BLASTX nr result
ID: Sinomenium21_contig00016441
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00016441
(2936 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca... 761 0.0
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp... 757 0.0
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera] 752 0.0
ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma ca... 733 0.0
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp... 734 0.0
ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun... 736 0.0
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr... 730 0.0
ref|XP_002517017.1| conserved hypothetical protein [Ricinus comm... 724 0.0
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp... 728 0.0
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr... 730 0.0
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu... 723 0.0
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp... 712 0.0
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp... 712 0.0
ref|XP_003590782.1| Chloroplastic group IIA intron splicing faci... 708 0.0
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp... 706 0.0
ref|XP_007144072.1| hypothetical protein PHAVU_007G126200g [Phas... 706 0.0
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp... 704 0.0
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp... 700 0.0
gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitat... 688 0.0
ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arab... 684 0.0
>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
1 [Theobroma cacao]
Length = 876
Score = 761 bits (1966), Expect(2) = 0.0
Identities = 407/675 (60%), Positives = 508/675 (75%), Gaps = 20/675 (2%)
Frame = +3
Query: 141 RTDSTKMEKIVEKLKRFGYAEEASETKE-------RVPGRKSLEHIFYAEEEGNSRNSQG 299
R+ S+ MEKIVEKLK+FGY E +E KE RV R S+E IFY EE G N++G
Sbjct: 128 RSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEE-GMLPNNRG 186
Query: 300 RFSIESPLEVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXX 467
FS ESPL + N +DGEVR P EK EEEG AR ++TSLA
Sbjct: 187 GFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAELTLPESELRRLR 246
Query: 468 XXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGG 647
++I +GVTQ +VD IHEKWKT E+VRLK +GA ALNMKRMHEILE+KTGG
Sbjct: 247 NLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILERKTGG 306
Query: 648 LVIWSSATSVSVYRGVSYELPSMQQENNLNQKTNANSDTM--ATDKTGRDSMEWFSVDDV 821
LVIW S TSVS+YRGVSYE+PS+ + ++ + + +DKT +D S DV
Sbjct: 307 LVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNETFTYALPSVSDKT-KDLSSLGSHKDV 365
Query: 822 --QQANVVQP----KELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVV 983
QAN K+ ESL E YE EV+KLL+G+GPRYT+WPG NPLPVDADLLPG+V
Sbjct: 366 VSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPLPVDADLLPGIV 425
Query: 984 SDYKPPFRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSS 1163
+ Y+PPFR+LPYGVRS+LG KEAT+LRRL +++PPHFAIGRSRQ QGLA+AM KLWE+SS
Sbjct: 426 AGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMIKLWEKSS 485
Query: 1164 IAKIALKRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXX 1343
IAKIALKRGVQ+TT +RMAEDIKK+TGG L+S KD++VF+RGK+FLS DV
Sbjct: 486 IAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSADVAEALVERER 545
Query: 1344 XXXXXQDEEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLR 1523
QDEEEQARLRAS+ ++P E+ E SGAAGTLGETL ADARWGKR+D++ + KV++
Sbjct: 546 LAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKRLDNHHKEKVMK 605
Query: 1524 AAQVARRANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFR 1700
A++ R AN VR+L++NLA A+RKL+KAER+L K+E YLKP + + +ITDEERFMFR
Sbjct: 606 EAEILRHANLVRKLDKNLAFADRKLLKAERALTKVEDYLKPADRQADPESITDEERFMFR 665
Query: 1701 KIGLRMNAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGG 1880
K+GLRM AFLLLGRRGVFDGT+E+MH+HWKYRELVKI++KAKT DQV+ +AL+LE ESGG
Sbjct: 666 KLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKTFDQVKKVALALEAESGG 725
Query: 1881 ILVSVDKISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALE 2060
+LVSVD+IS+G++II++RGK+Y++PS +RPKNLLTKR+ALARSIELQRREA+ H+SAL+
Sbjct: 726 VLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNLLTKRRALARSIELQRREALVKHVSALQ 785
Query: 2061 KTVDSLRSELDQMET 2105
VD +RSE+DQM +
Sbjct: 786 AKVDKIRSEIDQMHS 800
Score = 38.5 bits (88), Expect(2) = 0.0
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKDQNTKDEGHEKIYDV---------EVGKSIDNFHIIYKFP 2253
QGDEE +L S YPT D +T++EG E + E + I N H+ KFP
Sbjct: 804 QGDEEFYDRLDSSYPTDDDDTEEEGDEAYLETYESENDAEEENDELIHNLHLETKFP 860
>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Vitis vinifera]
gi|297737163|emb|CBI26364.3| unnamed protein product
[Vitis vinifera]
Length = 902
Score = 757 bits (1955), Expect(2) = 0.0
Identities = 398/667 (59%), Positives = 500/667 (74%), Gaps = 19/667 (2%)
Frame = +3
Query: 159 MEKIVEKLKRFGYAEEASETKERVPGR----KSLEHIFYAEEEGNSRNSQGRFSIESPLE 326
MEKIVEKLK+FGY ++ ETKE V R S+E IFY EE G N QG FS++SPL
Sbjct: 124 MEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEE-GILPNPQGGFSLDSPLG 182
Query: 327 VGNDLVTDGEVRVPLEKEEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESLKIG 506
V N +GEVR P E+ + R ++RTSLA KIG
Sbjct: 183 VENKGDGNGEVRFPWERPKVEEGSVRIKSRTSLAELTLPESELRRLRNLTMRTKNKTKIG 242
Query: 507 SSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWSSATSVSVY 686
GVTQA+VDMI EKWKT E+V+LKC+GA ALNM+R+HEILE+KTGGLVIW S TSVS+Y
Sbjct: 243 GGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGLVIWRSGTSVSLY 302
Query: 687 RGVSYELPSMQQENNLNQKTNA----------NSDTMATDKTGRDSMEWFSVDDVQQA-- 830
RGVSYE+P +Q + +K NS ++++KT ++ S +V +
Sbjct: 303 RGVSYEVP-VQLNKRVYKKNETSHSSFSSITPNSFAISSNKTSGNAPAVGSNQNVHASQA 361
Query: 831 --NVVQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYKPPF 1004
N+ + ++ +E +YE E++KLLDG+GPRYT+WPG +PLP+DADLLPG + Y+PPF
Sbjct: 362 TLNITDGENKDTESEVKYEDEIDKLLDGLGPRYTDWPGCDPLPIDADLLPGKIHGYQPPF 421
Query: 1005 RILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKIALK 1184
RILPYGVRS+LG KEAT LRRL +++PPHFA+GRSRQ +GLAMAM KLWERSSIAK+ALK
Sbjct: 422 RILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALK 481
Query: 1185 RGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXXXQD 1364
RGVQ+TT +RMAEDIKK+TGG L+S KD++VF+RGK+FLS DV QD
Sbjct: 482 RGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVTEALLERERLAKALQD 541
Query: 1365 EEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQVARR 1544
EEEQARLRAS+ + P V +TE G+AGTLGETL ADARWGKR+DD+D+ K+L+ A+VAR
Sbjct: 542 EEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDDHDKQKMLKKAEVARH 601
Query: 1545 ANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPP-EPRYSGNITDEERFMFRKIGLRMN 1721
AN VR+LE+ LA+AERKLMKAE +L+K+E +LKP P +ITDEERFMFRK+GLRM
Sbjct: 602 ANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFMFRKLGLRMK 661
Query: 1722 AFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVSVDK 1901
AFLLLGRRGVF GTVE+MH+HWKYRELVKI+VKAKT DQV+ AL+LE ESGG+LVSVDK
Sbjct: 662 AFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESESGGVLVSVDK 721
Query: 1902 ISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVDSLR 2081
+S+GF+I++FRGK+Y++PS +RPKNLLTKRKALARSIELQRREA+ +HISAL++ V+ LR
Sbjct: 722 VSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLR 781
Query: 2082 SELDQME 2102
SE++QM+
Sbjct: 782 SEIEQMD 788
Score = 38.5 bits (88), Expect(2) = 0.0
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Frame = +1
Query: 2113 GDEELKAKLYSMYPTKDQNTKDEGHEKIYDV---------EVGKSIDNFHIIYKFP 2253
GDEEL KL S Y T+D++T++EG E + E SI N HI FP
Sbjct: 794 GDEELYDKLDSAYATEDEHTEEEGDEAYLETYADENDGEHESDNSIHNHHIETNFP 849
