BLASTX nr result
ID: Sinomenium21_contig00016195
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00016195
(517 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006407787.1| hypothetical protein EUTSA_v10020831mg [Eutr... 64 2e-08
ref|XP_002320506.1| F-box family protein [Populus trichocarpa] g... 64 2e-08
ref|XP_006297777.1| hypothetical protein CARUB_v10013813mg [Caps... 62 8e-08
ref|XP_002301588.1| hypothetical protein POPTR_0002s22050g [Popu... 62 8e-08
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub... 62 1e-07
ref|XP_007049219.1| F-box and associated interaction domains-con... 61 1e-07
emb|CBI28934.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi... 61 1e-07
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578... 60 4e-07
ref|XP_006352014.1| PREDICTED: F-box protein At3g07870-like [Sol... 57 3e-06
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ... 56 4e-06
ref|XP_007211962.1| hypothetical protein PRUPE_ppa006542mg [Prun... 56 6e-06
ref|XP_004252041.1| PREDICTED: F-box protein At3g07870-like [Sol... 55 1e-05
>ref|XP_006407787.1| hypothetical protein EUTSA_v10020831mg [Eutrema salsugineum]
gi|557108933|gb|ESQ49240.1| hypothetical protein
EUTSA_v10020831mg [Eutrema salsugineum]
Length = 411
Score = 63.9 bits (154), Expect = 2e-08
Identities = 25/57 (43%), Positives = 41/57 (71%)
Frame = +1
Query: 49 LKPLCISKNGEILLDKDGEHLILYDPKDGRVRNISIHGLPNWYETEIYVGSLVTLNT 219
++ LC+ +NGEILL+ L+ YDPK G+ +++ +HG+PNW+ T ++VG+L NT
Sbjct: 351 VRVLCVLENGEILLEYKSRVLVAYDPKLGKFKDLVVHGMPNWFHTVVHVGTLSWFNT 407
>ref|XP_002320506.1| F-box family protein [Populus trichocarpa]
gi|222861279|gb|EEE98821.1| F-box family protein
[Populus trichocarpa]
Length = 422
Score = 63.9 bits (154), Expect = 2e-08
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = +1
Query: 58 LCISKNGEILLDKDGEHLILYDPKDGRVRNISIHGLPNWYETEIYVGSLVTLNT 219
LC+ KNGEILL+ L+ YDPK+G+ ++I + G PNW++T ++VGSL ++T
Sbjct: 353 LCVLKNGEILLEYKNRVLVSYDPKNGKFKDIELQGAPNWFQTVVHVGSLNWIDT 406
>ref|XP_006297777.1| hypothetical protein CARUB_v10013813mg [Capsella rubella]
gi|482566486|gb|EOA30675.1| hypothetical protein
CARUB_v10013813mg [Capsella rubella]
Length = 416
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = +1
Query: 49 LKPLCISKNGEILLDKDGEHLILYDPKDGRVRNISIHGLPNWYETEIYVGSLVTLNT 219
++ LC+ +NGEILL+ L+ YDPK G+ +++ HGLPNW+ T ++VG+L +T
Sbjct: 356 VRVLCVLENGEILLEYKSRVLVAYDPKVGKFKDLLFHGLPNWFHTVVHVGTLSWFDT 412
>ref|XP_002301588.1| hypothetical protein POPTR_0002s22050g [Populus trichocarpa]
gi|222843314|gb|EEE80861.1| hypothetical protein
POPTR_0002s22050g [Populus trichocarpa]
Length = 408
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = +1
Query: 49 LKPLCISKNGEILLDKDGEHLILYDPKDGRVRNISIHGLPNWYETEIYVGSLVTLNT 219
++ LC+ KNGEILL+ L+ YDPK G+ ++I + G P W++T ++VGSL ++T
Sbjct: 349 VRALCVLKNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGSLNWIDT 405
>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328394|gb|EFH58813.1| F-box family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 415
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/57 (43%), Positives = 41/57 (71%)
Frame = +1
Query: 49 LKPLCISKNGEILLDKDGEHLILYDPKDGRVRNISIHGLPNWYETEIYVGSLVTLNT 219
++ LC+ +NGEILL+ L+ YDPK G+ +++ HGLPNW+ T ++VG+L ++T
Sbjct: 354 VRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHVGTLSWVDT 410
>ref|XP_007049219.1| F-box and associated interaction domains-containing protein,
putative [Theobroma cacao] gi|508701480|gb|EOX93376.1|
F-box and associated interaction domains-containing
protein, putative [Theobroma cacao]
Length = 418
