbjct: 215 AQGSQFHSGDSPGQSLQGIQAMGVMGSSLNLSQLRPNGALAYAQQRMSAGSMRQQLVQQN 274
Query: 701 XXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXXXXXXXXXXXXXXQPGIS 522
Q Q+L RTQSLA MN Q+SGL QN P +S
Sbjct: 275 SLTS-----QVQSLQRTQSLAYMNHQMSGLAQNA----QPTMMQSSLSQQQWLKQMPTMS 325
Query: 521 GPGSPYHXXXXXXXXXXXXXXXXLASSTQMHPKSM 417
GP SP LASS Q+H SM
Sbjct: 326 GPASP--SLHLQQRQSQAFLQQQLASSGQLHQNSM 358
Score = 73.9 bits (180), Expect = 2e-10
Identities = 46/88 (52%), Positives = 50/88 (56%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
R+P QK+LSL TEA+NQLLGKRKIQDLVSQVDS G+
Sbjct: 427 RMPGPPGQKTLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSHGK 486
Query: 86 XXXXXXXXXXEIADDFIDSVTTFACSLA 3
EIADDFIDSVT FACSLA
Sbjct: 487 LDPEVEELFLEIADDFIDSVTAFACSLA 514
>ref|XP_002892951.1| hypothetical protein ARALYDRAFT_471949 [Arabidopsis lyrata subsp.
lyrata] gi|297338793|gb|EFH69210.1| hypothetical protein
ARALYDRAFT_471949 [Arabidopsis lyrata subsp. lyrata]
Length = 670
Score = 95.9 bits (237), Expect = 5e-17
Identities = 81/211 (38%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Frame = -1
Query: 1220 ISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXMS--FGGSHLX 1047
I N+QI SLQRSPSISRL+ Q + FGGS
Sbjct: 147 IPMSNYQIPQSLQRSPSISRLSQIQQQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGS--G 204
Query: 1046 XXXXXXXXXQMATGGLSRSALMGQGAHLPMLPGQ--TAQFNLQSQLLGPAVRQKAALVQG 873
QM +SR+AL+GQ HLPML G +AQ N+Q QLL + RQK+ LVQG
Sbjct: 205 SVQQSQQNQQMVNPNMSRAALVGQSGHLPMLNGAAGSAQMNIQPQLLAASPRQKSGLVQG 264
Query: 872 SQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXXXXXXXXXXXX 693
SQFH G++ GQ L +R N +L YA
Sbjct: 265 SQFHPGSS-GQQLQGMQAMGMMGSLNLTSQMRGNPAL-YAQQRINPGQMRQQLSQQNALT 322
Query: 692 XXXQKLQAQNLTRTQSLASMNPQLSGLTQNG 600
Q QNL RT SLA MNPQLSGL QNG
Sbjct: 323 SP----QVQNLQRTSSLAFMNPQLSGLAQNG 349
Score = 65.9 bits (159), Expect = 5e-08
Identities = 41/88 (46%), Positives = 48/88 (54%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
R+ QKS+SL T+A+NQLLGKRKIQDLVSQVD +
Sbjct: 473 RMSSHAGQKSVSLTGSQPDATQSGTTTPGGSSSQGTDATNQLLGKRKIQDLVSQVDVHAK 532
Query: 86 XXXXXXXXXXEIADDFIDSVTTFACSLA 3
E+ADDFIDSVT+FACSLA
Sbjct: 533 LDPDVEDLLLEVADDFIDSVTSFACSLA 560
>ref|XP_003528481.1| PREDICTED: transcription initiation factor TFIID subunit 12b-like
[Glycine max]
Length = 599
Score = 95.5 bits (236), Expect = 6e-17
Identities = 77/209 (36%), Positives = 90/209 (43%)
Frame = -1
Query: 1226 NMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXMSFGGSHLX 1047
NM NFQ+Q S+QRSPS+SRLN Q MSF +
Sbjct: 86 NMNPISNFQLQQSMQRSPSLSRLNQIQPQQTTQQQQQFGVMRQQAGLYGGQMSFAAA--- 142
Query: 1046 XXXXXXXXXQMATGGLSRSALMGQGAHLPMLPGQTAQFNLQSQLLGPAVRQKAALVQGSQ 867