>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
Length = 902
Score = 752 bits (1942), Expect(2) = 0.0
Identities = 396/667 (59%), Positives = 498/667 (74%), Gaps = 19/667 (2%)
Frame = +3
Query: 159 MEKIVEKLKRFGYAEEASETKERVPGR----KSLEHIFYAEEEGNSRNSQGRFSIESPLE 326
MEKIVEKLK+FGY ++ ETKE V R S+E IFY EE G N QG FS++SPL
Sbjct: 124 MEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEE-GILPNPQGGFSLDSPLG 182
Query: 327 VGNDLVTDGEVRVPLEKEEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESLKIG 506
V N +GEVR P E+ + R ++RTSLA KIG
Sbjct: 183 VENKGDGNGEVRFPWERPKVEEGSVRIKSRTSLAELTLPESELRRLRNLTMRTKNKTKIG 242
Query: 507 SSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWSSATSVSVY 686
GVTQA+VDMI EKWKT E+V+LKC+GA ALNM+R+HEILE+KTGGLVIW S TSVS+Y
Sbjct: 243 GGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGLVIWRSGTSVSLY 302
Query: 687 RGVSYELPSMQQENNLNQKTNA----------NSDTMATDKTGRDSMEWFSVDDVQQAN- 833
RGVSYE+P +Q + +K NS ++++KT ++ S +V +
Sbjct: 303 RGVSYEVP-VQLNKRVYKKNETSHSSFSSITPNSFAISSNKTSGNAPAVGSNQNVHASQA 361
Query: 834 ---VVQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYKPPF 1004
+ + ++ +E +YE E++KLLDG+GPRYT+WP +PLP+DADLLPG + Y+PPF
Sbjct: 362 TLXITDGENKDTESEVKYEDEIDKLLDGLGPRYTDWPXCDPLPIDADLLPGKIHGYQPPF 421
Query: 1005 RILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKIALK 1184
RILPYGVRS+LG KEAT LRRL +++PPHFA+GRSRQ +GLAMAM KLWERSSIAK+ALK
Sbjct: 422 RILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALK 481
Query: 1185 RGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXXXQD 1364
RGVQ+TT +RMAEDIKK+TGG L+S KD++VF+RGK+FLS DV QD
Sbjct: 482 RGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVTEALLERERLAKALQD 541
Query: 1365 EEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQVARR 1544
EEEQARLRAS+ + P V +TE G+AGTLGETL ADARWGKR+DD+D+ K+L+ A+VAR
Sbjct: 542 EEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDDHDKQKMLKKAEVARH 601
Query: 1545 ANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPP-EPRYSGNITDEERFMFRKIGLRMN 1721
AN VR+LE+ LA+AERKLMKAE +L+K+E +LKP P +ITDEERFMFRK+GLRM
Sbjct: 602 ANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFMFRKLGLRMK 661
Query: 1722 AFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVSVDK 1901
AFLLLGRRGVF GTVE+MH+HWKYRELVKI+VKAKT DQV+ AL+LE ESGG+LVSVDK
Sbjct: 662 AFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESESGGVLVSVDK 721
Query: 1902 ISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVDSLR 2081
+S+GF+I++FRGK+Y++PS +RPKNLLTKRKALARSIELQRREA+ +HISAL++ V+ LR
Sbjct: 722 VSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLR 781
Query: 2082 SELDQME 2102
SE++QM+
Sbjct: 782 SEIEQMD 788
Score = 38.5 bits (88), Expect(2) = 0.0
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Frame = +1
Query: 2113 GDEELKAKLYSMYPTKDQNTKDEGHEKIYDV---------EVGKSIDNFHIIYKFP 2253
GDEEL KL S Y T+D++T++EG E + E SI N HI FP
Sbjct: 794 GDEELYDKLDSAYATEDEHTEEEGDEAYLETYADENDGEHESDNSIHNHHIETNFP 849
>ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma cacao]
gi|508714005|gb|EOY05902.1| CRM family member 3A isoform
3 [Theobroma cacao]
Length = 856
Score = 733 bits (1893), Expect(2) = 0.0
Identities = 394/650 (60%), Positives = 489/650 (75%), Gaps = 20/650 (3%)
Frame = +3
Query: 141 RTDSTKMEKIVEKLKRFGYAEEASETKE-------RVPGRKSLEHIFYAEEEGNSRNSQG 299
R+ S+ MEKIVEKLK+FGY E +E KE RV R S+E IFY EE G N++G
Sbjct: 128 RSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEE-GMLPNNRG 186
Query: 300 RFSIESPLEVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXX 467
FS ESPL + N +DGEVR P EK EEEG AR ++TSLA
Sbjct: 187 GFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAELTLPESELRRLR 246
Query: 468 XXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGG 647
++I +GVTQ +VD IHEKWKT E+VRLK +GA ALNMKRMHEILE+KTGG
Sbjct: 247 NLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILERKTGG 306
Query: 648 LVIWSSATSVSVYRGVSYELPSMQQENNLNQKTNANSDTM--ATDKTGRDSMEWFSVDDV 821
LVIW S TSVS+YRGVSYE+PS+ + ++ + + +DKT +D S DV
Sbjct: 307 LVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNETFTYALPSVSDKT-KDLSSLGSHKDV 365
Query: 822 --QQANVVQP----KELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVV 983
QAN K+ ESL E YE EV+KLL+G+GPRYT+WPG NPLPVDADLLPG+V
Sbjct: 366 VSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPLPVDADLLPGIV 425
Query: 984 SDYKPPFRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSS 1163
+ Y+PPFR+LPYGVRS+LG KEAT+LRRL +++PPHFAIGRSRQ QGLA+AM KLWE+SS
Sbjct: 426 AGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMIKLWEKSS 485
Query: 1164 IAKIALKRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXX 1343
IAKIALKRGVQ+TT +RMAEDIKK+TGG L+S KD++VF+RGK+FLS DV
Sbjct: 486 IAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSADVAEALVERER 545
Query: 1344 XXXXXQDEEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLR 1523
QDEEEQARLRAS+ ++P E+ E SGAAGTLGETL ADARWGKR+D++ + KV++
Sbjct: 546 LAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKRLDNHHKEKVMK 605
Query: 1524 AAQVARRANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFR 1700
A++ R AN VR+L++NLA A+RKL+KAER+L K+E YLKP + + +ITDEERFMFR
Sbjct: 606 EAEILRHANLVRKLDKNLAFADRKLLKAERALTKVEDYLKPADRQADPESITDEERFMFR 665
Query: 1701 KIGLRMNAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGG 1880
K+GLRM AFLLLGRRGVFDGT+E+MH+HWKYRELVKI++KAKT DQV+ +AL+LE ESGG
Sbjct: 666 KLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKTFDQVKKVALALEAESGG 725
Query: 1881 ILVSVDKISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRRE 2030
+LVSVD+IS+G++II++RGK+Y++PS +RPKNLLTKR+ALARSIELQRRE
Sbjct: 726 VLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNLLTKRRALARSIELQRRE 775
Score = 38.5 bits (88), Expect(2) = 0.0
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKDQNTKDEGHEKIYDV---------EVGKSIDNFHIIYKFP 2253
QGDEE +L S YPT D +T++EG E + E + I N H+ KFP
Sbjct: 784 QGDEEFYDRLDSSYPTDDDDTEEEGDEAYLETYESENDAEEENDELIHNLHLETKFP 840
>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Citrus sinensis]
Length = 933
Score = 734 bits (1895), Expect(2) = 0.0
Identities = 389/690 (56%), Positives = 497/690 (72%), Gaps = 41/690 (5%)
Frame = +3
Query: 159 MEKIVEKLKRFGYA----------EEASETKERVPGRKSLEHIFYAEEEGNSRNSQGRFS 308
M KIVEKLK+FGY E + KERV + S+E IFY EE G N++G FS
Sbjct: 145 MGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEE-GLLPNARGGFS 203
Query: 309 IESPLEVGNDLVTDGEVRVPLEKEEE----GRNLARWRNRTSLAXXXXXXXXXXXXXXXX 476
ESPL +G ++ +DGEV+ P EK +E GR L + +RTSLA
Sbjct: 204 KESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRSSRTSLAELTLPESELRRLRNLT 263
Query: 477 XXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVI 656
+I +G+TQA+VD+IHEKWKT E+VRLK +GA ALNMKRMHEILE+KTGGLVI
Sbjct: 264 FQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVI 323
Query: 657 WSSATSVSVYRGVSYELPSMQQENNLNQKT---------------------NANSDTMAT 773
W S T+VS+YRGVSYE+PS+Q + ++ + NS + A
Sbjct: 324 WRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAA 383
Query: 774 DKTGRDSMEWFSVDDVQQANV-----VQPKELESLAETEYEYEVEKLLDGIGPRYTEWPG 938
DKT +D + S ++V V + +E + + E +YE EVEKLLDG+GPRYT+WPG
Sbjct: 384 DKTAQDPSNFDSYNNVHATQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPG 443
Query: 939 GNPLPVDADLLPGVVSDYKPPFRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQH 1118
+PLPVDAD+LPG+V Y+PPFR+LPYGVRSTL KEAT L+RL +++PPHFA+GRSRQ
Sbjct: 444 CDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQL 503
Query: 1119 QGLAMAMAKLWERSSIAKIALKRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKD 1298
