BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00015596
         (4099 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1793   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1755   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1746   0.0  
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...  1735   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1732   0.0  
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...  1714   0.0  
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...  1710   0.0  
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...  1709   0.0  
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...  1694   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...  1689   0.0  
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...  1689   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1687   0.0  
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...  1644   0.0  
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...  1641   0.0  
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...  1638   0.0  
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...  1621   0.0  
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr...  1606   0.0  
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...  1563   0.0  
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana...  1560   0.0  
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps...  1548   0.0  

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1793 bits (4643), Expect = 0.0
 Identities = 885/1165 (75%), Positives = 1003/1165 (86%), Gaps = 1/1165 (0%)
 Frame = +3

Query: 144  DYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFGDHELFPPQKD 323
            DY+ LR+LF+ HI+SFD+LVE GL TLL ++ P                           
Sbjct: 7    DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKP--------------------------- 39

Query: 324  RGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSLPIMLKSKACHL 503
            R  +T R ALYP ECRQA  +Y+GK L ++CFQY N   IRE+ + G  PIMLKSK CHL
Sbjct: 40   RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCHL 99

Query: 504  RGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTFRERQEGFTDK 683
            RGADP +L+S KEES+EMGGYFILNGLER+VRLLI+ KRN+PMS++R++FR+R+EG+TDK
Sbjct: 100  RGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDK 159

Query: 684  AVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALIDTNDLEIYASL 863
            AV IRCVR+DQS+V+ +LYYL+NGSAR GFWI+G+E+LLPVGVVLKALIDT D EIY SL
Sbjct: 160  AVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESL 219

Query: 864  TCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEYFQPVMVGLENK 1043
            TC Y+E+Y+GGKGAVGTQLVGERV+IILDEVRDLSL T  QCLQHIGE+FQ VM GLEN+
Sbjct: 220  TCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENE 279

Query: 1044 SHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLDALQNQEVLLPG 1223
            S+S V  +VL++YIFVHL NN DKFNLLIFMVQKLF+L+D T+ PDN D LQNQEVLLPG
Sbjct: 280  SYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPG 339

Query: 1224 HLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNPSRNVGTAIENM 1403
            HLITIYLK+KLQEWLYKARRLLQDE+ K+ K+F+F SLAHVKKV+DKNPSR +  A+ENM
Sbjct: 340  HLITIYLKEKLQEWLYKARRLLQDEINKR-KNFEFSSLAHVKKVMDKNPSRQISLAVENM 398

Query: 1404 LKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQRNTSVRKLLPEA 1583
            LKTGRL+TQSGLDLQQ  GMTV AERLNFLRF+SHFR+VHRGASFAG R TSVRKLLPEA
Sbjct: 399  LKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEA 458

Query: 1584 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILSVLTGIGMTPSL 1763
            WGFLCPVHTPDGEPCGLLNHM STCRITS+FDS+GN ++ FKIR+SILSVL GIGMTP+L
Sbjct: 459  WGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPAL 518

Query: 1764 PKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPEDLEVGYVPLSF 1943
            PKLV+AGPPE LSV+LDG V+GS+ S+ VE AV+HLRRLK+   S IP+DLEVGY+PLS 
Sbjct: 519  PKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSM 578

Query: 1944 GGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCPDGGNGGRRDGF 2123
            GGAYPGLYLFTSPSRF+RPVRNIS+P++E  +IELIGPFEQ YMEIRCPDG +GGRR+ F
Sbjct: 579  GGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIF 638

Query: 2124 PATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYHL 2303
            PATHEEIHPTG+ SVVA+LTP+SDHNQSPRNMYQCQM KQTMAFSSQAI  RADQKLYHL
Sbjct: 639  PATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHL 698

Query: 2304 QTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGTIY 2483
            QTPQTPIVRT+AY KY +DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RG+ HG IY
Sbjct: 699  QTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIY 758

