BLASTX nr result
ID: Sinomenium21_contig00015599
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00015599
(1888 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 411 e-112
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 411 e-112
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 347 1e-92
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 345 4e-92
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 345 5e-92
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 342 3e-91
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 334 9e-89
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 331 8e-88
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 327 9e-87
emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera] 309 2e-81
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 286 2e-74
gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis th... 279 4e-72
ref|NP_181532.2| nuclear RNA polymerase D1B [Arabidopsis thalian... 279 4e-72
gb|AAB95289.1| unknown protein [Arabidopsis thaliana] 279 4e-72
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi... 278 6e-72
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps... 276 3e-71
ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutr... 265 4e-68
ref|XP_007219786.1| hypothetical protein PRUPE_ppa024567mg [Prun... 262 3e-67
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 242 4e-61
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 239 2e-60
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 411 bits (1057), Expect = e-112
Identities = 260/670 (38%), Positives = 348/670 (51%), Gaps = 65/670 (9%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
SSIVASCSWGKHV VGTG+ F +LW+TKEI QDG D+++FLHLVR S G+E DTAC
Sbjct: 1270 SSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLHLVRSGSYGKEPDTAC 1329
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
LG E++D+ L++ +LE +SPE + ++ +P F+D + ++
Sbjct: 1330 LGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSAEF-------------------QNT 1370
Query: 1526 WETNSFESGGSREWNGDQGWNSKNATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPSS 1347
WE + SGG +W +Q +K TA T K AW W +D+V + S S S
Sbjct: 1371 WENHVPGSGG--DWAVNQ---NKETTASTLKPSAWSSWGTDKVTMKDTFSTREPDESSRS 1425
Query: 1346 GGWN-----------NVESRKELSDD---------------------WNKRVEEAKATNT 1263
GW+ N R+ D W K+++EA T
Sbjct: 1426 AGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWGKKIDEADKTGW 1485
Query: 1262 IKDDGKTQWGQWKTSPDSDVKLLDEQLCQSKSGQMGAWSA-WGTNKFPTQASHTEKSLES 1086
K+DGK Q + + S D D K+ E+ QS G + + + W N+ + ++S +
Sbjct: 1486 NKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGDWKKNELQMEVVQHDESPVN 1545
Query: 1085 PRFGGWNDFESHKKHTDAWDKRAEETKATGWSNKEGKTEWGQKRSYNSDTNKMGEQMNQH 906
N E D A+ T + GW + GK +W KR S + EQ
Sbjct: 1546 EHSWDANLPE---------DPLAQATTSVGWDSSTGK-DW-TKRKLQSPS----EQQRDP 1590
Query: 905 KSSMWSSSSVADETPSXXXXXXXXXXXXXKESLVTNIMEEQGSQ--SEKNWDSFGGKNWS 732
WSSS N+M+EQ +Q S WDS G K W+
Sbjct: 1591 AIKSWSSSH--------------------------NVMKEQSNQPASTHGWDSPGAKGWN 1624
Query: 731 ENEVQGQWGTHKDSAVESQEWDKEGSSVKSHAWGTNVRLEQ------------------- 609
+ E Q QW + SAV++ + S SH WG + Q
Sbjct: 1625 DVEEQSQWN-QRGSAVKNDQ------SESSHGWGPSNEQNQLPSSQGWGSPNAGAGHESE 1677
Query: 608 ---------GKK--PTASHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGIFTATRQ 462
GKK P S GW ++N+E WK KK+ K G L+D +++A GIFTATRQ
Sbjct: 1678 TQSQWGQPSGKKSRPEGSRGWGSNNTE-WKNKKNRPNKPQGPLND--DYSAGGIFTATRQ 1734
Query: 461 RLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDKALK 282
R+D FTSEEQDIL DVEPIM SIRRIMHQ+ DGDPL+ DDQSY+LD V N HPDKA+K
Sbjct: 1735 RVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVK 1794
Query: 281 IGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYF 102
+G+G+DY+ V++HSS+ ESRCFY+VSTDG EDFSYRK LENF+K+KYP+NA +FI KYF
Sbjct: 1795 MGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYF 1854
Query: 101 RKGRTEGGHE 72
R+ R G E
Sbjct: 1855 RRPRAGGNRE 1864
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 411 bits (1057), Expect = e-112
Identities = 260/670 (38%), Positives = 348/670 (51%), Gaps = 65/670 (9%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
SSIVASCSWGKHV VGTG+ F +LW+TKEI QDG D+++FLHLVR S G+E DTAC
Sbjct: 1210 SSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLHLVRSGSYGKEPDTAC 1269
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
LG E++D+ L++ +LE +SPE + ++ +P F+D + ++
Sbjct: 1270 LGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSAEF-------------------QNT 1310
Query: 1526 WETNSFESGGSREWNGDQGWNSKNATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPSS 1347
WE + SGG +W +Q +K TA T K AW W +D+V + S S S
Sbjct: 1311 WENHVPGSGG--DWAVNQ---NKETTASTLKPSAWSSWGTDKVTMKDTFSTREPDESSRS 1365
Query: 1346 GGWN-----------NVESRKELSDD---------------------WNKRVEEAKATNT 1263
GW+ N R+ D W K+++EA T
Sbjct: 1366 AGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWGKKIDEADKTGW 1425
Query: 1262 IKDDGKTQWGQWKTSPDSDVKLLDEQLCQSKSGQMGAWSA-WGTNKFPTQASHTEKSLES 1086
K+DGK Q + + S D D K+ E+ QS G + + + W N+ + ++S +
Sbjct: 1426 NKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGDWKKNELQMEVVQHDESPVN 1485
Query: 1085 PRFGGWNDFESHKKHTDAWDKRAEETKATGWSNKEGKTEWGQKRSYNSDTNKMGEQMNQH 906
N E D A+ T + GW + GK +W KR S + EQ
Sbjct: 1486 EHSWDANLPE---------DPLAQATTSVGWDSSTGK-DW-TKRKLQSPS----EQQRDP 1530
Query: 905 KSSMWSSSSVADETPSXXXXXXXXXXXXXKESLVTNIMEEQGSQ--SEKNWDSFGGKNWS 732
WSSS N+M+EQ +Q S WDS G K W+
Sbjct: 1531 AIKSWSSSH--------------------------NVMKEQSNQPASTHGWDSPGAKGWN 1564
Query: 731 ENEVQGQWGTHKDSAVESQEWDKEGSSVKSHAWGTNVRLEQ------------------- 609
+ E Q QW + SAV++ + S SH WG + Q
Sbjct: 1565 DVEEQSQWN-QRGSAVKNDQ------SESSHGWGPSNEQNQLPSSQGWGSPNAGAGHESE 1617
Query: 608 ---------GKK--PTASHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGIFTATRQ 462
GKK P S GW ++N+E WK KK+ K G L+D +++A GIFTATRQ
Sbjct: 1618 TQSQWGQPSGKKSRPEGSRGWGSNNTE-WKNKKNRPNKPQGPLND--DYSAGGIFTATRQ 1674
Query: 461 RLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDKALK 282
R+D FTSEEQDIL DVEPIM SIRRIMHQ+ DGDPL+ DDQSY+LD V N HPDKA+K
Sbjct: 1675 RVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVK 1734
Query: 281 IGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYF 102
+G+G+DY+ V++HSS+ ESRCFY+VSTDG EDFSYRK LENF+K+KYP+NA +FI KYF
Sbjct: 1735 MGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYF 1794
Query: 101 RKGRTEGGHE 72
R+ R G E
Sbjct: 1795 RRPRAGGNRE 1804
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 347 bits (889), Expect = 1e-92
Identities = 242/742 (32%), Positives = 355/742 (47%), Gaps = 143/742 (19%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
SSIVASCSWGKHVAVGTG+ F ILW+ KE+ KQD V DV+NFLH+VR S E +AC
Sbjct: 1265 SSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFLHMVR-SGKSEEPTSAC 1323
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEI------------------- 1584
