BLASTX nr result
ID: Sinomenium21_contig00016293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00016293
(252 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354957.1| PREDICTED: polyadenylate-binding protein RBP... 99 8e-19
ref|XP_004238180.1| PREDICTED: polyadenylate-binding protein RBP... 99 8e-19
emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum] 97 2e-18
gb|EXB75612.1| Polyadenylate-binding protein RBP47C [Morus notab... 96 5e-18
ref|XP_004291135.1| PREDICTED: polyadenylate-binding protein RBP... 95 1e-17
ref|XP_007222286.1| hypothetical protein PRUPE_ppa005903mg [Prun... 95 1e-17
ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP... 94 1e-17
ref|XP_006374988.1| RNA-binding protein 47 [Populus trichocarpa]... 94 1e-17
gb|EYU36286.1| hypothetical protein MIMGU_mgv1a005576mg [Mimulus... 93 4e-17
ref|XP_004501589.1| PREDICTED: polyadenylate-binding protein RBP... 92 6e-17
ref|XP_003523906.1| PREDICTED: polyadenylate-binding protein RBP... 92 6e-17
ref|XP_007017333.1| RNA-binding protein 47C isoform 5 [Theobroma... 92 7e-17
ref|XP_007017332.1| RNA-binding protein 47C isoform 4, partial [... 92 7e-17
ref|XP_007017331.1| RNA-binding protein 47C isoform 3 [Theobroma... 92 7e-17
ref|XP_007017330.1| RNA-binding protein 47C isoform 2 [Theobroma... 92 7e-17
ref|XP_007017329.1| RNA-binding protein 47C isoform 1 [Theobroma... 92 7e-17
ref|XP_003528246.1| PREDICTED: polyadenylate-binding protein RBP... 92 7e-17
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici... 92 7e-17
ref|XP_002302445.2| RNA-binding protein 47 [Populus trichocarpa]... 92 1e-16
ref|XP_007160823.1| hypothetical protein PHAVU_001G019600g [Phas... 91 1e-16
>ref|XP_006354957.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Solanum
tuberosum]
Length = 438
Score = 98.6 bits (244), Expect = 8e-19
Identities = 52/83 (62%), Positives = 56/83 (67%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERSSA++EMNGVYCSSRPMRIG ATPRK
Sbjct: 233 TGRSKGYGFVRFGDDNERSSAMNEMNGVYCSSRPMRIGAATPRKSSGYPQQYSSQGGYSN 292
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
QPD+D TNTTIFVG
Sbjct: 293 GGPVQGS--QPDADSTNTTIFVG 313
>ref|XP_004238180.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Solanum
lycopersicum]
Length = 451
Score = 98.6 bits (244), Expect = 8e-19
Identities = 52/83 (62%), Positives = 56/83 (67%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERSSA++EMNGVYCSSRPMRIG ATPRK
Sbjct: 246 TGRSKGYGFVRFGDDNERSSAMNEMNGVYCSSRPMRIGAATPRKSSGYPQQYSSQGGYSN 305
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
QPD+D TNTTIFVG
Sbjct: 306 GGPAQGS--QPDADSTNTTIFVG 326
>emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/83 (61%), Positives = 55/83 (66%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 248 TGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYSN 307
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
QPD+D TNTTIFVG
Sbjct: 308 GGPAQGS--QPDADSTNTTIFVG 328
>gb|EXB75612.1| Polyadenylate-binding protein RBP47C [Morus notabilis]
Length = 423
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/83 (62%), Positives = 55/83 (66%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A+SEMNGVYCSSRPMRIG ATPRK
Sbjct: 222 TGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRK------SSGYHNGGYA 275
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
GFQ D D +NTTIFVG
Sbjct: 276 SNGASTQGFQSDGDSSNTTIFVG 298
>ref|XP_004291135.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Fragaria
vesca subsp. vesca]
Length = 444
Score = 94.7 bits (234), Expect = 1e-17
Identities = 51/83 (61%), Positives = 55/83 (66%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGD++ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 238 TGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRK-----SSGYQQQGGYA 292
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
