BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00016633
         (1150 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   333   6e-89
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   333   1e-88
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr...   330   7e-88
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...   323   6e-86
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   323   1e-85
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              323   1e-85
ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1...   320   5e-85
ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part...   319   1e-84
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]             317   8e-84
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         316   1e-83
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso...   316   1e-83
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso...   314   5e-83
ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatul...   312   2e-82
ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform ...   311   3e-82
ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform ...   311   4e-82
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso...   306   8e-81
gb|EYU32990.1| hypothetical protein MIMGU_mgv1a012190mg [Mimulus...   303   7e-80
ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   302   2e-79
ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu...   293   9e-77
ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab...   280   1e-72

>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score =  333 bits (855), Expect = 6e-89
 Identities = 163/258 (63%), Positives = 203/258 (78%), Gaps = 1/258 (0%)
 Frame = +3

Query: 39  RRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQWD 218
           R +CLKLE+++       D IFVKG WF++HFDLSIT+GL+ W+CNASE +V++RA QWD
Sbjct: 4   RHTCLKLEISDAT-----DPIFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQWD 58

Query: 219 QSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNNRK 398
           Q V+EYI+ AERYLGF+QPGS YGF DA DG KRLSWTFEK+G KLEWRWKC P+ N++K
Sbjct: 59  QPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSKK 118

Query: 399 TSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEKFV 578
            +A ILDFLMDANIRLS+EVV KTQSFE LKVEAEKCL++SE+  NEK EFESA++ KF+
Sbjct: 119 VTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIYAKFL 178

Query: 579 AVLNSKNAKVRELRDRLSTQET-NEKSPEAENSTERTESYDELTDDDKSEAKPTSNLTGT 755
            VLNSK +K+RELRD+LS Q    +   E E ST++TES+DE +DDDKSE +P   +T T
Sbjct: 179 GVLNSKKSKLRELRDKLSKQAVMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKAITST 238

Query: 756 SKSEPVTRQYTRKRKTQK 809
           SK  P +R   RKR ++K
Sbjct: 239 SKGVPASRARGRKRISRK 256


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  333 bits (853), Expect = 1e-88
 Identities = 166/263 (63%), Positives = 206/263 (78%), Gaps = 3/263 (1%)
 Frame = +3

Query: 30  DSIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAE 209
           ++ R +CLKLE+TE         IFVKG WFDSHF LSIT+GL+AWVCNA+E +V+ERA 
Sbjct: 11  ETARHTCLKLEITEP--------IFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAA 62

Query: 210 QWDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSN 389
           QWDQ VSEYI  AE YLGF+QPGS Y F DAGD HKRLSWTFEK+G KLEWRWKC+PS +
Sbjct: 63  QWDQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPD 122

Query: 390 NRKTSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFE 569
           N+ T+A ILDFLMDANIRLSEEVV+KT SFE LK EA+KCL++SE+ A EK EFES+++ 
Sbjct: 123 NKMTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYA 182

Query: 570 KFVAVLNSKNAKVRELRDRLSTQETNEKSP--EAENSTERTESYDE-LTDDDKSEAKPTS 740
           KF+AVLNSK  K+R+LRD+LS +E + K P  E E ST++TES++E  +D DKSE +P  
Sbjct: 183 KFLAVLNSKKRKLRQLRDQLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKSEEEPPE 242

Query: 741 NLTGTSKSEPVTRQYTRKRKTQK 809
            +TGTS+ +P +R   RKR T+K
Sbjct: 243 KVTGTSEDKPSSRGRGRKRITRK 265


>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
           gi|557522035|gb|ESR33402.1| hypothetical protein
           CICLE_v10005690mg [Citrus clementina]
          Length = 256

 Score =  330 bits (846), Expect = 7e-88
 Identities = 160/261 (61%), Positives = 202/261 (77%)
 Frame = +3

Query: 27  MDSIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERA 206
           M++   +CLKLE+ +       D IFVKG WF +HFDLSIT+GL+AW+CNASE +V++RA
Sbjct: 1   MEATSHTCLKLEIPDAT-----DPIFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRA 55