Q+ LSRSALMGQ H PML G QFNL S + RQK LVQ SQ
Sbjct: 143 GGAGAAQQQQLGGSNLSRSALMGQSGHFPMLSGAGTQFNLLS-----SPRQKGGLVQSSQ 197
Query: 866 FHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXXXXXXXXXXXXXX 687
F GN+ GQ+L LRANG++ YA
Sbjct: 198 FSSGNSAGQSLQGMQAMGMMGSPNLTSQLRANGAMAYA---QQLRMSQGQIRQQLSQQGS 254
Query: 686 XQKLQAQNLTRTQSLASMNPQLSGLTQNG 600
Q Q L R+ SLA M+ QLSGL+QNG
Sbjct: 255 LNTAQVQGLPRSSSLAFMSSQLSGLSQNG 283
Score = 65.9 bits (159), Expect = 5e-08
Identities = 41/88 (46%), Positives = 47/88 (53%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
R+P QKSLSL TEA+NQ+LGKRKIQDLV+QVD +GR
Sbjct: 400 RMPGPAGQKSLSLTGSQPDVTASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGR 459
Query: 86 XXXXXXXXXXEIADDFIDSVTTFACSLA 3
E+ADDFIDS TT C LA
Sbjct: 460 LDPEVIDLLLELADDFIDSATTHGCILA 487
>gb|AAF97312.1|AC007843_15 Unknown protein [Arabidopsis thaliana]
Length = 674
Score = 95.1 bits (235), Expect = 8e-17
Identities = 78/209 (37%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Frame = -1
Query: 1220 ISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXMSFGGSHLXXX 1041
I ++QI SLQRSPS+SRL+ Q M+FGGS
Sbjct: 158 IPMSSYQIAQSLQRSPSLSRLSQIQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGS--GSV 215
Query: 1040 XXXXXXXQMATGGLSRSALMGQGAHLPMLPGQT--AQFNLQSQLLGPAVRQKAALVQGSQ 867
QM +SR+ L+GQ HLPML G AQ N+Q QLL + RQK+ +VQGSQ
Sbjct: 216 QQSQQNQQMVNPNMSRAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQ 275
Query: 866 FHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXXXXXXXXXXXXXX 687
FH G++ GQ L +R N +L YA
Sbjct: 276 FHPGSS-GQQLQGMQAMGMMGSLNLTSQMRGNPAL-YAQQRINPGQMRQQLSQQNALTSP 333
Query: 686 XQKLQAQNLTRTQSLASMNPQLSGLTQNG 600
Q QNL RT SLA MNPQLSGL QNG
Sbjct: 334 ----QVQNLQRTSSLAFMNPQLSGLAQNG 358
Score = 66.6 bits (161), Expect = 3e-08
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = -1
Query: 158 EASNQLLGKRKIQDLVSQVDSRGRXXXXXXXXXXEIADDFIDSVTTFACSLA 3
EA+NQLLGKRKIQDLVSQVD + E+ADDFIDSVT+FACSLA
Sbjct: 522 EATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLA 573
>ref|NP_564023.1| transcription initiation factor TFIID subunit 12B [Arabidopsis
thaliana] gi|30685323|ref|NP_849680.1| transcription
initiation factor TFIID subunit 12B [Arabidopsis
thaliana] gi|75249490|sp|Q940A7.1|TA12B_ARATH RecName:
Full=Transcription initiation factor TFIID subunit 12b;
AltName: Full=Protein CYTOKININ-HYPERSENSITIVE 1;
AltName: Full=Protein ENHANCED ETHYLENE RESPONSE 4;
AltName: Full=TBP-associated factor 12b; Short=AtTAF12b
gi|15810159|gb|AAL07223.1| unknown protein [Arabidopsis
thaliana] gi|20259253|gb|AAM14362.1| unknown protein
[Arabidopsis thaliana] gi|39545906|gb|AAR28016.1| TAF12b