QGLA+AM KLWE+SSIAKIALKRGVQ+TT +RM EDIKK+TGGTL+S KD++VF+RGK+
Sbjct: 504 QGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKN 563
Query: 1299 FLSPDVXXXXXXXXXXXXXXQDEEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADAR 1478
FLSPDV QDEEEQARLRAS+ V+P +E E SG AGTL ETL A++R
Sbjct: 564 FLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSR 623
Query: 1479 WGKRIDDNDRNKVLRAAQVARRANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPR 1658
WGKR+DD+ + ++R A+V R A V++LE+ LA AERKL++AER+L+K+E LKP E +
Sbjct: 624 WGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQ 683
Query: 1659 YS-GNITDEERFMFRKIGLRMNAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLD 1835
+ITDEERFMFRK+GLRM AFLLLGRRGVFDGTVE+MH+HWKYRELVKI+VK KT D
Sbjct: 684 ADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFD 743
Query: 1836 QVRNIALSLEVESGGILVSVDKISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIE 2015
Q + IAL+LE ESGG+LVSVDKIS+G++++++RGK+Y++PS +RPKNLLTKRKALARSIE
Sbjct: 744 QAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIE 803
Query: 2016 LQRREAICSHISALEKTVDSLRSELDQMET 2105
LQR+EA+ H++ LE LRSE++QM +
Sbjct: 804 LQRQEALLKHVATLESNAGRLRSEIEQMNS 833
Score = 33.1 bits (74), Expect(2) = 0.0
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 2113 GDEELKAKLYSMYPTKDQNTKDEGHEKIYDVEVG 2214
GDE+L KL S Y T+D +++DEG E ++ G
Sbjct: 838 GDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAG 871
>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
gi|462423956|gb|EMJ28219.1| hypothetical protein
PRUPE_ppa001134mg [Prunus persica]
Length = 899
Score = 736 bits (1901), Expect(2) = 0.0
Identities = 392/671 (58%), Positives = 501/671 (74%), Gaps = 17/671 (2%)
Frame = +3
Query: 144 TDSTKMEKIVEKLKRFGYAEEASETK----ERVPGRKSLEHIFYAEEEGNSRNSQGRFSI 311
+ + MEKIVEKLK+FGY ++++E K + V + S+E IFY EE G NS+G FS
Sbjct: 136 SSGSTMEKIVEKLKKFGYVDDSNENKGEVRDSVIEKGSVEDIFYIEE-GMLPNSRGGFSE 194
Query: 312 ESPLEVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXX 479
ESPL + N DG+VR P EK E++ R ++RTSLA
Sbjct: 195 ESPLGIENVFGGDGKVRFPWEKPKEEEKQEEGSVRRKSRTSLAELTLPESELRRLTNLTF 254
Query: 480 XXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIW 659
+IG GVTQA+V+MIHE+WKT E+VRLK +G ALNMKRMHEILE+KTGGLVIW
Sbjct: 255 QKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRLKIEGPPALNMKRMHEILERKTGGLVIW 314
Query: 660 SSATSVSVYRGVSYELPSMQQENNLNQKTNANSDTMAT--DKTGRDSMEWFSVDDVQ--- 824
S TS+S+YRGVSYE+PS++ + +K + +S + T DK+ D E S +V+
Sbjct: 315 RSGTSLSLYRGVSYEVPSVKLNKRIYKKNDISSAPLPTVADKSVGDFAELASYSNVKTPQ 374
Query: 825 --QANVVQPKE-LESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYK 995
N Q KE E LAE +YE EV+KLLD +GPR+ +WPG +PLPVDAD+LPG+V Y+
Sbjct: 375 EKSENTSQEKEDTEQLAEVKYEDEVDKLLDSLGPRFKDWPGCDPLPVDADMLPGIVPGYQ 434
Query: 996 PPFRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKI 1175
PPFR+LPYGVRSTLG KEAT+LRRL +++PPHFA+GRSRQ QGLA+AMAKLWE+S IAKI
Sbjct: 435 PPFRVLPYGVRSTLGLKEATSLRRLARVLPPHFALGRSRQLQGLAVAMAKLWEKSLIAKI 494
Query: 1176 ALKRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXX 1355
ALKRGVQ+TT +RMAEDIK++TGG ++S KD++VF+RGK+FLSPDV
Sbjct: 495 ALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDFLVFYRGKNFLSPDVTEALLERERLAKS 554
Query: 1356 XQDEEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQV 1535
QDEEEQARLRAS+ IP VE+ + G AGTLGETL ADA+WGKR+ D+ KV+R A +
Sbjct: 555 LQDEEEQARLRASAMFIPNVEVAQHFGTAGTLGETLDADAKWGKRL---DKEKVMREADI 611
Query: 1536 ARRANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIGL 1712
R A+ VR+LE+ L+ AERKLM+AE++L+K+E LKP + + +ITDEERFMFRK+GL
Sbjct: 612 LRHAHLVRKLERKLSFAERKLMRAEQALSKVEESLKPSKQQADPESITDEERFMFRKLGL 671
Query: 1713 RMNAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVS 1892
RM AFLLLGRRGVFDGTVE+MH+HWKYRELVKI+V AKT +QV+NIAL+LE ESGG+LVS
Sbjct: 672 RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKTFEQVKNIALALEAESGGVLVS 731
Query: 1893 VDKISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVD 2072
VDK+S+ F+II++RGK+Y +PS +RPKNLLTKRKALARSIELQR+EA+ HISA++ VD
Sbjct: 732 VDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIELQRQEALLKHISAVQSKVD 791
Query: 2073 SLRSELDQMET 2105
+LRSE++QM++
Sbjct: 792 TLRSEIEQMDS 802
Score = 28.1 bits (61), Expect(2) = 0.0
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKDQNTKD 2178
QGDE L KL S YPT D+++++
Sbjct: 806 QGDEALYNKLDSSYPTDDEDSEE 828
>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
gi|557521988|gb|ESR33355.1| hypothetical protein
CICLE_v10004262mg [Citrus clementina]
Length = 934
Score = 730 bits (1884), Expect(2) = 0.0
Identities = 387/691 (56%), Positives = 495/691 (71%), Gaps = 42/691 (6%)
Frame = +3
Query: 159 MEKIVEKLKRFGYA----------EEASETKERVPGRKSLEHIFYAEEEGNSRNSQGRFS 308
M KIVEKLK+FGY E + KERV + S+E IFY EE G N++G FS
Sbjct: 145 MGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEE-GLLPNARGGFS 203
Query: 309 IESPLEVGNDLVTDGEVRVPLEKEEEGRNLARW-----RNRTSLAXXXXXXXXXXXXXXX 473
ESPL +G ++ +DGEV+ P EK +E RW +RTSLA
Sbjct: 204 KESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNL 263
Query: 474 XXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLV 653
+I +G+TQA+VD+IHEKWKT E+VRLK +GA ALNMKRMHEILE+KTGGLV
Sbjct: 264 TFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLV 323
Query: 654 IWSSATSVSVYRGVSYELPSMQQENNLNQKT---------------------NANSDTMA 770
IW S T+VS+YRGVSYE+PS+Q + ++ + NS + A
Sbjct: 324 IWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAA 383
Query: 771 TDKTGRDSMEWFSVDDVQQANV-----VQPKELESLAETEYEYEVEKLLDGIGPRYTEWP 935
DKT +D + S ++V V + +E + + E +YE EVEKLLDG+GPRYT+WP
Sbjct: 384 ADKTAQDPSNFDSYNNVHVTQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWP 443
Query: 936 GGNPLPVDADLLPGVVSDYKPPFRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQ 1115
G +PLPVDAD+LPG+V Y+PPFR+LPYGVRSTL KEAT L+RL +++PPHFA+GRSRQ
Sbjct: 444 GCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQ 503
Query: 1116 HQGLAMAMAKLWERSSIAKIALKRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGK 1295
QGLA+AM KLWE+SSIAKIALKRGVQ+TT +RM EDIKK+TGGTL+S KD++VF+RGK
Sbjct: 504 LQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGK 563
Query: 1296 DFLSPDVXXXXXXXXXXXXXXQDEEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADA 1475
+FLSPDV QDEEEQARLRAS+ V+P +E E SG AGTL ETL A++
Sbjct: 564 NFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANS 623
Query: 1476 RWGKRIDDNDRNKVLRAAQVARRANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEP 1655
RWGKR+DD+ + ++R A+V R A V++LE+ LA AERKL++AER+L+K+E LKP E
Sbjct: 624 RWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAER 683
Query: 1656 RYS-GNITDEERFMFRKIGLRMNAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTL 1832
+ +IT+EERFMFRK+GLRM AFLLLGRRGVFDGTVE+MH+HWKYRELVKI+VK KT
Sbjct: 684 QADPESITNEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTF 743
Query: 1833 DQVRNIALSLEVESGGILVSVDKISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSI 2012
DQ + IAL+LE ESGG+LVSVDKIS+G++++++RGK+Y++PS +RPKNLLTKRKALARSI
Sbjct: 744 DQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSI 803
Query: 2013 ELQRREAICSHISALEKTVDSLRSELDQMET 2105
ELQR+EA+ H++ LE LRSE++QM +
Sbjct: 804 ELQRQEALLKHVATLESNAGRLRSEIEQMNS 834
Score = 33.1 bits (74), Expect(2) = 0.0
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 2113 GDEELKAKLYSMYPTKDQNTKDEGHEKIYDVEVG 2214
GDE+L KL S Y T+D +++DEG E ++ G
Sbjct: 839 GDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAG 872
>ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
gi|223543652|gb|EEF45180.1| conserved hypothetical
protein [Ricinus communis]
Length = 773
Score = 724 bits (1868), Expect(2) = 0.0