Query: 207 EQWDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSS 386
             WDQ V+EY++ AERYLGF+QPGS YGF DA DG KRLSWTFEK+G KLEWRWKC  + 
Sbjct: 56  ALWDQPVTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAP 115

Query: 387 NNRKTSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVF 566
           N++K +A ILDFLMDANIRLS+EVV KTQSFE LKVEAEKCL++SE+  NEK EFESA++
Sbjct: 116 NSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAIY 175

Query: 567 EKFVAVLNSKNAKVRELRDRLSTQETNEKSPEAENSTERTESYDELTDDDKSEAKPTSNL 746
            KF+ VLNSK +K+RELRD+LS Q       + E ST++TES+DE +DDDKSE +P  ++
Sbjct: 176 AKFLGVLNSKKSKLRELRDKLSKQAVMGDLQQEEQSTDKTESFDEGSDDDKSEEEPAKDI 235

Query: 747 TGTSKSEPVTRQYTRKRKTQK 809
           T TSK  P +R   RKR ++K
Sbjct: 236 TSTSKGVPASRARGRKRISRK 256


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
           gi|557522040|gb|ESR33407.1| hypothetical protein
           CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score =  323 bits (829), Expect = 6e-86
 Identities = 159/258 (61%), Positives = 199/258 (77%), Gaps = 1/258 (0%)
 Frame = +3

Query: 39  RRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQWD 218
           R +CLKLE+ +       D IF KG WF +HFDLSIT+GL+AW+CNASE +V++RA QWD
Sbjct: 4   RHTCLKLEIPDAT-----DPIFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWD 58

Query: 219 QSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNNRK 398
           Q V+EYI+ AERYLGF+QPGS YGF DA DG KRLSWTFEK+G KLEWRWK  P+ N++K
Sbjct: 59  QPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNSKK 118

Query: 399 TSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEKFV 578
            +A ILDFLMDANIRLS+EVV KTQSFE LKVE +KCL++SE+  NEK EFESA++ KF+
Sbjct: 119 VTAGILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIYSKFL 178

Query: 579 AVLNSKNAKVRELRDRLSTQET-NEKSPEAENSTERTESYDELTDDDKSEAKPTSNLTGT 755
            VLNSK +K+RELRD+LS Q    +   E E ST++TES+D  +DDDKSE +PT ++T T
Sbjct: 179 GVLNSKKSKLRELRDKLSKQAVMGDLQQEEEESTDKTESFDGGSDDDKSEEQPTKDITST 238

Query: 756 SKSEPVTRQYTRKRKTQK 809
           S   P +R   RKR ++K
Sbjct: 239 SIGVPASRARGRKRISRK 256


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  323 bits (827), Expect = 1e-85
 Identities = 161/254 (63%), Positives = 199/254 (78%), Gaps = 1/254 (0%)
 Frame = +3

Query: 39  RRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQWD 218
           R SCLKL++  ++E      IF+K  WF SHF LSIT+GL AW+CNASE EVRERA QWD
Sbjct: 6   RHSCLKLQIPNQSEP-----IFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 219 QSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNNRK 398
           Q VS+YI  AER+LGF+QPGS YGF DAGDGH+RLSWTFEK+G KLEWRWKC  S ++R 
Sbjct: 61  QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120

Query: 399 TSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEKFV 578
           T+A +LDFLM+ANIRLSEEVV KTQSFE LKVEAEKCL++SEK  NEK EFESA++ KF+
Sbjct: 121 TTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFL 180

Query: 579 AVLNSKNAKVRELRDRLSTQETNEKSPEAEN-STERTESYDELTDDDKSEAKPTSNLTGT 755
            VLNSK AK+RELRD++S +ET  K P+ E+ ST++T S+D+ +D++  E + + NLTGT
Sbjct: 181 GVLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEESSKNLTGT 240

Query: 756 SKSEPVTRQYTRKR 797
           SK    +R   RKR
Sbjct: 241 SKHVSTSRPRGRKR 254


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  323 bits (827), Expect = 1e-85
 Identities = 161/254 (63%), Positives = 199/254 (78%), Gaps = 1/254 (0%)
 Frame = +3