LG EI+DI +++ E +LSPE +P F+D + +
Sbjct: 1324 LGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAV 1383
Query: 1583 -----QCNKEQNGTLYNENSNKSNWE------------TNSFESGGSREWNGDQGWNSKN 1455
Q +NG N +S+ ++W TN+ E+ + W+ W +K
Sbjct: 1384 STGGGQWESNENGKATN-SSDGNDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGNK- 1441
Query: 1454 ATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPSSGGWNNVES---------------- 1323
AT + D W S+ V+ + SME + P SGGW++ +
Sbjct: 1442 ATNSSNDND-WSNCSTKEVERDSFTSMEKT---PKSGGWDSASTWGTKTKDDSFKRETAP 1497
Query: 1322 ------------RKELSDDWNKRVEEAKATNTIKDDGKTQWGQWKTSPDSDVKLLDE--- 1188
+ E D ++K+ E A + +D ++ G KT + ++ D+
Sbjct: 1498 KKSSQWSGLQKDKAETQDAFHKKAEMASKSGGWEDKAWSR-GTSKTEDNWSSQVKDKAES 1556
Query: 1187 -----QLCQSKSGQMGAWSAWGTNKFPTQASHTEKSLESPRFGGWNDFES---HKKHTDA 1032
Q SK+ G+ W N S GWND ++ +K +D
Sbjct: 1557 FQVQVQEVSSKTNGWGSTGGWTKNSGGDHQSEA----------GWNDGQASMDREKVSDR 1606
Query: 1031 WDKRAEE-----------------------TKATGWSNKEGKTEWGQKRSYNSDTNKMGE 921
WD++A + +KA S+ W +++S + +
Sbjct: 1607 WDRKATQKLESHQTSSWGSPTVGDSKDSFPSKAVDHSDSVVNHSWDRQKSPEASQGFGND 1666
Query: 920 QMNQHKSSMWSSSSVADETPSXXXXXXXXXXXXXKESLVTNIMEEQGSQSEKNWDSF--- 750
Q KS S+A+ + + + EQ S + WDS
Sbjct: 1667 AWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSDHGFDQVTNEQKSSDTRGWDSQEKT 1726
Query: 749 -----------GGKNW-SENEVQGQWG----THKDSAVESQE-----------------W 669
++W S+N+ G WG ++ + ESQ+ W
Sbjct: 1727 DKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSSTQFSQLKPPETSLGW 1786
Query: 668 DKEGSSVKSHAWGTNVRLEQGKKPTASHGWDTSN--SEGW-------KLKKSYRGKSPGK 516
+++ S SH WG+N ++ + T+SHGWD N S+GW K +K+ KSPG
Sbjct: 1787 EQQKSPEVSHGWGSN---KESSEQTSSHGWDKKNQGSKGWGGNAGEWKNRKNRPPKSPGM 1843
Query: 515 LDDRNNWNASGIFTATRQRLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDD 336
+D N A ++TA+ QRLD FTSEEQDIL+D+EPIM SIR++MHQS DGDPL+ +D
Sbjct: 1844 SNDDANLRA--LYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAED 1901
Query: 335 QSYVLDNVLNYHPDKALKIGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLEN 156
QS+VL +V N+HPDKA K+G+G+D+ V++HSS+QESRCFY+V+TDG EDFSYRK L+N
Sbjct: 1902 QSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDN 1961
Query: 155 FLKDKYPENAMSFISKYFRKGR 90
F+K KYP+ A F++KYFRK R
Sbjct: 1962 FIKGKYPDLAEMFVAKYFRKPR 1983
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 345 bits (885), Expect = 4e-92
Identities = 247/669 (36%), Positives = 340/669 (50%), Gaps = 64/669 (9%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
SS+VA+CSWGKHVAVGTG+ F +LW T+ E QD DV++FLH+VR S+ E DT C
Sbjct: 1209 SSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLHMVRSSTGIEELDTGC 1268
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
LG E+D +E + + SLSPE N +P F+D V+ NK++N +E + +
Sbjct: 1269 LGEEVDGLE---DEFDWSLSPEHNLCSDKPIFEDLVEDQSWLENKQENENWDSEADCRKS 1325
Query: 1526 WETNSFESGGSREWNGDQGWNSKNATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSP-- 1353
E + G S E GW ++ A W S D+++ + S +PSG
Sbjct: 1326 SEDKWEKLGTSLE-KPSSGWRTEGA---------WGKSSDDKLEKAGSPSRKPSGWGTEA 1375
Query: 1352 -----SSGGWNNVES--RKELSD-----DWNKRVEEAKATNTIKDDGKTQ--WGQ---WK 1224
SS W NV S K S+ W K + K N KT WG W
Sbjct: 1376 SWGESSSDKWENVGSPAAKSFSEWGTEASWGKSFGD-KPENVRSPAAKTSSGWGSEASWG 1434
Query: 1223 TSPDSDVKLLDEQLCQSKSGQMGAWSAWG------------TNKFPTQASHTEKS----- 1095
SP + + + SG GA ++WG T P+ A TE S
Sbjct: 1435 KSPGDRQENVGRSASKPLSG-WGAKASWGKSSEDKLEEVETTVAKPSSAWGTEASWDKSS 1493
Query: 1094 ----------LESPRFGGWNDFESHKKHTD--AWDKRAEETKATGWSNKEGKTEWGQKRS 951
E+P G + + K +D W A T + G + E + W K S
Sbjct: 1494 EVTLEKVAAPAENPLSGWGTEAQDSGKSSDWSEWKDHANATASWGRNGSEENSGWDTKAS 1553
Query: 950 YNSDTNKMGEQMNQHKSSMWSSSSV--ADETPSXXXXXXXXXXXXXKESLVTNIMEEQGS 777
+N+ K ++++ S++ +SSSV A E S ++S+V I
Sbjct: 1554 WNT---KALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVP 1610
Query: 776 QSEKNWDSFGGKNWSENEVQG----QWGTHKDSAVESQE------WDKE----GSSVKSH 639
++ DS GK +G WG K + ES + WD GS +
Sbjct: 1611 DAKGTDDSSWGKQKLTENAKGTDDSSWGKQKHTENESSQPASSNAWDLPDATGGSETEMQ 1670
Query: 638 AWGTNVRLEQGKKPTASHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGIFTATRQR 459
WG + R E KK + GW +S+ E WK KK+ +SPG ++D + NA ++T TRQR
Sbjct: 1671 VWGQS-RKEPFKK---NRGWASSSGE-WKGKKNRPPRSPGVVNDDSTVNA--MYTVTRQR 1723
Query: 458 LDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDKALKI 279
LD FTSEEQDILSDVEPIM SIRRIMHQS DGD L+ DD+S++ DNV NYHPDKA+K+
Sbjct: 1724 LDMFTSEEQDILSDVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKAMKM 1783
Query: 278 GSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYFR 99
G+G+D+ V+KH S+Q+SRC ++VSTDG +DFSYRK LE+F++ KYPE FI KYFR
Sbjct: 1784 GAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPEFVDEFIGKYFR 1843
Query: 98 KGRTEGGHE 72
+ R+ G E
Sbjct: 1844 RPRSGGNRE 1852
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 345 bits (884), Expect = 5e-92
Identities = 241/742 (32%), Positives = 355/742 (47%), Gaps = 143/742 (19%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
SSIVASCSWGKHVAVGTG+ F ILW+ KE+ KQD V DV+NFLH+VR S E +AC
Sbjct: 1205 SSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFLHMVR-SGKSEEPTSAC 1263
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEI------------------- 1584
LG EI+DI +++ E +LSPE +P F+D + +
Sbjct: 1264 LGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAV 1323
Query: 1583 -----QCNKEQNGTLYNENSNKSNWE------------TNSFESGGSREWNGDQGWNSKN 1455
Q +NG N +S+ ++W TN+ E+ + W+ W +K
Sbjct: 1324 STGGGQWESNENGKATN-SSDGNDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGNK- 1381
Query: 1454 ATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPSSGGWNNVES---------------- 1323
AT + D W S+ V+ + SME + P SGGW++ +
Sbjct: 1382 ATNSSNDND-WSNCSTKEVERDSFTSMEKT---PKSGGWDSASTWGTKTKDDSFKRETAP 1437
Query: 1322 ------------RKELSDDWNKRVEEAKATNTIKDDGKTQWGQWKTSPDSDVKLLDE--- 1188
+ E D ++K+ E A + +D ++ G KT + ++ D+
Sbjct: 1438 KKSSQWSGLQKDKAETQDAFHKKAEMASKSGGWEDKAWSR-GTSKTEDNWSSQVKDKAES 1496
Query: 1187 -----QLCQSKSGQMGAWSAWGTNKFPTQASHTEKSLESPRFGGWNDFES---HKKHTDA 1032
Q SK+ G+ W N S GWND ++ +K +D
Sbjct: 1497 FQVQVQEVSSKTNGWGSTGGWTKNSGGDHQSEA----------GWNDGQASMDREKVSDR 1546
Query: 1031 WDKRAEE-----------------------TKATGWSNKEGKTEWGQKRSYNSDTNKMGE 921
WD++A + +KA S+ W +++S + +
Sbjct: 1547 WDRKATQKLESHQTSSWGSPTVGDSKDSFPSKAVDHSDSVVNHSWDRQKSPEASQGFGND 1606
Query: 920 QMNQHKSSMWSSSSVADETPSXXXXXXXXXXXXXKESLVTNIMEEQGSQSEKNWDSF--- 750
Q KS S+A+ + + + EQ S + WDS
Sbjct: 1607 AWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSDHGFDQVTNEQKSSDTRGWDSQEKT 1666
Query: 749 -----------GGKNW-SENEVQGQWG----THKDSAVESQE-----------------W 669
++W S+N+ G WG ++ + ESQ+ W
Sbjct: 1667 DKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSSTQFSQLKPPETSLGW 1726
Query: 668 DKEGSSVKSHAWGTNVRLEQGKKPTASHGWDTSN--SEGW-------KLKKSYRGKSPGK 516
+++ S SH WG++ ++ + T+SHGWD N S+GW K +K+ KSPG
Sbjct: 1727 EQQKSPEVSHGWGSH---KESSEQTSSHGWDKKNQGSKGWGGNAGEWKNRKNRPPKSPGM 1783
