BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00016320
         (1505 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   697   0.0  
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun...   685   0.0  
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   671   0.0  
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob...   670   0.0  
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   658   0.0  
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   651   0.0  
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   649   0.0  
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...   647   0.0  
ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phas...   647   0.0  
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   646   0.0  
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   645   0.0  
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl...   644   0.0  
gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus...   641   0.0  
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   637   e-180
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...   636   e-180
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   635   e-179
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   633   e-179
ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   625   e-176
ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [A...   621   e-175
ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chlor...   620   e-175

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  697 bits (1799), Expect = 0.0
 Identities = 323/399 (80%), Positives = 362/399 (90%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            S NGYP+Y RLLPCP +NGPPRVEHLVV+EGG VLDYI K LDLP  FVADLIHFGAVYY
Sbjct: 73   SVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAVYY 132

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCPEPPPSATPEQ+R+FKEVTAPS LRKR S+KGKT+REAQKTFRIT VNEFVEAGTY
Sbjct: 133  ALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTY 192

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFA+RALG
Sbjct: 193  LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 252

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            LTTPL+TTHQIDNCTEGCVVLAR+KEYCSVFHGKIREKKVKKLY         +GIV+HY
Sbjct: 253  LTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTHY 312

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRPVNIAPR++++DFI+GW+LCQLEVLECKEVPWPS LIEE+YC+++ GWP K  A++CK
Sbjct: 313  MRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFKCK 372

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTGRTHQ+R QLAACGAPIVGDSMY+PA +AE  SPG+NPFG ++K+YT+E++R  A
Sbjct: 373  INLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTENDRETA 432

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWW 309
            + +WI QHGKEP VAIGLQACQISWDD +H Y+AGSPWW
Sbjct: 433  VAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471


>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
            gi|462409392|gb|EMJ14726.1| hypothetical protein
            PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  685 bits (1767), Expect = 0.0
 Identities = 309/400 (77%), Positives = 359/400 (89%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            S NGYP+Y+RLLPCP  NGPPRVEHLVV+EGG VL+YICKTLDLP  FVADLIHFGAVYY
Sbjct: 76   SVNGYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGAVYY 135

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PPP+ATPEQ+RVFKEVTAPS L+ R S+KGKTVREAQKTFRITH +EFVEAGTY
Sbjct: 136  ALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEFVEAGTY 195

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCY+IDWKSRIIAV+E +VVLDKPAGT+VGGTTDNIEESCATFA+RALG
Sbjct: 196  LRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESCATFATRALG 255

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            LTTPL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIREKKVKKLY          GI++HY
Sbjct: 256  LTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPTGIITHY 315

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+N+APR++++DFI+ W LCQLEV+ECKE+PWP+A++EE+YCV++CGWP K  AYECK
Sbjct: 316  MRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWPSKDYAYECK 375

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTGRTHQVR QLAACGAPIVGDSMY+PA +AE  SPG+NPFG ++K YT+E+++  A
Sbjct: 376  INLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHYTTENDKETA 435

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            + +WI +HGKEP+VAIGLQACQISWDD +H + A +PWWR
Sbjct: 436  VAEWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWR 475


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
            gi|550340110|gb|EEE85437.2| pseudouridine synthase family
            protein [Populus trichocarpa]
          Length = 470

 Score =  671 bits (1732), Expect = 0.0
 Identities = 306/400 (76%), Positives = 357/400 (89%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            S NGYP+Y+RLLPCP  N PPR+EHLVV+E G VLDYICK LDLP  FVADLIHFGAV+Y
Sbjct: 67   SVNGYPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYICKALDLPPLFVADLIHFGAVHY 126

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PP +ATPEQIRVF+EVTAPS L+KR S+KGKTVREAQKTFRITHV++F+EAG Y
Sbjct: 127  ALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHVDQFLEAGMY 186

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCY+IDWKSRII VTES+VVLDKPAGTSVGGTTDNIEESCATFA+RALG
Sbjct: 187  LRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESCATFATRALG 246

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            LT PL+TTHQIDNCTEGCVVLAR++E CSVFHGKIREK VKKLY         +G+V+HY
Sbjct: 247  LTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASPVPIGVVNHY 306

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+N+APR+V+++FI+GWHLCQLEV+ECK VPWP A++EE+YCV +CGWP K  AYECK
Sbjct: 307  MRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWPSKDHAYECK 366