Query: 39  RRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQWD 218
           R SCLKL++  ++E      IF+K  WF SHF LSIT+GL AW+CNASE EVRERA QWD
Sbjct: 6   RHSCLKLQIPNQSEP-----IFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 219 QSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNNRK 398
           Q VS+YI  AER+LGF+QPGS YGF DAGDGH+RLSWTFEK+G KLEWRWKC  S ++R 
Sbjct: 61  QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120

Query: 399 TSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEKFV 578
           T+A +LDFLM+ANIRLSEEVV KTQSFE LKVEAEKCL++SEK  NEK EFESA++ KF+
Sbjct: 121 TTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFL 180

Query: 579 AVLNSKNAKVRELRDRLSTQETNEKSPEAEN-STERTESYDELTDDDKSEAKPTSNLTGT 755
            VLNSK AK+RELRD++S +ET  K P+ E+ ST++T S+D+ +D++  E + + NLTGT
Sbjct: 181 GVLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEESSKNLTGT 240

Query: 756 SKSEPVTRQYTRKR 797
           SK    +R   RKR
Sbjct: 241 SKHVSTSRPRGRKR 254


>ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
           gi|508714033|gb|EOY05930.1| DNA repair protein XRCC4,
           putative isoform 1 [Theobroma cacao]
          Length = 263

 Score =  320 bits (821), Expect = 5e-85
 Identities = 165/269 (61%), Positives = 198/269 (73%), Gaps = 3/269 (1%)
 Frame = +3

Query: 12  LEASVMDSIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESE 191
           +E S   + R +CLKLE+         + IFVKG WFD+HFD+SIT+GL AWVCNA+E E
Sbjct: 1   METSSSSTTRHTCLKLEIPST------EPIFVKGTWFDAHFDISITDGLHAWVCNATEEE 54

Query: 192 VRERAEQWDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWK 371
           V+ERA QWDQ V+EYIE AERYLGF+Q GS Y F DAGD HKRLSW FEK+G KLEWRWK
Sbjct: 55  VKERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWK 114

Query: 372 CKPSSNNRKTSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEF 551
            +PS +++K +  ILDFLMDANIRLSEEV RKTQSFE LKVEAEKCL +SE+  NEK EF
Sbjct: 115 FRPSPDSQKITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNEKMEF 174

Query: 552 ESAVFEKFVAVLNSKNAKVRELRDRLSTQETNEKS-PEAENSTERTESYDELTDDDKSEA 728
           ES ++ KF+ VLNSK AK+RELRD+LS QET  K+  E E+ST++TESY   +D +  E 
Sbjct: 175 ESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTESYHTGSDAEGGEE 234

Query: 729 KPTSNLTGTSKSEPVT--RQYTRKRKTQK 809
           +P  NLT T K  P    R   RKR T+K
Sbjct: 235 EPEKNLTSTCKDVPAAAGRGRGRKRATRK 263


>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
           gi|557522045|gb|ESR33412.1| hypothetical protein
           CICLE_v10007171mg, partial [Citrus clementina]
          Length = 243

 Score =  319 bits (818), Expect = 1e-84
 Identities = 154/240 (64%), Positives = 191/240 (79%), Gaps = 1/240 (0%)
 Frame = +3

Query: 93  DVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQWDQSVSEYIETAERYLGFRQ 272
           D  +VKG WF +HFDLSIT+GL+AW+CNASE +V++RA QWDQ V+EY++ AERYLGF+Q
Sbjct: 4   DETYVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQPVTEYVKLAERYLGFQQ 63

Query: 273 PGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNNRKTSAAILDFLMDANIRLSE 452
           PGS Y F DA DG KRLSWTFEK+G KLEWRWKC  + N++K +A ILDFLMDANIRLS+
Sbjct: 64  PGSVYAFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTAGILDFLMDANIRLSD 123

Query: 453 EVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEKFVAVLNSKNAKVRELRDRLS 632
           EVV KTQSFE LKVEAEKCL++SE+  NEK EFESAV+ KF+ VLNSK +K+RELRD+LS
Sbjct: 124 EVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAVYAKFLGVLNSKKSKLRELRDKLS 183