Query: 515 LDDRNNWNASGIFTATRQRLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDD 336
+D N A ++TA+ QRLD FTSEEQDIL+D+EPIM SIR++MHQS DGDPL+ +D
Sbjct: 1784 SNDDANLRA--LYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAED 1841
Query: 335 QSYVLDNVLNYHPDKALKIGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLEN 156
QS+VL +V N+HPDKA K+G+G+D+ V++HSS+QESRCFY+V+TDG EDFSYRK L+N
Sbjct: 1842 QSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDN 1901
Query: 155 FLKDKYPENAMSFISKYFRKGR 90
F+K KYP+ A F++KYFRK R
Sbjct: 1902 FIKGKYPDLAEMFVAKYFRKPR 1923
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 342 bits (877), Expect = 3e-91
Identities = 220/650 (33%), Positives = 330/650 (50%), Gaps = 49/650 (7%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
+SIVASCSWGKHVAVGTG F +LW+T+E+E Q+G DVFNFLH+V +++ E T
Sbjct: 1218 ASIVASCSWGKHVAVGTGVRFDVLWDTREVELTQEGGLDVFNFLHMVS-TANVEEATTGA 1276
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
LG E+DD+ L + + S SPE N + RP F+D V+ D+ + KSN
Sbjct: 1277 LGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLVEFDD----------KLGDLPEKSN 1326
Query: 1526 WETNSF---ESGGSREWNGDQGWNSKNATAVTPKTDAWPGWSSDRVQTQANHSMEP---- 1368
WE +S +S G ++W+ D+ T P D W W +++ +TQ ++S E
Sbjct: 1327 WEKDSSFHTDSNGGKDWSVDKNVG----TVAVP--DVWSSWGTEKGKTQDSNSAEAQLDS 1380
Query: 1367 --SGVSPSSGGWNNVESRKELSDDWNK-----------------------------RVEE 1281
S V +S W +++ + W
Sbjct: 1381 KKSSVLDTSSAWGKNPAKENTTSTWGTTTASENDWCGRGVGEDDSATLSGKKSGVLNTSS 1440
Query: 1280 AKATNTIKDDGKTQWGQWKTSPDSDVKLLDEQLCQSKSGQMGAWSAWGTNKFPTQASHTE 1101
A ATNT ++D + WG T+P + ++ W + + + +
Sbjct: 1441 AWATNTAREDAASAWG---TNPAKENSTSTWGTTRANEND---WCGREVGQDDSASLSVK 1494
Query: 1100 KSLESPRFGGWNDFESHKKHTDAWDKRA--EETKATGWSNKEGKTEW-GQKRSYNSDTNK 930
KS W + + AW K E T +T + + +W G+ ++ +
Sbjct: 1495 KSSVLDTSSAWATNTAREDAASAWGKHPAKENTTSTWGTTTASENDWCGRGVGHDDSASL 1554
Query: 929 MGEQMNQ-HKSSMWSSSSVADETPSXXXXXXXXXXXXXKESLVTNIMEEQGSQSEKNWDS 753
G++ + + SS+W++++ ++ S N G+ + D
Sbjct: 1555 SGKKSSVLNTSSVWATNTAREDATSAWGKNPAKE----------NTTSTWGTTTASENDW 1604
Query: 752 FGGKNWSENEVQGQWGTHKDSAVESQEWDKE----GSSVKSHAWGTNVRLEQGKKPT--A 591
G + V Q +D + WD S ++H WG + R +Q KK
Sbjct: 1605 CGREAGKVEPVDLQPTKPQDDSASLSGWDSPTGDGNSGERNHQWGQH-RGDQTKKNRFEG 1663
Query: 590 SHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGIFTATRQRLDQFTSEEQDILSDVE 411
+ W +S E WK K+ KSPG ++D + A ++T TRQRLD FTSEEQD+LS++E
Sbjct: 1664 ARNWVSSPGE-WK-NKNRPPKSPGMVNDNSTMGA--LYTVTRQRLDMFTSEEQDVLSNIE 1719
Query: 410 PIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDKALKIGSGVDYITVNKHSSYQ 231
P+M S+RRIMHQS DGDPL+ DDQS+VLDNV NYHPDKA K+G G+D++TVN+H S+Q
Sbjct: 1720 PVMRSLRRIMHQSGYNDGDPLSGDDQSFVLDNVFNYHPDKAAKMGCGIDHLTVNRHGSFQ 1779
Query: 230 ESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYF-RKGRTE 84
+SRCF++VSTDGR EDFSYRK L+N++++K+P+ A +FI KYF R+G E
Sbjct: 1780 DSRCFFVVSTDGRTEDFSYRKCLDNYIREKFPDLAETFIGKYFSRRGNRE 1829
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 334 bits (856), Expect = 9e-89
Identities = 235/667 (35%), Positives = 336/667 (50%), Gaps = 62/667 (9%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
SS+VA+CSWGKHVAVGTG+ F +LW T+ E QD DV++FLH+VR S+ E DT C
Sbjct: 1208 SSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLHMVRSSTGIEESDTGC 1267
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNE----NS 1539
LG E+D +E + + SLSPE N +P F+D V+ NK++N +E S
Sbjct: 1268 LGEEVDGLE---DEFDWSLSPEHNLCSDKPVFEDLVEDQSWLENKQENANWDSEADCRKS 1324
Query: 1538 NKSNWET-----------------------NSFESGGSRE-----WNGDQGWNSKNA--- 1452
++ WE + E GS W + W +
Sbjct: 1325 SEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDKLEKAGSPSRKPSGWGTEASWGESSCDKW 1384
Query: 1451 -TAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPS---SGGWNNVESRKELSDDWNKRVE 1284
+P ++ W ++ + +P VSP+ S GW + S + S D + V
Sbjct: 1385 ENVGSPAAKSFSEWGTE-ASWGKSFGDKPENVSPAAKTSSGWGSEASWGKSSGDRQENVG 1443
Query: 1283 EAKATNTIKDDGKTQWGQWKTSPDSDVKLLDEQLCQSKSGQMGAWSAWGTNKFPTQASHT 1104
+ + K WG+ S+ KL + + +K SAWGT ++S
Sbjct: 1444 GSASKPLSGWGAKASWGK-----SSEDKLEEVETTVAKPS-----SAWGTEASWDKSSEV 1493
Query: 1103 --EK---SLESPRFGGWNDFESHKKHTD--AWDKRAEETKATGWSNKEGKTEWGQKRSYN 945
EK E+P G + + K +D W A T + G + E + W K S+
Sbjct: 1494 TLEKVAAPAENPLSGWGTEAQDSGKSSDWSEWKDHANATASWGRNGSEENSGWDTKASWK 1553
Query: 944 SDTNKMGEQMNQHKSSMWSSSSV--ADETPSXXXXXXXXXXXXXKESLVTNIMEEQGSQS 771
+ K ++++ S++ +SSSV A E S ++S+V I +
Sbjct: 1554 T---KALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVPDA 1610
Query: 770 EKNWDSFGGKNWSENEVQG----QWGTHKDSAVESQE------WDKE----GSSVKSHAW 633
+ DS GK +G WG K + ES + WD GS + W
Sbjct: 1611 KGTDDSCWGKQKLTENAKGTDDSSWGKQKHTENESPQPASSNAWDLPDATGGSETEMQVW 1670
Query: 632 GTNVRLEQGKKPTASHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGIFTATRQRLD 453
G + R E KK + GW +S+ E WK KK+ +SPG ++D + NA ++T TRQRLD
Sbjct: 1671 GQS-RKEPFKK---NRGWASSSGE-WKGKKNRPPRSPGVVNDDSTVNA--MYTVTRQRLD 1723
Query: 452 QFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDKALKIGS 273
FTSEEQDILS VEPIM SIRRIMHQS DGD L+ DD+S++ DNV NYHPDKA+K+G+
Sbjct: 1724 MFTSEEQDILSHVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKAMKMGA 1783
Query: 272 GVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYFRKG 93
G+D+ V+KH S+Q+SRC ++VSTDG +DFSYRK LE+F++ KYP+ FI KYFR+
Sbjct: 1784 GIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPDLVDEFIGKYFRRP 1843
Query: 92 RTEGGHE 72
R+ G E
Sbjct: 1844 RSGGNRE 1850
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 331 bits (848), Expect = 8e-88
Identities = 241/711 (33%), Positives = 338/711 (47%), Gaps = 110/711 (15%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
SSIVASC+WGKHV VGTG+ F +LW+TKE +G DV++FL++VR ++ G E TAC
Sbjct: 1211 SSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEGSMDVYSFLNMVRSTAGGEESVTAC 1270
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEI------QCNKEQNGTLYNE 1545
LG E+DD+ L++ D +LSPE N +PTF+D + + + N E+ +L +
Sbjct: 1271 LGAEVDDLMLEDEDW--NLSPEHNSSSDKPTFEDSAEFQDFLGNQPAESNWEKISSLKDR 1328
Query: 1544 NSNKSNWETNSFESGGSREWNGDQGWNSKNATAVTPKTDAWPGWSSDRVQTQANHSMEPS 1365
+ + NW+ + G +E G N+ A V A GW + +T N +
Sbjct: 1329 SRSSGNWDVDK-NDGAVKEKPWSLGMNTAEANDV-----ASSGWDTAAARTTNNSWNSEN 1382
Query: 1364 GVSPSS--GGWNNVESRKELSDDWNKRVEEAKATNTIKDDGKTQWGQWKTSPDSDVKLLD 1191
V+ S+ GW + E + + +V+E T+ D G WG+ D D K +
Sbjct: 1383 NVAQSNSFSGW--ATKKPEPHNGFATKVQEEPTTSNDWDAG-AAWGR----KDRDNKFAE 1435
Query: 1190 EQLCQSKSGQMGAWSAWGTNKFPTQASH---------TEKSLESPRFGGWNDFESHKKHT 1038
+S G++ G NK + +K + GW + + T
Sbjct: 1436 TNASKSWWGKVTDGDESGQNKSKNKRPEDQDVGTHGWDDKMSQDQSISGWASKTTQEATT 1495
Query: 1037 DA--WDKRAEET---KATGW--------SNKEGKTEWGQKRSYN-SDT-NKMGEQMNQHK 903
++ WD + A GW N +G WG++ S N +DT + G+ +
Sbjct: 1496 ESLGWDSKGNSNPGDAACGWKAASTWGAENTDGDKLWGKEVSSNQADTASGWGKPKSPEI 1555
Query: 902 SSMWSS---SSVADETPSXXXXXXXXXXXXXKESLVTNIMEEQG-----SQSEKNWDSFG 747
S W S S +D +SL E G + ++ + S