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTGRTHQ+R QLAA GAP+VGDSMY+PA +AE  SPG NPFG ++KQYTSED+++ A
Sbjct: 367  INLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQYTSEDDKAIA 426

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            +E+W++ HGKEP+VAIGLQACQISWDD +H+Y AGSPWWR
Sbjct: 427  VEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWR 466


>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508781387|gb|EOY28643.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 491

 Score =  670 bits (1728), Expect = 0.0
 Identities = 309/396 (78%), Positives = 355/396 (89%)
 Frame = -1

Query: 1493 YPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYYAMVC 1314
            YP+Y RLLPCP  NGPPRVEHLVV+EGG VL+YICK LDLP  FVADLIHFGAVYYA+VC
Sbjct: 93   YPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPPMFVADLIHFGAVYYALVC 152

Query: 1313 PEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTYLRVH 1134
            P+PPPSATPEQIR+FKEVTAPS L KR S++GKTVREAQKTFRITHV++FVEAGTYLRVH
Sbjct: 153  PQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHVDQFVEAGTYLRVH 212

Query: 1133 VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALGLTTP 954
            VHPKRFPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGTTDNIEESCATFA+RALG +TP
Sbjct: 213  VHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCATFANRALGFSTP 272

Query: 953  LKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHYMRPV 774
            LKTTHQIDNCTEGCVVLAR+KEYCSVFHGKIREKKVKKLY         +G+++HYMRP+
Sbjct: 273  LKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALTAAPLPIGVITHYMRPI 332

Query: 773  NIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECKINLL 594
            N+APR+V++DFI+GW+LCQLEV+ECK+VPWP  +I+E YC+++ GWP K  AYECKINLL
Sbjct: 333  NMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIEDSGWPLKDHAYECKINLL 392

Query: 593  TGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKAIEDW 414
            TGRTHQVR QLAACGAPI+GDSMY+P  +AE A+PG+NPFG ++K +TSE+++  AI +W
Sbjct: 393  TGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANPGLNPFGKYKK-HTSENDKEIAITEW 451

Query: 413  IVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            I Q GKEPSVAIGLQACQISWDD +H Y+A SPWWR
Sbjct: 452  ISQFGKEPSVAIGLQACQISWDDGEHFYKARSPWWR 487


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  658 bits (1697), Expect = 0.0
 Identities = 301/398 (75%), Positives = 348/398 (87%)
 Frame = -1

Query: 1499 NGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYYAM 1320
            NG   Y RLLPCP  N PPR+EHLVV E G VLDYICK LDLP  FVADLI FGAV+YA+
Sbjct: 75   NGNSDYDRLLPCPSYNRPPRIEHLVVLEEGPVLDYICKALDLPPLFVADLIDFGAVHYAL 134

Query: 1319 VCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTYLR 1140
            VCP PP +ATPEQIR+F++ TAPS L+KR S+KGKTVREAQKTFRITHV++++EAGTYLR
Sbjct: 135  VCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQYLEAGTYLR 194

Query: 1139 VHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALGLT 960
            VHVHPKRFPRCY+IDWKSRIIAVT+ YVVLDKPAGTSVGGT DNIEESCATFA+RALGLT
Sbjct: 195  VHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESCATFATRALGLT 254

Query: 959  TPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHYMR 780
            TPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLY         +G++ +YMR
Sbjct: 255  TPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASPVPVGVIKNYMR 314

Query: 779  PVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECKIN 600
            PVNIAPR+++++F+ GWHLCQLEVLEC++VPWP A IEE+Y V++CGWP K  AYECKIN
Sbjct: 315  PVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWPSKDFAYECKIN 374

Query: 599  LLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKAIE 420
            LLTGRTHQ+R QLAA GAP+VGDSMY+PA +AE A+PG+NPFG HRKQYT+E + S A+ 
Sbjct: 375  LLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQYTNESDESMAVA 434

Query: 419  DWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            +W+ QHGKEP VAIGLQAC+ISWD+ +H+Y+AGSPWWR
Sbjct: 435  EWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSPWWR 472


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
            gi|557551677|gb|ESR62306.1| hypothetical protein
            CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  651 bits (1680), Expect = 0.0
 Identities = 301/400 (75%), Positives = 351/400 (87%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            SS GYP+Y RLLPCP +N PPRVEHLVV+EGG VL+YIC+ L+LP  FVADLIHFGAVYY
Sbjct: 79   SSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAVYY 138

