BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00015705
         (713 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   320   2e-85
gb|EXB63462.1| hypothetical protein L484_005425 [Morus notabilis]     283   5e-74
ref|XP_002315764.2| hypothetical protein POPTR_0010s09620g [Popu...   280   3e-73
ref|XP_006419961.1| hypothetical protein CICLE_v10004433mg [Citr...   279   6e-73
ref|XP_006489412.1| PREDICTED: pentatricopeptide repeat-containi...   278   1e-72
ref|XP_004298066.1| PREDICTED: pentatricopeptide repeat-containi...   275   1e-71
ref|XP_002517120.1| pentatricopeptide repeat-containing protein,...   272   9e-71
ref|XP_007034786.1| Pentatricopeptide repeat (PPR) superfamily p...   269   8e-70
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   266   5e-69
ref|XP_006360814.1| PREDICTED: pentatricopeptide repeat-containi...   256   5e-66
ref|XP_007157120.1| hypothetical protein PHAVU_002G044500g [Phas...   255   9e-66
ref|XP_004499920.1| PREDICTED: pentatricopeptide repeat-containi...   255   1e-65
ref|XP_004247664.1| PREDICTED: pentatricopeptide repeat-containi...   254   2e-65
ref|XP_006283207.1| hypothetical protein CARUB_v10004238mg [Caps...   243   5e-62
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi...   239   7e-61
ref|XP_002868248.1| pentatricopeptide repeat-containing protein ...   238   2e-60
ref|NP_193218.1| pentatricopeptide repeat-containing protein [Ar...   233   5e-59
ref|XP_006414634.1| hypothetical protein EUTSA_v10027503mg [Eutr...   232   1e-58
gb|EPS64911.1| hypothetical protein M569_09864 [Genlisea aurea]       205   1e-50
ref|XP_002314110.1| pentatricopeptide repeat-containing family p...   169   6e-40

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score =  320 bits (821), Expect = 2e-85
 Identities = 156/237 (65%), Positives = 197/237 (83%), Gaps = 2/237 (0%)
 Frame = +2

Query: 8   LAISSC--SSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRG 181
           L ISSC  SSS+DYALSVF+  P PE  LCN+ LRE +RS +PEK +LVYERMR ++G  
Sbjct: 61  LVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMR-TQGLA 119

Query: 182 VDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLL 361
           VDRFSFPPLLKAL+RV +L+EG+E+HG+  K+GF SDPFVQTGLVR YAA GR+ +ARL+
Sbjct: 120 VDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLM 179

Query: 362 FDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNL 541
           FDKM  RDVV WS+MI+GYCQ GL++D LLLFEEM+  +VEPD M+L+TVL+ACGR+ NL
Sbjct: 180 FDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNL 239

Query: 542 NYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           +YG+ IH++I E N  +D HLQSAL+TMYA+CGSMD+A  L+EKMT KNLVA+T+++
Sbjct: 240 SYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMV 296



 Score =  105 bits (263), Expect = 1e-20
 Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 31/232 (13%)
 Frame = +2

Query: 110 FARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGS 289
           + +S     A+L++E M+       D      +L A  R   L  G  +H  + +     
Sbjct: 198 YCQSGLFNDALLLFEEMKNYNVEP-DEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVV 256

Query: 290 DPFVQTGLVRFYAASG-------------------------------RVLDARLLFDKML 376
           DP +Q+ LV  YA+ G                               ++ +AR +F++M+
Sbjct: 257 DPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMV 316

Query: 377 QRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRA 556
           ++D+V WS MI+GY +     + L LF EMQ   ++PD + + +V+TAC     L+  + 
Sbjct: 317 KKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKW 376

Query: 557 IHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           IH ++ +  F     + +ALI MYA CGS++ A  +++KM  KN+++ T +I
Sbjct: 377 IHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMI 428



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 1/217 (0%)
 Frame = +2

Query: 35  IDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLK 214
           I+ A SVF+Q    +    + ++  +A S  P++A+ ++  M+ S G   D+ +   ++ 
Sbjct: 305 IENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQ-SLGIKPDQVTMLSVIT 363

Query: 215 ALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVA 394
           A A + AL +   +H  V K GFG    +   L+  YA  G +  AR +FDKM +++V++
Sbjct: 364 ACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVIS 423

Query: 395 WSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAI-HNYI 571
           W+ MI+ +   G     L  F +M+  ++EP+ +    VL AC  +  +  GR I ++ I
Sbjct: 424 WTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMI 483

Query: 572 CEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTL 682
            E N          ++ ++     +  A EL E M L
Sbjct: 484 NEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPL 520


>gb|EXB63462.1| hypothetical protein L484_005425 [Morus notabilis]
          Length = 728

 Score =  283 bits (723), Expect = 5e-74
 Identities = 141/238 (59%), Positives = 184/238 (77%), Gaps = 3/238 (1%)
 Frame = +2

Query: 8   LAISSC---SSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGR 178
           LA++SC     S+DYALSVF++ P PEPRL NK+LRE +R    +K +LVY RMR  EG 
Sbjct: 61  LALASCVLSPPSLDYALSVFARIPDPEPRLSNKLLREVSRRGDADKTLLVYGRMR-REGS 119

Query: 179 GVDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARL 358
            VDR+SFP +LKA  +  AL EG E+HG+  KMGF SDPFVQTGLVR YA  GR+LD RL
Sbjct: 120 SVDRYSFPAVLKAAGKTQALEEGREIHGLATKMGFDSDPFVQTGLVRMYAGCGRILDGRL 179

Query: 359 LFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRN 538
           +FDKM QRDVVAWS+MI+GY Q  L+D+V  L+EEM+ S VEPD MIL+T+L+ACGR+ N
Sbjct: 180 VFDKMSQRDVVAWSIMIDGYSQSRLFDNVFNLYEEMRNSGVEPDEMILSTILSACGRAGN 239

Query: 539 LNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           L+ G+AIH+++ E +   D  L+SAL+ MYA+CGSMD+A+EL++KM+ KNLV +T++I
Sbjct: 240 LSCGKAIHDFVVENSLLADSRLRSALVAMYASCGSMDIAQELFDKMSSKNLVVSTAMI 297



 Score =  110 bits (274), Expect = 6e-22
 Identities = 52/138 (37%), Positives = 85/138 (61%)
 Frame = +2

Query: 299 VQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSD 478
           V T ++  Y+  GR+ DARL+FD+M+++D+V+WS MI GY +     + L LF +MQ   
Sbjct: 292 VSTAMISGYSKLGRLQDARLIFDQMVEKDLVSWSAMIAGYAESDWPQEALRLFNDMQLLG 351

Query: 479 VEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAE 658
           + PD + + +V++AC     L+    +H Y     F     + +AL+ MYA CGS++ A 
Sbjct: 352 IRPDQITMLSVISACAHLGALDKANWMHIYADRNGFGGALPVSNALVDMYAKCGSLERAR 411

Query: 659 ELYEKMTLKNLVAATSLI 712
           E++EKM  KN+++ TS+I
Sbjct: 412 EVFEKMQRKNVISWTSMI 429



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
 Frame = +2

Query: 110 FARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGS 289
           +A S  P++A+ ++  M+   G   D+ +   ++ A A + AL +   +H    + GFG 
Sbjct: 331 YAESDWPQEALRLFNDMQ-LLGIRPDQITMLSVISACAHLGALDKANWMHIYADRNGFGG 389

Query: 290 DPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQ 469
              V   LV  YA  G +  AR +F+KM +++V++W+ MIN     G   + L LF  M+
Sbjct: 390 ALPVSNALVDMYAKCGSLERAREVFEKMQRKNVISWTSMINACAMHGDAVNALSLFHRMK 449

Query: 470 RSDVEPDNMILATVLTACGRSRNLNYGRAIH-NYICEENFEMDFHLQSALITMYANCGSM 646
             +VEP+++    VL AC  +  +  GR I  + I E N          ++ ++     +
Sbjct: 450 DKNVEPNSVTFVGVLYACSHTGLVEEGRNIFASMINEYNIAPKHEHYGCMVDLFGRANLL 509

Query: 647 DMAEELYEKM 676
             A E+ E M
Sbjct: 510 REALEVIETM 519


>ref|XP_002315764.2| hypothetical protein POPTR_0010s09620g [Populus trichocarpa]
           gi|550329457|gb|EEF01935.2| hypothetical protein
           POPTR_0010s09620g [Populus trichocarpa]
          Length = 721

 Score =  280 bits (716), Expect = 3e-73
 Identities = 136/230 (59%), Positives = 180/230 (78%), Gaps = 1/230 (0%)
 Frame = +2

Query: 26  SSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGR-GVDRFSFP 202
           SSS+DYALSVF+  P     L NK+ R  +RS++PE A+L YE++R  EG  G+DRFSFP
Sbjct: 61  SSSLDYALSVFTHLPKCHTPLSNKLFRSLSRSAKPETALLAYEKIRLKEGLLGIDRFSFP 120