[Arabidopsis thaliana] gi|332191466|gb|AEE29587.1|
transcription initiation factor TFIID subunit A
[Arabidopsis thaliana] gi|332191467|gb|AEE29588.1|
transcription initiation factor TFIID subunit A
[Arabidopsis thaliana]
Length = 683
Score = 95.1 bits (235), Expect = 8e-17
Identities = 78/209 (37%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Frame = -1
Query: 1220 ISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXMSFGGSHLXXX 1041
I ++QI SLQRSPS+SRL+ Q M+FGGS
Sbjct: 158 IPMSSYQIAQSLQRSPSLSRLSQIQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGS--GSV 215
Query: 1040 XXXXXXXQMATGGLSRSALMGQGAHLPMLPGQT--AQFNLQSQLLGPAVRQKAALVQGSQ 867
QM +SR+ L+GQ HLPML G AQ N+Q QLL + RQK+ +VQGSQ
Sbjct: 216 QQSQQNQQMVNPNMSRAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQ 275
Query: 866 FHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXXXXXXXXXXXXXX 687
FH G++ GQ L +R N +L YA
Sbjct: 276 FHPGSS-GQQLQGMQAMGMMGSLNLTSQMRGNPAL-YAQQRINPGQMRQQLSQQNALTSP 333
Query: 686 XQKLQAQNLTRTQSLASMNPQLSGLTQNG 600
Q QNL RT SLA MNPQLSGL QNG
Sbjct: 334 ----QVQNLQRTSSLAFMNPQLSGLAQNG 358
Score = 66.6 bits (161), Expect = 3e-08
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = -1
Query: 158 EASNQLLGKRKIQDLVSQVDSRGRXXXXXXXXXXEIADDFIDSVTTFACSLA 3
EA+NQLLGKRKIQDLVSQVD + E+ADDFIDSVT+FACSLA
Sbjct: 522 EATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLA 573
>ref|XP_006416703.1| hypothetical protein EUTSA_v10006997mg [Eutrema salsugineum]
gi|557094474|gb|ESQ35056.1| hypothetical protein
EUTSA_v10006997mg [Eutrema salsugineum]
Length = 668
Score = 94.4 bits (233), Expect = 1e-16
Identities = 80/205 (39%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Frame = -1
Query: 1208 NFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXMSFGGSHLXXXXXXX 1029
N+QI SLQRSPS+SRLN +FGGS
Sbjct: 166 NYQIAQSLQRSPSVSRLNQIQQQQQQHQGQYGNVLRQQAGLYGTM-NFGGS-----GSVQ 219
Query: 1028 XXXQMATGGLSRSALMGQGAHLPMLPGQT--AQFNLQSQLLGPAVRQKAALVQGSQFHQG 855
QM +SR+AL+GQ HLPML G AQ N+Q QLL + RQK LVQGSQFHQG
Sbjct: 220 QSQQMGNPNMSRAALVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKTGLVQGSQFHQG 279
Query: 854 NNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXXXXXXXXXXXXXXXQKL 675
++ GQ L +R N +L YA
Sbjct: 280 SS-GQQLQ---GMQAMGMMNLTSQMRGNPAL-YAQQRINPGQMRQQLSQQNALTSP---- 330
Query: 674 QAQNLTRTQSLASMNPQLSGLTQNG 600
Q QNL RT SLA MNPQLSGL QNG
Sbjct: 331 QVQNLQRTSSLAFMNPQLSGLAQNG 355
Score = 67.0 bits (162), Expect = 2e-08
Identities = 42/88 (47%), Positives = 48/88 (54%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
R+ QKS+SL TEA+NQLLGKRKIQDLVSQVD +
Sbjct: 471 RMSSHAGQKSVSLTGSQPDATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDVHAK 530