Identities = 382/670 (57%), Positives = 488/670 (72%), Gaps = 22/670 (3%)
Frame = +3
Query: 159 MEKIVEKLKRFGYAE------EASETKERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESP 320
MEKIVEKLK+ GY + + +T ERV + S+E IFY EE GN NS+G FS ESP
Sbjct: 1 MEKIVEKLKKHGYIDGNVDEKKKEKTLERVIQKGSVEDIFYVEE-GNLPNSRGGFSKESP 59
Query: 321 LEVGNDLVTDGEVRVPLEK------EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXX 482
L V + ++GEVR P EK E E + AR ++RT LA
Sbjct: 60 LGVEDVFKSNGEVRFPWEKPKREELEHEKKWTARSKSRTQLAELTLPESELRRLRNLTYQ 119
Query: 483 XDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWS 662
+++ +GVTQ +VD IH++WKT E+VR+K +GA ALNM+RMHEILE+KTGGLVIW
Sbjct: 120 IKSKVRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWR 179
Query: 663 SATSVSVYRGVSYELPSMQQENNLNQKTNANSDTMAT---------DKTGRDSMEWFSVD 815
S TSVS+YRGVSYE PS+Q + ++ ++++++T + ++
Sbjct: 180 SGTSVSLYRGVSYEDPSVQLNKQILKRNELSNNSLSTATGIIRSPSKSAASSDLNMPHLN 239
Query: 816 DVQQANVVQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYK 995
A + KE+E E +YE EV+KLL+G+GPRYT+W G +PLPVDAD+LPG++ Y+
Sbjct: 240 SDSTAEGEEKKEIEMETEVKYEDEVDKLLEGLGPRYTDWAGLDPLPVDADMLPGIIPGYQ 299
Query: 996 PPFRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKI 1175
PPFRILPYGVRS+LG KEAT+LRRL +I+PPHFA+GRSRQ QGLA AM KLWE+SSIAKI
Sbjct: 300 PPFRILPYGVRSSLGQKEATSLRRLARILPPHFALGRSRQLQGLADAMIKLWEKSSIAKI 359
Query: 1176 ALKRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXX 1355
+LKRGVQ+TT +RMAEDIKK+TGG L+S KD++VF+RGKDFLSP+V
Sbjct: 360 SLKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVTEALVERERLAQS 419
Query: 1356 XQDEEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQV 1535
QD+EEQARLRAS+ + E E G AGTL ETL ADARWGK +D N R K++R A++
Sbjct: 420 LQDKEEQARLRASALFVQTAETLEQPGTAGTLEETLDADARWGKCLDQNHREKIMREAEI 479
Query: 1536 ARRANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIGL 1712
AR AN VR+LE LA AE+KLMKAER+L+K+E +LKP E + +ITDEERFMFRK+GL
Sbjct: 480 ARHANLVRKLESKLAFAEKKLMKAERALSKVEVFLKPAERQADPESITDEERFMFRKLGL 539
Query: 1713 RMNAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVS 1892
RM AFLLLGRRGVFDGTVE+MH+HWKYRELVKI++KAK ++QV+ IAL+LE ESGGILVS
Sbjct: 540 RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKNIEQVKKIALALEAESGGILVS 599
Query: 1893 VDKISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVD 2072
VD++S+G++II+FRGK+Y++PS +RP NLLTKRKALARSIE+QR EA+ HISAL+K VD
Sbjct: 600 VDRVSKGYAIIVFRGKDYQRPSKLRPGNLLTKRKALARSIEIQRSEALLKHISALQKKVD 659
Query: 2073 SLRSELDQME 2102
+R E+ QME
Sbjct: 660 KIRYEIAQME 669
Score = 37.7 bits (86), Expect(2) = 0.0
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKDQNTKDEGHEKIYDVEVGKSIDNFHIIYKFPL**PPTQSHETC 2289
QGDEEL +L + YPT D +T++E E + K N
Sbjct: 674 QGDEELYDRLDATYPTDDDDTEEEEDEAYLGAYISKGDAN-------------------- 713
Query: 2290 LETYDDDRSNSIYNLLSK*NFLYDEQHEW*GTDCEASV 2403
DD+ ++++ + LYD QH+ T+ E S+
Sbjct: 714 -SAADDETGGIVHSVRLETGNLYDVQHQESETESEVSI 750
>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Glycine max]
Length = 835
Score = 728 bits (1880), Expect(2) = 0.0
Identities = 382/665 (57%), Positives = 486/665 (73%), Gaps = 12/665 (1%)
Frame = +3
Query: 144 TDSTKMEKIVEKLKRFGYAEEASETKERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPL 323
T + M++IVEKLK+FGY E+ + KERV + S+E IFY EE G NS+G FS ESPL
Sbjct: 110 TGGSTMDRIVEKLKKFGYVEDGIQNKERVIEKGSVEDIFYVEE-GMLPNSRGGFSSESPL 168
Query: 324 EVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDE 491
G+ D EVR P EK E E R R R++TSLA
Sbjct: 169 GFGSFGSDDREVRFPWEKPVVEELEERKSMRSRSKTSLAELTLPESELKRLLKLTFEKKH 228
Query: 492 SLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWSSAT 671
+IG SGVTQA+VD IHE+WKT E+VRLK +G ALNMKRMHEILE+KTGGLVIW S
Sbjct: 229 KTRIGRSGVTQAVVDKIHERWKTSEIVRLKFEGEAALNMKRMHEILERKTGGLVIWRSGN 288
Query: 672 SVSVYRGVSYELPSMQQENNLNQKTNANSDTMAT-------DKTGRDSMEWFSVDDVQQA 830
SVS+YRGVSYE+PS+QQ + +K+ +S + T + + S S +
Sbjct: 289 SVSLYRGVSYEVPSVQQNKKIYRKSENSSKLLPTPSYNSVGNPSDIASNSGTSAPLAKLE 348
Query: 831 NVVQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYKPPFRI 1010
+ KE + L + YE+EV+KLLDG+GPRYT+WPG +PLPVDAD+LP V Y+PPFR+
Sbjct: 349 STNDEKERDYLPKVNYEHEVDKLLDGLGPRYTDWPGCDPLPVDADMLPVTVPGYQPPFRV 408
Query: 1011 LPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKIALKRG 1190
LP+GVR+TLG +EAT LRR+ + +PPHFA+GR+RQ QGLA+AM KLWE SSIAK+ALKRG
Sbjct: 409 LPFGVRATLGLREATALRRIARTLPPHFALGRNRQLQGLAVAMIKLWEISSIAKVALKRG 468
Query: 1191 VQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXXXQDEE 1370
VQ+TT +RMAE+IKK+TGG L+S KD++VFFRGK+FLS DV QDEE
Sbjct: 469 VQLTTSERMAEEIKKLTGGILLSRNKDFLVFFRGKNFLSADVTQALLERERMAKVMQDEE 528
Query: 1371 EQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQVARRAN 1550
EQARLRASS +IP +E+S AGTLGETL ADA+WGK +D+ + K++R + R AN
Sbjct: 529 EQARLRASSLLIPTNNTSELSAEAGTLGETLDADAKWGKTLDERHKQKIMREVEQLRHAN 588
Query: 1551 FVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIGLRMNAF 1727
V++LEQ L+ AERKL +AE++L K+E++LKP E + +ITDEERFMFRK+GLRM AF
Sbjct: 589 LVKKLEQKLSFAERKLRRAEKALMKVESFLKPSEYKADPESITDEERFMFRKLGLRMKAF 648
Query: 1728 LLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVSVDKIS 1907
LLLGRRGVFDGT+E+MH+HWKYRELVKI+VKAKT +QV+ IAL+LE ESGG+LVSVDK+S
Sbjct: 649 LLLGRRGVFDGTIENMHLHWKYRELVKIIVKAKTFEQVKKIALALEAESGGVLVSVDKVS 708
Query: 1908 EGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVDSLRSE 2087
+G+S+I++RGK+Y++PS +RPKNLLTKRKALARSIELQR EA+ +HIS L+ V +RSE
Sbjct: 709 KGYSVIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRHEALMNHISTLQSKVGRIRSE 768
Query: 2088 LDQME 2102
++QME
Sbjct: 769 IEQME 773
Score = 30.0 bits (66), Expect(2) = 0.0
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKDQNTK-------DEGHEKIYDVEVGKSIDN 2229
+GDE L KL S YP+ D+N++ DE + K Y+ E I++
Sbjct: 778 KGDEALYDKLDSAYPSDDENSEVEDGEQGDEAYLKTYNSENDSEIES 824
>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
gi|557521987|gb|ESR33354.1| hypothetical protein
CICLE_v10004262mg [Citrus clementina]
Length = 860
Score = 730 bits (1884), Expect = 0.0
Identities = 387/691 (56%), Positives = 495/691 (71%), Gaps = 42/691 (6%)
Frame = +3
Query: 159 MEKIVEKLKRFGYA----------EEASETKERVPGRKSLEHIFYAEEEGNSRNSQGRFS 308
M KIVEKLK+FGY E + KERV + S+E IFY EE G N++G FS
Sbjct: 145 MGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEE-GLLPNARGGFS 203
Query: 309 IESPLEVGNDLVTDGEVRVPLEKEEEGRNLARW-----RNRTSLAXXXXXXXXXXXXXXX 473
ESPL +G ++ +DGEV+ P EK +E RW +RTSLA
Sbjct: 204 KESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNL 263
Query: 474 XXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLV 653
+I +G+TQA+VD+IHEKWKT E+VRLK +GA ALNMKRMHEILE+KTGGLV
Sbjct: 264 TFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLV 323
Query: 654 IWSSATSVSVYRGVSYELPSMQQENNLNQKT---------------------NANSDTMA 770
IW S T+VS+YRGVSYE+PS+Q + ++ + NS + A
Sbjct: 324 IWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAA 383
Query: 771 TDKTGRDSMEWFSVDDVQQANV-----VQPKELESLAETEYEYEVEKLLDGIGPRYTEWP 935
DKT +D + S ++V V + +E + + E +YE EVEKLLDG+GPRYT+WP
Sbjct: 384 ADKTAQDPSNFDSYNNVHVTQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWP 443
Query: 936 GGNPLPVDADLLPGVVSDYKPPFRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQ 1115
G +PLPVDAD+LPG+V Y+PPFR+LPYGVRSTL KEAT L+RL +++PPHFA+GRSRQ
Sbjct: 444 GCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQ 503
Query: 1116 HQGLAMAMAKLWERSSIAKIALKRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGK 1295
QGLA+AM KLWE+SSIAKIALKRGVQ+TT +RM EDIKK+TGGTL+S KD++VF+RGK
Sbjct: 504 LQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGK 563
