BLASTX nr result
ID: Sinomenium21_contig00016296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00016296
(449 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 61 2e-07
ref|XP_007034655.1| RING-H2 group F1A, putative isoform 3 [Theob... 60 4e-07
ref|XP_007034653.1| RING-H2 group F1A, putative isoform 1 [Theob... 60 4e-07
ref|XP_006378404.1| hypothetical protein POPTR_0010s10240g [Popu... 59 9e-07
ref|XP_002314719.2| zinc finger family protein [Populus trichoca... 59 9e-07
ref|XP_002312516.2| hypothetical protein POPTR_0008s14860g [Popu... 58 1e-06
gb|ABR18468.1| unknown [Picea sitchensis] 55 8e-06
>ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Vitis vinifera]
gi|297737001|emb|CBI26202.3| unnamed protein product
[Vitis vinifera]
Length = 391
Score = 60.8 bits (146), Expect = 2e-07
Identities = 49/139 (35%), Positives = 64/139 (46%)
Frame = +1
Query: 4 RSRQRSSNTIRFAHVSPEDFDFDHVAPYEDDLEFDENIMRQLAAAAMGXXXXXXXXXXXX 183
RSR S F H DF +DH A Y DD + DE+IM+ + AAA G
Sbjct: 94 RSRNSSPTESTFLHHFQGDFGYDHDASYSDDSDLDEHIMQHVVAAASG-APYVHRRERQR 152
Query: 184 XXGLDPSQFLVFAAPSHGTNAQQTFTDTPTESLIVGNSTPESNSPSAVMPSETSERYNHL 363
GL PS+ LVF P+ + Q T +P E G+ + ESNSP+ S+ S
Sbjct: 153 SSGLGPSESLVF-PPTDVPDVQTINTPSPEEYQNSGSVSSESNSPA---HSDQSAINAQP 208
Query: 364 PSSARSSLANTGSETTDSR 420
SS S+ N S T +R
Sbjct: 209 LSSGVPSVVNMVSSTAANR 227
>ref|XP_007034655.1| RING-H2 group F1A, putative isoform 3 [Theobroma cacao]
gi|508713684|gb|EOY05581.1| RING-H2 group F1A, putative
isoform 3 [Theobroma cacao]
Length = 432
Score = 59.7 bits (143), Expect = 4e-07
Identities = 46/148 (31%), Positives = 66/148 (44%)
Frame = +1
Query: 4 RSRQRSSNTIRFAHVSPEDFDFDHVAPYEDDLEFDENIMRQLAAAAMGXXXXXXXXXXXX 183
RSR S + H + F + A + DD +FDE I++ LAAAA
Sbjct: 115 RSRNPSPAVLIDFHHFHDGFGAEEDASHSDDSDFDERILQHLAAAA-SRARYVRRRERQR 173
Query: 184 XXGLDPSQFLVFAAPSHGTNAQQTFTDTPTESLIVGNSTPESNSPSAVMPSETSERYNHL 363
GLDPSQ L F +P H + QQT +P E + + +S ++V+P+ +
Sbjct: 174 SFGLDPSQVLFFTSPEHMLHTQQTNPTSPDECQNLRYGLSQPDSLASVIPNVDPPLPVNP 233
Query: 364 PSSARSSLANTGSETTDSRGIASQTPPR 447
SS A +G + DSR TP R
Sbjct: 234 SVDVVSSSAVSGDKAIDSRQPQVDTPHR 261
>ref|XP_007034653.1| RING-H2 group F1A, putative isoform 1 [Theobroma cacao]
gi|508713682|gb|EOY05579.1| RING-H2 group F1A, putative
isoform 1 [Theobroma cacao]
Length = 407
Score = 59.7 bits (143), Expect = 4e-07
Identities = 46/148 (31%), Positives = 66/148 (44%)
Frame = +1
Query: 4 RSRQRSSNTIRFAHVSPEDFDFDHVAPYEDDLEFDENIMRQLAAAAMGXXXXXXXXXXXX 183
RSR S + H + F + A + DD +FDE I++ LAAAA
Sbjct: 115 RSRNPSPAVLIDFHHFHDGFGAEEDASHSDDSDFDERILQHLAAAA-SRARYVRRRERQR 173
Query: 184 XXGLDPSQFLVFAAPSHGTNAQQTFTDTPTESLIVGNSTPESNSPSAVMPSETSERYNHL 363
GLDPSQ L F +P H + QQT +P E + + +S ++V+P+ +