Query: 633 TQET-NEKSPEAENSTERTESYDELTDDDKSEAKPTSNLTGTSKSEPVTRQYTRKRKTQK 809
            Q    +   E E ST++TES+DE +DDDKSE +P  ++T TSK  P +R   RKR ++K
Sbjct: 184 KQAVMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKDITSTSKGVPASRARGRKRISRK 243


>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
          Length = 257

 Score =  317 bits (811), Expect = 8e-84
 Identities = 157/261 (60%), Positives = 196/261 (75%), Gaps = 1/261 (0%)
 Frame = +3

Query: 30  DSIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAE 209
           +S R +CLKLE       +D D IFV   WF SHF+LS+T+G  AW+C+ASE EVR+RA 
Sbjct: 3   ESKRHTCLKLE------PKDSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVRDRAA 56

Query: 210 QWDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSN 389
           QWDQ V EY+  AERYLGF+QP S Y F DAGDGHKRLSWTFEK+G KL+WRWKC+P+ +
Sbjct: 57  QWDQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQPAPD 116

Query: 390 NRKTSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFE 569
           ++KT+A  LDFLMDANIRLSEEVV K+QSFE LKVEAEKCL +SEKI+NEK EFES ++ 
Sbjct: 117 SKKTTAETLDFLMDANIRLSEEVVIKSQSFERLKVEAEKCLEQSEKISNEKMEFESTLYA 176

Query: 570 KFVAVLNSKNAKVRELRDRLSTQE-TNEKSPEAENSTERTESYDELTDDDKSEAKPTSNL 746
           KF+ VLNSK AK+RELR +L   +    K P+ E ST++TES+D+ +DD K E + + N+
Sbjct: 177 KFLGVLNSKKAKLRELRAQLEKNDPAAGKLPQEEGSTDKTESFDDGSDDGKGEEESSENV 236

Query: 747 TGTSKSEPVTRQYTRKRKTQK 809
           TGTSK    +R   RKR  +K
Sbjct: 237 TGTSKGAQTSRSRGRKRTVRK 257


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  316 bits (810), Expect = 1e-83
 Identities = 155/257 (60%), Positives = 195/257 (75%)
 Frame = +3

Query: 39  RRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQWD 218
           R +CLKLE+        P+ IF+KG WF  HF+LSIT+GL++W CNA+E EVR RA QWD
Sbjct: 7   RHTCLKLEI--------PEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQWD 58

Query: 219 QSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNNRK 398
           Q VS YI+ AE++LGF+ PGS Y F DAG+G+KRLSWTFEK+G KLEWRWKC+PS + +K
Sbjct: 59  QPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKK 118

Query: 399 TSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEKFV 578
           T+  ILDFLMDANIRLSEEVVRKTQSFE LK EAEKCL++SEK  ++K EFE+AV+ KF+
Sbjct: 119 TTTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFL 178

Query: 579 AVLNSKNAKVRELRDRLSTQETNEKSPEAENSTERTESYDELTDDDKSEAKPTSNLTGTS 758
            VLNSK  K+RELRD+LS +E + +S +    +++TES+D  +DD+KS  KP   L GTS
Sbjct: 179 GVLNSKKRKLRELRDQLSKKEISGESAQEGEDSDKTESFDRGSDDEKSVEKPREKLAGTS 238

Query: 759 KSEPVTRQYTRKRKTQK 809
           K  P  R Y RK+ T K
Sbjct: 239 KDPPPRRGYVRKKITHK 255


>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
           subsp. vesca]
          Length = 259

 Score =  316 bits (809), Expect = 1e-83
 Identities = 163/258 (63%), Positives = 194/258 (75%), Gaps = 1/258 (0%)
 Frame = +3

Query: 39  RRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQWD 218
           R+SCLKLE  E         IFVKG WF S FDLSIT+GL+AWVC+ASE  VR+RA QWD
Sbjct: 10  RQSCLKLEPKESQP------IFVKGTWFHSRFDLSITDGLNAWVCHASEDAVRDRAAQWD 63

Query: 219 QSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNNRK 398
           Q V +Y+  AERYLGF+ P S Y F DAGDGHKRLSWTF+K+G KLEWRWKC+PS N+++
Sbjct: 64  QPVPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLEWRWKCEPSPNSKE 123

Query: 399 TSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEKFV 578
           T+AA+LDFLMDAN+ LSEEVVRKTQSFE LKVEAE CL +SE+IANEK EFESAV+ KF+
Sbjct: 124 TTAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSERIANEKIEFESAVYAKFL 183

Query: 579 AVLNSKNAKVRELRDRLSTQETNEKSPE-AENSTERTESYDELTDDDKSEAKPTSNLTGT 755
            VLNSK  K+RELRD+LS QE   K PE  E ST++TE+Y  ++DD+ SE     +   T
Sbjct: 184 GVLNSKKTKLRELRDKLSKQEAAGKLPEQEEESTDKTETY--VSDDENSEVDSLKDPPPT 241

Query: 756 SKSEPVTRQYTRKRKTQK 809
           SK  P +R   RKR  QK
Sbjct: 242 SKDIPSSRSQGRKRAFQK 259


>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
           tuberosum]
          Length = 267

 Score =  314 bits (804), Expect = 5e-83
 Identities = 162/267 (60%), Positives = 202/267 (75%), Gaps = 11/267 (4%)
 Frame = +3

Query: 33  SIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQ 212
           S + +CLKL ++ + +      IFVKG WF SHFDL IT+GL +W C+ASE EV ERA Q
Sbjct: 5   SPKHTCLKLVISNKEQ------IFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERASQ 58

Query: 213 WDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNN 392
           WDQ VSEYI+ AE+YLGF+QPGS+YGF DAG GHKRLSWTFEK+G KLEWRWKC+PSSN+
Sbjct: 59  WDQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPSSNS 118

Query: 393 RKTSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEK 572
           +KT+A ILDFLMDANIRLS+EVV KT+SFE +KVEAEKCL++SEK++ EKEEFESA++ K
Sbjct: 119 KKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESAIYAK 178

Query: 573 FVAVLNSKNAKVRELRDRLSTQETNEKSPEAEN--STERTESYDELTDDDKS------EA 728
           F+ VLNSK  K+RELRD+LS Q T  + P  E+  ST+RT+++DE +D++ S      E 
Sbjct: 179 FLGVLNSKKKKLRELRDKLSKQGTAVEEPVEEDAQSTDRTKTFDEGSDEEMSGEEVEKED 238

Query: 729 KPTSNL---TGTSKSEPVTRQYTRKRK 800
             TS+     GTSK  P  R   R RK
Sbjct: 239 VGTSSKKDDVGTSKDVPAGRGRGRGRK 265


>ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatula]
           gi|355479842|gb|AES61045.1| DNA repair protein XRCC4
           [Medicago truncatula]
          Length = 256

 Score =  312 bits (799), Expect = 2e-82
 Identities = 154/256 (60%), Positives = 194/256 (75%)
 Frame = +3

Query: 39  RRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQWD 218
           R +CLKL+LTE       + IFVKG WF++HF+LSIT+G  +W CNASE EV++RA QWD
Sbjct: 6   RHTCLKLQLTEE------ESIFVKGTWFNTHFNLSITDGSTSWHCNASEDEVKQRAAQWD 59

Query: 219 QSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNNRK 398
           Q V EY+E +ERYLGF+QP S Y F DAGD HKRLSWTFEK G+ L WRWKC  S + +K
Sbjct: 60  QPVEEYVELSERYLGFQQPESVYAFADAGDAHKRLSWTFEKGGMTLHWRWKCMKSPDCKK 119

Query: 399 TSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEKFV 578
           T+A ILDFLMDANIRLSEEVV KT+ FE  KVEAEKCL++SE+IANE+ EFES ++ KF+
Sbjct: 120 TTAEILDFLMDANIRLSEEVVIKTELFEKTKVEAEKCLAQSERIANERVEFESQIYTKFL 179

Query: 579 AVLNSKNAKVRELRDRLSTQETNEKSPEAENSTERTESYDELTDDDKSEAKPTSNLTGTS 758
            VLNSK AK+RELRD+LS Q   +KSP+ E   E+TES+DE +DD KS+  P   +T +S
Sbjct: 180 GVLNSKKAKLRELRDQLSKQGNGDKSPQEEEDPEKTESFDEESDDGKSDEDPQKCITSSS 239