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PP +ATPEQ+RVFKEVT PS L KR S+KGKTVREAQKTFRITHV++ VEAGTY
Sbjct: 139  ALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTY 198

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCY+IDWKSRIIAVTES+VVLDKPAGTSVGGTTDNIEESCATFASRALG
Sbjct: 199  LRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRALG 258

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            LTTPL+TTHQIDNCTEGCVVLAR++EYCS+FH KIREKKVKKLY         +GI++HY
Sbjct: 259  LTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAPLPVGIMTHY 318

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+NIAPR++++DFI+GW+LCQLEV+ECK+VPWP A + + Y +++CGWP +  AYECK
Sbjct: 319  MRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWPSRDYAYECK 378

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            I LLTGRTHQVR QLAACGAPIVGDSMY+PA +A+ +SPG+NPFG  +K+Y S+D++  A
Sbjct: 379  IKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEYASDDDKEMA 438

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            + +WI QHGKEPSVAIGLQAC ISWDD +  Y A SPWWR
Sbjct: 439  VIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  649 bits (1673), Expect = 0.0
 Identities = 288/400 (72%), Positives = 348/400 (87%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            SS+ +PKY RLLPCP    PPR+EHLV++EGG VL+ ICK LDLP  +V+DLI FGAVYY
Sbjct: 78   SSDSFPKYDRLLPCPSHKNPPRIEHLVISEGGPVLELICKALDLPPLYVSDLIQFGAVYY 137

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PPP+AT EQIRVFKEVT PS LRKR S+KGKTVREAQKTFR+THV++FVE GTY
Sbjct: 138  ALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTY 197

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPR YEIDW+SRIIAV ESYVVLDKPAGTSVGGTTDNIEESCATFA+RALG
Sbjct: 198  LRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 257

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            +TTPL TTHQIDNCTEGCVVLAR+K+YCS+FHGKIREKKVKKLY          GI++HY
Sbjct: 258  MTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASPLPTGIITHY 317

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+N+APR++++DFI+GWHLCQLEVLEC+++PWP+  I+++YCV++CGWP +  AYECK
Sbjct: 318  MRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWPSQDYAYECK 377

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTG+THQ+R Q AA  AP++GDSMY+PA +A+ ++PG+NPFG ++K ++SE  +  A
Sbjct: 378  INLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDFSSESEKETA 437

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            + +W+ QHGKEPSVAIGLQACQISWDD++H Y AG PWWR
Sbjct: 438  VVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWR 477


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score =  647 bits (1668), Expect = 0.0
 Identities = 300/400 (75%), Positives = 348/400 (87%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            SS GYP+Y RLLPCP +N PPRVEHLVV+EGG VL+YIC+ L+LP  FVADLIHFGAVYY
Sbjct: 79   SSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAVYY 138

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PP +ATPEQ+RVFKEVT PS L KR S+KGKTVREAQKTFRITHV++ VEAGTY
Sbjct: 139  ALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTY 198

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCY+IDW SRIIAVTES+VVLDKPAGTSVGGTTDNIEESCATFASRALG
Sbjct: 199  LRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRALG 258

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            LTTPL+TTHQIDNCTEGCVVLAR++EYCS+FH KIREKKVKKLY         +GI++HY
Sbjct: 259  LTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTTAPLPVGIMTHY 318

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+NIAPR+V++DFI GW+LCQLEV+ECK+VPWP A + + Y +++CGWP +  AYECK
Sbjct: 319  MRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWPSRDYAYECK 378

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            I LLTGRTHQVR QLAACGAPIVGDSMY+PA +A+ +SPG+NPFG  +K+Y S+D++  A
Sbjct: 379  IKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEYASDDDKEMA 438

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            + +WI QHG EPSVAIGLQAC ISWDD +  Y A SPWWR
Sbjct: 439  VIEWISQHGMEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
            gi|561020966|gb|ESW19737.1| hypothetical protein
            PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score =  647 bits (1668), Expect = 0.0
 Identities = 290/400 (72%), Positives = 344/400 (86%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            SSN  PKY RLLPCPL   PPRVEHLVV+EGG VL++ICK L+LP  +V DLI FGAVYY
Sbjct: 78   SSNSLPKYDRLLPCPLHKTPPRVEHLVVSEGGPVLEHICKALELPPLYVTDLIQFGAVYY 137