Query: 2484 QVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPNEPYCSIYNTVN 2663
            Q ETIDL ++   SD+ QR+F RSN+DK+ +S ID+DGLPYVGQM+ PNEPYCSIYN V 
Sbjct: 759  QTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVT 818

Query: 2664 SSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKFSSRHGQKGVCS 2843
            SST+   LKGSEPVIVDYV++DA+N KK PQKVNIRFRRPRNP+IGDKFSSRHGQKGVCS
Sbjct: 819  SSTRATKLKGSEPVIVDYVALDAKN-KKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCS 877

Query: 2844 QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFPGA 3023
            QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GKFVDATPF  +
Sbjct: 878  QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDS 937

Query: 3024 VLKAD-EESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTCEIFIGPVYYQRLR 3200
            + KA+ E  S S S VDELG +L SYGFNYHG EVLYSG  GTELTCEIFIGPVYYQRLR
Sbjct: 938  LRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLR 997

Query: 3201 HMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSD 3380
            HMVSDKFQVRSTGTVDQVTRQP           FGEMERDSMLAHGAAYLLHDRLHTCSD
Sbjct: 998  HMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSD 1057

Query: 3381 HHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKTSKGMETVAMPYV 3560
            HHIADVCSLCGSILT +IIQP K+AVREIGGLPPG  PKKV CHAC+TSKGMETV+MPY+
Sbjct: 1058 HHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYI 1117

Query: 3561 FKYLAAELAAMNVKMTLRLSNGAEA 3635
            F++LAAELAAMN+KMTL+LSNGA A
Sbjct: 1118 FRFLAAELAAMNIKMTLQLSNGAGA 1142


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1755 bits (4545), Expect = 0.0
 Identities = 849/1164 (72%), Positives = 995/1164 (85%), Gaps = 2/1164 (0%)
 Frame = +3

Query: 144  DYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFGDHELFPPQKD 323
            DY++LR+LF+ HIESFD+LV+AGL TL+++I PVEIYD  + K LRI  G  EL+PPQK+
Sbjct: 10   DYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQKE 69

Query: 324  RGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSLPIMLKSKACHL 503
            R  +T R AL P ECRQA  +Y GKF+ ++CFQY+    IRE+ +FG  PIMLKSK CHL
Sbjct: 70   RNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKLCHL 129

Query: 504  RGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTFRERQEGFTDK 683
            RG DP +L+SY EE++EMGGYF++NGLER+VRLLI  KRN+P S++R++F +R+EG+TDK
Sbjct: 130  RGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGYTDK 189

Query: 684  AVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALIDTNDLEIYASL 863
            AV IRCVR+DQSSV+ +LYYL+NGSAR GFW++GKE+LLP+GVVLKALIDT D EIYASL
Sbjct: 190  AVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASL 249

Query: 864  TCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEYFQPVMVGLENK 1043
            T  Y++++   KGAVGTQLVGER +IILDEVRDL+L  H QCL HIG++FQPVM GL  +
Sbjct: 250  TSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKE 309

Query: 1044 SHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLDALQNQEVLLPG 1223
              S V  +VLKDYIFVHL NN DKFNLLIFM QKLF+L+D T+ PDN D+LQNQ+VLLPG
Sbjct: 310  KFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVLLPG 369

Query: 1224 HLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNPSRNVGTAIENM 1403
             LIT+YLK+KL++WL K ++LL+DE+    K+F+F SLAHVKKV+DKNPS+ V +A+ENM
Sbjct: 370  QLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAVENM 429

Query: 1404 LKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQRNTSVRKLLPEA 1583
            LKTGRL+TQ+GLDLQQ  G TV AERLNFLRF+SHFR+VHRGASFAG R T+VRKLLPE+
Sbjct: 430  LKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 1584 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILSVLTGIGMTPSL 1763
            WGFLCPVHTPDGEPCGLLNH+TSTCRITS F+SQG V++ +KIR SILSVL  +GM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIPSL 549