Query: 203 PLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQR 382
           PLLKA +R   L EG E+HGV  K+GF  DPFVQTGLV  YA+  R+ +ARL+FDKM  R
Sbjct: 121 PLLKAASRASGLNEGKEIHGVATKLGFDKDPFVQTGLVGMYASCDRISEARLVFDKMSYR 180

Query: 383 DVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIH 562
           DVVAWS+MI+GY Q GLYDDVL LFEEM+ S+++PD M+L T+++ACGR+RNL+YG AIH
Sbjct: 181 DVVAWSIMIDGYHQSGLYDDVLQLFEEMRSSNLKPDEMVLTTIISACGRARNLSYGEAIH 240

Query: 563 NYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           ++I E NF +D +LQSAL+TMYA+CG M+MA++L+ K++ +NLV  T++I
Sbjct: 241 DFIIENNFVLDTYLQSALLTMYASCGCMEMAQKLFTKISSRNLVVLTAMI 290



 Score =  108 bits (271), Expect = 1e-21
 Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 31/232 (13%)
 Frame = +2

Query: 110 FARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGS 289
           + +S   +  + ++E MR S  +  D      ++ A  R   L  G  +H  + +  F  
Sbjct: 192 YHQSGLYDDVLQLFEEMRSSNLKP-DEMVLTTIISACGRARNLSYGEAIHDFIIENNFVL 250

Query: 290 DPFVQTGLVRFYAASG-------------------------------RVLDARLLFDKML 376
           D ++Q+ L+  YA+ G                               RV DARL+FD+M 
Sbjct: 251 DTYLQSALLTMYASCGCMEMAQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQME 310

Query: 377 QRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRA 556
           ++D+V WS MI+GY +     + L LF EMQ   ++PD + + +V++AC R   L+  + 
Sbjct: 311 EKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKW 370

Query: 557 IHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           IH Y+ +        + +ALI MYA CG++  A  ++EKM  +N+++ TS+I
Sbjct: 371 IHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMI 422



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 2/228 (0%)
 Frame = +2

Query: 35  IDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLK 214
           ++ A  +F Q    +    + ++  +A S +P++A+ ++  M+   G   D+ +   ++ 
Sbjct: 299 VEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVF-GIKPDQVTILSVIS 357

Query: 215 ALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVA 394
           A AR+  L     +H  V K G G    V   L+  YA  G +  AR +F+KM  R+V++
Sbjct: 358 ACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVIS 417

Query: 395 WSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYG-RAIHNYI 571
           W+ MIN +   G   + L  F +M+  +++P+ +    VL AC  +  +  G R   +  
Sbjct: 418 WTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMT 477

Query: 572 CEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTL-KNLVAATSLI 712
            E N          ++ ++     +  A EL E M L  N+V   SL+
Sbjct: 478 NEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLM 525


>ref|XP_006419961.1| hypothetical protein CICLE_v10004433mg [Citrus clementina]
           gi|557521834|gb|ESR33201.1| hypothetical protein
           CICLE_v10004433mg [Citrus clementina]
          Length = 722

 Score =  279 bits (714), Expect = 6e-73
 Identities = 135/228 (59%), Positives = 178/228 (78%)
 Frame = +2

Query: 29  SSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPL 208
           SS+ YALS+FSQ P P  R+ NK +R  + S +P+ A+ V+ +M  +EG  +DRFSFPP+
Sbjct: 65  SSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKML-NEGLTIDRFSFPPI 123

Query: 209 LKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDV 388
           LKA+AR   L+EGM+VHG+  K+GFGSDPFVQTGLV  Y A GR+LDARL+FDKM  RD+
Sbjct: 124 LKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGRILDARLMFDKMSYRDI 183

Query: 389 VAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIHNY 568
           V WSVMI+GY Q GL+DDVL LFEEM+ S+VEPD M+L+ +L+AC R+ NL+YG A+H +
Sbjct: 184 VPWSVMIDGYFQNGLFDDVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEF 243

Query: 569 ICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           I + N  +D HLQS LITMYANCG MDMA+ L++K+ LKNLV +T+++
Sbjct: 244 IIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMV 291



 Score =  117 bits (292), Expect = 5e-24
 Identities = 54/138 (39%), Positives = 91/138 (65%)
 Frame = +2

Query: 299 VQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSD 478
           V T +V  Y+ +G+V DARL+FD+M+++D++ WS MI+GY +     + L LF EMQ   
Sbjct: 286 VSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCG 345

Query: 479 VEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAE 658
           ++PD + + +V++AC     L+  + IH YI +  F  D  + +A+I MYA CGS++ A 
Sbjct: 346 MKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAR 405

Query: 659 ELYEKMTLKNLVAATSLI 712
           E++E+M  +N+++ TS+I
Sbjct: 406 EVFERMRRRNVISWTSMI 423



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 51/220 (23%), Positives = 106/220 (48%), Gaps = 1/220 (0%)
 Frame = +2

Query: 20  SCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSF 199
           S +  ++ A  +F Q    +    + ++  +A ++ P++A+ ++  M+   G   D+ + 
Sbjct: 295 SRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVC-GMKPDKVTM 353

Query: 200 PPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQ 379
             ++ A A +  L +   +H  + K  FG D  V   ++  YA  G +  AR +F++M +
Sbjct: 354 LSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRR 413

Query: 380 RDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAI 559
           R+V++W+ MIN +   G   + L+ F +M+   ++P+ +    VL AC  +  ++ GR I
Sbjct: 414 RNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREI 473

Query: 560 HNYICEE-NFEMDFHLQSALITMYANCGSMDMAEELYEKM 676
              +  E N    +     ++ ++     +  A EL E M
Sbjct: 474 FASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETM 513


>ref|XP_006489412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Citrus sinensis]
          Length = 722

 Score =  278 bits (712), Expect = 1e-72
 Identities = 135/228 (59%), Positives = 178/228 (78%)
 Frame = +2

Query: 29  SSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPL 208
           SS+ YALS+FSQ   P  R+ NK +R  +RS +P+ A+ V+ +M  +EG  +DRFSFPP+
Sbjct: 65  SSLYYALSIFSQILAPPSRVSNKFIRAISRSHRPKHALKVFLKML-NEGLTIDRFSFPPI 123

Query: 209 LKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDV 388
           LKA+AR   L+EGM+VHG+  K+GFGSDPFVQTGLV  Y A GR+LDARL+FDKM  RD+
Sbjct: 124 LKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGRILDARLMFDKMSYRDI 183

Query: 389 VAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIHNY 568
           V WSVMI+GY Q GL+DDVL LFEEM+ S+VEPD M+L+ +L+AC R+ NL+YG A+H +
Sbjct: 184 VPWSVMIDGYFQNGLFDDVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEF 243

Query: 569 ICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           I + N  +D HLQS LITMYANCG MDMA+ L++K+ LKNLV +T+++
Sbjct: 244 IIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMV 291



 Score =  117 bits (292), Expect = 5e-24
 Identities = 54/138 (39%), Positives = 91/138 (65%)
 Frame = +2

Query: 299 VQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSD 478
           V T +V  Y+ +G+V DARL+FD+M+++D++ WS MI+GY +     + L LF EMQ   
Sbjct: 286 VSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCG 345

Query: 479 VEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAE 658
           ++PD + + +V++AC     L+  + IH YI +  F  D  + +A+I MYA CGS++ A 
Sbjct: 346 MKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAR 405

Query: 659 ELYEKMTLKNLVAATSLI 712
           E++E+M  +N+++ TS+I
Sbjct: 406 EVFERMRRRNVISWTSMI 423



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 51/220 (23%), Positives = 106/220 (48%), Gaps = 1/220 (0%)
 Frame = +2

Query: 20  SCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSF 199
           S +  ++ A  +F Q    +    + ++  +A ++ P++A+ ++  M+   G   D+ + 
Sbjct: 295 SRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVC-GMKPDKVTM 353

Query: 200 PPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQ 379
             ++ A A +  L +   +H  + K  FG D  V   ++  YA  G +  AR +F++M +
Sbjct: 354 LSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRR 413

Query: 380 RDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAI 559
           R+V++W+ MIN +   G   + L+ F +M+   ++P+ +    VL AC  +  ++ GR I
Sbjct: 414 RNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREI 473

Query: 560 HNYICEE-NFEMDFHLQSALITMYANCGSMDMAEELYEKM 676
              +  E N    +     ++ ++     +  A EL E M
Sbjct: 474 FASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETM 513


>ref|XP_004298066.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Fragaria vesca subsp. vesca]
          Length = 736

 Score =  275 bits (702), Expect = 1e-71
 Identities = 132/229 (57%), Positives = 177/229 (77%)
 Frame = +2

Query: 26  SSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPP 205
           S S+ Y LS+F Q P P+  LCNK+LRE +R  +PEKA+LVYE MR  EG  +DRFSFPP
Sbjct: 78  SPSLHYPLSLFHQIPKPQTHLCNKLLRELSRCREPEKALLVYETMR-REGVALDRFSFPP 136