Query: 759 KSEPVTRQYTRKRKTQ 806
           K    T++ +R R+T+
Sbjct: 240 KDAGATKR-SRPRRTR 254


>ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
           gi|508714034|gb|EOY05931.1| DNA ligase iv-binding
           protein XRCC4 isoform 2 [Theobroma cacao]
          Length = 276

 Score =  311 bits (797), Expect = 3e-82
 Identities = 165/282 (58%), Positives = 198/282 (70%), Gaps = 16/282 (5%)
 Frame = +3

Query: 12  LEASVMDSIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESE 191
           +E S   + R +CLKLE+         + IFVKG WFD+HFD+SIT+GL AWVCNA+E E
Sbjct: 1   METSSSSTTRHTCLKLEIPST------EPIFVKGTWFDAHFDISITDGLHAWVCNATEEE 54

Query: 192 VRERAEQWDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWK 371
           V+ERA QWDQ V+EYIE AERYLGF+Q GS Y F DAGD HKRLSW FEK+G KLEWRWK
Sbjct: 55  VKERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWK 114

Query: 372 CKPSSNNRKTSAAILDFLMDANIRLS-------------EEVVRKTQSFEMLKVEAEKCL 512
            +PS +++K +  ILDFLMDANIRLS             EEV RKTQSFE LKVEAEKCL
Sbjct: 115 FRPSPDSQKITGGILDFLMDANIRLSHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCL 174

Query: 513 SKSEKIANEKEEFESAVFEKFVAVLNSKNAKVRELRDRLSTQETNEKS-PEAENSTERTE 689
            +SE+  NEK EFES ++ KF+ VLNSK AK+RELRD+LS QET  K+  E E+ST++TE
Sbjct: 175 EQSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTE 234

Query: 690 SYDELTDDDKSEAKPTSNLTGTSKSEPVT--RQYTRKRKTQK 809
           SY   +D +  E +P  NLT T K  P    R   RKR T+K
Sbjct: 235 SYHTGSDAEGGEEEPEKNLTSTCKDVPAAAGRGRGRKRATRK 276


>ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
           gi|508714035|gb|EOY05932.1| DNA ligase iv-binding
           protein XRCC4 isoform 3 [Theobroma cacao]
          Length = 277

 Score =  311 bits (796), Expect = 4e-82
 Identities = 165/283 (58%), Positives = 198/283 (69%), Gaps = 17/283 (6%)
 Frame = +3

Query: 12  LEASVMDSIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESE 191
           +E S   + R +CLKLE+         + IFVKG WFD+HFD+SIT+GL AWVCNA+E E
Sbjct: 1   METSSSSTTRHTCLKLEIPST------EPIFVKGTWFDAHFDISITDGLHAWVCNATEEE 54

Query: 192 VRERAEQWDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWK 371
           V+ERA QWDQ V+EYIE AERYLGF+Q GS Y F DAGD HKRLSW FEK+G KLEWRWK
Sbjct: 55  VKERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWK 114

Query: 372 CKPSSNNRKTSAAILDFLMDANIRLS--------------EEVVRKTQSFEMLKVEAEKC 509
            +PS +++K +  ILDFLMDANIRLS              EEV RKTQSFE LKVEAEKC
Sbjct: 115 FRPSPDSQKITGGILDFLMDANIRLSKHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKC 174

Query: 510 LSKSEKIANEKEEFESAVFEKFVAVLNSKNAKVRELRDRLSTQETNEKS-PEAENSTERT 686
           L +SE+  NEK EFES ++ KF+ VLNSK AK+RELRD+LS QET  K+  E E+ST++T
Sbjct: 175 LEQSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKT 234

Query: 687 ESYDELTDDDKSEAKPTSNLTGTSKSEPVT--RQYTRKRKTQK 809
           ESY   +D +  E +P  NLT T K  P    R   RKR T+K
Sbjct: 235 ESYHTGSDAEGGEEEPEKNLTSTCKDVPAAAGRGRGRKRATRK 277


>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
           lycopersicum]
          Length = 254

 Score =  306 bits (785), Expect = 8e-81
 Identities = 155/258 (60%), Positives = 195/258 (75%), Gaps = 2/258 (0%)
 Frame = +3