Query: 1764 PKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPEDLEVGYVPLSF 1943
            PKLV+ G P+ L+VLLDG ++G +SS  VEK V+HLRRLK+     IP+DLEVGYVPLS 
Sbjct: 550  PKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSI 609

Query: 1944 GGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCPDGGNGGRRDGF 2123
             GAYPGLYLFTSPSRF+RPV+N+S+  +++ NIELIGPFEQ +MEIRCPDGG+GGR+D F
Sbjct: 610  SGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRKDEF 669

Query: 2124 PATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYHL 2303
            PATHEEIHPTG+ SVVANLTP+SDHNQSPRNMYQCQMAKQTMAFS QAI++RADQKLYHL
Sbjct: 670  PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHL 729

Query: 2304 QTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGTIY 2483
            QTPQTPIVRT+ YTKY+IDE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHG IY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 2484 QVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPNEPYCSIYNTVN 2663
            Q ETIDL +Q   S ++Q++F RSNID ++ S IDADGLPYVGQM++P+EPYCSIY+ V 
Sbjct: 790  QTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVA 849

Query: 2664 SSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKFSSRHGQKGVCS 2843
             +T+   LKGSE VIVDYVSVD +N K  PQKVNIRFRRPRNP+IGDKFSSRHGQKGVCS
Sbjct: 850  GTTRTMKLKGSEAVIVDYVSVDVKN-KNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCS 908

Query: 2844 QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFPGA 3023
            QLWPD+DMPF G TGMRPDLIINPHAFPSRMTI ML+ES+AAKGG LNG+FV+ATPF  +
Sbjct: 909  QLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSS 968

Query: 3024 VLK--ADEESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTCEIFIGPVYYQRL 3197
            V K  A +E +  ++ VDELG  L   GFNYHG EVLYSGV GTELTCEIFIGPVYYQRL
Sbjct: 969  VNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1028

Query: 3198 RHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCS 3377
            RHMVSDK+QVRSTGTVDQVTRQP           FGEMERDSMLAHGA+YLLHDRLHTCS
Sbjct: 1029 RHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCS 1088

Query: 3378 DHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKTSKGMETVAMPY 3557
            DHHIADVCSLCGS+LT++ +QPPK+AVREIGGLPPG  PK+V CHACKTSKGMETVAMPY
Sbjct: 1089 DHHIADVCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPY 1148

Query: 3558 VFKYLAAELAAMNVKMTLRLSNGA 3629
            VFKYLAAELAAMN+KMTL+LS+GA
Sbjct: 1149 VFKYLAAELAAMNIKMTLQLSSGA 1172


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score = 1746 bits (4523), Expect = 0.0
 Identities = 856/1168 (73%), Positives = 988/1168 (84%), Gaps = 1/1168 (0%)
 Frame = +3

Query: 129  PQSQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFGDHELF 308
            P S  D+++LR+LFK HIESFDY+V+AGL T+L +I PVE++D  +   LRI   +  L+
Sbjct: 5    PGSVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLY 64

Query: 309  PPQKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSLPIMLKS 488
            PPQK+R  +T R AL P ECRQA  +Y+GK  +++CFQY +   IRE V+FG  PIML+S
Sbjct: 65   PPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQS 124

Query: 489  KACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTFRERQE 668
            K C+LRGADP +L+SYKEE++EMGGYFILNGLER+VRLLI+ KRN+PMS++R++F +R+E
Sbjct: 125  KLCNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRRE 184

Query: 669  GFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALIDTNDLE 848
            G+TDKAV IRCVR DQSS+S RLYYL+NGSAR GFW+RG+E+LLPVG++LKALIDT D E
Sbjct: 185  GYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDRE 244

Query: 849  IYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEYFQPVMV 1028
            IY +LT  YNE+Y+ GKGAVGTQLVGER +IILDE+RDLSL T LQCL++IGE+FQPVM 
Sbjct: 245  IYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMN 304