Query: 206 LLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRD 385
           LLKA++R   L EG+E+HG+  K+G+ SDPFVQT LVR YAA GRV+DAR +FDKM  RD
Sbjct: 137 LLKAVSRAVVLAEGLEIHGLACKLGYDSDPFVQTVLVRMYAACGRVMDARQVFDKMPSRD 196

Query: 386 VVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIHN 565
           VVAWS+MI+GYCQ G YD    LFEEM+ +DV+PD MIL+ +L+ACGR+  L+YG+AIH+
Sbjct: 197 VVAWSIMIDGYCQSGHYDIAFHLFEEMKNTDVKPDQMILSAMLSACGRAGKLSYGKAIHD 256

Query: 566 YICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           +I + N  +D H+ SALI +YA  GSMD+A++L++K +++N V AT+++
Sbjct: 257 FIEDNNIVVDSHILSALIAVYAGSGSMDLAQKLFDKTSVRNFVVATAMV 305



 Score =  113 bits (282), Expect = 7e-23
 Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 31/263 (11%)
 Frame = +2

Query: 17  SSCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFS 196
           ++C   +D A  VF + P  +    + ++  + +S   + A  ++E M+ ++ +  D+  
Sbjct: 177 AACGRVMD-ARQVFDKMPSRDVVAWSIMIDGYCQSGHYDIAFHLFEEMKNTDVKP-DQMI 234

Query: 197 FPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASG------------- 337
              +L A  R   L  G  +H  +       D  + + L+  YA SG             
Sbjct: 235 LSAMLSACGRAGKLSYGKAIHDFIEDNNIVVDSHILSALIAVYAGSGSMDLAQKLFDKTS 294

Query: 338 ------------------RVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEE 463
                             RV DAR +FD+++Q+D+V WS MI+GY +     + L LF E
Sbjct: 295 VRNFVVATAMVSGYSKVGRVEDARKIFDQIVQKDLVCWSAMISGYAESDQPREALRLFSE 354

Query: 464 MQRSDVEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGS 643
           M+ S + PD + + +V++AC     L+  + +H+Y+    F     + +ALI MYA CGS
Sbjct: 355 MEVSGLRPDPVTMLSVISACSHLGALDQAKWVHSYVDTNGFSGALSINNALIDMYAKCGS 414

Query: 644 MDMAEELYEKMTLKNLVAATSLI 712
           ++ A +++EKM  +N+++ T++I
Sbjct: 415 LERARQVFEKMPRRNVISWTTMI 437



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 2/228 (0%)
 Frame = +2

Query: 35  IDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLK 214
           ++ A  +F Q    +    + ++  +A S QP +A+ ++  M  S G   D  +   ++ 
Sbjct: 314 VEDARKIFDQIVQKDLVCWSAMISGYAESDQPREALRLFSEMEVS-GLRPDPVTMLSVIS 372

Query: 215 ALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVA 394
           A + + AL +   VH  V   GF     +   L+  YA  G +  AR +F+KM +R+V++
Sbjct: 373 ACSHLGALDQAKWVHSYVDTNGFSGALSINNALIDMYAKCGSLERARQVFEKMPRRNVIS 432

Query: 395 WSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIH-NYI 571
           W+ MI+ +   G   + L  F +M+ ++VEP+ +    VL AC  +  +  GR I  + +
Sbjct: 433 WTTMISAFAMHGDASNALSFFSQMKLANVEPNAVTFVGVLYACSHAGFVEEGRQIFASMV 492

Query: 572 CEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTL-KNLVAATSLI 712
            E N          ++ +Y     +  A E+ E M L  N+V   SL+
Sbjct: 493 NEYNITPKLKHYGCMVDLYGRANLLREALEVIETMPLAPNVVIWGSLM 540


>ref|XP_002517120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543755|gb|EEF45283.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 477

 Score =  272 bits (695), Expect = 9e-71
 Identities = 127/232 (54%), Positives = 177/232 (76%)
 Frame = +2

Query: 17  SSCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFS 196
           SS  SS++YALSVF+  P P P L NK+LR  +RSS+PE  +LVY+++R     G+D+FS
Sbjct: 67  SSSISSLNYALSVFTHIPTPHPTLSNKLLRALSRSSKPETVLLVYQKIREDGLFGLDKFS 126

Query: 197 FPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKML 376
           FP +LKA A++ AL +GME+HGV+ K+ F  DPF+QTGL+  Y   G++L+ARL+FDKM 
Sbjct: 127 FPFILKAAAKIAALNDGMEIHGVLAKLDFYKDPFLQTGLMGMYVGCGKILEARLVFDKMS 186

Query: 377 QRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRA 556
            RDVV WS MINGY QGG +DD L LFEEM+ S+VEPD M+L+T+++AC R++NL YG+ 
Sbjct: 187 YRDVVTWSTMINGYYQGGHFDDALQLFEEMRSSNVEPDKMVLSTIISACARAKNLGYGKE 246

Query: 557 IHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           +H+ I E NF +D HL+S LI++YA CG MDMA+EL+  M+ +NLV +T+++
Sbjct: 247 VHDLIIENNFALDPHLESGLISLYAGCGCMDMAKELFTNMSSRNLVVSTTMV 298



 Score =  122 bits (306), Expect = 1e-25
 Identities = 68/225 (30%), Positives = 117/225 (52%), Gaps = 31/225 (13%)
 Frame = +2

Query: 131 EKAVLVYERMRGSEGRGVDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTG 310
           + A+ ++E MR S     D+     ++ A AR   L  G EVH ++ +  F  DP +++G
Sbjct: 207 DDALQLFEEMRSSNVEP-DKMVLSTIISACARAKNLGYGKEVHDLIIENNFALDPHLESG 265

Query: 311 LVRFYAASG-------------------------------RVLDARLLFDKMLQRDVVAW 397
           L+  YA  G                               R+ DARL+F++M ++D++ W
Sbjct: 266 LISLYAGCGCMDMAKELFTNMSSRNLVVSTTMVSGYLKVGRIEDARLIFNQMDEKDLICW 325

Query: 398 SVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIHNYICE 577
           S+MI+GY +     + L LF EMQ   +EPD + + +V++AC     L+  + IH ++ +
Sbjct: 326 SIMISGYAESDQPQEALHLFNEMQFLGIEPDEVTMLSVISACAHLGVLDQAKRIHMFVDK 385

Query: 578 ENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
             F     + +ALI MYA CG ++ A  ++EKM ++N+++ TS+I
Sbjct: 386 NGFGKALSVNNALIDMYAKCGCLEAARAVFEKMQIRNVISWTSMI 430



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 44/152 (28%), Positives = 78/152 (51%)
 Frame = +2

Query: 35  IDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLK 214
           I+ A  +F+Q    +    + ++  +A S QP++A+ ++  M+   G   D  +   ++ 
Sbjct: 307 IEDARLIFNQMDEKDLICWSIMISGYAESDQPQEALHLFNEMQFL-GIEPDEVTMLSVIS 365

Query: 215 ALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVA 394
           A A +  L +   +H  V K GFG    V   L+  YA  G +  AR +F+KM  R+V++
Sbjct: 366 ACAHLGVLDQAKRIHMFVDKNGFGKALSVNNALIDMYAKCGCLEAARAVFEKMQIRNVIS 425

Query: 395 WSVMINGYCQGGLYDDVLLLFEEMQRSDVEPD 490
           W+ MIN +   G  +  L  F +M+  +VEP+
Sbjct: 426 WTSMINAFAIHGDANSALNYFHQMKEENVEPN 457


>ref|XP_007034786.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508713815|gb|EOY05712.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 722

 Score =  269 bits (687), Expect = 8e-70
 Identities = 131/229 (57%), Positives = 177/229 (77%)
 Frame = +2

Query: 26  SSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPP 205
           S S+ Y+LS+FS  P P P L  + +R  +RSS+PE A+ VY+R+R +EG  +DRF+FPP
Sbjct: 64  SPSLPYSLSIFSHLPHPLPSLSTRFVRHLSRSSRPEFALFVYQRLR-NEGIKIDRFTFPP 122

Query: 206 LLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRD 385
           LLKA+ARV  L EG E+HG   K+G  SDPFVQTGLV  Y A GRVL+AR +FDKM  RD
Sbjct: 123 LLKAVARVEGLAEGKEIHGFGFKLGLDSDPFVQTGLVGMYLACGRVLEARSVFDKMSYRD 182

Query: 386 VVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIHN 565
           +VAWS+MI+GYC  GL+DD L LFEEM+R+++E D  IL+++L+ACGR  NLN+G+AIH+
Sbjct: 183 IVAWSIMIDGYCLSGLFDDALELFEEMKRANIEVDKFILSSILSACGRVGNLNHGKAIHD 242

Query: 566 YICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           YI E+   +D HLQSAL+TMYA+CG M+MA++L+ +M  KNLV +T+++
Sbjct: 243 YIIEKILVVDSHLQSALMTMYASCGCMEMAQKLFNQMAPKNLVVSTAMV 291



 Score =  110 bits (275), Expect = 5e-22
 Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 31/225 (13%)
 Frame = +2