Sbjct: 1556 SLGWGSTKESVKSDRGWGVSSSGGGRDKKTENQSLAGQGKESGGWGNKVTSNQADTASGW 1615
Query: 746 GKNWSENEVQGQWGTHKDSAVESQEW---------------DKEGSSV----KSHAW--- 633
GK S QG WG K+S E EW + E S+ K W
Sbjct: 1616 GKPKSSENSQG-WGLSKESGKEVHEWGVPNSAGGNGSETNNNNENQSLVEQGKESGWDNK 1674
Query: 632 ------GTNVRLEQGKKPTASHGWDTSNS-----EGWKLKKSYRGKSPG----------- 519
GT + K P S GW + GW + S G G
Sbjct: 1675 ASSNQEGTASGWGKPKSPALSEGWGSPREPVKAVHGWGVPNSGGGNGSGRDQQWGQQSRE 1734
Query: 518 ----KLDDRNNW---------------------NASGIFTATRQRLDQFTSEEQDILSDV 414
+ + W NASGIFT TRQRLD FTS+EQDILSD+
Sbjct: 1735 FKKDRFEGSRGWGSNNGDWKNKRNRPSKPHEDLNASGIFTTTRQRLDVFTSQEQDILSDI 1794
Query: 413 EPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDKALKIGSGVDYITVNKHSSY 234
EP+M SIRRIMHQ+ DGDPL+ DDQSYVLDNV +YHPDKA+K+G+G+D++TV++HS++
Sbjct: 1795 EPLMLSIRRIMHQTGYNDGDPLSADDQSYVLDNVFHYHPDKAVKMGAGIDHVTVSRHSNF 1854
Query: 233 QESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYF-RKGRTE 84
QESRCFYIVSTDG +DFSYRK LENF+K KYP+ A FI+KYF R+G +
Sbjct: 1855 QESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYFARRGNRQ 1905
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 327 bits (839), Expect = 9e-87
Identities = 232/651 (35%), Positives = 327/651 (50%), Gaps = 46/651 (7%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
SSIVASCSWGKHVAVGTG+ F +LW+ KE+ Q DV+NFLH++ S+SG T C
Sbjct: 1206 SSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHMLS-SASGPSSTTTC 1264
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
LG E+DD+ + E SLSPE + +P F+D D EN
Sbjct: 1265 LGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADF---------------ENDLDFQ 1309
Query: 1526 WETNSFESGGSRE----WNGDQGWNSKN--------ATAVTPKTDAWPGWSSDRVQTQAN 1383
+S+E G S + WN WN K A T K W W + + +TQ
Sbjct: 1310 PAESSWEKGVSLDKVSSWNVSSAWNKKAEDGDKFAAALTSTTKQSDWCDWGTSKSKTQ-- 1367
Query: 1382 HSMEPSGVSPSSGGWNNVESRKELSDDWN---KRVEEAKATNTIKDDGKTQWGQWKTSPD 1212
+ + + S+ ++K DW + +E AT T + + +W W+TS
Sbjct: 1368 ---DAAAAATST-------TKKTEWCDWGTSKSKTQEVAATVTGTAE-QNEWCDWRTSKS 1416
Query: 1211 SDVKLLDEQLCQSKSGQMGAWSAWGTNKFPTQ--ASHTEKSLESPRFGGWNDFESHKKHT 1038
K+ + + + W WGT+K TQ A+ ++E+ W D+ K T
Sbjct: 1417 ---KIQVVAAAVTSTTKQSEWGDWGTSKSKTQDVAAAVTGTMETE----WGDWGKGKSKT 1469
Query: 1037 DAWDKRAEETKATGWSNKEGK-TEWGQKRSYNSDTNKMGEQMNQHKSSMWSSSSVADETP 861
+ + T N++ K ++WG K++ DT + + KS+ AD
Sbjct: 1470 QDVSPKVDGTCV----NEQTKLSDWGLKKN---DTQDVSMEEKTFKSNG------ADTGT 1516
Query: 860 SXXXXXXXXXXXXXKESLVTNIMEEQGSQSEKNWDSFGGKNWSENEVQGQWGTHK----- 696
S G +SEK D+ WS WGT
Sbjct: 1517 SWGT---------------------MGKESEKP-DANDALPWSG------WGTQDVIPTK 1548
Query: 695 --DSAVESQEWDKEGSSVKSHAWGTNVRLEQGKKPTASHGWDTSNSEG------------ 558
D + +S W+++ S S WG+ L++ +P +S+GWDT N G
Sbjct: 1549 TLDDSSKSSGWEQQKSPECSQGWGS---LDESNQPASSNGWDTPNGLGSTQSEKQHQWGQ 1605
Query: 557 ------WKL---KKSYRGKSPGKLDDRNNWNASGIFTATRQRLDQFTSEEQDILSDVEPI 405
W KK++ KS ++D ++ A ++TATRQRLD FTSEEQDILSDVEP+
Sbjct: 1606 SRGSRRWASDASKKNHPVKSARVMNDDSSMAA--MYTATRQRLDMFTSEEQDILSDVEPL 1663
Query: 404 MHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDKALKIGSGVDYITVNKHSSYQES 225
M SIR+IMHQS DGDPL+ DQS++L+NV +HPDKA+K+G+GVDY+ V+KHS++ +S
Sbjct: 1664 MQSIRKIMHQSGYNDGDPLSALDQSFILENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDS 1723
Query: 224 RCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYFRKGRTEGGHE 72
RCFY+VSTDGR +DFSYRK L+NF+K KYP+ A FI+KYFRK R G E
Sbjct: 1724 RCFYVVSTDGRKQDFSYRKCLDNFIKGKYPDMADVFIAKYFRKPRFGGFRE 1774
>emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera]
Length = 1081
Score = 309 bits (792), Expect = 2e-81
Identities = 233/713 (32%), Positives = 317/713 (44%), Gaps = 124/713 (17%)
Frame = -3
Query: 1838 TGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTACLGGEIDDIELDNGDLE 1659
TG+ F +LW+TKEI QDG D+++FLHLVR S G+E DTACLG E++D+ L++ +LE
Sbjct: 418 TGSRFDVLWDTKEIGPAQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLE 477
Query: 1658 RSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSNWETNSFESGGSREWNG 1479
+SPE + ++ +P F+D + ++ WE + +SGG +W
Sbjct: 478 LGMSPEHSSNFEKPVFEDSAEF-------------------QNTWENHVPDSGG--DWAV 516
Query: 1478 DQGWNSKNATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPSSGGWN-----------N 1332
+Q +K TA T K AW W +D+V + S S S GW+ N
Sbjct: 517 NQ---NKETTASTLKPSAWSSWGTDKVTMKDTFSTREPEESSRSAGWDDKGTWGTDKAQN 573
Query: 1331 VESRKELSDD---------------------WNKRVEEAKATNTIKDDGKTQWGQWKTSP 1215
R+ D W K+++EA T K+DGK Q + + S
Sbjct: 574 TAFRRTHEDSPRSSGRDETFRDGRPQFASSAWGKKIDEADKTGWNKNDGKPQMDKLRESC 633
Query: 1214 DSDVKLLDEQLCQSKSGQMGAWSA-WGTNKFPTQASHTEKSLESPRFGGWNDFESHKKHT 1038
D D K+ E+ QS G + + + W N+ + ++S + N E
Sbjct: 634 DWDCKVAQEKTTQSTYGGISSTTGDWKKNELQMEVVQHDESPVNEHSWDANLPE------ 687
Query: 1037 DAWDKRAEETKATGWSNKEGKTEWGQKRSYNSDTNKMGEQMNQHKSSMWSSSSVADETPS 858
D A+ T + GW + GK +W KR S + EQ WSSS
Sbjct: 688 ---DPLAQATTSVGWDSSTGK-DW-TKRKLQSPS----EQQRDPAIKSWSSSH------- 731
Query: 857 XXXXXXXXXXXXXKESLVTNIMEEQGSQ--SEKNWDSFGGKNWSENEVQGQWGTHKDSAV 684
N+M+EQ +Q S WDS G K W++ E Q QW + SAV
Sbjct: 732 -------------------NVMKEQSNQPASTHGWDSPGAKGWNDVEEQSQW-NQRGSAV 771
Query: 683 ESQEWDKEGSSVKSHAWGTNVRLEQ----------------------------GKK--PT 594
K S SH WG + Q GKK P
Sbjct: 772 ------KNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHESETQSQWGQPSGKKSRPE 825
Query: 593 ASHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGIFTATRQRLDQFTSEEQDILSDV 414
S GW ++N+E WK KK+ K G L+D +++A GIFTATRQR+D FTSEEQDIL DV
Sbjct: 826 GSRGWGSNNTE-WKNKKNRPNKPQGPLND--DYSAGGIFTATRQRVDIFTSEEQDILLDV 882
Query: 413 EPIMHSIRRIMHQSR------------------------DKDGDPLAPDDQSYVLDNVLN 306
EPIM SIRRIMHQ+ G P D + + V
Sbjct: 883 EPIMQSIRRIMHQAGYLSMNLYANIFIVVAGMVKIEYLVYGQGVPTLGDTKHWHSGAVSL 942
Query: 305 YHPDKALKIGSGV-----------------------------------DYITVNKHSSYQ 231
H ++ KI GV DY+ V++HSS+
Sbjct: 943 PHSERTYKIDIGVQYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMVSRHSSFL 1002
Query: 230 ESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYFRKGRTEGGHE 72
ESRCFY+VSTDG EDFSYRK LENF+K+KYP+NA +FI KYFR+ R G E
Sbjct: 1003 ESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAGGNRE 1055
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 286 bits (733), Expect = 2e-74
Identities = 215/678 (31%), Positives = 309/678 (45%), Gaps = 81/678 (11%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
SSIVASCSWGKHVAVGTG+ F I+W+ KEI++ + +V+ FL++V+ ++G E AC
Sbjct: 1308 SSIVASCSWGKHVAVGTGSKFDIVWDPKEIKTNEIEGMNVYKFLNMVKGLANGEEETNAC 1367
Query: 1706 LGGEIDDI-ELDNGDLERSLSPEQNFDYVRPTFDDDVDVDE------IQCNKEQNGTLYN 1548
LG +IDD+ + +NGD + S FD V FD+ ++ NK+Q
Sbjct: 1368 LGEDIDDLFDDENGDFDMSPQHASGFDAV---FDETFELPNGSTSNGWDSNKDQIDQPNT 1424
Query: 1547 ENSNKSNWETNSFE---------SGGSREWNG------DQG---WNSKNATAVTPKTDAW 1422
+++ S W N + S S W DQ W + K+ AW
Sbjct: 1425 NSNDWSGWGPNKSDLQVDVIQEDSSKSSAWGAATNQKSDQSASAWGKAVVQEDSSKSGAW 1484
Query: 1421 ----------PGWSSDRVQTQANHSMEPSGV------SPSSGGWNNVESRKELSDDWNKR 1290