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = +1
Query: 49 LKPLCISKNGEILLDKDGEHLILYDPKDGRVRNISIHGLPNWYETEIYVGSLVTLNT 219
++ LC+ +NGEILL+ L+ YDPK G+ R++ + G+PNW++T ++ GS +NT
Sbjct: 360 VRVLCLLENGEILLEYKNRVLVSYDPKKGKFRDLVLQGIPNWFQTVVHAGSFNWINT 416
>emb|CBI28934.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/57 (42%), Positives = 43/57 (75%)
Frame = +1
Query: 58 LCISKNGEILLDKDGEHLILYDPKDGRVRNISIHGLPNWYETEIYVGSLVTLNTKAK 228
LC+ KNGEILL+ G L+ Y+P+ G+ +++++ GLPNW++T ++VGSL +++ +
Sbjct: 207 LCLLKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGSLSWIDSNTE 263
>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
gi|147785390|emb|CAN68678.1| hypothetical protein
VITISV_041941 [Vitis vinifera]
Length = 409
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/57 (42%), Positives = 43/57 (75%)
Frame = +1
Query: 58 LCISKNGEILLDKDGEHLILYDPKDGRVRNISIHGLPNWYETEIYVGSLVTLNTKAK 228
LC+ KNGEILL+ G L+ Y+P+ G+ +++++ GLPNW++T ++VGSL +++ +
Sbjct: 352 LCLLKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGSLSWIDSNTE 408
>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
unknown protein [Arabidopsis thaliana]
gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
[Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
At3g07870 [Arabidopsis thaliana]
gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
thaliana]
Length = 417
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +1
Query: 49 LKPLCISKNGEILLDKDGEHLILYDPKDGRVRNISIHGLPNWYETEIYVGSLVTLNT 219
++ LC+ +NGEILL+ L+ YDPK G+ +++ HGLPNW+ T ++ G+L +T
Sbjct: 356 VRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDT 412
>ref|XP_006352014.1| PREDICTED: F-box protein At3g07870-like [Solanum tuberosum]
Length = 406
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Frame = +1
Query: 1 KLFTIGQ--PTYNRYLEYLKPL----CISKNGEILLDKDGEHLILYDPKDGRVRNISIHG 162
K F IG P N +++KPL C+ KNGEILL+ G +L+ YDPK+ R + G
Sbjct: 320 KEFRIGAYTPNPNCVTQHVKPLVKVLCLLKNGEILLEYKGGNLVSYDPKNCVFRTLRFQG 379
Query: 163 LPNWYETEIYVGSL 204
+PN ++T ++VG L
Sbjct: 380 MPNLFQTFVHVGCL 393
>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 389
Score = 56.2 bits (134), Expect = 4e-06
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = +1
Query: 1 KLFTIGQPTYNRYLEYLKPLCISKNG-EILLDKDGEHLILYDPKDGRVRNISIHGLPNWY 177
KLF++ + L LKPL SK+G E+L++ D +L YD K V N+ I G+P +
Sbjct: 284 KLFSVARLEVIGILRSLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVVNVWIQGVPITF 343
Query: 178 ETEIYVGSLVTLNT-----KAKGGHERIKEEEQ 261
E EI VGSLV LN + K H+ K ++
Sbjct: 344 EAEICVGSLVPLNANRLRRRPKHEHKETKNRKK 376
>ref|XP_007211962.1| hypothetical protein PRUPE_ppa006542mg [Prunus persica]
gi|462407827|gb|EMJ13161.1| hypothetical protein
PRUPE_ppa006542mg [Prunus persica]
Length = 406
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 KLFTIGQPTYNRYLEYLKPLCISKNG-EILLDKDGEHLILYDPKDGRVRNISIHGLPNWY 177
KL T+ Q R ++ ++PL SKNG E+LL++D E+L+ +D K RV+++ + GLP+ +
Sbjct: 304 KLLTLTQA---RRIKSVRPLVYSKNGHEVLLEQDHENLVWFDLKSQRVKSVKVRGLPDLF 360
Query: 178 ETEIYVGSLVTLNTKAKGGHERIKEEEQG 264
E + + SLV+++ + +R K+E G
Sbjct: 361 EAVVCMESLVSVHPSRR--DDRKKQESVG 387
>ref|XP_004252041.1| PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
Length = 344
Score = 55.1 bits (131), Expect = 1e-05
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Frame = +1
Query: 1 KLFTIGQ--PTYNRYLEYLKPL----CISKNGEILLDKDGEHLILYDPKDGRVRNISIHG 162
K F IG P N ++++PL C+ KNGEILL+ G +L+ YDPK R + G
Sbjct: 260 KEFRIGAYTPNPNCVTQHVQPLVKVLCLLKNGEILLEYKGGNLVSYDPKTCVFRTLRFQG 319
Query: 163 LPNWYETEIYVGSLVTLNTKAKG 231
+PN ++T ++VG L ++ +G
Sbjct: 320 MPNLFQTFVHVGCLNWIDIPPQG 342