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PPPSAT EQIRVFKEVT PS LR+R S+KGKTVREAQKTFR+TH ++FVE GTY
Sbjct: 138  ALVCPQPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFRVTHADQFVEPGTY 197

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCYEIDW+SRII+V ESYVVLDKPAGTSVGGTTDNIEESCATFA+RALG
Sbjct: 198  LRVHVHPKRFPRCYEIDWRSRIISVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 257

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            LT PL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIREKKVKKLY          GI++HY
Sbjct: 258  LTAPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALASSPLPTGIITHY 317

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+N+APR++++DFI+GW +CQLE+ EC++VPWP+  I+++YCV++CGWP +  AYECK
Sbjct: 318  MRPINMAPRLISEDFIKGWLMCQLEIQECRKVPWPTPSIQDKYCVEDCGWPYQDFAYECK 377

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTGRTHQ+R Q AAC AP+VGDSMY+PA + + ++PG+NPFG +++ ++SE  +  A
Sbjct: 378  INLLTGRTHQIRAQFAACRAPLVGDSMYMPAAIGDMSNPGLNPFGKYKRDFSSESEKETA 437

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            + +WI QHGKEP VAIGLQACQISWDD+ H Y +GSPWWR
Sbjct: 438  VVNWIAQHGKEPGVAIGLQACQISWDDDDHFYESGSPWWR 477


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 477

 Score =  646 bits (1666), Expect = 0.0
 Identities = 293/397 (73%), Positives = 347/397 (87%)
 Frame = -1

Query: 1496 GYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYYAMV 1317
            GYP Y+RLLPCP +NGPPRVEHLVV+EGG VL+YICK LDLP  FVADLIHFGAVYYA+V
Sbjct: 80   GYP-YTRLLPCPSQNGPPRVEHLVVSEGGPVLEYICKKLDLPAQFVADLIHFGAVYYALV 138

Query: 1316 CPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTYLRV 1137
            CP+PPP+ATPEQ+RV+KEVTAPS L+KR S+KGKTVREAQKTFRITH +++VE GTYLRV
Sbjct: 139  CPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHADQYVEDGTYLRV 198

Query: 1136 HVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALGLTT 957
            HVHPKRFPRCY+IDWKSR+IAVTE +VVLDKPAGT+VGGTTDNIEESCATF SRALGL+T
Sbjct: 199  HVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEESCATFTSRALGLST 258

Query: 956  PLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHYMRP 777
            PL TTHQIDNCTEGCVVLAR+K+YCSVFHGKIREKKVKKLY         LG ++HYMRP
Sbjct: 259  PLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAPVPLGTITHYMRP 318

Query: 776  VNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECKINL 597
            +N+APR++++D I+ W LCQLEV+ECK+VPWPS++IEE+Y V++CGWP K  AYECKINL
Sbjct: 319  INVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCGWPSKDYAYECKINL 378

Query: 596  LTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKAIED 417
            LTG+THQ+R QLAACG P+VGDSMY+PA +AE  +P +NPFG H+K Y  E++   A+ +
Sbjct: 379  LTGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENPELNPFGKHKKHYAGENDEEIAVTE 438

Query: 416  WIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            W+ +HGKEP VAIGLQACQISWDD +H + A +PWWR
Sbjct: 439  WMARHGKEPIVAIGLQACQISWDDGEHSFEARAPWWR 475


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 395

 Score =  645 bits (1664), Expect = 0.0
 Identities = 291/393 (74%), Positives = 344/393 (87%)
 Frame = -1

Query: 1484 YSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYYAMVCPEP 1305
            Y RLLPCP +N PPRVEHLVV E G VLDYICK LDLP  FVADLIHFGAV+YA+VCP+P
Sbjct: 3    YDRLLPCPSQNRPPRVEHLVVLEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVCPQP 62

Query: 1304 PPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHP 1125
            PP+ATPEQIR+F+E TAPS L+KR S+KGKTVREAQKTFR++ V++F+E GTYLRV+VHP
Sbjct: 63   PPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSVHQFLEVGTYLRVYVHP 122

Query: 1124 KRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALGLTTPLKT 945
            +RFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT+NIEE+CATFA+RALGLT PLKT
Sbjct: 123  RRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIEETCATFATRALGLTIPLKT 182

Query: 944  THQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHYMRPVNIA 765
            THQIDNCTEGCVVLAR+ EYC VFHGKIRE KVKKLY         +G+++HYMRP NI 
Sbjct: 183  THQIDNCTEGCVVLARTNEYCPVFHGKIRENKVKKLYLALAACPVPVGVITHYMRPGNIP 242

Query: 764  PRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECKINLLTGR 585
            PR+V+++FI+GW+LCQLEVLEC++VPWP  + EE+Y V++CGWP K  AYECKINLLTGR
Sbjct: 243  PRLVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWPSKDFAYECKINLLTGR 302

Query: 584  THQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKAIEDWIVQ 405
            THQ+R QLAACGAP+VGDSMY+PA +AE A+PGVNPFG H+KQYT E++ S  + +W+ +
Sbjct: 303  THQIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQYTGENDESMGVAEWVER 362

Query: 404  HGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            HGKEPS+AIGLQAC+ISW D +H+Y+AG PWWR
Sbjct: 363  HGKEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395


>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  644 bits (1661), Expect = 0.0
 Identities = 288/400 (72%), Positives = 345/400 (86%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            SS+ + KY RLLPCP    PPR+EHLVV+EGG VL++ICK LDLP  +V+DLI FGAVYY
Sbjct: 78   SSDSFRKYDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLPPLYVSDLIQFGAVYY 137

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PPP+AT EQIRVFKEVT PS LRKR S+KGKTVREAQKTFR+THV++FVE GTY
Sbjct: 138  ALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTY 197

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKR PRCYEIDW+SRII V ESYVVLDKPAGTSVGGTTDNIEESCATFA+RALG
Sbjct: 198  LRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 257

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            +TTPL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIREKKVKK Y          GI++HY
Sbjct: 258  MTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFPLPTGIITHY 317

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+++APR++++DFI+GWHLCQLEVLEC++VPWP+  I+++YC+++CGWP +  AYECK
Sbjct: 318  MRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWPSQDYAYECK 377

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTG+THQ+R Q AA  AP++GDSMY+PA +A  ++PG+NPFG ++K ++SE  +  A
Sbjct: 378  INLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDFSSESEKETA 437

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            + +WI QHGKEPSVAIGLQACQISWDD++H Y A SPWWR
Sbjct: 438  VVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWR 477


>gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus guttatus]
          Length = 483

 Score =  641 bits (1654), Expect = 0.0
 Identities = 292/402 (72%), Positives = 342/402 (85%), Gaps = 2/402 (0%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            ++N YP Y RLLPCP +NGPPRVEH VVTEGG VLDYI K+L++P PFVADLIHFGAV+Y
Sbjct: 82   NNNSYPPYGRLLPCPSQNGPPRVEHFVVTEGGPVLDYISKSLNIPSPFVADLIHFGAVFY 141

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PPP+ATPEQI  FKE T PS LRKR S+KGKT REAQKTFRI+  +EFVE GTY
Sbjct: 142  ALVCPDPPPTATPEQINFFKEYTDPSLLRKRSSIKGKTFREAQKTFRISRTDEFVETGTY 201

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCYE DW+SR+IAV ESYVVLDKPAGTSVGGTTDNIEESC TF +RALG
Sbjct: 202  LRVHVHPKRFPRCYETDWRSRVIAVAESYVVLDKPAGTSVGGTTDNIEESCVTFTTRALG 261

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            L  PL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIREKKVKKLY         +G+++HY
Sbjct: 262  LEAPLITTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVSIGVITHY 321

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRPVNIAPR+V++D + GWHLCQLEVLEC+++PWPS++ EE+  V++CGWP K  AYECK
Sbjct: 322  MRPVNIAPRLVSEDLVNGWHLCQLEVLECRKIPWPSSIAEEKNRVEDCGWPSKDFAYECK 381

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            +NLLTGRTHQ+R Q AACGAP+VGDSMY+PA +AE   P +NPFG ++K+Y S+D ++ A
Sbjct: 382  VNLLTGRTHQIRAQFAACGAPLVGDSMYMPAAIAEVDRPELNPFGKNKKEYASDDIKAVA 441