P W + Q +++ S G S SG W N +S + +D +K
Sbjct: 1485 GTATNQNSEQPSWGAATNQ-KSDQSASAWGKAVVQEDSSKSGAWGNAKS--VVQEDSSKS 1541
Query: 1289 VEEAKATNTIKDDGKTQWGQWKTSPD------SDVKLLDEQLCQSKSGQMGAWSAWGTNK 1128
A NT ++ WGQ + K + Q S G W AWG++K
Sbjct: 1542 GAPA---NTNHSSDQSCWGQITGGEERAQGESGGTKKWKADVSQEDSTNSGGWKAWGSSK 1598
Query: 1127 FPTQASHTEKSLESPRFGGWNDFESHKKHTDAWDKRAEETKATGWS---NKEGKTEWGQK 957
+ K +S WN + K D K ++++ A G + + + ++ WGQK
Sbjct: 1599 PEVHEGESTKVQDS-----WNS-QKWKAGEDVSQKDSQKSSAWGATKPKSNDNRSSWGQK 1652
Query: 956 RSY------NSDTNKMGEQMNQHKSSMWSSSSVADETPSXXXXXXXXXXXXXKESLVTNI 795
+ +S + EQ ++ W + V S ++ N
Sbjct: 1653 KDEIHVMPEDSSRSNAWEQKPENVKDSWVAK-VPVANSSWGKAKSPENRPWDSKNEPNNS 1711
Query: 794 MEEQGSQSEKNWDSFGGKNWSENEVQGQWGTHKDSAVESQEWDKEGSSVKS--------- 642
+ SQ + WDS +NE WG K + ESQ WD + S S
Sbjct: 1712 FGKPNSQENEPWDS-------KNESDSSWG--KPKSQESQPWDSKNESNSSWGKPKSQEN 1762
Query: 641 HAWGTNVRLEQGKKPTASHGWDT----SNSEGWKL------------KKSYRGKSPGKLD 510
H W + + + S GWD+ +NSE K K + G G +
Sbjct: 1763 HPWDSK---NESNQTAGSRGWDSQVASANSESDKSFQWGKQGRDSFKKNRFEGSQSGGPN 1819
Query: 509 DRNNWNASGIFTATRQRLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQS 330
+ N S QR + +T EEQDI+ D+EPI+ SIRRIM DGDPLA +DQ
Sbjct: 1820 AGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQK 1879
Query: 329 YVLDNVLNYHPDKALKIGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFL 150
YVL+NV +HPDK K+G GVD++ V+KHS++Q+SRC Y+V DG+ EDFSYRK LEN +
Sbjct: 1880 YVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLV 1939
Query: 149 KDKYPENAMSFISKYFRK 96
+ KYPE A SF KYFRK
Sbjct: 1940 RKKYPETAESFCGKYFRK 1957
>gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis thaliana]
Length = 1976
Score = 279 bits (713), Expect = 4e-72
Identities = 194/676 (28%), Positives = 313/676 (46%), Gaps = 71/676 (10%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
S++V SCSWGK V VGTG+ F++LWN KE DV++FL +V +S++ + +
Sbjct: 1207 STVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSFLQMV-ISTTNADAFVSS 1265
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
G ++ + E+ E + SPE++ P F+D D + + +G + ++S+ N
Sbjct: 1266 PGFDVTEEEM----AEWAESPERDSALGEPKFEDSADFQNLHDEGKPSGANWEKSSSWDN 1321
Query: 1526 WETNSFESGGSREWNGDQGWNSK-NATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPS 1350
+ E G S+ G+ S T K DAW W++ + + S S S
Sbjct: 1322 GCSGGSEWGVSKSTGGEANPESNWEKTTNVEKEDAWSSWNTRK-------DAQESSKSDS 1374
Query: 1349 SGGWNNVESRKELSDDWNKRVEEAKATNTIKDDGKTQWGQWKTSPDSDVKLLDEQLCQSK 1170
G W + N A + + ++ + W SD K D++ ++
Sbjct: 1375 GGAWGIKTKDADADTTPNWETSPAPKDSIVPENNEPTSDVWGHKSVSD-KSWDKKNWGTE 1433
Query: 1169 SGQMGAWSA-----WGTNKFPTQASHTEKSLESPRFGGWNDFESHKKHTDAWDKRAEETK 1005
S AW + WG++ + ++ + R +D S W+K++ ET+
Sbjct: 1434 SAP-AAWGSTDAAVWGSSDKKNSETESDAAAWGSRDKNNSDVGSGAGVLGPWNKKSSETE 1492
Query: 1004 ATG------------------WSNKEGKTE-----WGQKRSYNSDTNK------------ 930
+ G W K +T+ WG + NS+T
Sbjct: 1493 SNGATWGSSDKTKSGAAAWNSWDKKNIETDSEPAAWGSQGKKNSETESGPAAWGAWDKKK 1552
Query: 929 -----------MGEQMNQHK----SSMWSSSSVADETPSXXXXXXXXXXXXXKESLVTNI 795
MG++ N ++M + +T S S
Sbjct: 1553 SETEPGPAGWGMGDKKNSETELGPAAMGNWDKKKSDTKSGPAAWGSTDAAAWGSS----- 1607
Query: 794 MEEQGSQSEKNWDSFGGKNWSENEVQ------GQWGTHKDSAVESQEWDKEGS------S 651
++ S++E + ++G +N +E++ G WG +A + + + +
Sbjct: 1608 -DKNNSETESDAAAWGSRNKKTSEIESGAGAWGSWGQPSPTAEDKDTNEDDRNPWVSLKE 1666
Query: 650 VKSHAWGTNVRLEQG---KKPTASHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGI 480
KS R + G KK +S GW WK +++ + P R+ N + +
Sbjct: 1667 TKSREKDDKERSQWGNPAKKFPSSGGWSNGGGADWKGNRNHTPRPP-----RSEDNLAPM 1721
Query: 479 FTATRQRLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYH 300
FTATRQRLD FTSEEQ++LSDVEP+M ++R+IMH S DGDP++ DD+++VL+ +LN+H
Sbjct: 1722 FTATRQRLDSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFH 1781
Query: 299 PDKALKIGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMS 120
P K K+GSGVD+ITV+KH+ + +SRCF++VSTDG +DFSYRKSL N+L KYP+ A
Sbjct: 1782 PQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEE 1841
Query: 119 FISKYFRKGRTEGGHE 72
FI KYF K R G +
Sbjct: 1842 FIDKYFTKPRPSGNRD 1857
>ref|NP_181532.2| nuclear RNA polymerase D1B [Arabidopsis thaliana]
gi|75320513|sp|Q5D869.1|NRPE1_ARATH RecName:
Full=DNA-directed RNA polymerase V subunit 1; AltName:
Full=DNA-directed RNA polymerase D subunit 1b;
Short=AtNRPD1b; Short=Nuclear RNA polymerase D 1b;
AltName: Full=DNA-directed RNA polymerase E subunit 1;
Short=Nuclear RNA polymerase E 1; AltName: Full=Protein
DEFECTIVE IN MERISTEM SILENCING 5; AltName: Full=Protein
DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3; AltName:
Full=Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1;
AltName: Full=RNA polymerase IV subunit 1; Short=POL IV 1
gi|59939210|gb|AAX12373.1| DNA-directed RNA polymerase
alpha subunit [Arabidopsis thaliana]
gi|62822917|gb|AAY15198.1| DNA-dependent RNA polymerase
large subunit [Arabidopsis thaliana]
gi|330254673|gb|AEC09767.1| nuclear RNA polymerase D1B
[Arabidopsis thaliana]
Length = 1976
Score = 279 bits (713), Expect = 4e-72
Identities = 194/676 (28%), Positives = 313/676 (46%), Gaps = 71/676 (10%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
S++V SCSWGK V VGTG+ F++LWN KE DV++FL +V +S++ + +
Sbjct: 1207 STVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSFLQMV-ISTTNADAFVSS 1265
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
G ++ + E+ E + SPE++ P F+D D + + +G + ++S+ N
Sbjct: 1266 PGFDVTEEEM----AEWAESPERDSALGEPKFEDSADFQNLHDEGKPSGANWEKSSSWDN 1321
Query: 1526 WETNSFESGGSREWNGDQGWNSK-NATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPS 1350
+ E G S+ G+ S T K DAW W++ + + S S S
Sbjct: 1322 GCSGGSEWGVSKSTGGEANPESNWEKTTNVEKEDAWSSWNTRK-------DAQESSKSDS 1374
Query: 1349 SGGWNNVESRKELSDDWNKRVEEAKATNTIKDDGKTQWGQWKTSPDSDVKLLDEQLCQSK 1170
G W + N A + + ++ + W SD K D++ ++
Sbjct: 1375 GGAWGIKTKDADADTTPNWETSPAPKDSIVPENNEPTSDVWGHKSVSD-KSWDKKNWGTE 1433
Query: 1169 SGQMGAWSA-----WGTNKFPTQASHTEKSLESPRFGGWNDFESHKKHTDAWDKRAEETK 1005
S AW + WG++ + ++ + R +D S W+K++ ET+
Sbjct: 1434 SAP-AAWGSTDAAVWGSSDKKNSETESDAAAWGSRDKNNSDVGSGAGVLGPWNKKSSETE 1492
Query: 1004 ATG------------------WSNKEGKTE-----WGQKRSYNSDTNK------------ 930
+ G W K +T+ WG + NS+T
Sbjct: 1493 SNGATWGSSDKTKSGAAAWNSWDKKNIETDSEPAAWGSQGKKNSETESGPAAWGAWDKKK 1552
Query: 929 -----------MGEQMNQHK----SSMWSSSSVADETPSXXXXXXXXXXXXXKESLVTNI 795
MG++ N ++M + +T S S
Sbjct: 1553 SETEPGPAGWGMGDKKNSETELGPAAMGNWDKKKSDTKSGPAAWGSTDAAAWGSS----- 1607
Query: 794 MEEQGSQSEKNWDSFGGKNWSENEVQ------GQWGTHKDSAVESQEWDKEGS------S 651
++ S++E + ++G +N +E++ G WG +A + + + +
Sbjct: 1608 -DKNNSETESDAAAWGSRNKKTSEIESGAGAWGSWGQPSPTAEDKDTNEDDRNPWVSLKE 1666
Query: 650 VKSHAWGTNVRLEQG---KKPTASHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGI 480
KS R + G KK +S GW WK +++ + P R+ N + +
Sbjct: 1667 TKSREKDDKERSQWGNPAKKFPSSGGWSNGGGADWKGNRNHTPRPP-----RSEDNLAPM 1721
