BLASTX nr result
ID: Sinomenium21_contig00016060
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00016060
(385 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007220255.1| hypothetical protein PRUPE_ppa001444mg [Prun... 111 9e-23
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi... 109 5e-22
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi... 109 5e-22
ref|XP_006432351.1| hypothetical protein CICLE_v10000307mg [Citr... 102 6e-20
ref|XP_004499782.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
emb|CBI40653.3| unnamed protein product [Vitis vinifera] 100 4e-19
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19
ref|XP_002303960.2| hypothetical protein POPTR_0003s19010g [Popu... 99 5e-19
ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
ref|XP_002525566.1| pentatricopeptide repeat-containing protein,... 97 2e-18
gb|EXB44298.1| hypothetical protein L484_012217 [Morus notabilis] 97 2e-18
ref|XP_007148792.1| hypothetical protein PHAVU_005G014700g [Phas... 96 4e-18
ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Caps... 96 7e-18
ref|XP_002892635.1| pentatricopeptide repeat-containing protein ... 95 9e-18
ref|NP_172596.1| pentatricopeptide repeat-containing protein [Ar... 95 1e-17
ref|XP_006393717.1| hypothetical protein EUTSA_v10011247mg [Eutr... 94 2e-17
ref|XP_006347159.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
ref|XP_007010747.1| Pentatricopeptide repeat (PPR) superfamily p... 92 6e-17
ref|XP_004233812.1| PREDICTED: pentatricopeptide repeat-containi... 92 8e-17
ref|XP_004308197.1| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15
>ref|XP_007220255.1| hypothetical protein PRUPE_ppa001444mg [Prunus persica]
gi|462416717|gb|EMJ21454.1| hypothetical protein
PRUPE_ppa001444mg [Prunus persica]
Length = 827
Score = 111 bits (278), Expect = 9e-23
Identities = 51/82 (62%), Positives = 67/82 (81%)
Frame = +1
Query: 136 PSTSLPVLHTQNPKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLY 315
PS + P + ++ HTLSQR +IPSHVYTHP+A+LLE+C+ ++E+ +IIPL+IK+GLY
Sbjct: 25 PSRARPPISAPQFQAFHTLSQRTHIPSHVYTHPAAILLELCTSIKELNQIIPLIIKNGLY 84
Query: 316 NEHLFQTKLVSLFSNFGKLSEA 381
NEHLFQTKLVSLF N+G SEA
Sbjct: 85 NEHLFQTKLVSLFCNYGSPSEA 106
>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 109 bits (272), Expect = 5e-22
Identities = 51/86 (59%), Positives = 67/86 (77%)
Frame = +1
Query: 127 NTRPSTSLPVLHTQNPKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKS 306
N P S + +P HTLS+R +IPSHVY HP+A+LLE+C+ ++E+ +IIPLVIK+
Sbjct: 16 NQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKN 75
Query: 307 GLYNEHLFQTKLVSLFSNFGKLSEAA 384
GLYNEHLFQTKLVSLFS +G ++EAA
Sbjct: 76 GLYNEHLFQTKLVSLFSKYGSINEAA 101
>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 109 bits (272), Expect = 5e-22
Identities = 51/86 (59%), Positives = 67/86 (77%)
Frame = +1
Query: 127 NTRPSTSLPVLHTQNPKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKS 306
N P S + +P HTLS+R +IPSHVY HP+A+LLE+C+ ++E+ +IIPLVIK+
Sbjct: 16 NQTPLKSSSITIPSSPLPFHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKN 75
Query: 307 GLYNEHLFQTKLVSLFSNFGKLSEAA 384
GLYNEHLFQTKLVSLFS +G ++EAA
Sbjct: 76 GLYNEHLFQTKLVSLFSKYGSINEAA 101