GFQ D D TNTTIFVG
Sbjct: 293 LNGTPTQGFQSDGDATNTTIFVG 315
>ref|XP_007222286.1| hypothetical protein PRUPE_ppa005903mg [Prunus persica]
gi|462419222|gb|EMJ23485.1| hypothetical protein
PRUPE_ppa005903mg [Prunus persica]
Length = 438
Score = 94.7 bits (234), Expect = 1e-17
Identities = 51/83 (61%), Positives = 55/83 (66%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGD++ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 231 TGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRK-SSGYQQQYSSQGGYV 289
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
GFQ D D TNTTIFVG
Sbjct: 290 SNGTPTQGFQSDGDSTNTTIFVG 312
>ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus] gi|449498692|ref|XP_004160607.1| PREDICTED:
polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 94.4 bits (233), Expect = 1e-17
Identities = 48/83 (57%), Positives = 53/83 (63%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A++EMNG+YCSSRPMRIG ATPRK
Sbjct: 215 TGRSKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYS 274
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
G Q + D NTTIFVG
Sbjct: 275 TNGYFSQGLQSEGDSANTTIFVG 297
>ref|XP_006374988.1| RNA-binding protein 47 [Populus trichocarpa]
gi|550323302|gb|ERP52785.1| RNA-binding protein 47
[Populus trichocarpa]
Length = 429
Score = 94.4 bits (233), Expect = 1e-17
Identities = 51/83 (61%), Positives = 54/83 (65%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDDSER+ A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 224 TGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAATPRK-----SSGYQQQGGYG 278
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
GFQ D D NTTIFVG
Sbjct: 279 SNGASAQGFQSDGDSNNTTIFVG 301
>gb|EYU36286.1| hypothetical protein MIMGU_mgv1a005576mg [Mimulus guttatus]
Length = 478
Score = 92.8 bits (229), Expect = 4e-17
Identities = 51/84 (60%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRK-XXXXXXXXXXXXXXX 74
TGRSKGYGFVRFGDDSER A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 355 TGRSKGYGFVRFGDDSERLQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSPQVGGGG 414
Query: 73 XXXXXXXXGFQPDSDPTNTTIFVG 2
GFQ D D NTTIFVG
Sbjct: 415 YLNGVSAQGFQSDGDSVNTTIFVG 438
>ref|XP_004501589.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cicer
arietinum]
Length = 413
Score = 92.4 bits (228), Expect = 6e-17
Identities = 49/83 (59%), Positives = 54/83 (65%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 215 TGRSKGYGFVRFGDDNERSQAMNEMNGVYCSSRPMRIGAATPRKSSGYQQGGQSNGTSS- 273
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
Q ++D TNTTIFVG
Sbjct: 274 ---------QSEADSTNTTIFVG 287
>ref|XP_003523906.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Glycine max]
Length = 409
Score = 92.4 bits (228), Expect = 6e-17
Identities = 49/83 (59%), Positives = 54/83 (65%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 211 TGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQQGSQSNGTSS- 269
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
Q ++D TNTTIFVG
Sbjct: 270 ---------QSEADSTNTTIFVG 283
>ref|XP_007017333.1| RNA-binding protein 47C isoform 5 [Theobroma cacao]
gi|508722661|gb|EOY14558.1| RNA-binding protein 47C
isoform 5 [Theobroma cacao]
Length = 380
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/83 (59%), Positives = 53/83 (63%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 229 TGRSKGYGFVRFGDDTERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS 288
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
Q D D +NTTIFVG
Sbjct: 289 NGASN----QSDGDSSNTTIFVG 307
>ref|XP_007017332.1| RNA-binding protein 47C isoform 4, partial [Theobroma cacao]
gi|508722660|gb|EOY14557.1| RNA-binding protein 47C
isoform 4, partial [Theobroma cacao]
Length = 387