Query: 1296 DFLSPDVXXXXXXXXXXXXXXQDEEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADA 1475
+FLSPDV QDEEEQARLRAS+ V+P +E E SG AGTL ETL A++
Sbjct: 564 NFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANS 623
Query: 1476 RWGKRIDDNDRNKVLRAAQVARRANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEP 1655
RWGKR+DD+ + ++R A+V R A V++LE+ LA AERKL++AER+L+K+E LKP E
Sbjct: 624 RWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAER 683
Query: 1656 RYS-GNITDEERFMFRKIGLRMNAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTL 1832
+ +IT+EERFMFRK+GLRM AFLLLGRRGVFDGTVE+MH+HWKYRELVKI+VK KT
Sbjct: 684 QADPESITNEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTF 743
Query: 1833 DQVRNIALSLEVESGGILVSVDKISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSI 2012
DQ + IAL+LE ESGG+LVSVDKIS+G++++++RGK+Y++PS +RPKNLLTKRKALARSI
Sbjct: 744 DQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSI 803
Query: 2013 ELQRREAICSHISALEKTVDSLRSELDQMET 2105
ELQR+EA+ H++ LE LRSE++QM +
Sbjct: 804 ELQRQEALLKHVATLESNAGRLRSEIEQMNS 834
>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
gi|222864769|gb|EEF01900.1| hypothetical protein
POPTR_0010s08770g [Populus trichocarpa]
Length = 894
Score = 723 bits (1867), Expect(2) = 0.0
Identities = 383/667 (57%), Positives = 492/667 (73%), Gaps = 20/667 (2%)
Frame = +3
Query: 159 MEKIVEKLKRFGYAE-EASETKERVPGRK----SLEHIFYAEEEGNSRNSQGRFSIESPL 323
MEKIVEKLK+ GY + + +E KER+ R S+E IFY EE G N++G FS ESPL
Sbjct: 111 MEKIVEKLKKHGYMDGDVNENKERMQERVIEKGSVEDIFYVEE-GMLPNARGGFSKESPL 169
Query: 324 EVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDE 491
V + +DGEVR P EK E+EG+ AR ++RTSLA
Sbjct: 170 GVEDVFRSDGEVRFPWEKPKKEEDEGKWTARSKSRTSLAELTLPESELRRLRNLTYGTKS 229
Query: 492 SLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWSSAT 671
++G GVTQ +VD IH+KWKT E+ R+K +GA ALNMKRMHEILE KTGGLVIW S
Sbjct: 230 KTRVGGRGVTQEVVDAIHDKWKTSEIARVKVEGAPALNMKRMHEILENKTGGLVIWRSGA 289
Query: 672 SVSVYRGVSYELPSMQ--------QENNLNQKTNANSDTMATDKTGRDSMEWFSVDDVQQ 827
+VS+YRGVSYE P+++ +E + N A S T+ + E + +
Sbjct: 290 TVSLYRGVSYEDPALKWKKRIFKKKETSSNSLPAATSITIGSQSKNSPDNEIHAPRPKTE 349
Query: 828 ANV--VQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYKPP 1001
NV KE ++ + +YE EV+KLLDG+GPRYT+WPG +PLPVDAD+LPGV+ Y+PP
Sbjct: 350 INVEAANQKETKTQTDVKYEDEVDKLLDGLGPRYTDWPGLDPLPVDADMLPGVIPGYQPP 409
Query: 1002 FRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKIAL 1181
FRILPYGVR TLG +++T+LRRL +++PPHFA+GRSRQ QGLA+AM KLWE+SSI K+AL
Sbjct: 410 FRILPYGVRPTLGRQDSTSLRRLARVLPPHFAVGRSRQLQGLAVAMIKLWEKSSIVKVAL 469
Query: 1182 KRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXXXQ 1361
KRGVQ+TT +RMAEDIKK+TGG L+S KD++VF+RGKDFLSP+V Q
Sbjct: 470 KRGVQLTTSERMAEDIKKLTGGLLLSRNKDFLVFYRGKDFLSPEVSEALLERERLAKSLQ 529
Query: 1362 DEEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQVAR 1541
DEEEQARLRAS+ VIP E+ E SG AG+L ETL ADA+WGKR+DD + K++R A++ R
Sbjct: 530 DEEEQARLRASALVIPSDEIMEESGIAGSLEETLDADAKWGKRLDDCHKEKIIREAEIVR 589
Query: 1542 RANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIGLRM 1718
A+ VRRLE+ LA A+RKL +AER+L K+E +LKP E + +ITDEERFMFRK+GLRM
Sbjct: 590 HASIVRRLEKKLAFAQRKLRRAERTLNKVEGFLKPSERQADPESITDEERFMFRKLGLRM 649
Query: 1719 NAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVSVD 1898
AFLLLGRRGVFDGTVE+MH+HWKYRELVKI++KAK+ +QV+ IAL+LE ESGG+LVSVD
Sbjct: 650 KAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKSFEQVKKIALALEAESGGVLVSVD 709
Query: 1899 KISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVDSL 2078
KIS+G++II++RGK+Y++PS++RPKNLLTKRKALARSIE+QR EA+ +H+SALE V+ +
Sbjct: 710 KISKGYAIIVYRGKDYQRPSMLRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEKI 769
Query: 2079 RSELDQM 2099
RSE++QM
Sbjct: 770 RSEIEQM 776
Score = 28.1 bits (61), Expect(2) = 0.0
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 13/56 (23%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKD--QNTKDEGHEKI-----------YDVEVGKSIDNFHI 2238
+GDEEL +L S Y T D +++DEG E YD E ++ N H+
Sbjct: 782 KGDEELYDRLDSAYLTDDDADDSEDEGDEAYLETYNSENDVDYDDETDSTVHNAHL 837
>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 852
Score = 712 bits (1837), Expect(2) = 0.0
Identities = 404/767 (52%), Positives = 519/767 (67%), Gaps = 66/767 (8%)
Frame = +3
Query: 3 HLQISRHGLSISFRKYDFCVAHNAISSGSAPEKYPPGNSSFV---FKTTRT--------- 146
H + R+ SI F+K F I+S PE+ PP + + +K T+
Sbjct: 26 HFHLFRYS-SIPFKKQSFHATQYFITSSLTPEQNPPRKLNLLICQYKPTKNLSSCSWIDR 84
Query: 147 --DSTK-------------------------------MEKIVEKLKRFGYAEE-----AS 212
DS K M+KIVEKLK+FGY E
Sbjct: 85 WNDSRKQHGPRRPRAVLDYQSNESGNLSSDGNDGGSTMDKIVEKLKKFGYIAEDKNEGRG 144
Query: 213 ETKERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPLEVGNDLVTDG--EVRVPLEK--- 377
E +ERV + S+E IFY EE G NS+G FS SPL D+ DG EVR P EK
Sbjct: 145 EVRERVIEKGSVEDIFYVEE-GMLPNSRGGFSGVSPLGT-EDVFGDGGGEVRFPWEKPRE 202
Query: 378 --EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESLKIGSSGVTQAIVDMIHEK 551
+EEG ++ R R+RTSLA KIG +GVTQA+V+MIHE+
Sbjct: 203 REKEEGGSIRR-RSRTSLAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVEMIHER 261
Query: 552 WKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWSSATSVSVYRGVSYELPSMQQENN 731
WKT E+VRLK +G ALNMKRMHEILE+KTGGLV+W S TS+S+YRGVSYE+PS+Q
Sbjct: 262 WKTAEIVRLKIEGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKQ 321
Query: 732 LNQKTNANSDTMAT--DKTGRDSMEWFSVDDVQ-----QANVVQPKE-LESLAETEYEYE 887
+ ++ +S ++ T DK+ + + +V+ N Q E E L E +YE E
Sbjct: 322 IFKRNEISSTSLPTVADKSVAEPYVCATYSNVKTPLEMSENASQETEDTEQLPEVKYEDE 381
Query: 888 VEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYKPPFRILPYGVRSTLGNKEATTLRR 1067
V++LLD IGPR+ +WPG +PLPVDAD+LPG+V ++PPFRILPYGVRSTLG KEAT+LRR
Sbjct: 382 VDELLDSIGPRFKDWPGCDPLPVDADMLPGIVPGFQPPFRILPYGVRSTLGLKEATSLRR 441
Query: 1068 LGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKIALKRGVQVTTIDRMAEDIKKVTGG 1247
L +++PPHFA+GR+RQ QGLA+AM+KLWERS IAKIALKRGVQ+TT +RMAEDIKK+TGG
Sbjct: 442 LARVLPPHFALGRNRQLQGLAVAMSKLWERSLIAKIALKRGVQLTTSERMAEDIKKLTGG 501
Query: 1248 TLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXXXQDEEEQARLRASSSVIPVVEMTE 1427
L+S KD++VF+RGK+FLS +V QDEEEQARLRAS+ V+P +E +
Sbjct: 502 VLLSRNKDFLVFYRGKNFLSAEVTEALVERERLAKSLQDEEEQARLRASAMVMPSIEPAQ 561
Query: 1428 VSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQVARRANFVRRLEQNLAIAERKLMKA 1607
G AGTLGETL ADA+WGKR+D + + KV + A + R A VR+LEQ LA AERKLM A
Sbjct: 562 HFGTAGTLGETLDADAKWGKRLDVHHKEKVTQEAGILRHAKLVRKLEQKLAFAERKLMGA 621
Query: 1608 ERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIGLRMNAFLLLGRRGVFDGTVESMHMH 1784
E++L+K+E LKP + + +ITDEERFMFRK+GL+M AFLLLGRRGVFDGTVE+MH+H
Sbjct: 622 EQALSKVEESLKPSKQQADPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLH 681
Query: 1785 WKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVSVDKISEGFSIILFRGKEYKQPSVM 1964
WKYRELVKI+V AK DQV+ IAL+LE ESGG+LVSVDK+S+ ++II++RG +Y++PS++
Sbjct: 682 WKYRELVKIMVNAKNFDQVKKIALALEAESGGVLVSVDKVSKKYAIIVYRGNDYQRPSML 741
Query: 1965 RPKNLLTKRKALARSIELQRREAICSHISALEKTVDSLRSELDQMET 2105
RPKNLLTKRKALARSIELQR+EA+ HI+A++ VD LRSE++QM+T
Sbjct: 742 RPKNLLTKRKALARSIELQRQEALLKHIAAVQSRVDRLRSEIEQMDT 788
Score = 28.5 bits (62), Expect(2) = 0.0
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 2113 GDEELKAKLYSMYPTKDQNTKDEG 2184
GDE L KL S YPT ++T++EG
Sbjct: 793 GDEALYNKLDSCYPTDYEDTEEEG 816
>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Cicer arietinum]
Length = 838
Score = 712 bits (1839), Expect(2) = 0.0
Identities = 381/672 (56%), Positives = 485/672 (72%), Gaps = 24/672 (3%)
Frame = +3