Query: 131 EKAVLVYERMRGSEGRGVDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTG 310
           + A+ ++E M+ +    VD+F    +L A  RV  L  G  +H  + +     D  +Q+ 
Sbjct: 200 DDALELFEEMKRANIE-VDKFILSSILSACGRVGNLNHGKAIHDYIIEKILVVDSHLQSA 258

Query: 311 LVRFYAASG-------------------------------RVLDARLLFDKMLQRDVVAW 397
           L+  YA+ G                               R+ DARL+FD+M+++D+V W
Sbjct: 259 LMTMYASCGCMEMAQKLFNQMAPKNLVVSTAMVSGYSRHRRIEDARLIFDQMVEKDLVCW 318

Query: 398 SVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIHNYICE 577
           S MI+GY +     + L LF E+Q   + PD + + +V++AC     L   + IH Y  +
Sbjct: 319 SAMISGYAESDQPQEALRLFNELQSLGMRPDQVTMLSVISACAHLGVLEKAKWIHVYADK 378

Query: 578 ENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
             F     + +ALI M+A CGS++ A  ++EKMT +N+++ TS+I
Sbjct: 379 NGFGGALPINNALIDMHAKCGSLERARGVFEKMTRRNVISWTSMI 423



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 62/245 (25%), Positives = 117/245 (47%), Gaps = 9/245 (3%)
 Frame = +2

Query: 5    NLAISSCSSS-------IDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMR 163
            NL +S+   S       I+ A  +F Q    +    + ++  +A S QP++A+ ++  ++
Sbjct: 283  NLVVSTAMVSGYSRHRRIEDARLIFDQMVEKDLVCWSAMISGYAESDQPQEALRLFNELQ 342

Query: 164  GSEGRGVDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRV 343
             S G   D+ +   ++ A A +  L +   +H    K GFG    +   L+  +A  G +
Sbjct: 343  -SLGMRPDQVTMLSVISACAHLGVLEKAKWIHVYADKNGFGGALPINNALIDMHAKCGSL 401

Query: 344  LDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTAC 523
              AR +F+KM +R+V++W+ MIN +   G  ++ L  F +M+ + VEP+ +    VL AC
Sbjct: 402  ERARGVFEKMTRRNVISWTSMINAFAIHGDANNALSFFHKMKEAHVEPNGVTFVGVLYAC 461

Query: 524  GRSRNLNYGRAIH-NYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTL-KNLVA 697
              +  ++ G+ I  + I E            ++ ++     +  A E+ E M L  N+V 
Sbjct: 462  SHAGLVDEGQRIFASMINEHKIAPKHEHYGCMVDLFGRANLLREALEIVETMPLAPNVVI 521

Query: 698  ATSLI 712
              SL+
Sbjct: 522  WGSLM 526


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512069|gb|AES93692.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  266 bits (680), Expect = 5e-69
 Identities = 121/233 (51%), Positives = 174/233 (74%)
 Frame = +2

Query: 14  ISSCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRF 193
           +SS SSS+ YALSVFSQ P P     N++LR  +RSS PEK + +Y  +R      +DRF
Sbjct: 63  LSSSSSSLHYALSVFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRF 122

Query: 194 SFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKM 373
           SFP LLKA+++V A   G+E+HG+  K+GF  DPF+QTGL+  YA+  R++DARLLFDKM
Sbjct: 123 SFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKM 182

Query: 374 LQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGR 553
              D VAW+++I+GYCQ G YDD L LFE+M+ SD++PD++IL TVL+ACG + NL+YGR
Sbjct: 183 CHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGR 242

Query: 554 AIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
            IH ++ +  + +D HLQ+ALI MYANCG+MD+A ++Y+ ++ K+L+ +T+++
Sbjct: 243 TIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAML 295



 Score =  113 bits (283), Expect = 6e-23
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 31/263 (11%)
 Frame = +2

Query: 17  SSCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFS 196
           +SC   +D  L +F +   P+    N I+  + ++   + A+ ++E MR S+ +  D   
Sbjct: 167 ASCRRIMDARL-LFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKP-DSVI 224

Query: 197 FPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGR------------ 340
              +L A      L  G  +H  V   G+  D  +QT L+  YA  G             
Sbjct: 225 LCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLS 284

Query: 341 -------------------VLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEE 463
                              V DAR +FD+M++RD+V WS MI+GY +     + L LF+E
Sbjct: 285 SKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDE 344

Query: 464 MQRSDVEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGS 643
           M +    PD + + +V++AC     L     IH Y+    F     + +ALI MYA CG+
Sbjct: 345 MLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGN 404

Query: 644 MDMAEELYEKMTLKNLVAATSLI 712
           +  A E++E M  KN+++ +S+I
Sbjct: 405 LVKAREVFENMPRKNVISWSSMI 427



 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 2/191 (1%)
 Frame = +2

Query: 110 FARSSQPEKAVLVYERMRGSEGRGV-DRFSFPPLLKALARVCALIEGMEVHGVV*KMGFG 286
           +A S QP++A+ +++ M   + R V D+ +   ++ A + V AL +   +H  V + GFG
Sbjct: 329 YAESDQPQEALKLFDEML--QKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFG 386

Query: 287 SDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEM 466
               V   L+  YA  G ++ AR +F+ M +++V++WS MIN +   G  D  + LF  M
Sbjct: 387 RALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRM 446

Query: 467 QRSDVEPDNMILATVLTACGRSRNLNYG-RAIHNYICEENFEMDFHLQSALITMYANCGS 643
           +  ++EP+ +    VL ACG +  +  G +   + I E            ++ +Y     
Sbjct: 447 KEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANF 506

Query: 644 MDMAEELYEKM 676
           +  A EL E M
Sbjct: 507 LRKAIELIETM 517


>ref|XP_006360814.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Solanum tuberosum]
          Length = 723

 Score =  256 bits (654), Expect = 5e-66
 Identities = 128/238 (53%), Positives = 170/238 (71%), Gaps = 2/238 (0%)
 Frame = +2

Query: 5   NLAISSCS--SSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGR 178
           NL +SS    SS+ Y+LS+FS    P   L NK+ RE +RS +P  A+L  E  R + G 
Sbjct: 59  NLILSSIPLPSSLHYSLSIFSTLQNPRTHLINKLFRELSRSKEPHNALLFLENGRRN-GL 117

Query: 179 GVDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARL 358
            VDRFSFPPLLKA +R  AL EGME+HG+  K+GF SDPF+QT L+  YA  G + DARL
Sbjct: 118 EVDRFSFPPLLKAASRAFALCEGMEIHGLGCKLGFDSDPFIQTALLGMYANCGHIQDARL 177

Query: 359 LFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRN 538
           +FDKM +RD+VAW +MI+GYCQ GL+DDVL+L EEM+ S+VEPD+ +  T+L+ACG++ N
Sbjct: 178 VFDKMSERDIVAWDIMIDGYCQNGLFDDVLVLLEEMRSSNVEPDSRVFTTILSACGQTGN 237

Query: 539 LNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           L  G+ IH  I E N   D  LQS+LI+MY+ CG MD A+ LY+K++ KNLV +T++I
Sbjct: 238 LAIGKVIHELISENNIIADSRLQSSLISMYSGCGCMDFAQNLYDKLSQKNLVVSTAMI 295



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 48/138 (34%), Positives = 83/138 (60%)
 Frame = +2

Query: 299 VQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSD 478
           V T ++  Y+ +G++  AR +FD++  +D+V WS MI+GY +     + L L +EMQ S 
Sbjct: 290 VSTAMISGYSKAGQIEAARSIFDQITNKDLVCWSAMISGYAESDQPQEGLKLLDEMQASG 349

Query: 479 VEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAE 658
           V+PD + + +V++AC     L+  + IH  + +  F     + +ALI MYA CG +D A 
Sbjct: 350 VKPDQVTMLSVISACANLGALDQAKRIHLIVDKYRFREALPVNNALIDMYAKCGYLDGAR 409

Query: 659 ELYEKMTLKNLVAATSLI 712
            ++ +M  KN+++ TS+I
Sbjct: 410 GVFGRMRRKNVISWTSMI 427



 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
 Frame = +2

Query: 20  SCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSF 199
           S +  I+ A S+F Q    +    + ++  +A S QP++ + + + M+ S G   D+ + 
Sbjct: 299 SKAGQIEAARSIFDQITNKDLVCWSAMISGYAESDQPQEGLKLLDEMQAS-GVKPDQVTM 357

Query: 200 PPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQ 379
             ++ A A + AL +   +H +V K  F     V   L+  YA  G +  AR +F +M +
Sbjct: 358 LSVISACANLGALDQAKRIHLIVDKYRFREALPVNNALIDMYAKCGYLDGARGVFGRMRR 417

Query: 380 RDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAI 559
           ++V++W+ MI+ Y   G  D  L+LF +M+    EP+ +    VL AC  +  ++ G+ I
Sbjct: 418 KNVISWTSMISAYAIHGEADQALMLFRQMK----EPNWITFVAVLYACSHAGLVDEGQHI 473