Query: 479 FTATRQRLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYH 300
FTATRQRLD FTSEEQ++LSDVEP+M ++R+IMH S DGDP++ DD+++VL+ +LN+H
Sbjct: 1722 FTATRQRLDSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFH 1781
Query: 299 PDKALKIGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMS 120
P K K+GSGVD+ITV+KH+ + +SRCF++VSTDG +DFSYRKSL N+L KYP+ A
Sbjct: 1782 PQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEE 1841
Query: 119 FISKYFRKGRTEGGHE 72
FI KYF K R G +
Sbjct: 1842 FIDKYFTKPRPSGNRD 1857
>gb|AAB95289.1| unknown protein [Arabidopsis thaliana]
Length = 839
Score = 279 bits (713), Expect = 4e-72
Identities = 194/676 (28%), Positives = 313/676 (46%), Gaps = 71/676 (10%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
S++V SCSWGK V VGTG+ F++LWN KE DV++FL +V +S++ + +
Sbjct: 70 STVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSFLQMV-ISTTNADAFVSS 128
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
G ++ + E+ E + SPE++ P F+D D + + +G + ++S+ N
Sbjct: 129 PGFDVTEEEM----AEWAESPERDSALGEPKFEDSADFQNLHDEGKPSGANWEKSSSWDN 184
Query: 1526 WETNSFESGGSREWNGDQGWNSK-NATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPS 1350
+ E G S+ G+ S T K DAW W++ + + S S S
Sbjct: 185 GCSGGSEWGVSKSTGGEANPESNWEKTTNVEKEDAWSSWNTRK-------DAQESSKSDS 237
Query: 1349 SGGWNNVESRKELSDDWNKRVEEAKATNTIKDDGKTQWGQWKTSPDSDVKLLDEQLCQSK 1170
G W + N A + + ++ + W SD K D++ ++
Sbjct: 238 GGAWGIKTKDADADTTPNWETSPAPKDSIVPENNEPTSDVWGHKSVSD-KSWDKKNWGTE 296
Query: 1169 SGQMGAWSA-----WGTNKFPTQASHTEKSLESPRFGGWNDFESHKKHTDAWDKRAEETK 1005
S AW + WG++ + ++ + R +D S W+K++ ET+
Sbjct: 297 SAP-AAWGSTDAAVWGSSDKKNSETESDAAAWGSRDKNNSDVGSGAGVLGPWNKKSSETE 355
Query: 1004 ATG------------------WSNKEGKTE-----WGQKRSYNSDTNK------------ 930
+ G W K +T+ WG + NS+T
Sbjct: 356 SNGATWGSSDKTKSGAAAWNSWDKKNIETDSEPAAWGSQGKKNSETESGPAAWGAWDKKK 415
Query: 929 -----------MGEQMNQHK----SSMWSSSSVADETPSXXXXXXXXXXXXXKESLVTNI 795
MG++ N ++M + +T S S
Sbjct: 416 SETEPGPAGWGMGDKKNSETELGPAAMGNWDKKKSDTKSGPAAWGSTDAAAWGSS----- 470
Query: 794 MEEQGSQSEKNWDSFGGKNWSENEVQ------GQWGTHKDSAVESQEWDKEGS------S 651
++ S++E + ++G +N +E++ G WG +A + + + +
Sbjct: 471 -DKNNSETESDAAAWGSRNKKTSEIESGAGAWGSWGQPSPTAEDKDTNEDDRNPWVSLKE 529
Query: 650 VKSHAWGTNVRLEQG---KKPTASHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGI 480
KS R + G KK +S GW WK +++ + P R+ N + +
Sbjct: 530 TKSREKDDKERSQWGNPAKKFPSSGGWSNGGGADWKGNRNHTPRPP-----RSEDNLAPM 584
Query: 479 FTATRQRLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYH 300
FTATRQRLD FTSEEQ++LSDVEP+M ++R+IMH S DGDP++ DD+++VL+ +LN+H
Sbjct: 585 FTATRQRLDSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFH 644
Query: 299 PDKALKIGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMS 120
P K K+GSGVD+ITV+KH+ + +SRCF++VSTDG +DFSYRKSL N+L KYP+ A
Sbjct: 645 PQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEE 704
Query: 119 FISKYFRKGRTEGGHE 72
FI KYF K R G +
Sbjct: 705 FIDKYFTKPRPSGNRD 720
>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1|
NRPD1b [Arabidopsis lyrata subsp. lyrata]
Length = 1947
Score = 278 bits (711), Expect = 6e-72
Identities = 201/689 (29%), Positives = 315/689 (45%), Gaps = 84/689 (12%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
S++V SCSWGK V VGTG+ F++LWN KE DV++FL +VR +++ + +
Sbjct: 1207 STVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSFLQMVRSTTNADAY-VSS 1265
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
G ++ + E+ E + SPE++ P F+D + + + + + + ++S+ N
Sbjct: 1266 PGFDVTEEEM----AEWAESPERDSALGEPKFEDSAEFQNLHDEGKPSESNWEKSSSWDN 1321
Query: 1526 WETNSFESGGSREWNGD-------------------QGWNSKNATAVTPKTD---AW--- 1422
+ E G S+ G+ WN+K + K+D AW
Sbjct: 1322 GCSGGSEWGVSKNTGGEANPESNWEKTTNVEKEDAWSSWNTKKDAQESSKSDSGVAWGLK 1381
Query: 1421 ---------PGWSSDRVQTQANHSMEPSGVSPSSGGWNNVESRKELSDDWNKRVEEAKAT 1269
P W + QT S+ P P+S W + + D N E A A
Sbjct: 1382 TKDDDADTTPNWETRPAQTD---SIVPENNEPTSDVWGHKSGSDKSWDKKNGGTESAPAA 1438
Query: 1268 ---------------NTIKDDGKTQWGQWKTSPDSDVKLLDEQLCQSKSGQMGAWSAWGT 1134
N+ + WG + +S+V S +G +G W+ +
Sbjct: 1439 WGSTDAAVWGSSDKKNSETESDAAAWGS-RDKKNSEVG--------SGAGVLGPWNKKSS 1489
Query: 1133 NKFPTQASHTEKSLESPRFGGWNDFESHKKHTD----AWDKRAEETKAT--------GWS 990
A+ W+ ++ TD AW +++ T W
Sbjct: 1490 KTESDGATWGSSDKTKSGAAAWSSWDKKNMETDSEPAAWGSQSKNKPETESGPSTWGAWD 1549
Query: 989 NKEGKTE-----WGQKRSYNSDTNKMGEQM---NQHKSSMWSSSSVADETPSXXXXXXXX 834
K+ +TE WG NS+T M ++ KS+ S + T
Sbjct: 1550 TKKSETESGPAGWGIVDKKNSETESGPAAMGNWDKKKSNTESGPAAWGST---------- 1599
Query: 833 XXXXXKESLVTNIMEEQGSQSEKNWDSFGGKNWSENEVQ------GQWGTHKDSAV-ESQ 675
++ V ++ S++E + ++G ++ +E + G WG +A E
Sbjct: 1600 ------DAAVWGFSDKNNSETESDAAAWGSRDKKTSETESGAAAWGSWGQPTPTAANEDA 1653
Query: 674 EWDKEGSSV-----KSHAWGTNVRLEQG---KKPTASHGWDTSNSEGWKLKKSYRGKSPG 519
D E V KS R++ G KK +S GW WK K+++ + P
Sbjct: 1654 NEDDENPWVSLKETKSRDKDDKERIQWGNPAKKFPSSGGWSNGGGADWKGKRNHTPRPP- 1712
Query: 518 KLDDRNNWNASGIFTATRQRLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPD 339
R+ N + +FTATRQRLD FTSEEQ++LSDVEP+M ++R+IMH S DGDP++ D
Sbjct: 1713 ----RSEDNLAPMFTATRQRLDSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDGDPISDD 1768
Query: 338 DQSYVLDNVLNYHPDKALKIGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLE 159
D+++VL+ +LN+HP K K+GSGVD+ITV+KH+ + +SRCF++VSTDG +DFSYRKSL
Sbjct: 1769 DKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLN 1828
Query: 158 NFLKDKYPENAMSFISKYFRKGRTEGGHE 72
N+L KYP+ A FI KYF K R G +
Sbjct: 1829 NYLMMKYPDRAEEFIDKYFTKPRPSGNRD 1857
>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
gi|482562261|gb|EOA26451.1| hypothetical protein
CARUB_v10022497mg [Capsella rubella]
Length = 1959
Score = 276 bits (705), Expect = 3e-71
Identities = 193/670 (28%), Positives = 314/670 (46%), Gaps = 65/670 (9%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
S++V SCSWGK V VGTG+ F++LWN KE DV++FL +VR ++S F +
Sbjct: 1207 STVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSFLQMVRSTTSSDAF-VSS 1265
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
G ++ + E+ E + SPE++ P F+D + + + +Q+ + + ++S+ N
Sbjct: 1266 PGFDVTEEEM----AEWAESPERDSALGEPKFEDSAEFQNLHDDGKQSESNWEKSSSWDN 1321
Query: 1526 WETNSFESGGSREWNGDQGWNSK-NATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPS 1350
+ E G S+ G+ S T K DAW GW++ + + S S S
Sbjct: 1322 GCSGGSEWGVSKSTGGESNTESNWEKTTSVEKEDAWSGWNTKK-------DAQESSKSDS 1374
Query: 1349 SGGWNNVESRKELSDDWNKRVEEAKATNTIKDDGKTQWGQWKTSPDSDVKLLDEQLCQSK 1170
G W + + N A+ + + + + W +K + E+ K
Sbjct: 1375 GGAWGIKTKDDDANTTPNWETRPAQMDSIVPEINEPTSDVW------GLKSVSEKPWNKK 1428
Query: 1169 S-GQMGAWSAWGTNKFPTQASHTEKSLESPR-FGGWNDFESHKKHTDA---------WDK 1023
+ G A +AWG+ S +K+ E+ W + K+++D W+K
Sbjct: 1429 NWGTESAPAAWGSTDADAWGSSNKKNSETESDAAAWGSRD--KRNSDIGSGAGVLGPWNK 1486
Query: 1022 RAEETK--ATGWSNKEGKTE--------WGQKR--------SYNSDTNKMGEQMNQHKSS 897
++ ET+ A W + GKT+ W + + S N E + +
Sbjct: 1487 KSSETESDAAAWGSS-GKTKSDAATWSPWDKNNMEPDSEPAGWGSQGNMKSETETESNGA 1545