Query: 86 XXXXXXXXXXEIADDFIDSVTTFACSLA 3
E+ADDFIDSVT+FACSLA
Sbjct: 531 LDPDVEDLLLEVADDFIDSVTSFACSLA 558
>ref|XP_007024610.1| Transcription initiation factor TFIID subunit A isoform 4 [Theobroma
cacao] gi|508779976|gb|EOY27232.1| Transcription
initiation factor TFIID subunit A isoform 4 [Theobroma
cacao]
Length = 672
Score = 92.8 bits (229), Expect = 4e-16
Identities = 96/284 (33%), Positives = 112/284 (39%), Gaps = 14/284 (4%)
Frame = -1
Query: 1226 NMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXM-------- 1071
N+ + NFQIQ +LQRSPS SRLN Q
Sbjct: 134 NVAALSNFQIQQTLQRSPSFSRLNPLQQQQQQQSQQQQQQQQQSQYGTVLRQQAGLYGQM 193
Query: 1070 SFGGSHLXXXXXXXXXXQ--MATGGLSRSALMGQGAHLPMLPGQTA----QFNLQSQLLG 909
+FGGS ++ L RSAL+GQ HLPML G A Q +LQ QLL
Sbjct: 194 NFGGSASIQANQQQNQQIQQISNPNLPRSALIGQSGHLPMLSGAAAAAAAQLSLQPQLLA 253
Query: 908 PAVRQKAALVQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXX 729
+ RQKA LVQGSQFH GN GQ+L LRANG+L YA
Sbjct: 254 -SPRQKAGLVQGSQFHPGNPTGQSLQ---GMQAMGMMNLSSQLRANGNL-YAQHRINQGQ 308
Query: 728 XXXXXXXXXXXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXXXXXXXXXX 549
Q Q+L RT S A +NPQLSGL Q+G
Sbjct: 309 MRQQLSQQTQLTSP----QVQSLPRTSSQAFINPQLSGLAQSG----QPGMMQNSLLQQQ 360
Query: 548 XXXXQPGISGPGSPYHXXXXXXXXXXXXXXXXLASSTQMHPKSM 417
P ISGPGSP +SS Q+H SM
Sbjct: 361 WLKQMPSISGPGSP--SFRLQRQSQVLLPQQLASSSPQLHQNSM 402
Score = 73.2 bits (178), Expect = 3e-10
Identities = 48/89 (53%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQ-VDSRG 90
R+P QKSLSL TEA+NQLLGKRKIQDLVSQ VDS+G
Sbjct: 473 RMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQQVDSQG 532
Query: 89 RXXXXXXXXXXEIADDFIDSVTTFACSLA 3
+ EIADDFIDSVTTFACSLA
Sbjct: 533 KLEPEVEDLLLEIADDFIDSVTTFACSLA 561
>ref|XP_007024609.1| Transcription initiation factor TFIID subunit A isoform 3 [Theobroma
cacao] gi|508779975|gb|EOY27231.1| Transcription
initiation factor TFIID subunit A isoform 3 [Theobroma
cacao]
Length = 671
Score = 92.8 bits (229), Expect = 4e-16
Identities = 96/284 (33%), Positives = 112/284 (39%), Gaps = 14/284 (4%)
Frame = -1
Query: 1226 NMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXM-------- 1071
N+ + NFQIQ +LQRSPS SRLN Q
Sbjct: 134 NVAALSNFQIQQTLQRSPSFSRLNPLQQQQQQQSQQQQQQQQQSQYGTVLRQQAGLYGQM 193
Query: 1070 SFGGSHLXXXXXXXXXXQ--MATGGLSRSALMGQGAHLPMLPGQTA----QFNLQSQLLG 909
+FGGS ++ L RSAL+GQ HLPML G A Q +LQ QLL
Sbjct: 194 NFGGSASIQANQQQNQQIQQISNPNLPRSALIGQSGHLPMLSGAAAAAAAQLSLQPQLLA 253
Query: 908 PAVRQKAALVQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXX 729
+ RQKA LVQGSQFH GN GQ+L LRANG+L YA
Sbjct: 254 -SPRQKAGLVQGSQFHPGNPTGQSLQ---GMQAMGMMNLSSQLRANGNL-YAQHRINQGQ 308
Query: 728 XXXXXXXXXXXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXXXXXXXXXX 549