Query: 560 HNYICEE-NFEMDFHLQSALITMYANCGSMDMAEELYEKMTL-KNLVAATSLI 712
            + +  E N          ++ +Y     +  A EL E M +  N+V   SL+
Sbjct: 474 FSSMMNEYNITPKLEHYGCMVDLYGRANRLREALELVETMPMAPNVVIWGSLM 526


>ref|XP_007157120.1| hypothetical protein PHAVU_002G044500g [Phaseolus vulgaris]
           gi|561030535|gb|ESW29114.1| hypothetical protein
           PHAVU_002G044500g [Phaseolus vulgaris]
          Length = 713

 Score =  255 bits (652), Expect = 9e-66
 Identities = 120/232 (51%), Positives = 173/232 (74%)
 Frame = +2

Query: 17  SSCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFS 196
           SS  S++ YALS+F+  P P+ R  N++ R F+R   PE  + +Y  +R + G  +DRFS
Sbjct: 51  SSSPSALHYALSLFTHIPNPDTRFSNQLFRHFSRGPSPESTLRLYRLLRRN-GTLLDRFS 109

Query: 197 FPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKML 376
           FPPLLKA++++ AL  G+EVHG+  K+GF  DPF++T L+  YAA GR++DARL+FDKM 
Sbjct: 110 FPPLLKAVSKLSALNMGLEVHGLASKLGFHDDPFIETALIAMYAACGRIMDARLVFDKMS 169

Query: 377 QRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRA 556
            RDVV W++MI+GY Q G YD VL L+EEM+ S +EPD++IL TVL+ACG + NL+YG+A
Sbjct: 170 HRDVVTWNIMIDGYSQSGHYDHVLRLYEEMKGSGMEPDSIILCTVLSACGHAGNLSYGKA 229

Query: 557 IHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           IH +I +  F +D HLQ+AL+ MYANCG+M +A E+Y+K+  K+LV +T+++
Sbjct: 230 IHEFIKDNGFRVDSHLQTALVNMYANCGAMYLAREVYDKLPSKHLVVSTAML 281



 Score =  115 bits (289), Expect = 1e-23
 Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 31/263 (11%)
 Frame = +2

Query: 17  SSCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFS 196
           ++C   +D  L VF +    +    N ++  +++S   +  + +YE M+GS G   D   
Sbjct: 153 AACGRIMDARL-VFDKMSHRDVVTWNIMIDGYSQSGHYDHVLRLYEEMKGS-GMEPDSII 210

Query: 197 FPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGR------------ 340
              +L A      L  G  +H  +   GF  D  +QT LV  YA  G             
Sbjct: 211 LCTVLSACGHAGNLSYGKAIHEFIKDNGFRVDSHLQTALVNMYANCGAMYLAREVYDKLP 270

Query: 341 -------------------VLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEE 463
                              V DAR +FD+++ +D+V WS MI+GY +     + L LF E
Sbjct: 271 SKHLVVSTAMLSGYAKIGLVEDARFIFDQIVDKDLVCWSAMISGYAESDQPQEALRLFNE 330

Query: 464 MQRSDVEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGS 643
           MQR  + PD + + +V++AC     L   R IH+Y  +  F     + +ALI MYA CG+
Sbjct: 331 MQRQRIVPDQITMLSVISACAHVGALVKARWIHSYADKNGFGRALPINNALIDMYAKCGN 390

Query: 644 MDMAEELYEKMTLKNLVAATSLI 712
           +  A E++E M  KN+++ +S+I
Sbjct: 391 LARAREVFENMPRKNVISWSSMI 413



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
 Frame = +2

Query: 35  IDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLK 214
           ++ A  +F Q    +    + ++  +A S QP++A+ ++  M+  +    D+ +   ++ 
Sbjct: 290 VEDARFIFDQIVDKDLVCWSAMISGYAESDQPQEALRLFNEMQ-RQRIVPDQITMLSVIS 348

Query: 215 ALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVA 394
           A A V AL++   +H    K GFG    +   L+  YA  G +  AR +F+ M +++V++
Sbjct: 349 ACAHVGALVKARWIHSYADKNGFGRALPINNALIDMYAKCGNLARAREVFENMPRKNVIS 408

Query: 395 WSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYG-RAIHNYI 571
           WS MIN +   G  D  + LF  M+  ++EP+ +    +L AC  +  ++ G +   + I
Sbjct: 409 WSSMINAFAIHGDADSAIALFHRMKVQNIEPNGVTFIGLLYACSHAGLVDEGQKFFSSMI 468

Query: 572 CEENFEMDFHLQSALITMYANCGSMDMAEELYEKM 676
            E +          ++ +Y     +  A EL E M
Sbjct: 469 NEHDISPQREHYGCMVDLYCRAKLLRKALELIETM 503


>ref|XP_004499920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Cicer arietinum]
          Length = 714

 Score =  255 bits (651), Expect = 1e-65
 Identities = 119/235 (50%), Positives = 170/235 (72%)
 Frame = +2

Query: 8   LAISSCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVD 187
           L+ SS SS++ YALSVFSQ P  +    N++LR  +RS  P   + +Y  +R +    +D
Sbjct: 49  LSSSSSSSTLHYALSVFSQFPNTDTHFSNQLLRHLSRSPTPHNTLFLYHNLRTTNAFTLD 108

Query: 188 RFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFD 367
            FSFPPLLKA++++ A   G+E+HG+  K+GF SDPF+QT L+  YA+  R++DARLLFD
Sbjct: 109 SFSFPPLLKAVSKLSAFNHGLEIHGLASKLGFLSDPFIQTALIAMYASCRRIMDARLLFD 168

Query: 368 KMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNY 547
           KM  RD VAW+ +I+GYCQ G YDD L LFE+M+ SD++PD++IL TVL+ACG   NL+Y
Sbjct: 169 KMSHRDAVAWNTIIDGYCQNGHYDDALRLFEDMKTSDMKPDSVILCTVLSACGHVGNLSY 228

Query: 548 GRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           GR IH ++ +    ++ HLQSALI MYANCG+M++A ELY+ +  K+L+ +T++I
Sbjct: 229 GRTIHEFVKDNGIALNSHLQSALINMYANCGAMELARELYDGLLSKHLIVSTAMI 283



 Score =  107 bits (268), Expect = 3e-21
 Identities = 52/138 (37%), Positives = 82/138 (59%)
 Frame = +2

Query: 299 VQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSD 478
           V T ++  YA  G V DAR +FD+M+++D+V WS MI+GY +     + L LF EM R  
Sbjct: 278 VSTAMISGYAKLGMVKDARFIFDQMIEKDLVCWSAMISGYAESEQPHEALKLFNEMLRHR 337

Query: 479 VEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAE 658
           + PD + + +V++AC     L   + IH Y  E  F     + +ALI MYA CG++  A 
Sbjct: 338 IVPDQITMLSVISACSHVGTLVNAKWIHTYADENGFGRALSVNNALIDMYAKCGNLGKAR 397

Query: 659 ELYEKMTLKNLVAATSLI 712
           +++E M  KN+++ +S+I
Sbjct: 398 KVFENMPRKNVISWSSMI 415



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
 Frame = +2

Query: 110 FARSSQPEKAVLVYERMRGSEGRGV-DRFSFPPLLKALARVCALIEGMEVHGVV*KMGFG 286
           +A S QP +A+ ++  M     R V D+ +   ++ A + V  L+    +H    + GFG
Sbjct: 317 YAESEQPHEALKLFNEML--RHRIVPDQITMLSVISACSHVGTLVNAKWIHTYADENGFG 374

Query: 287 SDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEM 466
               V   L+  YA  G +  AR +F+ M +++V++WS MIN +   G  +  + LF +M
Sbjct: 375 RALSVNNALIDMYAKCGNLGKARKVFENMPRKNVISWSSMINAFAMHGDANSAIHLFHKM 434

Query: 467 QRSDVEPDNMILATVLTACGRSRNLNYGRAI-HNYICEENFEMDFHLQSALITMYANCGS 643
           +  + EP+ +    VL ACG +  +  G+ +  + I E            ++ +Y     
Sbjct: 435 KEENTEPNGITFIGVLYACGHAGLVEEGQKLFSSMINEHGISPTREHYGCMVDLYCRANL 494

Query: 644 MDMAEELYEKM 676
           +  A EL E M
Sbjct: 495 LRKAIELIETM 505


>ref|XP_004247664.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Solanum lycopersicum]
          Length = 722

 Score =  254 bits (649), Expect = 2e-65
 Identities = 124/228 (54%), Positives = 167/228 (73%)
 Frame = +2

Query: 29  SSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPL 208
           SS+ Y+LS+FS    P   L NK+ RE +RS +P  A+L  E  R + G  VDRFSFPPL
Sbjct: 69  SSLQYSLSIFSTLQNPRTHLINKLFRELSRSKEPHNALLFLENGRRN-GLEVDRFSFPPL 127

Query: 209 LKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDV 388
           LKA +R  AL EGME+HG+  K+GF SDPF+QT L+  YA SG++ DARL+FDKM +RD+
Sbjct: 128 LKAASRAFALREGMEIHGLGCKLGFISDPFIQTALLGMYANSGQIQDARLVFDKMSERDI 187