Query: 425  IEDWIVQHGKEPSVAIGLQACQISW--DDEQHLYRAGSPWWR 306
            +E+WI +HGKEP VAIGLQAC+ISW  D+EQH Y AG PWWR
Sbjct: 442  VEEWIARHGKEPIVAIGLQACKISWDSDEEQHSYEAGRPWWR 483


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  637 bits (1643), Expect = e-180
 Identities = 293/400 (73%), Positives = 346/400 (86%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            SSNG+ +Y RL+PCPL+N PPRVEHLVVT+ G VL+YICK LDLP  +V DLI FGAVYY
Sbjct: 84   SSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVLEYICKALDLPPLYVEDLIQFGAVYY 143

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PPP+A+PEQI+V++EVT PS LR+R S+KGKTVREAQKTF+IT  +E VEAGTY
Sbjct: 144  ALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRADEIVEAGTY 203

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCY+IDWKSRIIAVT+ YVVLDKPAGTSVGGTTDNIEESCATFA+RALG
Sbjct: 204  LRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALG 263

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
             + PL TTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLY         +GI++HY
Sbjct: 264  FSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAPVPIGILTHY 323

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+N+APR+V++DF++GW LCQLEVLECK+VPWPS+ I+  Y +++CGW  K  AYEC+
Sbjct: 324  MRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGWALKDFAYECQ 383

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTGRTHQ+R QLAAC AP+VGDSMY+PA +AE   PG NPFG ++K Y++E+++S A
Sbjct: 384  INLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLYSNENDKSLA 443

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            I++WI QHGKEPSVA+GLQACQISWDD QH Y A  PWWR
Sbjct: 444  IDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 483


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
            lycopersicum]
          Length = 448

 Score =  636 bits (1640), Expect = e-180
 Identities = 291/400 (72%), Positives = 346/400 (86%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            SSNG+ +Y RL+PCPL+N PPRVEHLVVT+ G V++YICK LDLP  +V DLI FGAVYY
Sbjct: 49   SSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVVEYICKALDLPPLYVEDLIQFGAVYY 108

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PPP+A+PEQI+V++EVT PS LRKR S+KGKTVREAQKTF+IT  +E VEAGTY
Sbjct: 109  ALVCPKPPPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKITRADEIVEAGTY 168

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCY+IDWKSRIIAVT+ YVVLDKPAGTSVGGTTDNIEESCATFA+RALG
Sbjct: 169  LRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALG 228

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
             + PL TTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKV+KLY         +GI++HY
Sbjct: 229  FSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVRKLYLALAAAPVPIGILTHY 288

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+N+APR+V++DF++GW LCQLEVLEC++VPWPS+ I+  Y +++CGW  K  AYEC+
Sbjct: 289  MRPINMAPRLVSRDFVKGWLLCQLEVLECQKVPWPSSEIQRTYNLEDCGWALKDYAYECQ 348

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTGRTHQ+R QLAAC AP+VGDSMY+PA +AE   PG NPFG ++K Y++E+++S A
Sbjct: 349  INLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLYSNENDKSLA 408

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            I++WI QHGKEPSVA+GLQACQISWDD QH Y A  PWWR
Sbjct: 409  IDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARMPWWR 448


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  635 bits (1638), Expect = e-179
 Identities = 292/400 (73%), Positives = 344/400 (86%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            + NGYP+Y RLLPCP  + PPRVEH+VV E G V++YICK+L+LP  +VADLIHFGAVYY
Sbjct: 72   AENGYPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYY 131

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PP +ATPEQIR+FK+ T PS L+ R S+KGKTVREAQKTFRITHV+EFVE GTY
Sbjct: 132  ALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTY 191

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFA+RALG
Sbjct: 192  LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 251

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            LT+PL TTHQIDNCTEGCV+ AR+KEYCS+FHGKIREKKV KLY         +GI++HY
Sbjct: 252  LTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHY 311

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+NIAPR+V+KD I GW +CQLEVLEC+EV WP A IE +Y V++CGWP K+ AYEC+
Sbjct: 312  MRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADIEAKYRVEDCGWPSKKKAYECR 371

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTGRTHQ+R QLA CGAP+VGDSMY+PAV+AE  SPG+NPFG  +K+YT+E+++  A
Sbjct: 372  INLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTNEEDKETA 431