Query: 33  SIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQ 212
           S + +CLKL ++ + +      IFVKG WF S+FDL IT+GL +W C+ASE EV ERA Q
Sbjct: 5   SPKHTCLKLVISNKEQ------IFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQ 58

Query: 213 WDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNN 392
           WDQ VSEYI+  E+YLGF+QPGS YGF DAG GHKRLSWTFEK+G KLEWRWKC+ SSN+
Sbjct: 59  WDQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNS 118

Query: 393 RKTSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEK 572
           +KT+A ILDFLMDANIRLS+EVV KT+SFE +KVEAEKCL++SEK++ EKEEFESA++ K
Sbjct: 119 KKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIYAK 178

Query: 573 FVAVLNSKNAKVRELRDRLSTQETNEKSPEAEN--STERTESYDELTDDDKSEAKPTSNL 746
           F+ VLN+K  K+RELRD+LS Q T+ + P  E+  ST+RTE++DE    ++ E     + 
Sbjct: 179 FLGVLNAKKKKLRELRDKLSKQATSVEEPVEEDAQSTDRTETFDEEISGEEVE----KDD 234

Query: 747 TGTSKSEPVTRQYTRKRK 800
            GTSK  P  R   R RK
Sbjct: 235 VGTSKDVPARRGRGRGRK 252


>gb|EYU32990.1| hypothetical protein MIMGU_mgv1a012190mg [Mimulus guttatus]
          Length = 259

 Score =  303 bits (777), Expect = 7e-80
 Identities = 155/260 (59%), Positives = 197/260 (75%), Gaps = 2/260 (0%)
 Frame = +3

Query: 27  MDSIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERA 206
           MD+ R +CLKL++   A G   + +FVKG W  + FDLSIT+GL AW C+A+E EV+ERA
Sbjct: 1   MDTPRHTCLKLDIRV-AGGGVAEPVFVKGTWHPTRFDLSITDGLHAWNCHATEEEVKERA 59

Query: 207 EQWDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSS 386
             WDQ+VS+Y++ AERYLGF+Q GS YGF DAG+G KRLSWTFEK+G KLEWRWKC+PSS
Sbjct: 60  SSWDQTVSDYLDLAERYLGFQQSGSVYGFSDAGNGSKRLSWTFEKEGTKLEWRWKCQPSS 119

Query: 387 NNRKTSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVF 566
           + +KT+A +LDFLMDANIRLSEEVV K QSF+ LK+EAEKCL++SEK+++EK EFES ++
Sbjct: 120 DCKKTTAQVLDFLMDANIRLSEEVVWKMQSFDTLKLEAEKCLAQSEKLSSEKSEFESEIY 179

Query: 567 EKFVAVLNSKNAKVRELRDRLSTQETNEKSPEAE--NSTERTESYDELTDDDKSEAKPTS 740
            KFV VLN+K AK+RELRDRLS Q T    PE E   ST++TES+DE TDDD+ +     
Sbjct: 180 GKFVNVLNTKKAKLRELRDRLSKQGTTHHLPEDEEDQSTDKTESFDEGTDDDEDDR--GK 237

Query: 741 NLTGTSKSEPVTRQYTRKRK 800
           N+  +SK    +    R RK
Sbjct: 238 NILDSSKDATRSASKPRGRK 257


>ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Cicer arietinum]
          Length = 255

 Score =  302 bits (773), Expect = 2e-79
 Identities = 151/256 (58%), Positives = 193/256 (75%)
 Frame = +3

Query: 39  RRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAEQWD 218
           R +CLKL++     GE+   IFVKG WFD+HF+LSIT+G  AW C ASE E+++RA QWD
Sbjct: 6   RHTCLKLQIN----GEE--AIFVKGTWFDTHFNLSITDGFTAWYCYASEEELKQRAAQWD 59

Query: 219 QSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSNNRK 398
           Q VSEY++ +E YLGF+Q GS Y F DAGDGHKRLSWTFEK G+ L WRWKC  S + +K
Sbjct: 60  QPVSEYVQLSESYLGFQQHGSIYAFADAGDGHKRLSWTFEKGGMTLHWRWKCMQSPDCKK 119