Query: 389 VAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIHNY 568
           V W +MI+GYCQ GL+DDVL+L EEM+ S+VEPD+ +  T+L+ACG++ NL  G+ IH  
Sbjct: 188 VTWDIMIDGYCQNGLFDDVLVLLEEMRSSNVEPDSRVFTTILSACGQTGNLALGKVIHEL 247

Query: 569 ICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           I E N   D  LQS+LI+MYA CG MD+A+ LY++++ KNLV +T++I
Sbjct: 248 ISENNIIADSRLQSSLISMYAGCGCMDLAQNLYDELSQKNLVVSTAMI 295



 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 47/137 (34%), Positives = 82/137 (59%)
 Frame = +2

Query: 299 VQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSD 478
           V T ++  Y+ +G+V  A  +F+++  +D+V WS MI+GY +     + L L +EMQ S 
Sbjct: 290 VSTAMISGYSKAGQVEAAHSIFNQITDKDLVCWSAMISGYAESDQPQEGLKLLDEMQASG 349

Query: 479 VEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAE 658
           V+PD + + +V++AC     L+  + IH  + +  F     + +ALI MYA CG +D A 
Sbjct: 350 VKPDQVTMLSVISACANLGALDQAKRIHMIVDKYRFREALPVNNALIDMYAKCGYLDGAR 409

Query: 659 ELYEKMTLKNLVAATSL 709
           E++ +M  KN+++ TS+
Sbjct: 410 EVFGRMRRKNVISWTSM 426



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 58/233 (24%), Positives = 112/233 (48%), Gaps = 2/233 (0%)
 Frame = +2

Query: 20  SCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSF 199
           S +  ++ A S+F+Q    +    + ++  +A S QP++ + + + M+ S G   D+ + 
Sbjct: 299 SKAGQVEAAHSIFNQITDKDLVCWSAMISGYAESDQPQEGLKLLDEMQAS-GVKPDQVTM 357

Query: 200 PPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQ 379
             ++ A A + AL +   +H +V K  F     V   L+  YA  G +  AR +F +M +
Sbjct: 358 LSVISACANLGALDQAKRIHMIVDKYRFREALPVNNALIDMYAKCGYLDGAREVFGRMRR 417

Query: 380 RDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAI 559
           ++V++W+ M + +   G  D  L+LF +M+    EP+ +    VL AC  +  ++ G+ I
Sbjct: 418 KNVISWTSMTSAHAIHGEADQALMLFRQMK----EPNWITFVAVLYACSHAGLVDEGQQI 473

Query: 560 HNYICEE-NFEMDFHLQSALITMYANCGSMDMAEELYEKMTL-KNLVAATSLI 712
            + +  E            ++ +Y     +  A EL E M +  N+V   SL+
Sbjct: 474 FSSMVNEYKITPKLEHYGCMVDLYGRANRLREALELVESMPMAPNVVIWGSLM 526


>ref|XP_006283207.1| hypothetical protein CARUB_v10004238mg [Capsella rubella]
           gi|482551912|gb|EOA16105.1| hypothetical protein
           CARUB_v10004238mg [Capsella rubella]
          Length = 724

 Score =  243 bits (620), Expect = 5e-62
 Identities = 121/237 (51%), Positives = 170/237 (71%), Gaps = 1/237 (0%)
 Frame = +2

Query: 5   NLAISSCSSSIDYALSVFSQTPCP-EPRLCNKILREFARSSQPEKAVLVYERMRGSEGRG 181
           +L  SS S S+ YALS+FS  P P E  + N  LR+ +RS++P   +L Y+R+R + GR 
Sbjct: 53  DLCFSSSSISLSYALSLFSSIPTPPESVVFNPFLRDLSRSNEPRATILFYQRIRHAGGR- 111

Query: 182 VDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLL 361
           +D+FSFPP+LKA  +V A  EGME+HGV  KM   SDPFVQTGL+  YA+ GR+  AR +
Sbjct: 112 LDQFSFPPILKAACKVSAFFEGMEIHGVAFKMATLSDPFVQTGLMDMYASCGRIECARNV 171

Query: 362 FDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNL 541
           FD+M QRDVV W+ MI+ YC+ GL D+   LFEEM+ S+V PD MIL  +++ACGR+ N+
Sbjct: 172 FDEMSQRDVVTWNTMIDRYCRCGLLDEAFKLFEEMKFSNVMPDEMILCNIVSACGRTGNM 231

Query: 542 NYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           +Y RAI++++ E +  MD HL +AL+TMYA  G MDMA E +EKM+++NL  +T+++
Sbjct: 232 SYNRAIYDFLIENDVSMDTHLLTALVTMYAGSGCMDMAREFFEKMSVRNLFVSTAMV 288



 Score =  100 bits (248), Expect = 6e-19
 Identities = 46/139 (33%), Positives = 85/139 (61%)
 Frame = +2

Query: 296 FVQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRS 475
           FV T +V  Y+ +GR+ +AR++FD+  ++D+V W+ MI+ Y +     + L +F+EM+ S
Sbjct: 282 FVSTAMVSGYSKAGRLNEARVIFDQTEKKDLVCWTTMISAYAENDHPQEALRVFDEMRYS 341

Query: 476 DVEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMA 655
            ++PD + + +V++AC     L   + +H+Y      E    + +ALI MYA CG ++ A
Sbjct: 342 GIKPDLITMFSVISACANLGTLGNAKWVHHYTHISGLESVLPINNALINMYAKCGGLNEA 401

Query: 656 EELYEKMTLKNLVAATSLI 712
             ++E M  +N+V+ +S+I
Sbjct: 402 RNVFENMPTRNVVSWSSMI 420



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 2/233 (0%)
 Frame = +2

Query: 20  SCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSF 199
           S +  ++ A  +F QT   +      ++  +A +  P++A+ V++ MR S G   D  + 
Sbjct: 292 SKAGRLNEARVIFDQTEKKDLVCWTTMISAYAENDHPQEALRVFDEMRYS-GIKPDLITM 350

Query: 200 PPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQ 379
             ++ A A +  L     VH      G  S   +   L+  YA  G + +AR +F+ M  
Sbjct: 351 FSVISACANLGTLGNAKWVHHYTHISGLESVLPINNALINMYAKCGGLNEARNVFENMPT 410

Query: 380 RDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAI 559
           R+VV+WS MIN Y   G   D L+ F  M++ +  P+ +    VL  C  S  +  G+ I
Sbjct: 411 RNVVSWSSMINAYSMHGEASDALISFARMKQENAVPNAITFVGVLYGCSHSGLVEEGKKI 470

Query: 560 HNYICEE-NFEMDFHLQSALITMYANCGSMDMAEELYEKMTL-KNLVAATSLI 712
              + +E N          ++ ++     +  A E+ E M +  N+V   SL+
Sbjct: 471 FASMTDEYNITPTLEHYGCMVDLFCRANRLQEALEIIESMPMAPNVVIWGSLM 523


>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  239 bits (610), Expect = 7e-61
 Identities = 114/233 (48%), Positives = 168/233 (72%), Gaps = 1/233 (0%)
 Frame = +2

Query: 17  SSCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFS 196
           S   S++DYALS+FS  P P  R  N++LR+F+R   PE  + +Y  +R + G  +DRFS
Sbjct: 59  SPSPSALDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRN-GFPLDRFS 117

Query: 197 FPPLLKALARVCALIEGMEVHGVV*KMGF-GSDPFVQTGLVRFYAASGRVLDARLLFDKM 373
           FPPLLKA++++ AL  G+E+HG+  K GF  +DPF+Q+ L+  YAA GR++DAR LFDKM
Sbjct: 118 FPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKM 177

Query: 374 LQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGR 553
             RDVV W++MI+GY Q   YD VL L+EEM+ S  EPD +IL TVL+AC  + NL+YG+
Sbjct: 178 SHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGK 237

Query: 554 AIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           AIH +I +  F +  H+Q++L+ MYANCG+M +A E+Y+++  K++V +T+++
Sbjct: 238 AIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAML 290



 Score =  110 bits (274), Expect = 6e-22
 Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 31/238 (13%)
 Frame = +2

Query: 92  NKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLKALARVCALIEGMEVHGVV* 271
           N ++  +++++  +  + +YE M+ S G   D      +L A A    L  G  +H  + 
Sbjct: 186 NIMIDGYSQNAHYDHVLKLYEEMKTS-GTEPDAIILCTVLSACAHAGNLSYGKAIHQFIK 244

Query: 272 KMGFGSDPFVQTGLVRFYAASGR-------------------------------VLDARL 358
             GF     +QT LV  YA  G                                V DAR 
Sbjct: 245 DNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARF 304

Query: 359 LFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRN 538
           +FD+M+++D+V WS MI+GY +     + L LF EMQR  + PD + + +V++AC     
Sbjct: 305 IFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGA 364

Query: 539 LNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           L   + IH Y  +  F     + +ALI MYA CG++  A E++E M  KN+++ +S+I
Sbjct: 365 LVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMI 422