Query: 896 MWSSSSVADETPSXXXXXXXXXXXXXKESLVTNIMEEQGSQSEKNWDSFGG--KNWSENE 723
W SS + E ++ +++E S+G K SE E
Sbjct: 1546 SWGSSGKTKSGAAAWGSCDKNNMETNSEPSAWGSQGKKKAETESGPASWGAWDKKISETE 1605
Query: 722 ---------------------VQGQWGTHKDSAVESQEWDKEGS---SVKSHAWGTNVRL 615
G WG +A + + +G+ S+K G
Sbjct: 1606 SGLAGWGNGDKINSETESGAAAWGSWGQPSPTAADKDTNEDDGNPWVSLKETKSGEKDEK 1665
Query: 614 EQG-------KKPTASH--GWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGIFTATRQ 462
E+ K P+ GW W+ K+++ + P R+ N + +FTAT+Q
Sbjct: 1666 EKSQWGNPAKKFPSDGSYGGWSNGGGAEWRGKRNHTPRPP-----RSEDNLAPMFTATKQ 1720
Query: 461 RLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDKALK 282
RLD FTSEEQ++LSDVEP+M ++R+IMH S DG+P++ DD+++VL+ +LN+HP+K K
Sbjct: 1721 RLDSFTSEEQELLSDVEPVMRTLRKIMHMSGYPDGEPISDDDKTFVLEKILNFHPEKERK 1780
Query: 281 IGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYF 102
+GS VD+ITV+KH+++ ++RCF++VSTDG +DFSYRKSL N+L KYP+ A FI KYF
Sbjct: 1781 LGSAVDFITVDKHTTFTDTRCFFVVSTDGAKQDFSYRKSLNNYLMTKYPDRAEEFIDKYF 1840
Query: 101 RKGRTEGGHE 72
+K R G +
Sbjct: 1841 KKPRPSGNRD 1850
>ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutrema salsugineum]
gi|557112419|gb|ESQ52703.1| hypothetical protein
EUTSA_v10016128mg [Eutrema salsugineum]
Length = 1874
Score = 265 bits (678), Expect = 4e-68
Identities = 187/660 (28%), Positives = 304/660 (46%), Gaps = 63/660 (9%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
S++V SCSWGK V VGTG+ F++LWN KE + + DV++FL +VR +++ + ++
Sbjct: 1207 STVVGSCSWGKRVDVGTGSKFELLWNKKETGLENENETDVYSFLQMVRSTTNADAYASSP 1266
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNEN-SNKS 1530
G ++ + ++ E + SPE++ F+D + I + + + ++ S S
Sbjct: 1267 -GFDVTEEDM----AEWAESPERDSALGELKFEDSAEFQNIHDEGKPSESKWDNGFSGGS 1321
Query: 1529 NWETNSFESGGSREWNG------------DQGWNSKNATAVTPKTDAWPGWSSDRVQTQA 1386
W+ + G +G GWNSK + ++D+W W S A
Sbjct: 1322 EWDLSRNTGGEENPQSGWEKTTNVEKEDASSGWNSKKDAQESSRSDSWRAWGSKPKDNDA 1381
Query: 1385 N------------HSMEPSGVSPSSGGWNNVESRKELSDDWNKRVEEAKATNTIKDDGKT 1242
N SM PS W +++ N + E A A +D +
Sbjct: 1382 NTTPSWETRPAQKDSMVIENNEPSVDVWGPKSVSEKVWKKKNSKTESAPAAWVSRDKKNS 1441
Query: 1241 Q-------WG---QWKTSPDSDVKLLDEQLCQSKSGQMGAWSAWGTNKFPTQA------- 1113
+ WG + ++D +K + AW +WG + T++
Sbjct: 1442 ETELDASAWGFGDKVNKETETDAAAWGAGYKMNKETESAAWGSWGEKRSETESGDAGWGF 1501
Query: 1112 -SHTEKSLESPRFGGWNDFESHKKHTDA-------WDKRAEETKA--TGWSNKEGK---- 975
++T +ES G W + T + WDK+ ET++ W + + K
Sbjct: 1502 RNNTNSKVESGA-GAWGPQPTKSSDTGSGTPTWGTWDKKNSETESGPAAWGSPDNKNSEG 1560
Query: 974 ----TEWGQKRSYNSDTNKMGEQMNQHKSSMWSS-SSVADETPSXXXXXXXXXXXXXKES 810
T WG K NSDT S++W +S D +P+
Sbjct: 1561 ELGATNWGFKERKNSDTGS--------GSAVWGKKNSETDPSPAA--------------- 1597
Query: 809 LVTNIMEEQGSQSEKNWDSFG--GKNWSENEVQGQWGTHKDSAVESQEWDKEGSSVKSHA 636
WDS+G S+ + G G S + +K+ + +
Sbjct: 1598 ----------------WDSWGQPSATSSDKDTNGDDGNPWVSLKATNSGEKDETETRQ-- 1639
Query: 635 WGTNVRLEQGKKPTASHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNASGIFTATRQRL 456
WG + + P++ SN G KK+ ++PG + + +FTAT QRL
Sbjct: 1640 WGIPTK----RYPSSDSHGSWSNGGGADGKKNRPPRTPG-----SEMKLAPMFTATGQRL 1690
Query: 455 DQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDKALKIG 276
D FTSEEQ++LSDVEP+ +R I+H+S DG+P++ D+SYVL++VLN+HPDK K+G
Sbjct: 1691 DMFTSEEQELLSDVEPVTRKLRNILHRSGYPDGEPISDADKSYVLEHVLNFHPDKDSKLG 1750
Query: 275 SGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYFRK 96
SGVD+ITV+KH+++ ESRCF++VSTDG +DFSYRK + N++ +K+P A FI KY+++
Sbjct: 1751 SGVDFITVDKHTTFTESRCFFVVSTDGAKQDFSYRKCIINYVMEKFPNLAEEFIGKYYKR 1810
>ref|XP_007219786.1| hypothetical protein PRUPE_ppa024567mg [Prunus persica]
gi|462416248|gb|EMJ20985.1| hypothetical protein
PRUPE_ppa024567mg [Prunus persica]
Length = 792
Score = 262 bits (670), Expect = 3e-67
Identities = 196/621 (31%), Positives = 290/621 (46%), Gaps = 26/621 (4%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
+SIVASCSWGKHVAVGTGA F +LW+T+E+E Q+G DVFNFLH+V +++ E T
Sbjct: 231 ASIVASCSWGKHVAVGTGARFDVLWDTREVELTQEGGLDVFNFLHMVS-TANVEEATTGA 289
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
LG E+DD+ L + + S SPE N + RP F+D V+ D+ + KSN
Sbjct: 290 LGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLVEFDD----------KLGDLPEKSN 339
Query: 1526 WETNSF---ESGGSREWNGDQGWNSKNATAVTPKTDAWPGWSSDRVQTQ----------- 1389
WE +S +S G ++W+ D+ T P D W W +D+ +
Sbjct: 340 WEKDSSFHTDSNGGKDWSVDKNVG----TVAVP--DVWSSWGTDKGENDWCGRGVGEDDF 393
Query: 1388 ANHSMEPSGVSPSSGGWNNVESRKELSDDWNKRVEEAKATNT--IKDDGKTQW-GQWKTS 1218
+ S + SGV +S W +R++ + W + T+T + W G+W
Sbjct: 394 VSLSGKKSGVLNTSSAWATNTAREDAASAWGTNPAKENTTSTWGTTTASENDWCGRWVGQ 453
Query: 1217 PDSDVKLLDEQLCQSKSGQMGAWSAWGTNKFPTQASHTEKSLESPRFGGWNDFESHKKHT 1038
DS L KS + SAW TN A+
Sbjct: 454 DDS------ASLSVKKSSVLDTSSAWATNTAREDAASA---------------------- 485
Query: 1037 DAWDKRAEETKATGWSNK-EGKTEW-GQKRSYNSDTNKMGEQMNQ-HKSSMWSSSSVADE 867
+ A+E + W + +W G+ ++ + G++ + + SS+W++++ ++
Sbjct: 486 -CGKQPAKENATSTWGTTLASENDWCGRGVGHDDSASLSGKKSSVLNTSSVWATNTARED 544
Query: 866 TPSXXXXXXXXXXXXXKESLVTNIMEEQGSQSEKNWDSFGGKNWSENEVQGQWGTHKDSA 687
S N G+ + D G + V Q +D +
Sbjct: 545 ATSAWGENPAKE----------NTTSTWGTTTASENDWCGREAGKVEPVDFQPTKPQDDS 594
Query: 686 VESQEWDKE----GSSVKSHAWGTNVRLEQGKKPT--ASHGWDTSNSEGWKLKKSYRGKS 525
WD S ++H WG + R +Q KK + W +S E WK K+ KS
Sbjct: 595 ASLSGWDSPTGDGNSGERNHQWGQH-RGDQTKKSRFEGARNWVSSPGE-WK-NKNRPPKS 651
Query: 524 PGKLDDRNNWNASGIFTATRQRLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLA 345
PG ++D + A ++T TR RLD FTSEE +LS++EP+M S+RRIMHQS DGDPL+
Sbjct: 652 PGMVNDNSTMGA--LYTVTRPRLDMFTSEEH-VLSNIEPVMRSLRRIMHQSGYNDGDPLS 708
Query: 344 PDDQSYVLDNVLNYHPDKALKIGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKS 165
DD+S+VLDN VN+H S+Q+SRCF++VSTD R EDFSY
Sbjct: 709 GDDESFVLDN--------------------VNRHGSFQDSRCFFVVSTDSRTEDFSY--- 745
Query: 164 LENFLKDKYPENAMSFISKYF 102
N +K+P A +FI KYF
Sbjct: 746 -WNMTFEKFPNVAETFIGKYF 765
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 242 bits (618), Expect = 4e-61
Identities = 171/534 (32%), Positives = 259/534 (48%), Gaps = 41/534 (7%)
Frame = -3
Query: 1550 NENSNKSNWETNSFESG------GSREWNGDQGWNSKNAT--AVTPKTDA----WPGWSS 1407
++NS+ W + + SG GS + +GWNS+N + A K D+ GW+S
Sbjct: 1500 SDNSHAKGWNSENISSGAGWSKAGSDNSSHAKGWNSENISSGAGWSKADSDNSHAKGWNS 1559
Query: 1406 DRVQTQANHSMEPSGVSPSSGGWN--NVESRKELSDDWNKRVEEAKATNTIKDDGKTQWG 1233
+ + + A S S S + G WN N+ S S + AK N+ W
Sbjct: 1560 ENISSGAGWSKAGSDNSHAKG-WNSENISSGAGWSKAGSDNSSHAKGWNSENISSGAGWS 1618
Query: 1232 QWKTSPDSDVKLLDEQLCQSKSGQMGAWSAWGTNKFPTQASHTEKSLESPRFGGWNDFES 1053
+ + S +S K + + S +G WS G++ + ++E R+ + +
Sbjct: 1619 K-EDSDNSHAKGWNSENISSGAG----WSKAGSDNSHAKGWNSENISSGARWSKADSDNT 1673
Query: 1052 HKKHTDAWDKRAEETKATGWSNKEGKTEWGQKRSYNSDTNKMGEQMNQHKSSMWSSSSVA 873
H K TD W+ ++ TK + G W ++S D Q + ++S W + S
Sbjct: 1674 HAKSTD-WNTTSDRTKTMTKNTWSG---WHGEKSEKEDILSTKSQQDLPRNSDWGAVSNR 1729