Query: 159 MEKIVEKLKRFGYAEEASE------TKERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESP 320
M++IVEKLK+FGY ++ + TKERV + S+E IFY EE G N++G FS ESP
Sbjct: 111 MDRIVEKLKKFGYDDDDDDEKKDHNTKERVIEKGSVEDIFYVEE-GILPNTKGGFSSESP 169
Query: 321 LEVGNDLVTDGEVRVPLEK-------EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXX 479
VG GEVR P EK EEE R R +++TSLA
Sbjct: 170 FGVGRFGSDGGEVRFPWEKKTVVDDEEEEDRKGLRKKSKTSLAELTLPESELKRLLKLTF 229
Query: 480 XXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIW 659
+IG GVTQA+VD IHE+WKT E+VRLK +G ALNMKRMHEILE+KTGGLVIW
Sbjct: 230 EKKHKTRIGGGGVTQAVVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILERKTGGLVIW 289
Query: 660 SSATSVSVYRGVSYELPSMQQENNLNQKTN---------ANSDTMATDKTGRDSMEWFSV 812
S SVS+YRGVSY+ PS+Q L +K+ +N+ + + +S S+
Sbjct: 290 RSGNSVSLYRGVSYKDPSIQHNKQLYRKSENSSKFLSKPSNNFAVKPSELTSNSETNTSL 349
Query: 813 DDVQQANVVQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDY 992
+ ++ N KE ++L + YE EV+KLLDG+GPRYT+WPG PLPVDAD+LP V Y
Sbjct: 350 EKLESTN--DQKEKDNLPKLTYEDEVDKLLDGLGPRYTDWPGCEPLPVDADMLPPTVPGY 407
Query: 993 KPPFRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAK 1172
+PPFR+LP+GVR TLG KEAT+LRR+ + +PPHFA+GR+RQ QGLA AM KLWE+SSIAK
Sbjct: 408 QPPFRVLPFGVRPTLGLKEATSLRRIARGLPPHFALGRNRQLQGLAAAMIKLWEKSSIAK 467
Query: 1173 IALKRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXX 1352
+ALKRGVQ+TT +RMAE+IKK+TGGT++S KD++VFFRGK FLS DV
Sbjct: 468 VALKRGVQLTTSERMAEEIKKLTGGTILSRNKDFLVFFRGKSFLSSDVTEALLERERMAK 527
Query: 1353 XXQDEEEQARLRASSSVIPVVEMTEVSGA-AGTLGETLTADARWGKRIDDNDRNKVLRAA 1529
QDEEEQARLRASS +IP + +E+S A AGTLGETL ADA+WGK +D+ + KV+R
Sbjct: 528 AMQDEEEQARLRASSLLIPAINTSELSVAEAGTLGETLDADAKWGKTLDERHKQKVMREV 587
Query: 1530 QVARRANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKI 1706
+ R AN VR+LEQ L++AERK+M+AE++L K+E LKP E +ITDEERFMFRK+
Sbjct: 588 EQLRHANLVRKLEQKLSLAERKIMRAEKALMKVEESLKPSENTADPESITDEERFMFRKL 647
Query: 1707 GLRMNAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGIL 1886
GLRM AFLLLGRRGVFDGTVE+MH+HWKYREL+KI+VKAK +QV+ IAL+LE ESGG+L
Sbjct: 648 GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELIKIIVKAKNFEQVKKIALALEAESGGVL 707
Query: 1887 VSVDKISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKT 2066
VSVDK+S+G+SI+++RGK+Y++PS +RPKNLLTKRKALARSIELQR EA+ +HIS L+
Sbjct: 708 VSVDKVSKGYSILVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRHEALSTHISTLQSN 767
Query: 2067 VDSLRSELDQME 2102
++ LRSE++QME
Sbjct: 768 MEKLRSEIEQME 779
Score = 27.3 bits (59), Expect(2) = 0.0
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKDQNTKDEGHE---KIYDVEVGKSIDN 2229
+GDE L KL S Y T D N++ E E +IY+ E +++
Sbjct: 784 EGDEALYNKLDSAYSTDDDNSEVEDGEEGDEIYNSEDDSEVES 826
>ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula] gi|355479830|gb|AES61033.1| Chloroplastic
group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 838
Score = 708 bits (1828), Expect(2) = 0.0
Identities = 378/668 (56%), Positives = 484/668 (72%), Gaps = 18/668 (2%)
Frame = +3
Query: 153 TKMEKIVEKLKRFGYAEEASET--KERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPLE 326
++M++IVEKLK+FGY + +E +E V + S+E IFY EE G N++G FS ESP
Sbjct: 109 SRMDRIVEKLKKFGYESDENENIKEEGVIEKGSMEDIFYVEE-GMLPNTRGGFSPESPFG 167
Query: 327 VGNDLVTDG-EVRVPLEK-----EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXD 488
+G+ DG EVR P EK E E R +R +++TS+A
Sbjct: 168 IGSYGSGDGGEVRFPWEKPVVDEEVEERTSSRKKSKTSMAELTLPESELRRLLKLTFMKK 227
Query: 489 ESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWSSA 668
+IG GVTQA VD IHE+WKT E+VRLK +G ALNMKRMHEILEKKTGGLVIW S
Sbjct: 228 HKTRIGGGGVTQAAVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILEKKTGGLVIWRSG 287
Query: 669 TSVSVYRGVSYELPSMQQENNLNQKT-------NANSDTMATDKTG--RDSMEWFSVDDV 821
SVS+YRGVSY+ PS+QQ L +K +A SD + + DS S++ +
Sbjct: 288 NSVSLYRGVSYKDPSIQQNKQLYRKNEKSLKFLSAPSDDFEVEPSEFTTDSETKTSLEKL 347
Query: 822 QQANVVQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYKPP 1001
+ N KE +L + YE EV+KLLDG+GPRYT+WPG PLPVDAD+LP V Y+PP
Sbjct: 348 ESTN--DQKEKVNLPKISYEDEVDKLLDGLGPRYTDWPGCEPLPVDADMLPPTVPGYQPP 405
Query: 1002 FRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKIAL 1181
FR+LP+GVR TLG KEAT+LRR+ + +PPHFA+GR+RQ QGLA AM KLWE+SSIAK+AL
Sbjct: 406 FRVLPFGVRPTLGFKEATSLRRIARGLPPHFALGRNRQLQGLAAAMIKLWEKSSIAKVAL 465
Query: 1182 KRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXXXQ 1361
KRGVQ+TT +RMAE+IKK+TGG ++S KD++VF+RGK+FLSPDV Q
Sbjct: 466 KRGVQLTTSERMAEEIKKLTGGIILSRNKDFLVFYRGKNFLSPDVTQALLEREKMAKSMQ 525
Query: 1362 DEEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQVAR 1541
DEEEQARLRASS ++P + +E+S AGTLGETL ADA+WGK +D+ KV+R + R
Sbjct: 526 DEEEQARLRASSLILPAINTSELSAEAGTLGETLDADAKWGKTLDECHEQKVMREVEQLR 585
Query: 1542 RANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIGLRM 1718
AN VR+LE+ L++AERK+ +AER+L K+E LKP E R +ITDEERFMFRK+GLRM
Sbjct: 586 HANIVRKLEEKLSLAERKIRRAERALMKVEVSLKPSETRADPESITDEERFMFRKLGLRM 645
Query: 1719 NAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVSVD 1898
AFLLLGRRGVFDGT+E+MH+HWKYRELVKI+VKA + V+ IAL+LE ESGG+LVSVD
Sbjct: 646 KAFLLLGRRGVFDGTIENMHLHWKYRELVKIIVKANNFEHVKKIALALEAESGGVLVSVD 705
Query: 1899 KISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVDSL 2078
K+S+G+SI+++RGK+Y++PS++RPKNLLTKRKALARSIELQR EA+ SHIS L+ V+ L
Sbjct: 706 KVSKGYSILVYRGKDYQRPSMLRPKNLLTKRKALARSIELQRHEALSSHISTLQSKVEKL 765
Query: 2079 RSELDQME 2102
RSE++Q+E
Sbjct: 766 RSEIEQIE 773
Score = 27.3 bits (59), Expect(2) = 0.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKDQNTKDEGHEKIYDVEVGKSIDN 2229
+GDE L +L S Y T D N++ E E+ +VE DN
Sbjct: 778 EGDEALYNRLDSAYSTDDDNSEAEDEEE--EVEAYLQSDN 815
>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Solanum tuberosum]
Length = 883
Score = 706 bits (1823), Expect(2) = 0.0
Identities = 378/663 (57%), Positives = 475/663 (71%), Gaps = 16/663 (2%)
Frame = +3
Query: 159 MEKIVEKLKRFGYAEEASETKE---RVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPLEV 329
M++IVEKLK+FGYA+EA+E ++ RV + S+E IF+ EE G N +G FS ESP
Sbjct: 154 MDRIVEKLKKFGYADEATEKEKKEKRVVEKGSIEDIFFVEE-GILPNVRGGFSEESPFGD 212
Query: 330 GNDLVTDGEVRVPLE----KEEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESL 497
N + DG VR P E K+EE ++A R+RT LA
Sbjct: 213 ENVIAKDGVVRFPWERPLVKKEESNSMAS-RSRTHLAELTLPASELRRLTNLALRIKNKS 271
Query: 498 KIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWSSATSV 677
+I +GVTQ +V+ I EKWKT EVVRLK +GA ALNMKRMHEILE+KTGGLVIW S TSV
Sbjct: 272 RITGAGVTQQVVETIREKWKTSEVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSV 331
Query: 678 SVYRGVSYELPSMQQENNLNQKTN--------ANSDTMATDKTGRDSMEWFSVDDVQQAN 833
++YRGVSYE PS + + + ++ + ++ + DS+ SVD ++
Sbjct: 332 ALYRGVSYETPSERMKKRIMRRDEIRHKNSPIVDGESNQNPRNDVDSLREDSVDTSEEN- 390
Query: 834 VVQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYKPPFRIL 1013
K ++ +E YE EV+KLLDG+GPRYT+WPG PLPVDADLLPG+V Y+PPFRIL
Sbjct: 391 ----KNIDRQSEVNYEDEVDKLLDGLGPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRIL 446
Query: 1014 PYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKIALKRGV 1193
PYGVRSTL +EAT LRRL +++PPHFA+GRSRQHQGLA M KLW+RSSIAKIA+KRGV
Sbjct: 447 PYGVRSTLAAREATALRRLARVLPPHFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGV 506
Query: 1194 QVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXXXQDEEE 1373
Q+TT +RMAEDIKK+TGG L+S KD++VF+RGKDFLSP+V QDEEE
Sbjct: 507 QLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEE 566
Query: 1374 QARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQVARRANF 1553
+ARLRAS + V S AGTLGETL ADARWGKR+DD D+ V+R A++ R +
Sbjct: 567 KARLRASLLLTAGVTTINSSRTAGTLGETLDADARWGKRLDDKDKENVMREAELLRHGDL 626