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/83 (59%), Positives = 53/83 (63%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 229 TGRSKGYGFVRFGDDTERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS 288
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
Q D D +NTTIFVG
Sbjct: 289 NGASN----QSDGDSSNTTIFVG 307
>ref|XP_007017331.1| RNA-binding protein 47C isoform 3 [Theobroma cacao]
gi|508722659|gb|EOY14556.1| RNA-binding protein 47C
isoform 3 [Theobroma cacao]
Length = 436
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/83 (59%), Positives = 53/83 (63%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 229 TGRSKGYGFVRFGDDTERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQEGGYA 288
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
Q D D +NTTIFVG
Sbjct: 289 SNGASN---QSDGDSSNTTIFVG 308
>ref|XP_007017330.1| RNA-binding protein 47C isoform 2 [Theobroma cacao]
gi|508722658|gb|EOY14555.1| RNA-binding protein 47C
isoform 2 [Theobroma cacao]
Length = 394
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/83 (59%), Positives = 53/83 (63%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 229 TGRSKGYGFVRFGDDTERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS 288
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
Q D D +NTTIFVG
Sbjct: 289 NGASN----QSDGDSSNTTIFVG 307
>ref|XP_007017329.1| RNA-binding protein 47C isoform 1 [Theobroma cacao]
gi|508722657|gb|EOY14554.1| RNA-binding protein 47C
isoform 1 [Theobroma cacao]
Length = 435
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/83 (59%), Positives = 53/83 (63%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 229 TGRSKGYGFVRFGDDTERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS 288
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
Q D D +NTTIFVG
Sbjct: 289 NGASN----QSDGDSSNTTIFVG 307
>ref|XP_003528246.1| PREDICTED: polyadenylate-binding protein RBP47C'-like [Glycine max]
Length = 410
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/83 (59%), Positives = 53/83 (63%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD ERS A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 209 TGRSKGYGFVRFGDDDERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQQGSQSNGISS- 267
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
Q ++D TNTTIFVG
Sbjct: 268 ---------QSEADSTNTTIFVG 281
>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding
protein, putative [Ricinus communis]
Length = 443
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/83 (59%), Positives = 53/83 (63%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ER+ A++EMNGVYCSSR MRIG ATPRK
Sbjct: 240 TGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATPRK-----STGYQHQGGYV 294
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
FQ D D TNTTIFVG
Sbjct: 295 SNGASGQAFQADGDSTNTTIFVG 317
>ref|XP_002302445.2| RNA-binding protein 47 [Populus trichocarpa]
gi|550344888|gb|EEE81718.2| RNA-binding protein 47
[Populus trichocarpa]
Length = 429
Score = 91.7 bits (226), Expect = 1e-16
Identities = 49/83 (59%), Positives = 54/83 (65%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ER+ A++EMNGVYCSSRPMRIG ATPRK
Sbjct: 227 TGRSKGYGFVRFGDDTERTQAMTEMNGVYCSSRPMRIGAATPRK-----SSGYQQQGGYG 281
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
GFQ D D +N TIFVG
Sbjct: 282 SNGASSQGFQSDGDSSNATIFVG 304
>ref|XP_007160823.1| hypothetical protein PHAVU_001G019600g [Phaseolus vulgaris]
gi|561034287|gb|ESW32817.1| hypothetical protein
PHAVU_001G019600g [Phaseolus vulgaris]
Length = 415
Score = 91.3 bits (225), Expect = 1e-16
Identities = 48/83 (57%), Positives = 54/83 (65%)
Frame = -3
Query: 250 TGRSKGYGFVRFGDDSERSSAVSEMNGVYCSSRPMRIGLATPRKXXXXXXXXXXXXXXXX 71
TGRSKGYGFVRFGDD+ERS A+++MNGVYCSSRPMRIG ATPRK
Sbjct: 218 TGRSKGYGFVRFGDDNERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGQSNGTSS- 276
Query: 70 XXXXXXXGFQPDSDPTNTTIFVG 2
Q ++D TNTTIFVG
Sbjct: 277 ---------QSEADSTNTTIFVG 290