Query: 1029 GLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLDALQNQE 1208
             L+N S+  V  +VLKD I VHL NN DKFNLLIFM+QKLF+L+D T+ PDN D+LQN E
Sbjct: 305  ELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHE 364

Query: 1209 VLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNPSRNVGT 1388
            VLLPGHLIT+YLK+KL++WL K RRLL DE+ KK K FDF  +  VKKV+DKN  + V T
Sbjct: 365  VLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVST 424

Query: 1389 AIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQRNTSVRK 1568
            A+ENMLKTGRL+TQ+GLDLQQ  G TV AERLNFLRF+SHFR+VHRGASFAG R T+VRK
Sbjct: 425  AVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRK 484

Query: 1569 LLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILSVLTGIG 1748
            LLPE+WGFLCPVHTPDGEPCGLLNHMT T RITSFFDSQGN+K+ FKI++SIL+VL  +G
Sbjct: 485  LLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVG 544

Query: 1749 MTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPEDLEVGY 1928
            MTPSLPK+   GPPEAL+VLLDGCV+G ++S+ VEK V+H+R LK+   + IP+D+EVGY
Sbjct: 545  MTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGY 604

Query: 1929 VPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCPDGGNGG 2108
            VPLS GGAYPGLYL TSPSRF+RPVRNIS+ +D S NIELIGPFEQ +MEIRCPDGG+GG
Sbjct: 605  VPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGG 664

Query: 2109 RRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQ 2288
            R+  FPATHEEIHPT + SVVANLTP+SDHNQSPRNMYQCQMAKQTMAFSSQ IQ RADQ
Sbjct: 665  RKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQ 724

Query: 2289 KLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMF 2468
            KLYHLQTPQTPIVRT+ YTKY+IDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMF
Sbjct: 725  KLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMF 784

Query: 2469 HGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPNEPYCSI 2648
            HG IYQ ETIDL EQ   SD++ R+F +SNI+K+   SID+DGLP+VGQM+RP+EPYCSI
Sbjct: 785  HGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSI 844

Query: 2649 YNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKFSSRHGQ 2828
            YN V SS      KGSE V VDYV+ D +N KK  QKVNIRFR PRNPVIGDKFSSRHGQ
Sbjct: 845  YNEVTSSIHTLKRKGSEAVYVDYVAADVKN-KKHLQKVNIRFRHPRNPVIGDKFSSRHGQ 903

Query: 2829 KGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDAT 3008
            KGVCSQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDAT
Sbjct: 904  KGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDAT 963

Query: 3009 PFPGAVLK-ADEESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTCEIFIGPVY 3185
            PF  +V K + E  S S S VD+LG LL   GFNYHG EVLYSGV GTELTCEIFIGPVY
Sbjct: 964  PFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVY 1023

Query: 3186 YQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRL 3365
            YQRLRHMVSDKFQVRSTGT+DQVTRQP           FGEMERDS+LAHGAAYLLHDRL
Sbjct: 1024 YQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRL 1083

Query: 3366 HTCSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKTSKGMETV 3545
            HTCSD+HIADVCSLCGS+L  T IQP K+ VREIGGLPPG  PKKV CHAC+TSKGMETV
Sbjct: 1084 HTCSDYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETV 1143

Query: 3546 AMPYVFKYLAAELAAMNVKMTLRLSNGA 3629
            AMPYVF+YLAAELAAMN+KMTL+LS+GA
Sbjct: 1144 AMPYVFRYLAAELAAMNIKMTLKLSDGA 1171


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score = 1735 bits (4494), Expect = 0.0
 Identities = 846/1165 (72%), Positives = 985/1165 (84%), Gaps = 1/1165 (0%)
 Frame = +3