>ref|XP_006432351.1| hypothetical protein CICLE_v10000307mg [Citrus clementina]
gi|568883789|ref|XP_006494628.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g11290-like isoform X1 [Citrus sinensis]
gi|568883791|ref|XP_006494629.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g11290-like isoform X2 [Citrus sinensis]
gi|568883793|ref|XP_006494630.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g11290-like isoform X3 [Citrus sinensis]
gi|568883795|ref|XP_006494631.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g11290-like isoform X4 [Citrus sinensis]
gi|557534473|gb|ESR45591.1| hypothetical protein
CICLE_v10000307mg [Citrus clementina]
Length = 812
Score = 102 bits (254), Expect = 6e-20
Identities = 50/82 (60%), Positives = 63/82 (76%)
Frame = +1
Query: 139 STSLPVLHTQNPKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYN 318
ST LH + HTLSQR YIPS +Y HPSALLLE+C+ ++E+RRI+PL+IKSGL +
Sbjct: 15 STPTQTLH----EHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCD 70
Query: 319 EHLFQTKLVSLFSNFGKLSEAA 384
+HLFQTKLVSLF + LS+AA
Sbjct: 71 QHLFQTKLVSLFCKYNSLSDAA 92
>ref|XP_004499782.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cicer arietinum]
Length = 814
Score = 102 bits (253), Expect = 7e-20
Identities = 47/92 (51%), Positives = 69/92 (75%), Gaps = 10/92 (10%)
Frame = +1
Query: 139 STSLPVLHTQNPKSSHTLS----------QRVYIPSHVYTHPSALLLEICSHVEEVRRII 288
+T L LHT P S++T+S QR++IP+HVY HPSA+LLE+C+ ++E+ +I+
Sbjct: 2 NTHLLSLHTSPPLSNNTISKTKPKTTPSYQRIFIPTHVYRHPSAILLELCTSMKELHQIL 61
Query: 289 PLVIKSGLYNEHLFQTKLVSLFSNFGKLSEAA 384
PL+IK+G YNEHLFQTKL+SLF +G ++EA+
Sbjct: 62 PLIIKNGFYNEHLFQTKLISLFCKYGSINEAS 93
>emb|CBI40653.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 99.8 bits (247), Expect = 4e-19
Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 4/87 (4%)
Frame = +1
Query: 136 PSTSLPVLHTQNPKSSHTL----SQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIK 303
P+ +LP+ P + L S R YIPSHVY HPSA+LLE+C+ ++E+ + IPL+IK
Sbjct: 49 PTNTLPLPPPPPPSPTSNLHRTPSSRTYIPSHVYKHPSAILLELCTSMKELHQFIPLIIK 108
Query: 304 SGLYNEHLFQTKLVSLFSNFGKLSEAA 384
+GLY+EHLFQTKLVSLF FG L EAA
Sbjct: 109 NGLYSEHLFQTKLVSLFCKFGSLHEAA 135
>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 99.8 bits (247), Expect = 4e-19
Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 4/87 (4%)
Frame = +1
Query: 136 PSTSLPVLHTQNPKSSHTL----SQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIK 303
P+ +LP+ P + L S R YIPSHVY HPSA+LLE+C+ ++E+ + IPL+IK
Sbjct: 43 PTNTLPLPPPPPPSPTSNLHRTPSSRTYIPSHVYKHPSAILLELCTSMKELHQFIPLIIK 102
Query: 304 SGLYNEHLFQTKLVSLFSNFGKLSEAA 384
+GLY+EHLFQTKLVSLF FG L EAA
Sbjct: 103 NGLYSEHLFQTKLVSLFCKFGSLHEAA 129
>ref|XP_002303960.2| hypothetical protein POPTR_0003s19010g [Populus trichocarpa]
gi|550343509|gb|EEE78939.2| hypothetical protein
POPTR_0003s19010g [Populus trichocarpa]
Length = 812
Score = 99.4 bits (246), Expect = 5e-19
Identities = 43/72 (59%), Positives = 60/72 (83%)
Frame = +1
Query: 169 NPKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYNEHLFQTKLVS 348
+P + HTLSQR +IPSH+Y HP+A+LLE+C+ +EV +I+P +IK+GLYNE LFQTKL+S
Sbjct: 21 SPLAQHTLSQRTHIPSHIYKHPAAILLELCTSSKEVHQILPQIIKNGLYNETLFQTKLIS 80
Query: 349 LFSNFGKLSEAA 384