Q Q+L RT S A +NPQLSGL Q+G
Sbjct: 309 MRQQLSQQTQLTSP----QVQSLPRTSSQAFINPQLSGLAQSG----QPGMMQNSLLQQQ 360
Query: 548 XXXXQPGISGPGSPYHXXXXXXXXXXXXXXXXLASSTQMHPKSM 417
P ISGPGSP +SS Q+H SM
Sbjct: 361 WLKQMPSISGPGSP--SFRLQRQSQVLLPQQLASSSPQLHQNSM 402
Score = 77.8 bits (190), Expect = 1e-11
Identities = 48/88 (54%), Positives = 52/88 (59%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
R+P QKSLSL TEA+NQLLGKRKIQDLVSQVDS+G+
Sbjct: 473 RMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGK 532
Query: 86 XXXXXXXXXXEIADDFIDSVTTFACSLA 3
EIADDFIDSVTTFACSLA
Sbjct: 533 LEPEVEDLLLEIADDFIDSVTTFACSLA 560
>ref|XP_007024608.1| Transcription initiation factor TFIID subunit A isoform 2 [Theobroma
cacao] gi|508779974|gb|EOY27230.1| Transcription
initiation factor TFIID subunit A isoform 2 [Theobroma
cacao]
Length = 552
Score = 92.8 bits (229), Expect = 4e-16
Identities = 96/284 (33%), Positives = 112/284 (39%), Gaps = 14/284 (4%)
Frame = -1
Query: 1226 NMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXM-------- 1071
N+ + NFQIQ +LQRSPS SRLN Q
Sbjct: 134 NVAALSNFQIQQTLQRSPSFSRLNPLQQQQQQQSQQQQQQQQQSQYGTVLRQQAGLYGQM 193
Query: 1070 SFGGSHLXXXXXXXXXXQ--MATGGLSRSALMGQGAHLPMLPGQTA----QFNLQSQLLG 909
+FGGS ++ L RSAL+GQ HLPML G A Q +LQ QLL
Sbjct: 194 NFGGSASIQANQQQNQQIQQISNPNLPRSALIGQSGHLPMLSGAAAAAAAQLSLQPQLLA 253
Query: 908 PAVRQKAALVQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXX 729
+ RQKA LVQGSQFH GN GQ+L LRANG+L YA
Sbjct: 254 -SPRQKAGLVQGSQFHPGNPTGQSLQ---GMQAMGMMNLSSQLRANGNL-YAQHRINQGQ 308
Query: 728 XXXXXXXXXXXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXXXXXXXXXX 549
Q Q+L RT S A +NPQLSGL Q+G
Sbjct: 309 MRQQLSQQTQLTSP----QVQSLPRTSSQAFINPQLSGLAQSG----QPGMMQNSLLQQQ 360
Query: 548 XXXXQPGISGPGSPYHXXXXXXXXXXXXXXXXLASSTQMHPKSM 417
P ISGPGSP +SS Q+H SM
Sbjct: 361 WLKQMPSISGPGSP--SFRLQRQSQVLLPQQLASSSPQLHQNSM 402
Score = 62.0 bits (149), Expect = 8e-07
Identities = 40/80 (50%), Positives = 44/80 (55%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
R+P QKSLSL TEA+NQLLGKRKIQDLVSQVDS+G+
Sbjct: 473 RMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGK 532
Query: 86 XXXXXXXXXXEIADDFIDSV 27
EIADDFIDSV
Sbjct: 533 LEPEVEDLLLEIADDFIDSV 552
>ref|XP_007024607.1| Transcription initiation factor TFIID subunit A isoform 1 [Theobroma
cacao] gi|508779973|gb|EOY27229.1| Transcription
initiation factor TFIID subunit A isoform 1 [Theobroma
cacao]
Length = 670
Score = 92.8 bits (229), Expect = 4e-16
Identities = 96/284 (33%), Positives = 112/284 (39%), Gaps = 14/284 (4%)
Frame = -1
Query: 1226 NMISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXM-------- 1071