Query: 872 DETPSXXXXXXXXXXXXXKESLVTNIMEEQ--GSQSEKNWDSFGGKNWSENEVQGQWGTH 699
+ + + + ++ W S + W+++ +
Sbjct: 1730 ENNAERAYEFVSKDQPLPDQVSEPCDWDNKLTPQKAVSGWLSSNDEGWTKDANSSERKEP 1789
Query: 698 KDSAVESQEWDKEGSSVKS--------HAW----GTNVRLEQGKK------------PTA 591
DS V W+K SS S ++W G +E+ +
Sbjct: 1790 TDSPVVYNSWEKRTSSEISQNVESASFNSWLPRAGDGGEVEKPNEWVKKSGSFKKNHGET 1849
Query: 590 SHGWDTSNSEGWKLKKSYRGKSPGKLDDRNNWNAS-GIFTATRQRLDQFTSEEQDILSDV 414
S GW S+S WK+KK++ PGK NN N S +FT TRQRLD FTSEEQD LS +
Sbjct: 1850 SGGWG-SDSGDWKIKKNH----PGKFPRMNNDNTSVRLFTETRQRLDLFTSEEQDALSLI 1904
Query: 413 EPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDKALKIGSGVDYITVNKHSSY 234
EP M SIRRIMH+S DGDP+ P+DQS+++DNV NYHPDKA K+GSG+D++ +++HSS+
Sbjct: 1905 EPTMKSIRRIMHKSGYNDGDPIRPEDQSFIIDNVFNYHPDKAAKMGSGIDHLMISRHSSF 1964
Query: 233 QESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFISKYFRKGRTEGGHE 72
Q+SRC Y+VSTDGR EDFSYRK L N +K ++P+ A F+ KYFRK + G +
Sbjct: 1965 QDSRCLYVVSTDGRKEDFSYRKCLGNLIKSRFPDVADEFLDKYFRKPKPGGNQD 2018
Score = 154 bits (388), Expect = 2e-34
Identities = 155/529 (29%), Positives = 220/529 (41%), Gaps = 40/529 (7%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
+SIVASCSWGKHVAVGTG+ F ILW+T+++E Q G DV NFLH+V ++ G E TAC
Sbjct: 1207 TSIVASCSWGKHVAVGTGSRFDILWDTRKVEFNQAGGVDVNNFLHMV-STAYGEEASTAC 1265
Query: 1706 LGGEIDDIELDNGDLERSLSPEQNFDYVRPTFDDDVDVDEIQCNKEQNGTLYNENSNKSN 1527
LG EIDD+ + E LSPE NF+ RP F+ D+DE Q E+ + KS+
Sbjct: 1266 LGEEIDDLMPGDDIAELCLSPE-NFNSDRPVFE---DIDEFQDISEK------DLPGKSS 1315
Query: 1526 WET-NSFESGGSREWNGDQGWNSKNATAVTPKTDAWPGWSSDRVQTQANHSMEPSGVSPS 1350
W+ +SF SG S + W S N V K D W + + Q + PS P
Sbjct: 1316 WDNLSSFRSGSS----SGKEWGSNN--NVGTKYDVGSSWGTANKEEQ---EVIPSKGEPD 1366
Query: 1349 ---SGGWNNVES-RKEL---SDDWNKRVEEAKATNTIK-DDGKTQWGQWKTSPDSDVKLL 1194
S GW N S R EL DW +E + K + + W +P
Sbjct: 1367 NSWSNGWENKNSGRMELETMKSDWRGDADERHNPFSSKPQESSKRSDVWDATPGWGTNTA 1426
Query: 1193 DEQLCQS---KSGQMGAWSAWGTNKFPTQASHTE--KSLESPRFGGWNDFESHKKHTDAW 1029
E++ S S + + + W +K + SH + S GW+ S H W
Sbjct: 1427 SEKVSSSTGWNSENISSGAGW--SKADSDNSHAKGWNSENISSGAGWSKAGSDNSHAKGW 1484
Query: 1028 DKRAEETKATGWS-----NKEGKTEWGQKRSYNSDTNKMGEQMNQHKSSMWSSSSVADET 864
K + GWS N K + S + +K G + H W+S +++
Sbjct: 1485 -KSENISSGAGWSKADSDNSHAKGWNSENISSGAGWSKAGSDNSSHAKG-WNSENISSGA 1542
Query: 863 P-SXXXXXXXXXXXXXKESLVTNI-MEEQGSQSE--KNWDS---FGGKNWSE---NEVQG 714
S E++ + + GS + K W+S G WS+ +
Sbjct: 1543 GWSKADSDNSHAKGWNSENISSGAGWSKAGSDNSHAKGWNSENISSGAGWSKAGSDNSSH 1602
Query: 713 QWGTHKDSAVESQEWDKEGSSVKSHAWGTNVRLEQGKKPTASHGWDTSNSEGWKLKKSYR 534
G + ++ W KE S SHA G N + G D S+++GW +
Sbjct: 1603 AKGWNSENISSGAGWSKEDSD-NSHAKGWNSENISSGAGWSKAGSDNSHAKGWNSENISS 1661
Query: 533 GKSPGKLDDRNNWNASGIFTATRQRLDQFT-----------SEEQDILS 420
G K D N S + T R T SE++DILS
Sbjct: 1662 GARWSKADSDNTHAKSTDWNTTSDRTKTMTKNTWSGWHGEKSEKEDILS 1710
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 239 bits (611), Expect = 2e-60
Identities = 181/607 (29%), Positives = 276/607 (45%), Gaps = 113/607 (18%)
Frame = -3
Query: 1571 EQNGTLYNENSNKSNWETNSFESGGSREWN------------GDQGWNSKNATAVTPKTD 1428
+ NG + ++ +K + + S E GG W G+ GW + + + P +
Sbjct: 1271 DNNG--WKKSDSKKDLASGSVEDGGCSGWGPKKDLLQPEDSAGENGWGASKSKSKEPSS- 1327
Query: 1427 AW--PGWSSDRVQTQANHSMEPSGVSPSSGGWNNV----------ESRKELSDDW----- 1299
AW P +D + + N+ S + GWN+ +S+ S DW
Sbjct: 1328 AWGKPAQETDNIGWKKNNPQRDSENLEGTSGWNDKLQKENKSFSKQSQPASSKDWDSTGN 1387
Query: 1298 -------------NKRVEEAKATNTIKDDGKTQWGQ-----WKTSPDSDVKLLDEQ---- 1185
N++ + + ++K K+ WGQ WK + + D K D Q
Sbjct: 1388 ITAGSTGFGVEKGNEKPWDVASNVSVK---KSTWGQTGGNSWKKN-EQDEKDGDPQGLPW 1443
Query: 1184 -------------------LCQSKSGQMGAWSAWGTNKFPTQASHTEKSLESP--RFGGW 1068
+ Q S + G S+WG + +Q ++ E + S R G
Sbjct: 1444 GKSHKSSDSWTSGQGNQHPVSQGVSEKQGTLSSWGQPRDSSQKNNNENGVSSNFNRQGAG 1503
Query: 1067 NDFESHKKHTDAWDKRAEETKATGWSNKEGKTEWGQKRSYNSDTNKMGEQMNQHKSSMWS 888
++S KK ++ A++ +T +KE ++ S NS G+ + SS W
Sbjct: 1504 KSWDSKKKESNVQSSWAQQGDSTWKDSKEARSSVKANNSTNSGGWSTGKALVDGVSSSWG 1563
Query: 887 SSSVADETPSXXXXXXXXXXXXXKESLVTNIMEEQGSQSEKNWDSFGGKNWSENEVQGQ- 711
S P + K S+G + S+N Q
Sbjct: 1564 SQKEDRPQPKSNDRSVGDGNFDKDAKEEGLSSWDAKKVERKTQSSWGQPSESKNSAQSSA 1623
Query: 710 --WGTHKDSAV-ESQEWDKEGS-----SVKSHAWG-TNV---RLEQGKK----------- 600
WG+ K + +S W E + S K +WG +NV + E G+K
Sbjct: 1624 DHWGSDKSNQPGKSSGWGSEDTNAGKDSEKQDSWGKSNVSTWKKESGEKLHGSDDSQSPW 1683
Query: 599 ------------PTASHGWDTSNSEGWKLKKSYRGKSPGKLDDR-----NNWNASGIFTA 471
P GW +SN+ WK +K+ + ++ + +R N+ + TA
Sbjct: 1684 GQPGGSGWNKKQPEGGRGWGSSNTGEWKSRKN-QNQNQNQNQNRPPRGPNDDSPRVALTA 1742
Query: 470 TRQRLDQFTSEEQDILSDVEPIMHSIRRIMHQSRDKDGDPLAPDDQSYVLDNVLNYHPDK 291
TR+R+D+F +EE+D+LS+VE +M SIRRIMHQS DG+PL PDDQ+Y++DN+LNYHPDK
Sbjct: 1743 TRKRMDEFPTEEKDVLSEVESLMQSIRRIMHQSGCVDGEPLLPDDQTYLIDNILNYHPDK 1802
Query: 290 ALKIGSGVDYITVNKHSSYQESRCFYIVSTDGRHEDFSYRKSLENFLKDKYPENAMSFIS 111
A KIG+GVD+ITV KHS++QESRCFY+VSTDG+ DFSY K +E F+K KYP A SF S
Sbjct: 1803 AAKIGAGVDFITVKKHSNFQESRCFYVVSTDGKDTDFSYIKCIETFVKGKYPSVAESFTS 1862
Query: 110 KYFRKGR 90
KYFR+ +
Sbjct: 1863 KYFRRSQ 1869
Score = 130 bits (328), Expect = 2e-27
Identities = 144/533 (27%), Positives = 210/533 (39%), Gaps = 65/533 (12%)
Frame = -3
Query: 1886 SSIVASCSWGKHVAVGTGAPFQILWNTKEIESKQDGVKDVFNFLHLVRMSSSGREFDTAC 1707
+SIV SCSWGK V++GTGA F +LW TKEIE D DV+NFLHLV S++ E D+
Sbjct: 1008 ASIVGSCSWGKRVSIGTGAKFDLLWETKEIE-MADKPTDVYNFLHLV-SSANEEEVDSGG 1065
Query: 1706 LGGEIDDIELDNGDLERSLSPEQ-NFDYVRPTFDDDVDVDEIQCNKE------QNGTLYN 1548
LG +I+ E D +E +LSPEQ N T + VD D ++ +GT +N
Sbjct: 1066 LGEDIESFEKD-VYMEPALSPEQENKAVFEETLEIGVDSDITGADESSWDAFPSSGTGWN 1124
Query: 1547 EN-------SNKSNW----------------ETNSFESGGSRE------------WNGDQ 1473
N S + W +T + SGGS++ W+ +
Sbjct: 1125 ANKIDTGSGSAEGGWSSWGSKKDQANPEDSSKTGGWSSGGSKQKPQPEDSSKSGGWDASK 1184
Query: 1472 GWNSKNATAVTPKTDAW--PGWSSDRVQTQANHSMEPSGVSPSSGGWNNVESRKELSDDW 1299
W N +P W P +++ + + +H SG S GGW N +K+LS
Sbjct: 1185 SWGGSNQGDPSP---VWGQPVKATNDISIENDHG---SG-SAEGGGWANSGMKKDLSKQE 1237
Query: 1298 NKRV----EEAKATNTIK-DDGKTQWGQWKTSPDSD--VKLLDEQLCQSKSGQMGAWSAW 1140
N + +K+ + K D + WG K + D++ K ++ S S + G S W
Sbjct: 1238 NSSTAGGWDASKSWSGSKPKDPSSAWGAGKKTDDNNGWKKSDSKKDLASGSVEDGGCSGW 1297
Query: 1139 GTNKFPTQASHTEKSLESPRFGGWNDFESHKKH-TDAWDKRAEETKATGW---------S 990
G K Q +S GW +S K + AW K A+ET GW
Sbjct: 1298 GPKKDLLQPE------DSAGENGWGASKSKSKEPSSAWGKPAQETDNIGWKKNNPQRDSE 1351
Query: 989 NKEGKTEWGQKRSYNSDTNKMGEQMNQHKSSMWSSSSVADETPSXXXXXXXXXXXXXKES 810
N EG + W K + +Q S W S+ + S
Sbjct: 1352 NLEGTSGWNDK--LQKENKSFSKQSQPASSKDWDSTGNITAGSTGFGVEKGNEKPWDVAS 1409
Query: 809 LVTNIMEEQGSQSEKNWDSFGGKNWSENEVQGQWGTHKDSAVESQEWDKEGSSVKSHAWG 630
V S + W GG +W +NE KD + W K S S +W
Sbjct: 1410 NV--------SVKKSTWGQTGGNSWKKNEQD-----EKDGDPQGLPWGKSHKS--SDSWT 1454
Query: 629 TNVRLEQGKKPTASHGWDTSNSEG----WKLKKSYRGKSPGKLDDRNNWNASG 483
+ QG + S G S +G W + K+ + +N+N G
Sbjct: 1455 SG----QGNQHPVSQG--VSEKQGTLSSWGQPRDSSQKNNNENGVSSNFNRQG 1501