Query: 1554 VRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIGLRMNAFL 1730
VR+LE+ LA AERKLMKAER L+K+E L P + R ++TDEERFMFRK+GLRM AFL
Sbjct: 627 VRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRAEPDSLTDEERFMFRKLGLRMKAFL 686
Query: 1731 LLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVSVDKISE 1910
LLGRRG+FDGTVE+MH+HWKYRELVKI+VKAK +QV IAL+LE ESGG+LVSVDK+S+
Sbjct: 687 LLGRRGIFDGTVENMHLHWKYRELVKIMVKAKNFEQVSKIALALEAESGGVLVSVDKVSK 746
Query: 1911 GFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVDSLRSEL 2090
G++II+FRGK+Y +P +RPKNLLTKRKALARSIELQRREA+ HISA++ V L +E+
Sbjct: 747 GYAIIVFRGKDYSRPPTLRPKNLLTKRKALARSIELQRREALLEHISAVQTRVGQLTAEI 806
Query: 2091 DQM 2099
+Q+
Sbjct: 807 EQL 809
Score = 27.3 bits (59), Expect(2) = 0.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 2116 DEELKAKLYSMYPTKDQNTKDEGHEKIYDV 2205
D+EL KL S Y ++D+++++EG + +V
Sbjct: 817 DDELYDKLNSAYSSEDEDSEEEGDDAYIEV 846
>ref|XP_007144072.1| hypothetical protein PHAVU_007G126200g [Phaseolus vulgaris]
gi|561017262|gb|ESW16066.1| hypothetical protein
PHAVU_007G126200g [Phaseolus vulgaris]
Length = 827
Score = 706 bits (1823), Expect = 0.0
Identities = 375/662 (56%), Positives = 479/662 (72%), Gaps = 12/662 (1%)
Frame = +3
Query: 153 TKMEKIVEKLKRFGYAEEASETKERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPLEVG 332
+ M +IVEKLK+ GYA + E K++V + S+E IFY E G N++G FS ESPL G
Sbjct: 105 SNMNRIVEKLKKIGYAGDGIENKQKVIEKGSVEDIFYVGE-GMLPNARGGFSPESPLGFG 163
Query: 333 NDLVTDGEVRVPLEKEE----EGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESLK 500
DGE R P EK E E R R++TS+A +
Sbjct: 164 RFGSDDGEARFPWEKPEAEELEESKAIRKRSKTSVAELTLPESELKRLLRLTFEKKHKTR 223
Query: 501 IGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWSSATSVS 680
IG SGVTQA+VD IHE+WKT+E+VRLK +G ALNM+RMHEILE+KTGGLVIW S SVS
Sbjct: 224 IGRSGVTQAVVDKIHERWKTVEIVRLKFEGEAALNMRRMHEILERKTGGLVIWRSGNSVS 283
Query: 681 VYRGVSYELPSMQQENNLNQKTNANSDTMATDKTG--RDSMEWFSVDDVQQ--ANVVQP- 845
+YRGVSYE+PS+QQ N + +K+ +S + T R+S S + AN+
Sbjct: 284 LYRGVSYEVPSIQQNNQMYRKSENSSKLLPTPSYNSVRNSPTIASNSGASEPLANLESTN 343
Query: 846 --KELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYKPPFRILPY 1019
KE + L + YE EV+KLLD +GPRYT+W G +PLPVDAD+LP V Y+PPFR+LP+
Sbjct: 344 DQKEGDYLPKVSYELEVDKLLDDLGPRYTDWSGCDPLPVDADMLPATVPGYQPPFRVLPF 403
Query: 1020 GVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKIALKRGVQV 1199
GVRSTLG +EAT+LRR+ + +PPHFA+GR+RQ QGLA A+ KLWE SSIAK+ALKR VQ+
Sbjct: 404 GVRSTLGLREATSLRRIARTLPPHFALGRNRQLQGLAEAIVKLWEVSSIAKVALKRSVQL 463
Query: 1200 TTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXXXQDEEEQA 1379
TT +RMAE+IKK+TGG L+S KD++VFFRGK+FLS DV QDEEEQA
Sbjct: 464 TTSERMAEEIKKLTGGILLSRNKDFLVFFRGKNFLSADVTQTLLERERTAKVMQDEEEQA 523
Query: 1380 RLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQVARRANFVR 1559
RLRA+S +IP +E+S AGTLGETL ADA+WGK +D+ + K++R + R AN V+
Sbjct: 524 RLRAASLLIPSNNTSELSAEAGTLGETLDADAKWGKTLDERHKQKIMREVEQLRHANLVK 583
Query: 1560 RLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIGLRMNAFLLL 1736
+LEQ L++AERKLM+AE++L K+E LKP E + +ITDEERFMFRK+GL+M AFLLL
Sbjct: 584 KLEQKLSLAERKLMRAEKALMKVELSLKPSEHKADPDSITDEERFMFRKLGLKMKAFLLL 643
Query: 1737 GRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVSVDKISEGF 1916
GRRGVFDGT+E+MH+HWKYR+LVKI++KAKT +QV+ IAL+LE ESGG+LVSVDKIS+G+
Sbjct: 644 GRRGVFDGTIENMHLHWKYRDLVKIILKAKTFEQVKKIALALEAESGGVLVSVDKISKGY 703
Query: 1917 SIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVDSLRSELDQ 2096
SII+FRGK+Y++PS +RPKNLLTKRKALARSIELQR EAI HI+ ++ V LRSE++Q
Sbjct: 704 SIIVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRHEAILKHITTIQAKVQKLRSEIEQ 763
Query: 2097 ME 2102
ME
Sbjct: 764 ME 765
>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Cucumis sativus]
gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like [Cucumis sativus]
Length = 874
Score = 704 bits (1818), Expect(2) = 0.0
Identities = 380/666 (57%), Positives = 476/666 (71%), Gaps = 18/666 (2%)
Frame = +3
Query: 159 MEKIVEKLKRFGYAEEASETK--ERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPLEVG 332
MEKIV KLK+FGY ++ ++ K ER + S+E I Y EE G N++G FS ESP+
Sbjct: 140 MEKIVRKLKKFGYIDDENKEKGEERAIEKGSVEDILYIEE-GMLPNTRGGFSKESPMGDE 198
Query: 333 NDLVTDGEVRVPLEKEEEGRNL---ARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESLKI 503
N +DGEVR P EK +E + + R SLA +KI
Sbjct: 199 NMFGSDGEVRFPWEKPKEKEDTHGDSTRRGSASLAQLTLPEPELRRLRNLTFQKRHKMKI 258
Query: 504 GSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWSSATSVSV 683
G GVTQA+VD+IHEKWK+ E+VRLK G ALNMKRMHEILE+KTGGLVIW S TS+S+
Sbjct: 259 GGGGVTQAVVDVIHEKWKSSEIVRLKILGPPALNMKRMHEILERKTGGLVIWRSGTSLSL 318
Query: 684 YRGVSYELPSMQQENNLNQKTNANSDTMATDKTGRDSMEWFSVDDVQQANVVQPKELESL 863
YRGVSYELP Q N K N + A KTG ++ + +Q K E+
Sbjct: 319 YRGVSYELPEAPQFNKRIYKRN---EITALPKTGASTIAPSESSSHRNVYALQQKRAETS 375
Query: 864 AETE------------YEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYKPPFR 1007
E E YE EV KLLDG+GPRYT+WPG +PLPVDAD+LPGVV DY+PPFR
Sbjct: 376 IEGEHCSEQLTKVQVNYEDEVNKLLDGLGPRYTDWPGLDPLPVDADMLPGVVPDYEPPFR 435
Query: 1008 ILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKIALKR 1187
ILPYGVRS++G KEAT L+RL + +PPHFA+GR+RQ QGLA+AM KLWERS IAKIALKR
Sbjct: 436 ILPYGVRSSIGVKEATALKRLARRLPPHFALGRNRQLQGLAIAMTKLWERSLIAKIALKR 495
Query: 1188 GVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXXXQDE 1367
GVQ+TT +RMAE+IKK+TGG L+S KD++VF+RGK FLSP+V QD+
Sbjct: 496 GVQLTTSERMAEEIKKLTGGMLLSRNKDFLVFYRGKSFLSPEVTEALLERERLAKSLQDK 555
Query: 1368 EEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQVARRA 1547
EEQARL+AS+ V+P +E TE SG AG+L ETL ADARWGK +DD + V+R A+ R
Sbjct: 556 EEQARLKASAFVVP-IEKTEQSGTAGSLEETLDADARWGKALDDKHKENVMREAEQLRHT 614
Query: 1548 NFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIGLRMNA 1724
+ VR+LE+ LA AERKL+KAER+LAK+EA++ P + + +IT+EERFMFRK+GLRM A
Sbjct: 615 DLVRKLERKLAFAERKLVKAERTLAKVEAFMTPAKRQAEPDSITEEERFMFRKLGLRMKA 674
Query: 1725 FLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVSVDKI 1904
FLLLGRR VFDGTVE+MH+HWKYRELVKI++KA + D V+NIAL LE ESGG+LVS+DK+
Sbjct: 675 FLLLGRREVFDGTVENMHLHWKYRELVKIMIKANSFDHVKNIALQLEAESGGVLVSIDKV 734
Query: 1905 SEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVDSLRS 2084
S+G++II++RGK+YK+PS++RPKNLLTKRKALARSIELQR EA+ HISA++ V L S
Sbjct: 735 SKGYAIIVYRGKDYKRPSLLRPKNLLTKRKALARSIELQRHEALLKHISAMQSKVGKLNS 794
Query: 2085 ELDQME 2102
E++QME
Sbjct: 795 EIEQME 800
Score = 24.3 bits (51), Expect(2) = 0.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKDQNTKDEGHE 2190
QGDE L L S YPT D +++DE +
Sbjct: 805 QGDEVLYNTLDSAYPT-DNDSEDENSD 830
>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Solanum lycopersicum]
Length = 883
Score = 700 bits (1806), Expect(2) = 0.0
Identities = 376/663 (56%), Positives = 475/663 (71%), Gaps = 16/663 (2%)
Frame = +3
Query: 159 MEKIVEKLKRFGYAEEASETKER---VPGRKSLEHIFYAEEEGNSRNSQGRFSIESPLEV 329
M++IVEKLK+FGYA+EA+E ++R V + S+E IF+ EE G N +G FS E+P
Sbjct: 154 MDRIVEKLKKFGYADEATEKEKREKRVVEKGSIEDIFFVEE-GILPNVRGGFSEETPFGD 212
Query: 330 GNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESL 497
N + DG V P EK +EE ++A R+RT LA
Sbjct: 213 ENIIAKDGVVGFPWEKPLVKKEESNSMAS-RSRTHLAELTLPASELRRLTNLALRIKNKS 271
Query: 498 KIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLVIWSSATSV 677
+I +GVTQ +V+ I EKWKT EVVRLK +GA ALNMKRMHEILE+KTGGLVIW S TSV
Sbjct: 272 RITGAGVTQQVVETIREKWKTSEVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSV 331
Query: 678 SVYRGVSYELPS------MQQENNLNQKTN--ANSDTMATDKTGRDSMEWFSVDDVQQAN 833