LF +G L+EA+
Sbjct: 81 LFCKYGNLTEAS 92
>ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/83 (53%), Positives = 63/83 (75%)
Frame = +1
Query: 136 PSTSLPVLHTQNPKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLY 315
P+ + P L ++ L QR++IPSHVY HPSA+LLE+C+ ++E+ +I+PL+IK+G Y
Sbjct: 14 PNNTNPNLKKLKTTTTTPLYQRIFIPSHVYRHPSAILLELCTSLKELHQILPLIIKNGFY 73
Query: 316 NEHLFQTKLVSLFSNFGKLSEAA 384
NEHLFQTKL+SLF F ++EAA
Sbjct: 74 NEHLFQTKLISLFCKFNSITEAA 96
>ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535145|gb|EEF36825.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 563
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/85 (54%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = +1
Query: 136 PSTSLPVLHTQNPKSS--HTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSG 309
PS S LH++ S+ +TL +R YIP H+Y HP+A+LLE+C+ V+E+ +IIP +IK+G
Sbjct: 12 PSPSPSPLHSKTRHSTTINTLPRRTYIPGHIYKHPTAVLLELCTSVKELHQIIPSIIKNG 71
Query: 310 LYNEHLFQTKLVSLFSNFGKLSEAA 384
Y+E LFQTKL+SLF N+G L+EAA
Sbjct: 72 FYSEELFQTKLISLFCNYGSLTEAA 96
>gb|EXB44298.1| hypothetical protein L484_012217 [Morus notabilis]
Length = 814
Score = 97.1 bits (240), Expect = 2e-18
Identities = 48/83 (57%), Positives = 64/83 (77%)
Frame = +1
Query: 136 PSTSLPVLHTQNPKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLY 315
P T L L T P + HTLSQR +IPSHVY HP+A+LLE+ + ++E+R+I+PL+IK+GLY
Sbjct: 13 PPTKLR-LSTSLPGTFHTLSQRTHIPSHVYKHPAAILLELSTSLQELRQILPLIIKNGLY 71
Query: 316 NEHLFQTKLVSLFSNFGKLSEAA 384
E LFQTKLVS F +G L+E+A
Sbjct: 72 GELLFQTKLVSSFCKYGSLTESA 94
>ref|XP_007148792.1| hypothetical protein PHAVU_005G014700g [Phaseolus vulgaris]
gi|561022056|gb|ESW20786.1| hypothetical protein
PHAVU_005G014700g [Phaseolus vulgaris]
Length = 814
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 3/82 (3%)
Frame = +1
Query: 148 LPVLHTQNPKSSHT---LSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYN 318
+P + QN K T L QR++IPSHVY HPSA+LLE+C+ ++E+ +I+PLVIK+G Y+
Sbjct: 13 IPNITNQNTKKRPTSVPLYQRIFIPSHVYRHPSAVLLELCTSLKELHQILPLVIKNGFYD 72
Query: 319 EHLFQTKLVSLFSNFGKLSEAA 384
EH FQTKL+SLF F ++EAA
Sbjct: 73 EHFFQTKLISLFCKFSSITEAA 94
>ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Capsella rubella]
gi|482573205|gb|EOA37392.1| hypothetical protein
CARUB_v10011264mg [Capsella rubella]
Length = 811
Score = 95.5 bits (236), Expect = 7e-18
Identities = 47/75 (62%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Frame = +1
Query: 169 NPKSSHT---LSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYNEHLFQTK 339
+P SSH LSQR YIP++VY HP+ALLLE CS ++++R I+PLV K+GLY EHLFQTK
Sbjct: 17 SPNSSHHRHFLSQRTYIPANVYEHPAALLLERCSSLKDLRHILPLVFKNGLYQEHLFQTK 76
Query: 340 LVSLFSNFGKLSEAA 384
LVSLF +G + EAA
Sbjct: 77 LVSLFCRYGSVVEAA 91
>ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338477|gb|EFH68894.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 809
Score = 95.1 bits (235), Expect = 9e-18
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = +1
Query: 184 HTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYNEHLFQTKLVSLFSNF 363
H LSQR YIP++VY HP+ALLLE CS ++E+R I+PL+ K+GLY EHLFQTKLVSLF +
Sbjct: 23 HFLSQRNYIPANVYEHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRY 82