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 2/191 (1%)
 Frame = +2

Query: 110 FARSSQPEKAVLVYERMRGSEGRGV-DRFSFPPLLKALARVCALIEGMEVHGVV*KMGFG 286
           +A S QP +A+ ++  M+    R V D+ +   ++ A A V AL++   +H    K GFG
Sbjct: 324 YAESYQPLEALQLFNEMQ--RRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFG 381

Query: 287 SDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEM 466
               +   L+  YA  G ++ AR +F+ M +++V++WS MIN +   G  D  + LF  M
Sbjct: 382 RTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRM 441

Query: 467 QRSDVEPDNMILATVLTACGRSRNLNYG-RAIHNYICEENFEMDFHLQSALITMYANCGS 643
           +  ++EP+ +    VL AC  +  +  G +   + I E            ++ +Y     
Sbjct: 442 KEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANH 501

Query: 644 MDMAEELYEKM 676
           +  A EL E M
Sbjct: 502 LRKAMELIETM 512


>ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314084|gb|EFH44507.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 725

 Score =  238 bits (606), Expect = 2e-60
 Identities = 118/237 (49%), Positives = 168/237 (70%), Gaps = 1/237 (0%)
 Frame = +2

Query: 5   NLAISSCSSSIDYALSVFSQ-TPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRG 181
           NL+ SS S ++ YAL++FS  +P PE  + N +LR+ +RS +P   +L Y+R+R   GR 
Sbjct: 53  NLSFSSSSINLSYALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGR- 111

Query: 182 VDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLL 361
            DR SFPP+LKA+++V AL EGME+HG   K+   SDPFV+TGL+  YAA GR+  AR +
Sbjct: 112 FDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNV 171

Query: 362 FDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNL 541
           FD+M QRDVV W+ MI  YC+ GL D+   LFEEM+ S+V PD MIL  +++ACGR+ N+
Sbjct: 172 FDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 231

Query: 542 NYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
            Y RAI++++ E +  MD HL +AL+TMYA  G MDMA E + KM+++NL  +T+++
Sbjct: 232 RYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMV 288



 Score =  104 bits (259), Expect = 3e-20
 Identities = 50/139 (35%), Positives = 85/139 (61%)
 Frame = +2

Query: 296 FVQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRS 475
           FV T +V  Y+ +GR+ DAR++FD+   +D+V W+ MI+ Y +     + L +FEEM  S
Sbjct: 282 FVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCS 341

Query: 476 DVEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMA 655
            ++PD + + +V++AC     L+  + +H Y      E    + +ALI MYA CG +D A
Sbjct: 342 GIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAA 401

Query: 656 EELYEKMTLKNLVAATSLI 712
            +++EKM  +N+V+ +S+I
Sbjct: 402 RDVFEKMPTRNVVSWSSMI 420



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 2/233 (0%)
 Frame = +2

Query: 20  SCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSF 199
           S +  +D A  +F QT   +      ++  +A S  P++A+ V+E M  S G   D  + 
Sbjct: 292 SKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCS-GIKPDVVTM 350

Query: 200 PPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQ 379
             ++ A   +  L +   VH      G  S   +   L+  YA  G +  AR +F+KM  
Sbjct: 351 LSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPT 410

Query: 380 RDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAI 559
           R+VV+WS MIN +   G   D L LF +M++ +VEP+ +    VL  C  S  +  G+ I
Sbjct: 411 RNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 470

Query: 560 HNYICEE-NFEMDFHLQSALITMYANCGSMDMAEELYEKMTL-KNLVAATSLI 712
              + +E N          ++ ++     +  A E+ E M +  N+V   SL+
Sbjct: 471 FASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLM 523


>ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274931|sp|O23337.1|PP311_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14820 gi|2244839|emb|CAB10261.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|7268228|emb|CAB78524.1| hypothetical protein
           [Arabidopsis thaliana] gi|332658106|gb|AEE83506.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 722

 Score =  233 bits (594), Expect = 5e-59
 Identities = 116/237 (48%), Positives = 166/237 (70%), Gaps = 1/237 (0%)
 Frame = +2

Query: 5   NLAISSCSSSIDYALSVFSQTPCP-EPRLCNKILREFARSSQPEKAVLVYERMRGSEGRG 181
           NL++SS S ++ YAL+VFS  P P E  + N  LR+ +RSS+P   +L Y+R+R   GR 
Sbjct: 50  NLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGR- 108

Query: 182 VDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLL 361
           +D+FSF P+LKA+++V AL EGME+HGV  K+    DPFV+TG +  YA+ GR+  AR +
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV 168

Query: 362 FDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNL 541
           FD+M  RDVV W+ MI  YC+ GL D+   LFEEM+ S+V PD MIL  +++ACGR+ N+
Sbjct: 169 FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228

Query: 542 NYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
            Y RAI+ ++ E +  MD HL +AL+TMYA  G MDMA E + KM+++NL  +T+++
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMV 285



 Score =  101 bits (252), Expect = 2e-19
 Identities = 48/139 (34%), Positives = 86/139 (61%)
 Frame = +2

Query: 296 FVQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRS 475
           FV T +V  Y+  GR+ DA+++FD+  ++D+V W+ MI+ Y +     + L +FEEM  S
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS 338

Query: 476 DVEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMA 655
            ++PD + + +V++AC     L+  + +H+ I     E +  + +ALI MYA CG +D  
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398

Query: 656 EELYEKMTLKNLVAATSLI 712
            +++EKM  +N+V+ +S+I
Sbjct: 399 RDVFEKMPRRNVVSWSSMI 417



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 2/228 (0%)
 Frame = +2

Query: 35  IDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLK 214
           +D A  +F QT   +      ++  +  S  P++A+ V+E M  S G   D  S   ++ 
Sbjct: 294 LDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS-GIKPDVVSMFSVIS 352

Query: 215 ALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVA 394
           A A +  L +   VH  +   G  S+  +   L+  YA  G +   R +F+KM +R+VV+
Sbjct: 353 ACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS 412

Query: 395 WSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIHNYIC 574
           WS MIN     G   D L LF  M++ +VEP+ +    VL  C  S  +  G+ I   + 
Sbjct: 413 WSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMT 472

Query: 575 EE-NFEMDFHLQSALITMYANCGSMDMAEELYEKMTL-KNLVAATSLI 712
           +E N          ++ ++     +  A E+ E M +  N+V   SL+
Sbjct: 473 DEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLM 520


>ref|XP_006414634.1| hypothetical protein EUTSA_v10027503mg [Eutrema salsugineum]
           gi|557115804|gb|ESQ56087.1| hypothetical protein
           EUTSA_v10027503mg [Eutrema salsugineum]
          Length = 724

 Score =  232 bits (591), Expect = 1e-58
 Identities = 118/233 (50%), Positives = 162/233 (69%), Gaps = 1/233 (0%)
 Frame = +2

Query: 17  SSCSSSIDYALSVFSQTPCP-EPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRF 193
           SS S S  YALS+FS  P P E  + N +LR  +RS +    +L Y+R+R + GR +D+F
Sbjct: 57  SSSSISFSYALSLFSSIPSPPESIVFNPLLRNLSRSGEFRATILFYQRIRHAGGR-LDQF 115

Query: 194 SFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKM 373
           SFPP+LKA ++V AL+EG+E+HGV  KM   SDPFVQTGL+  Y + GR+++AR +FD+M
Sbjct: 116 SFPPILKAASKVSALLEGLELHGVALKMATLSDPFVQTGLMDMYGSCGRIVEARNMFDEM 175

Query: 374 LQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGR 553
            QRDVV W+ MI  YC+ GL D+   LFEEMQ S+V PD MIL  +++ACGR  N +Y R
Sbjct: 176 SQRDVVTWNTMIERYCRCGLVDEAFKLFEEMQSSNVIPDEMILCNIVSACGRVGNTSYNR 235

Query: 554 AIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           AI+ ++ E +  MD HL +AL+ MYA  G MDMA E Y KM ++NL  +T+++
Sbjct: 236 AIYGFLKENDVRMDNHLLTALVNMYAGVGCMDMAMEFYMKMPVRNLFVSTAMV 288



 Score =  108 bits (270), Expect = 2e-21
 Identities = 51/139 (36%), Positives = 88/139 (63%)
 Frame = +2

Query: 296 FVQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRS 475
           FV T +V  ++ +GR+ +AR +FD+M ++D+V W+ MI+ Y +    ++ L +FEEM+ S
Sbjct: 282 FVSTAMVSGFSKAGRLDEARDVFDQMRKKDLVCWTTMISTYAESDHPEEALRIFEEMRLS 341

Query: 476 DVEPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMA 655
            V+PD + + +V++AC     L   + +H Y     FE    + +ALI MYA CG +D A
Sbjct: 342 GVKPDEITMCSVISACANLGALEKAKWVHEYTHVNGFESSLTVNNALINMYAKCGRLDAA 401