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            + +W   HGKEP+VAIGLQA +ISWD  +H Y AG+PWWR
Sbjct: 432  VAEWSALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  633 bits (1633), Expect = e-179
 Identities = 290/400 (72%), Positives = 343/400 (85%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            + NGYP+Y RLLPCP  + PPRVEH+VV E G V++YICK+L+LP  +VADLIHFGAVYY
Sbjct: 72   AENGYPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYY 131

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PP +ATPEQIR+FK  T PS L+ R S+KGKTVREAQKTFRITHV+EFVE GTY
Sbjct: 132  ALVCPQPPKTATPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTY 191

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFA+RALG
Sbjct: 192  LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 251

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            LT+PL TTHQIDNCTEGCV+ AR+KEYCS+FHGKIREKKV KLY         +GI++HY
Sbjct: 252  LTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHY 311

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP+NIAPR+V+KD I GW +CQLEVLEC+EV WP A  E +Y V++CGWP K+ AYEC+
Sbjct: 312  MRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADTEAKYRVEDCGWPSKKKAYECR 371

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTGRTHQ+R QLA CGAP+VGDSMY+PAV+AE  SPG+NPFG  +K+YT+E+++  +
Sbjct: 372  INLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTNEEDKETS 431

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            + +W   HGKEP+VAIGLQA +ISWD  +H+Y AG+PWWR
Sbjct: 432  VAEWSALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWR 471


>ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cicer arietinum]
          Length = 467

 Score =  625 bits (1612), Expect = e-176
 Identities = 284/411 (69%), Positives = 339/411 (82%), Gaps = 12/411 (2%)
 Frame = -1

Query: 1502 SNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYYA 1323
            S  YPKY+RLLPCP    PPR+EH+VV+EGG VL+YICK LDLP  FVADLI FGAVY+A
Sbjct: 56   SLSYPKYNRLLPCPTHKIPPRIEHIVVSEGGPVLEYICKALDLPPLFVADLIKFGAVYFA 115

Query: 1322 MVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTYL 1143
            +VCP+PPP+AT E+IRVFK+ T P  LRKR S+KGKT+REAQKTF +T V++FVE GTYL
Sbjct: 116  LVCPKPPPTATAEEIRVFKKATEPLVLRKRASIKGKTIREAQKTFLVTDVDQFVEPGTYL 175

Query: 1142 RVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALGL 963
            RVHVHPKRFPRCYEIDW+SRIIAV ESYV+LDKPAGTSVGGTT N EESCA FA+RAL L
Sbjct: 176  RVHVHPKRFPRCYEIDWRSRIIAVEESYVILDKPAGTSVGGTTGNTEESCANFATRALEL 235

Query: 962  TTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHYM 783
            TTPL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIREKKVKK+Y          GI+ HYM
Sbjct: 236  TTPLMTTHQIDNCTEGCVVLARNKEYCSVFHGKIREKKVKKIYLALAASPLPTGIIKHYM 295

Query: 782  RPVNIAPRVVTKD------------FIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCG 639
            RP+N+APR++++             F +GWH+CQLEVLEC ++PWP+ +++E+YCV++CG
Sbjct: 296  RPINMAPRLISEGXTTQIGMHSKDYFNKGWHICQLEVLECIKIPWPTTVVQEKYCVEDCG 355

Query: 638  WPCKQVAYECKINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRK 459
            WP +  AYECKINLLTGRTHQ+R Q AAC AP++GDSMY+PA +AE  +PG+NPFG ++K
Sbjct: 356  WPSQDYAYECKINLLTGRTHQIRAQFAACKAPLIGDSMYMPAAIAEMMNPGLNPFGKYKK 415

Query: 458  QYTSEDNRSKAIEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
             +TSE  +  A+ +WI QHGKEPSVAIGLQACQISWDD +H+Y AGSPWWR
Sbjct: 416  DFTSESEKETAVINWIAQHGKEPSVAIGLQACQISWDDGEHIYEAGSPWWR 466


>ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [Amborella trichopoda]
            gi|548862161|gb|ERN19525.1| hypothetical protein
            AMTR_s00062p00043970 [Amborella trichopoda]
          Length = 477

 Score =  621 bits (1601), Expect = e-175
 Identities = 286/399 (71%), Positives = 332/399 (83%)
 Frame = -1

Query: 1502 SNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYYA 1323
            SN YP Y+ LLPCP +NGPPR+EHL+V+EGG VLDYICK LDLP  FVADLIHFGAVYYA
Sbjct: 77   SNVYPGYTSLLPCPSKNGPPRIEHLIVSEGGPVLDYICKALDLPTLFVADLIHFGAVYYA 136