N+ + NFQIQ +LQRSPS SRLN Q
Sbjct: 134 NVAALSNFQIQQTLQRSPSFSRLNPLQQQQQQQSQQQQQQQQQSQYGTVLRQQAGLYGQM 193
Query: 1070 SFGGSHLXXXXXXXXXXQ--MATGGLSRSALMGQGAHLPMLPGQTA----QFNLQSQLLG 909
+FGGS ++ L RSAL+GQ HLPML G A Q +LQ QLL
Sbjct: 194 NFGGSASIQANQQQNQQIQQISNPNLPRSALIGQSGHLPMLSGAAAAAAAQLSLQPQLLA 253
Query: 908 PAVRQKAALVQGSQFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXX 729
+ RQKA LVQGSQFH GN GQ+L LRANG+L YA
Sbjct: 254 -SPRQKAGLVQGSQFHPGNPTGQSLQ---GMQAMGMMNLSSQLRANGNL-YAQHRINQGQ 308
Query: 728 XXXXXXXXXXXXXXXQKLQAQNLTRTQSLASMNPQLSGLTQNGXXXXXXXXXXXXXXXXX 549
Q Q+L RT S A +NPQLSGL Q+G
Sbjct: 309 MRQQLSQQTQLTSP----QVQSLPRTSSQAFINPQLSGLAQSG----QPGMMQNSLLQQQ 360
Query: 548 XXXXQPGISGPGSPYHXXXXXXXXXXXXXXXXLASSTQMHPKSM 417
P ISGPGSP +SS Q+H SM
Sbjct: 361 WLKQMPSISGPGSP--SFRLQRQSQVLLPQQLASSSPQLHQNSM 402
Score = 77.8 bits (190), Expect = 1e-11
Identities = 48/88 (54%), Positives = 52/88 (59%)
Frame = -1
Query: 266 RIPDSTVQKSLSLXXXXXXXXXXXXXXXXXXXXXXTEASNQLLGKRKIQDLVSQVDSRGR 87
R+P QKSLSL TEA+NQLLGKRKIQDLVSQVDS+G+
Sbjct: 473 RMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGK 532
Query: 86 XXXXXXXXXXEIADDFIDSVTTFACSLA 3
EIADDFIDSVTTFACSLA
Sbjct: 533 LEPEVEDLLLEIADDFIDSVTTFACSLA 560
>sp|B2C6R6.1|TAFCL_ARATH RecName: Full=Transcription initiation factor TFIID subunit 12b;
AltName: Full=Protein CYTOKININ-HYPERSENSITIVE 1;
AltName: Full=Protein ENHANCED ETHYLENE RESPONSE 4;
AltName: Full=TBP-associated factor 12b; Short=AtTAF12b
gi|169218920|gb|ACA50283.1| cytokinin hypersensitive 1
[Arabidopsis thaliana]
Length = 681
Score = 92.4 bits (228), Expect = 5e-16
Identities = 78/210 (37%), Positives = 94/210 (44%), Gaps = 3/210 (1%)
Frame = -1
Query: 1220 ISQKNFQIQPSLQRSPSISRLNXXXXXXXXQPXXXXXXXXXXXXXXXXXM-SFGGSHLXX 1044
I ++QI SLQRSPS+SRL+ Q +FGGS
Sbjct: 158 IPMSSYQIAQSLQRSPSLSRLSQIQQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGS--GS 215
Query: 1043 XXXXXXXXQMATGGLSRSALMGQGAHLPMLPGQT--AQFNLQSQLLGPAVRQKAALVQGS 870
QM +SR+AL+GQ HLPML G AQ N+Q QLL + RQK+ +VQGS
Sbjct: 216 VQQSQQNQQMVNPNMSRAALVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGS 275
Query: 869 QFHQGNNPGQTLHXXXXXXXXXXXXXXXXLRANGSLPYAXXXXXXXXXXXXXXXXXXXXX 690
QFH G++ GQ L +R N +L YA
Sbjct: 276 QFHPGSS-GQQLQGMQAMGMMGSLNLTSQMRGNPAL-YAQQRINPGQMRQQLSQQNALTS 333
Query: 689 XXQKLQAQNLTRTQSLASMNPQLSGLTQNG 600
Q QNL RT SLA MNPQLSGL QNG
Sbjct: 334 P----QVQNLQRTSSLAFMNPQLSGLAQNG 359
Score = 66.6 bits (161), Expect = 3e-08
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = -1
Query: 158 EASNQLLGKRKIQDLVSQVDSRGRXXXXXXXXXXEIADDFIDSVTTFACSLA 3
EA+NQLLGKRKIQDLVSQVD + E+ADDFIDSVT+FACSLA
Sbjct: 520 EATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLA 571