++YRGVSYE PS + + + + QK + + ++ + DS+ SVD ++
Sbjct: 332 ALYRGVSYETPSERMKKRIMRRDEIRQKNSPIVDGESNQNSRNDVDSLREDSVDTSEEN- 390
Query: 834 VVQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYKPPFRIL 1013
K ++ +E YE EV+KLLDG+GPRYT+WPG PLPVDADLLPG+V Y+PPFRIL
Sbjct: 391 ----KSIDRQSEVNYEDEVDKLLDGLGPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRIL 446
Query: 1014 PYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKIALKRGV 1193
PYGVRSTL +EAT LRRL +++PPHFA+GRSRQHQGLA M KLW+RSSIAKIA+KRGV
Sbjct: 447 PYGVRSTLAAREATALRRLARVLPPHFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGV 506
Query: 1194 QVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXXXQDEEE 1373
Q+TT +RMAEDIKK+TGG L+S KD++VF+RGKDFLSP+V QDEEE
Sbjct: 507 QLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEE 566
Query: 1374 QARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQVARRANF 1553
+ARLRAS ++ V S AGTLGETL ADARWGKR+DD + V+R A++ R +
Sbjct: 567 KARLRASLNLTAGVTTINSSRTAGTLGETLDADARWGKRLDDKHKENVMREAELLRHGDL 626
Query: 1554 VRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIGLRMNAFL 1730
VR+LE+ LA AE+KLMKAER L+K+E L P + ++TDEERFMFRK+GLRM AFL
Sbjct: 627 VRKLEKKLAFAEKKLMKAERVLSKVEETLNPLDRHAEPDSLTDEERFMFRKLGLRMKAFL 686
Query: 1731 LLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILVSVDKISE 1910
LLGRRG+FDGTVE+MH+HWKYRELVKI+VKAK +QV IAL+LE ESGGILVSVDK+S+
Sbjct: 687 LLGRRGIFDGTVENMHLHWKYRELVKIMVKAKNFEQVSKIALALEAESGGILVSVDKVSK 746
Query: 1911 GFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKTVDSLRSEL 2090
G++II+FRGK+Y +P +RPKNLLTKRKALARSIELQRREA+ HISA++ V L +E+
Sbjct: 747 GYAIIVFRGKDYSRPPTLRPKNLLTKRKALARSIELQRREALLEHISAVQTRVGQLTAEI 806
Query: 2091 DQM 2099
+Q+
Sbjct: 807 EQL 809
Score = 27.7 bits (60), Expect(2) = 0.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 2116 DEELKAKLYSMYPTKDQNTKDEGHEKIYDV 2205
D+EL KL S Y ++D+++++EG + +V
Sbjct: 817 DDELYDKLNSAYSSEDEDSEEEGDDAFIEV 846
>gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 878
Score = 688 bits (1776), Expect(2) = 0.0
Identities = 370/648 (57%), Positives = 480/648 (74%), Gaps = 24/648 (3%)
Frame = +3
Query: 159 MEKIVEKLKRFGYAEEA-SETKE----RVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPL 323
ME+IVEKLK+FGY ++ SE KE RV + S+E IFY EE G N +G FS +SPL
Sbjct: 136 MERIVEKLKKFGYMDDVGSEGKEDKGERVIEKGSVEDIFYVEE-GMLPNPRGGFSPDSPL 194
Query: 324 EV-----GNDLVTDGEVRVPLEK-----EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXX 473
V GN GEVR P EK E+EG ++ R R++TSLA
Sbjct: 195 GVEGVFGGNG----GEVRFPWEKPKEKVEKEGGSMRR-RSKTSLAELTLPESELRRLRNL 249
Query: 474 XXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGLV 653
+IG +GVTQ +VDMIHE+WKTLE+VRLK +GA ALNMKRMHEILE+KTGGLV
Sbjct: 250 TFQKKHKTRIGGAGVTQEVVDMIHERWKTLEIVRLKIEGAPALNMKRMHEILERKTGGLV 309
Query: 654 IWSSATSVSVYRGVSYELPSMQQENNLNQKTNANSDTMATDKTGRDSMEWFSVD------ 815
+W S TS+S+YRGVSY++PS++ + L +K +S DK+ RD + F+ D
Sbjct: 310 VWRSGTSLSLYRGVSYQVPSLELKKRLYKKPEISSIQTVGDKSTRDLAK-FAPDTNTDTA 368
Query: 816 -DVQQANVVQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDY 992
+ ++ + K++E E +YE E++K+LDG+GPRY +WPG + PVDAD+LP +V Y
Sbjct: 369 IEKSESPSQEKKDVERSPEVKYEDEIDKILDGLGPRYEDWPGSDISPVDADMLPSIVPGY 428
Query: 993 KPPFRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAK 1172
+PPFRILP+GVR +LG KEAT+LRRL +++PPHFA+GR+RQ QGLA+AM LWE+S IAK
Sbjct: 429 QPPFRILPFGVRPSLGPKEATSLRRLARVLPPHFAVGRNRQLQGLAVAMINLWEKSLIAK 488
Query: 1173 IALKRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXX 1352
IALKRGVQ+TT +RM E+IKK+TGG L+S KD++VF+RGK+FLSP+V
Sbjct: 489 IALKRGVQLTTSERMVEEIKKLTGGVLLSRNKDFLVFYRGKNFLSPEVTKALLERERLAK 548
Query: 1353 XXQDEEEQARLRASSSVIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDRNKVLRAAQ 1532
QDEEEQARLRAS+ ++P E+TE G+AGTLGETL A+A+WGKR+D+ + +V+R A+
Sbjct: 549 SLQDEEEQARLRASAIIVPRTEVTEQPGSAGTLGETLDANAKWGKRLDNRHKKEVMRQAE 608
Query: 1533 VARRANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKIG 1709
++R AN VR+LE+ LA +ERKLMKAER+LAK+E +L+P + +IT+EERFMFRK+G
Sbjct: 609 ISRHANLVRKLEKKLAFSERKLMKAERALAKVEQFLQPANRQADPESITNEERFMFRKLG 668
Query: 1710 LRMNAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGILV 1889
LRM AFLLLGRRGVFDGTVE+MH+HWKYREL+KIVV A+T DQVR +AL+LE ESGG+LV
Sbjct: 669 LRMKAFLLLGRRGVFDGTVENMHLHWKYRELIKIVVNARTFDQVRKVALALEAESGGVLV 728
Query: 1890 SVDKIS-EGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRRE 2030
SVDKIS + F+II+FRGK+Y++PS +RPKNLLTKRKALARSIELQR+E
Sbjct: 729 SVDKISKKKFAIIVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRQE 776
Score = 25.4 bits (54), Expect(2) = 0.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKDQNTKDEGHE 2190
QGDE L KL YPT D+ ++ E
Sbjct: 785 QGDEALYDKLDFDYPTSDEEDEESEEE 811
>ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata] gi|297329237|gb|EFH59656.1| hypothetical protein
ARALYDRAFT_898801 [Arabidopsis lyrata subsp. lyrata]
Length = 873
Score = 684 bits (1765), Expect(2) = 0.0
Identities = 367/672 (54%), Positives = 474/672 (70%), Gaps = 20/672 (2%)
Frame = +3
Query: 147 DSTKMEKIVEKLKRFGYAEEASETK------ERVPGRKSLEHIFYAEEEGNSRNSQGRFS 308
+ + MEKIVEKLK++GY E+ E + ER + S+E IFY EE GN N++G F+
Sbjct: 110 EGSTMEKIVEKLKKYGYMEKGEEVQNKEIEQERRIEKGSVEDIFYVEE-GNLPNTRGGFT 168
Query: 309 IESPLEVGNDLVTDGEVRVPLEK-------EEEGRNLARWRNRTSLAXXXXXXXXXXXXX 467
ES L + ++GEV P EK E E A+ NR SLA
Sbjct: 169 EESLLGRDDVFGSNGEVGFPWEKMSAKEKKELEAEWTAKKENRYSLAEMTLPESELRRLR 228
Query: 468 XXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGG 647
++I +GVTQ VD I EKWK+ E+VRLK +GA ALNM++MHEILEKKTGG
Sbjct: 229 NLTFRTASKMRIRGAGVTQVAVDAIKEKWKSAEIVRLKIEGASALNMRKMHEILEKKTGG 288
Query: 648 LVIWSSATSVSVYRGVSYELPSMQQENNLNQKTNANS----DTMATDKTGRDSMEWFSVD 815
LVIW S TS+S+YRGVSYELPS + ++T +S TM + G+ +
Sbjct: 289 LVIWRSGTSISLYRGVSYELPSGKWNKQRREETPPSSLPETTTMVDNSDGKVHLPQLE-- 346
Query: 816 DVQQANVVQPKELESLAETEYEYEVEKLLDGIGPRYTEWPGGNPLPVDADLLPGVVSDYK 995
Q V+ K+ S + EYE E+++LLDG+GPR+ +WPG NPLPVDADLLPG + Y+
Sbjct: 347 --QVTTSVEKKDQTSQPDVEYEDEIDELLDGLGPRFMDWPGDNPLPVDADLLPGAIPGYE 404
Query: 996 PPFRILPYGVRSTLGNKEATTLRRLGKIIPPHFAIGRSRQHQGLAMAMAKLWERSSIAKI 1175
PPFR+LPYGVRS+LG KEAT LRRL + IPPHFA+GRSRQ QGLA AM +LWE+S +AKI
Sbjct: 405 PPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKI 464
Query: 1176 ALKRGVQVTTIDRMAEDIKKVTGGTLVSIYKDYMVFFRGKDFLSPDVXXXXXXXXXXXXX 1355
A+KRGVQ TT +RMAED+KK+TGG L+S KD++VF+RGK+FLS +V
Sbjct: 465 AIKRGVQSTTSERMAEDLKKLTGGILLSRNKDFLVFYRGKNFLSREVADALVEQERFVRT 524
Query: 1356 XQDEEEQARLRASSS-VIPVVEMTEVSGAAGTLGETLTADARWGKRIDDNDR-NKVLRAA 1529
QDEEEQARLR SS+ ++P +E + +AGTLGETL A +WGK +DD+D ++V +
Sbjct: 525 LQDEEEQARLRGSSALIVPCIEPPKKLVSAGTLGETLDATGKWGKNLDDDDHSDEVKQEV 584
Query: 1530 QVARRANFVRRLEQNLAIAERKLMKAERSLAKMEAYLKPPEPRYS-GNITDEERFMFRKI 1706
++ R N VR+LE+ LA AERKL+KAER LAK+E LKP E R +ITDEERFMFRK+
Sbjct: 585 EILRHENLVRKLERKLAFAERKLLKAERGLAKVEECLKPAEQREDPDSITDEERFMFRKL 644
Query: 1707 GLRMNAFLLLGRRGVFDGTVESMHMHWKYRELVKIVVKAKTLDQVRNIALSLEVESGGIL 1886
GL+M AFLLLGRRGVFDGTVE+MH+HWKYRELVKI+VKAKT D V+ +AL+LE ESGGIL
Sbjct: 645 GLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGIL 704
Query: 1887 VSVDKISEGFSIILFRGKEYKQPSVMRPKNLLTKRKALARSIELQRREAICSHISALEKT 2066
VS+DK+++G++II++RGK+YK+P+++RPKNLLTKRKALARSIELQRRE + HIS ++
Sbjct: 705 VSIDKVTKGYAIIVYRGKDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTMQAK 764
Query: 2067 VDSLRSELDQME 2102
+ LR+E++QME
Sbjct: 765 AEQLRAEIEQME 776
Score = 25.0 bits (53), Expect(2) = 0.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 2110 QGDEELKAKLYSMYPTKDQNTKDE 2181
+GDEEL KL Y + D+ T +E
Sbjct: 781 KGDEELYNKLDMAYASSDEETDEE 804