Query: 364 GKLSEAA 384
G + EAA
Sbjct: 83 GSVDEAA 89
>ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g11290 gi|332190592|gb|AEE28713.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/81 (54%), Positives = 61/81 (75%)
Frame = +1
Query: 142 TSLPVLHTQNPKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYNE 321
+++P + + H LS+R YIP++VY HP+ALLLE CS ++E+R+I+PLV K+GLY E
Sbjct: 9 STVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQE 68
Query: 322 HLFQTKLVSLFSNFGKLSEAA 384
H FQTKLVSLF +G + EAA
Sbjct: 69 HFFQTKLVSLFCRYGSVDEAA 89
>ref|XP_006393717.1| hypothetical protein EUTSA_v10011247mg [Eutrema salsugineum]
gi|557090295|gb|ESQ31003.1| hypothetical protein
EUTSA_v10011247mg [Eutrema salsugineum]
Length = 807
Score = 94.4 bits (233), Expect = 2e-17
Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Frame = +1
Query: 169 NPKSSHT---LSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYNEHLFQTK 339
+P SSH LSQR YIP++VY HP+ALLLE CS ++ +R ++PLV K+GLY EHLFQTK
Sbjct: 13 SPSSSHHRHFLSQRTYIPANVYEHPTALLLEKCSSLKHLRHVLPLVFKNGLYQEHLFQTK 72
Query: 340 LVSLFSNFGKLSEAA 384
LVSLF +G + EAA
Sbjct: 73 LVSLFCRYGSVVEAA 87
>ref|XP_006347159.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Solanum tuberosum]
Length = 809
Score = 92.8 bits (229), Expect = 4e-17
Identities = 39/64 (60%), Positives = 57/64 (89%)
Frame = +1
Query: 190 LSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYNEHLFQTKLVSLFSNFGK 369
LSQRV+IPSH+Y HP+A+LLE+C+ ++E+ +I+P +IK+GLY EHLF+TKLVSLF+ +G
Sbjct: 24 LSQRVHIPSHIYKHPTAILLELCNSMKELHQILPHIIKNGLYKEHLFETKLVSLFTKYGS 83
Query: 370 LSEA 381
L++A
Sbjct: 84 LNDA 87
>ref|XP_007010747.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508727660|gb|EOY19557.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 886
Score = 92.4 bits (228), Expect = 6e-17
Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +1
Query: 142 TSLPVLHTQNPKS-SHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYN 318
TS P PK SHTLSQR IP HVY HP+A+LLE+ + ++EV +I+P +IKS LY+
Sbjct: 85 TSPPPFTIPTPKPHSHTLSQRTQIPLHVYKHPTAILLELSTSIKEVYQILPHIIKSNLYS 144
Query: 319 EHLFQTKLVSLFSNFGKLSEAA 384
+HLFQTKL+SLF N G + EAA
Sbjct: 145 QHLFQTKLLSLFCNHGCIPEAA 166
>ref|XP_004233812.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Solanum lycopersicum]
Length = 811
Score = 92.0 bits (227), Expect = 8e-17
Identities = 39/65 (60%), Positives = 58/65 (89%)
Frame = +1
Query: 187 TLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYNEHLFQTKLVSLFSNFG 366
+LSQRV+IPSH+Y HP+A+LLE+C+ ++E+ +I+P +IK+GLY EHLF+TKLVSLF+ +G
Sbjct: 25 SLSQRVHIPSHIYKHPTAILLELCNSMKELHQILPHIIKNGLYKEHLFETKLVSLFTKYG 84
Query: 367 KLSEA 381
L++A
Sbjct: 85 CLNDA 89
>ref|XP_004308197.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Fragaria vesca subsp. vesca]
Length = 827
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/81 (49%), Positives = 56/81 (69%)
Frame = +1
Query: 139 STSLPVLHTQNPKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRIIPLVIKSGLYN 318
ST LP + + S T + +IPSHVYTHP+A+LLE+C+ + E+ +I PL+IK+GLY
Sbjct: 25 STKLPTPKSTSTLLSQTSERTHHIPSHVYTHPTAILLELCTSMRELHQIFPLIIKNGLYT 84
Query: 319 EHLFQTKLVSLFSNFGKLSEA 381
EH F TKL+SLF + +EA
Sbjct: 85 EHYFHTKLLSLFCKYNSPAEA 105