Query: 1322 MVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTYL 1143
            +V PEPPPSATPEQ+++FKE TA S LRKR SLKGKTVREAQKTFRITH NEFVE GTYL
Sbjct: 137  LVSPEPPPSATPEQVKLFKEATARSVLRKRASLKGKTVREAQKTFRITHANEFVEEGTYL 196

Query: 1142 RVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALGL 963
            RV+VHPKRFPRCYEIDW+SR+IA TESYVVLDKPA T+VGGT  NIEE CATF SRALGL
Sbjct: 197  RVYVHPKRFPRCYEIDWRSRVIAETESYVVLDKPAATTVGGTPCNIEECCATFVSRALGL 256

Query: 962  TTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHYM 783
              PL+TTHQIDNCTEGCVV +++KE+CS+FHGKIREK+VKKLY         +G++SHYM
Sbjct: 257  DFPLRTTHQIDNCTEGCVVFSKTKEFCSIFHGKIREKQVKKLYLALATAPVPVGVISHYM 316

Query: 782  RPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECKI 603
            RPVN APR+++KD I GWHLCQLEVLECKEVPWP A +E Q  V++CGWP K  AYECKI
Sbjct: 317  RPVNRAPRIISKDHIGGWHLCQLEVLECKEVPWPRAAVEAQNGVEDCGWPSKDFAYECKI 376

Query: 602  NLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKAI 423
            NLLTGRTHQ+R QLAACGAPIVGD+MY+PA + E A P +NPF +   +   ++++ +A+
Sbjct: 377  NLLTGRTHQIRAQLAACGAPIVGDTMYLPASIKEIAFPNINPFCEANSESMCDESKGEAV 436

Query: 422  EDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            E+WI QHGKEP+ AIGLQAC+ISWD     Y A +PWWR
Sbjct: 437  EEWIAQHGKEPNAAIGLQACEISWDGGACFYTARAPWWR 475


>ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  620 bits (1600), Expect = e-175
 Identities = 284/400 (71%), Positives = 342/400 (85%)
 Frame = -1

Query: 1505 SSNGYPKYSRLLPCPLENGPPRVEHLVVTEGGRVLDYICKTLDLPQPFVADLIHFGAVYY 1326
            + NGYP+Y RLLPC   N PPRVEHLVV EGG V++YI K+LDLP  +VADLIHFGAVYY
Sbjct: 72   AENGYPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYY 131

Query: 1325 AMVCPEPPPSATPEQIRVFKEVTAPSALRKRISLKGKTVREAQKTFRITHVNEFVEAGTY 1146
            A+VCP+PPP+A+ E+IR+FK+ T PS L  R S+KGKT+REAQKTFRITH++EFVE GTY
Sbjct: 132  ALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTY 191

Query: 1145 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALG 966
            LRV+VHPKRFPRCYE+DWKSRIIAVT+SYVVLDKPAGTSVGGTT+NIEE+C TFA+RALG
Sbjct: 192  LRVYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALG 251

Query: 965  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYXXXXXXXXXLGIVSHY 786
            LT+PL TTHQIDNCTEGCV+LAR+KEYCS+FH KIREKKV KLY          GI++HY
Sbjct: 252  LTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVTKLYLALVAVPLPKGIMTHY 311

Query: 785  MRPVNIAPRVVTKDFIQGWHLCQLEVLECKEVPWPSALIEEQYCVDNCGWPCKQVAYECK 606
            MRP N+APR+V++D I GW+LCQLEVLEC+EV WP A IE +Y +++CGWP K+ A+ECK
Sbjct: 312  MRPNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCGWPSKKKAFECK 371

Query: 605  INLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEKASPGVNPFGDHRKQYTSEDNRSKA 426
            INLLTGRTHQ+R QLA CGAP+VGDSMY+PAV+AE A+PG+NPFG  +K+YTSE+++  A
Sbjct: 372  INLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMANPGLNPFGKCKKEYTSEEDKENA 431

Query: 425  IEDWIVQHGKEPSVAIGLQACQISWDDEQHLYRAGSPWWR 306
            + +WI  HGKEP+VAIGLQA +ISWD  +H Y AG+PWWR
Sbjct: 432  VAEWIALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471