Sbjct: 174 SFGLDPSQVLFFTSPEHMLHTQQTNPTSPDECQNLRYGLSQPDSLASVIPNVDPPLPVNP 233
Query: 364 PSSARSSLANTGSETTDSRGIASQTPPR 447
SS A +G + DSR TP R
Sbjct: 234 SVDVVSSSAVSGDKAIDSRQPQVDTPHR 261
>ref|XP_006378404.1| hypothetical protein POPTR_0010s10240g [Populus trichocarpa]
gi|550329497|gb|ERP56201.1| hypothetical protein
POPTR_0010s10240g [Populus trichocarpa]
Length = 405
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +1
Query: 1 LRSRQRSSNTIRFAHVSPEDFDFDHVAPYEDDLEFDENIMRQLAAAAMGXXXXXXXXXXX 180
LRSR + ++ H+ +D+D + + Y DD +FDE+IM+ LAAAA
Sbjct: 109 LRSRNSTPASMIVPHLD-DDYDVEQDS-YSDDSDFDEHIMQHLAAAASSRAHHVHERERQ 166
Query: 181 XXXGLDPSQFLVFAAPSHGTNAQQTFTDTPT-ESLIVGNSTPESNSPSAV 327
GL PSQ + F +P H QQT T ++LI G+S S +P +
Sbjct: 167 RSNGLGPSQVIAFTSPEHVATVQQTCTSPEEGQTLIHGSSVINSPTPDTL 216
>ref|XP_002314719.2| zinc finger family protein [Populus trichocarpa]
gi|550329496|gb|EEF00890.2| zinc finger family protein
[Populus trichocarpa]
Length = 418
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +1
Query: 1 LRSRQRSSNTIRFAHVSPEDFDFDHVAPYEDDLEFDENIMRQLAAAAMGXXXXXXXXXXX 180
LRSR + ++ H+ +D+D + + Y DD +FDE+IM+ LAAAA
Sbjct: 109 LRSRNSTPASMIVPHLD-DDYDVEQDS-YSDDSDFDEHIMQHLAAAASSRAHHVHERERQ 166
Query: 181 XXXGLDPSQFLVFAAPSHGTNAQQTFTDTPT-ESLIVGNSTPESNSPSAV 327
GL PSQ + F +P H QQT T ++LI G+S S +P +
Sbjct: 167 RSNGLGPSQVIAFTSPEHVATVQQTCTSPEEGQTLIHGSSVINSPTPDTL 216
>ref|XP_002312516.2| hypothetical protein POPTR_0008s14860g [Populus trichocarpa]
gi|550333097|gb|EEE89883.2| hypothetical protein
POPTR_0008s14860g [Populus trichocarpa]
Length = 385
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Frame = +1
Query: 10 RQRSSNTIRF-AHVSPEDFDFDHVAPYEDDLEFDENIMRQLAAAAMGXXXXXXXXXXXXX 186
R R+SN H ED+D + + Y DD +FD+++M+ L+A+A
Sbjct: 107 RPRNSNPASMIVHHLDEDYDVEQDS-YSDDSDFDDHVMQHLSASAASRARYVCKRERHRS 165
Query: 187 XGLDPSQFLVFAAPSHGTNAQQTFTDTPTESLIVGNSTPESNSPSAVMPS 336
GL PSQ LVF +P H + QQT T +P E I+ + NS + PS
Sbjct: 166 TGLGPSQVLVFTSPEHVSTVQQTCT-SPEEGQILSYGSSVINSSTPGTPS 214
>gb|ABR18468.1| unknown [Picea sitchensis]
Length = 423
Score = 55.5 bits (132), Expect = 8e-06
Identities = 48/157 (30%), Positives = 62/157 (39%), Gaps = 15/157 (9%)
Frame = +1
Query: 16 RSSNTIRFAHVSPEDFDFDHVAPYEDDLEFDENIMRQLAAAAMG--XXXXXXXXXXXXXX 189
RS NT FA S ++ +F HV Y DD +F+E IM+ LAAAAMG
Sbjct: 98 RSPNTPIFARNSVDEIEFHHVPAYTDDSDFEERIMQHLAAAAMGRAHHFSRRENLRHRSS 157
Query: 190 GLDPSQFLVF-----AAPSHGTNAQ------QTFT--DTPTESLIVGNSTPESNSPSAVM 330
G QFLVF A P N + TFT D+ T ++ + P
Sbjct: 158 GQGHPQFLVFSTHPNAPPISPNNIEAQDGNIPTFTSLDSTTPAMTATSEEQLQQGPLPSP 217
Query: 331 PSETSERYNHLPSSARSSLANTGSETTDSRGIASQTP 441
P + + R N A L N T Q+P
Sbjct: 218 PGQMNSRANRNTGIAVQGLDNRSEPFTPRNNAGQQSP 254