Query: 656 EELYEKMTLKNLVAATSLI 712
            +++EKM  K++V+ +S+I
Sbjct: 402 RDVFEKMPTKDVVSWSSMI 420



 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 2/233 (0%)
 Frame = +2

Query: 20  SCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSF 199
           S +  +D A  VF Q    +      ++  +A S  PE+A+ ++E MR S G   D  + 
Sbjct: 292 SKAGRLDEARDVFDQMRKKDLVCWTTMISTYAESDHPEEALRIFEEMRLS-GVKPDEITM 350

Query: 200 PPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQ 379
             ++ A A + AL +   VH      GF S   V   L+  YA  GR+  AR +F+KM  
Sbjct: 351 CSVISACANLGALEKAKWVHEYTHVNGFESSLTVNNALINMYAKCGRLDAARDVFEKMPT 410

Query: 380 RDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAI 559
           +DVV+WS MIN +   G  DD L  F  M++  VEP+ +    VL  C  S  +  G+ I
Sbjct: 411 KDVVSWSSMINAFSMHGEADDALTSFARMKQETVEPNAVTFVGVLYGCSHSGLVEEGKKI 470

Query: 560 HNYICEE-NFEMDFHLQSALITMYANCGSMDMAEELYEKMTL-KNLVAATSLI 712
              + +E N          ++ ++     +  A E+ E M +  N+V   SL+
Sbjct: 471 FASMTDEYNITPKLEHYGCMVDLFGRANRLREALEVIESMPMAPNVVIWGSLM 523


>gb|EPS64911.1| hypothetical protein M569_09864 [Genlisea aurea]
          Length = 728

 Score =  205 bits (522), Expect = 1e-50
 Identities = 108/238 (45%), Positives = 152/238 (63%), Gaps = 3/238 (1%)
 Frame = +2

Query: 8   LAISSCSSSIDYALSVFSQTP---CPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGR 178
           L +SS S    YALS+ S  P    P   L NKI+   +RSS    A+L ++ M   +  
Sbjct: 62  LLLSSLSFP-SYALSLISYLPHHYSPTFHLTNKIINHLSRSSDNRNAILFFQAMLRKDFP 120

Query: 179 GVDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARL 358
            +DRFSFPP++K  ++  AL EG   H +  K+G+ SDPFV+T L+  Y A G + DAR 
Sbjct: 121 -IDRFSFPPMIKTASKARALDEGRMFHALAAKLGYDSDPFVETALMGMYGACGLISDARF 179

Query: 359 LFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRN 538
           LFD M  +D+VAW++MI+GYCQ  L+DD L L EEM +S VEPD  I  T+L+ C R + 
Sbjct: 180 LFDAMSHKDIVAWNIMIDGYCQSQLFDDALALLEEM-KSGVEPDERIFTTILSGCARFKK 238

Query: 539 LNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           L+ G+++H  I      +D  LQ+AL+ MYAN G+MD+A+ LY+KM +KN+VA+T +I
Sbjct: 239 LDIGKSVHELISRSGTVLDSQLQTALVNMYANSGAMDLAQTLYDKMKIKNVVASTVMI 296



 Score =  103 bits (257), Expect = 6e-20
 Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 31/238 (13%)
 Frame = +2

Query: 92  NKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLKALARVCALIEGMEVHGVV* 271
           N ++  + +S   + A+ + E M+   G   D   F  +L   AR   L  G  VH ++ 
Sbjct: 193 NIMIDGYCQSQLFDDALALLEEMKS--GVEPDERIFTTILSGCARFKKLDIGKSVHELIS 250

Query: 272 KMGFGSDPFVQTGLVRFYAASGR-------------------------------VLDARL 358
           + G   D  +QT LV  YA SG                                +  ARL
Sbjct: 251 RSGTVLDSQLQTALVNMYANSGAMDLAQTLYDKMKIKNVVASTVMITGHSRHGDIGAARL 310

Query: 359 LFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRN 538
           +FD+M+ +D+V WS MI+ Y +     + L +F++MQ++ ++PD + + +V++AC     
Sbjct: 311 VFDEMVDKDLVCWSAMISCYAESDHPQEALKIFDQMQQNGIKPDQVTMLSVISACAHLGA 370

Query: 539 LNYGRAIHNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
           L+  + IH  +  + F     + +ALI MYA CGS+  A E++ +M  KN+++ +S+I
Sbjct: 371 LHRAKQIHETVVRKEFGRALPINNALIDMYAKCGSLHDASEVFIRMHHKNVISWSSMI 428



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 2/203 (0%)
 Frame = +2

Query: 110 FARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLKALARVCALIEGMEVHGVV*KMGFGS 289
           +A S  P++A+ ++++M+   G   D+ +   ++ A A + AL    ++H  V +  FG 
Sbjct: 330 YAESDHPQEALKIFDQMQ-QNGIKPDQVTMLSVISACAHLGALHRAKQIHETVVRKEFGR 388

Query: 290 DPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVAWSVMINGYCQGGLYDDVLLLFEEMQ 469
              +   L+  YA  G + DA  +F +M  ++V++WS MIN +   G   + L  F  M+
Sbjct: 389 ALPINNALIDMYAKCGSLHDASEVFIRMHHKNVISWSSMINAFAVHGDAANALKHFTLMK 448

Query: 470 RSDVEPDNMILATVLTACGRSRNLNYG-RAIHNYICEENFEMDFHLQSALITMYANCGSM 646
             +VEP+ +    VL AC  +  +  G +A  + + E            L+ +Y     +
Sbjct: 449 LENVEPNWITFVGVLYACSHAGLVVEGQKAFESMVEEYRITPKLEHYGCLVDLYGRANHI 508

Query: 647 DMAEELYEKMTL-KNLVAATSLI 712
             A ++ E M +  N+V   SL+
Sbjct: 509 RKALQIVETMPMAPNVVIWGSLM 531


>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222850518|gb|EEE88065.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 738

 Score =  169 bits (429), Expect = 6e-40
 Identities = 83/231 (35%), Positives = 143/231 (61%)
 Frame = +2

Query: 20  SCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSF 199
           S  SS+DYA  VF Q P P     N ++R FA S +P + +LV+ +M     R  + ++F
Sbjct: 75  SSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTF 134

Query: 200 PPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQ 379
           P ++KA   V +L+ G  +HG+V K  FGSD F+   L+ FY++ G +  A L+F K+++
Sbjct: 135 PFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVE 194

Query: 380 RDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAI 559
           +D+V+W+ MI+G+ QGG  ++ L LF+ M+  +  P+ + +  VL+AC +  +L +GR  
Sbjct: 195 KDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWA 254

Query: 560 HNYICEENFEMDFHLQSALITMYANCGSMDMAEELYEKMTLKNLVAATSLI 712
            +YI     +++  L +A++ MY  CGS++ A  L++KM  K++V+ T++I
Sbjct: 255 CDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMI 305



 Score =  104 bits (259), Expect = 3e-20
 Identities = 67/263 (25%), Positives = 127/263 (48%), Gaps = 32/263 (12%)
 Frame = +2

Query: 20  SCSSSIDYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSF 199
           S    +D A  VFS+    +    N ++  F +   PE+A+ +++RM+    R  +R + 
Sbjct: 177 SSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARP-NRVTM 235

Query: 200 PPLLKALARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQ 379
             +L A A+   L  G      + + G   +  +   ++  Y   G + DAR LFDKM +
Sbjct: 236 VGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEE 295

Query: 380 RDVVAWSVMINGYCQGGLYDDVLLLFEEMQRSDV-------------------------- 481
           +D+V+W+ MI+GY + G YD    +F+ M R D+                          
Sbjct: 296 KDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFREL 355

Query: 482 ------EPDNMILATVLTACGRSRNLNYGRAIHNYICEENFEMDFHLQSALITMYANCGS 643
                 +P+ + LA+ L AC +   ++ G  IH YI ++  +++FH+ ++LI MY+ CG 
Sbjct: 356 QLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGH 415

Query: 644 MDMAEELYEKMTLKNLVAATSLI 712
           ++ A E++  +  +++   +++I
Sbjct: 416 LEKALEVFYSVERRDVFVWSAMI 438



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
 Frame = +2

Query: 38  DYALSVFSQTPCPEPRLCNKILREFARSSQPEKAVLVYERMRGSEGRGVDRFSFPPLLKA 217
           D A  VF   P  +    N ++  + ++ +P++A+ ++  ++ ++    +  +    L A
Sbjct: 315 DAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAA 374

Query: 218 LARVCALIEGMEVHGVV*KMGFGSDPFVQTGLVRFYAASGRVLDARLLFDKMLQRDVVAW 397
            A++ A+  G  +H  + K G   +  + T L+  Y+  G +  A  +F  + +RDV  W
Sbjct: 375 CAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVW 434

Query: 398 SVMINGYCQGGLYDDVLLLFEEMQRSDVEPDNMILATVLTACGRSRNLNYGRAIHNYICE 577
           S MI G    G     + LF +MQ + V+P+ +    +L AC  S  ++ GR   N +  
Sbjct: 435 SAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRP 494

Query: 578 ENFEMDFHLQSA-LITMYANCGSMDMAEELYEKMTL 682
               +      A ++ +    G ++ A EL EKM +
Sbjct: 495 VYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPI 530