Query: 399 TSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFEKFV 578
           T+A ILDFLMDANIRLSEEVVRKT  FE  KVEAEKCL++SE+IANE+ +FES ++ KF+
Sbjct: 120 TTAQILDFLMDANIRLSEEVVRKTDLFEKTKVEAEKCLAQSERIANERVDFESQIYTKFL 179

Query: 579 AVLNSKNAKVRELRDRLSTQETNEKSPEAENSTERTESYDELTDDDKSEAKPTSNLTGTS 758
            VLNSK AK+RELRD+LS Q+  +KSP+ E  T++TES+DE +D+D S   P   +T +S
Sbjct: 180 GVLNSKKAKLRELRDQLSKQDNADKSPQ-EEDTDKTESFDEESDNDLSNEDPQKCITSSS 238

Query: 759 KSEPVTRQYTRKRKTQ 806
           K     +  +R R+T+
Sbjct: 239 KKVGANKP-SRSRRTK 253


>ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus]
           gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair
           protein XRCC4-like [Cucumis sativus]
          Length = 233

 Score =  293 bits (750), Expect = 9e-77
 Identities = 141/233 (60%), Positives = 183/233 (78%), Gaps = 1/233 (0%)
 Frame = +3

Query: 27  MDSIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERA 206
           MD+IR +CLKLE+   A+  +   IFVKG W    FDLSIT+G  AW C+A+E EVR RA
Sbjct: 1   MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRA 60

Query: 207 EQWDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSS 386
            QWDQ  S+Y+  AERYLGF+QPGS Y F DAG+G+KRLSWTF+K+G+KLEWRWKC+P+S
Sbjct: 61  AQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMKLEWRWKCQPAS 120

Query: 387 NNRKTSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVF 566
           +N+ T+A IL+FLMDANIRLSEEVVRK QS E LK E+EKCL++SEKI +EK EFE+A++
Sbjct: 121 DNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIY 180

Query: 567 EKFVAVLNSKNAKVRELRDRLSTQE-TNEKSPEAENSTERTESYDELTDDDKS 722
            KF+ VLN+K AK+RE RD+LS Q  T  K  + E S+++TES+D+ +D +K+
Sbjct: 181 AKFLNVLNAKKAKLREYRDQLSRQTITGSKLKQEEYSSDKTESFDDESDAEKN 233


>ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp.
           lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein
           ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  280 bits (715), Expect = 1e-72
 Identities = 135/245 (55%), Positives = 182/245 (74%)
 Frame = +3

Query: 30  DSIRRSCLKLELTERAEGEDPDVIFVKGIWFDSHFDLSITNGLDAWVCNASESEVRERAE 209
           +  + +CL+LE++    G DP  IFVKG W +SHFD+S+T+G  +W+CNA+E EV ERA 
Sbjct: 5   EKTKHTCLRLEIS----GADP--IFVKGTWHNSHFDISVTDGSSSWICNATEEEVAERAA 58

Query: 210 QWDQSVSEYIETAERYLGFRQPGSSYGFVDAGDGHKRLSWTFEKQGLKLEWRWKCKPSSN 389
           QWDQ VSEY+E AERYLGF+QP S YGF DA +G KRLSWTFEK+G KLEWRWKCKPS +
Sbjct: 59  QWDQPVSEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSHD 118

Query: 390 NRKTSAAILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLSKSEKIANEKEEFESAVFE 569
           ++K +  ILDFL++ANIRLSEEVV KT+SFE +K EAE+CL++ EK+  EK EFE+A + 
Sbjct: 119 SKKITVGILDFLLEANIRLSEEVVNKTRSFEKMKCEAERCLAQGEKLCEEKTEFENATYA 178

Query: 570 KFVAVLNSKNAKVRELRDRLSTQETNEKSPEAENSTERTESYDELTDDDKSEAKPTSNLT 749
           KF++VLN+K AK+R LRD+      + ++ E E ST++TES+D    D++   +  S   
Sbjct: 179 KFLSVLNAKKAKLRALRDK----GDSVRAVEEEESTDKTESFDSGRSDNEQSEEEASKKA 234

Query: 750 GTSKS 764
            +SK+
Sbjct: 235 SSSKA 239