Query: 144  DYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFGDHELFPPQKD 323
            D+++LR+LFK HIESFDY+ +AGL T+L +I P+E++D  +   LRI   +  L+PPQK+
Sbjct: 10   DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 324  RGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSLPIMLKSKACHL 503
            R  +T R AL P ECRQA  +YAGK  +++CFQY +   IRE ++FG  PIML+SK C+L
Sbjct: 70   RISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCNL 129

Query: 504  RGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTFRERQEGFTDK 683
            RGADP +L+SY+EE++EMGGYFILNGLER++RLLI+ KRN PMS++R++F +R+EG+TDK
Sbjct: 130  RGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTDK 189

Query: 684  AVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALIDTNDLEIYASL 863
            A+ IRCVR DQSS+S RLYYL+NGSAR GFW+RG+E+LLPVG++LKALIDT D EIY +L
Sbjct: 190  AIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNL 249

Query: 864  TCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEYFQPVMVGLENK 1043
            T  YNE+Y+ GKGAVGTQLVGER +IILDE+RDLSL T LQCL++IGE+FQPV+  L+N 
Sbjct: 250  TSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKND 309

Query: 1044 SHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLDALQNQEVLLPG 1223
            S+  V  +VLKD I VHL NN DKFNLLIFM+QKLF+L+D T+ PDN D+LQN EVLLPG
Sbjct: 310  SYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 1224 HLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNPSRNVGTAIENM 1403
            HLIT+YLK+KL++WL K +RLL DE+ KK K FDF  +  VKKV+DKN  + V TA+ENM
Sbjct: 370  HLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM 429

Query: 1404 LKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQRNTSVRKLLPEA 1583
            LKTGRL+TQ+GLDLQQ  G TV AERLNFLRF+SHFR+VHRGASFAG R T+VRKLLPE+
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 1584 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILSVLTGIGMTPSL 1763
            WGFLCPVHTPDGEPCGLLNHMT T RITSFFDSQGNVK+ FKI++SIL+VL  +GMTPSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPSL 549

Query: 1764 PKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPEDLEVGYVPLSF 1943
            PK+   GPPEAL+VLLDGCV+G ++S+  EK V+H+R LK+   + IP+D+EVGYVPLS 
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLSM 609

Query: 1944 GGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCPDGGNGGRRDGF 2123
            GGAYPGLYL TSPSRF+RPVRNIS+P++ S NIE IGPFEQ +MEIRCPDGG+GGR+  F
Sbjct: 610  GGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSSF 669

Query: 2124 PATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYHL 2303
            PATHEEIHPT + SVVANLTP+SDHNQSPRNMYQCQMAKQTMAFSSQ IQ RADQKLYHL
Sbjct: 670  PATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHL 729

Query: 2304 QTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGTIY 2483
            QTPQTPIVRT+ YTKY+IDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHG IY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 2484 QVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPNEPYCSIYNTVN 2663
            Q ETIDL EQ    D++ R+F +SN++K+   SID+DGLP+VGQM+RP+EPYCSIYN V 
Sbjct: 790  QTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVT 849

Query: 2664 SSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKFSSRHGQKGVCS 2843
            SS      KGSE V VDYV+VD +N KK  QKVNIRFR PRNPVIGDKFSSRHGQKGVCS
Sbjct: 850  SSIHTLKRKGSEAVYVDYVAVDVKN-KKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCS 908

Query: 2844 QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFPGA 3023
            QLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF  +
Sbjct: 909  QLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSS 968

Query: 3024 VLK-ADEESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTCEIFIGPVYYQRLR 3200
            V K + E  S+S S VD+LG LL   GFNYHG EVLYSGV GTELTCEIFIGPVYYQRLR
Sbjct: 969  VKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLR 1028

Query: 3201 HMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSD 3380
            HMVSDKFQVRSTGT+DQVTRQP           FGEMERDS+LAHGAAYLLHDRLHTCSD
Sbjct: 1029 HMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSD 1088

Query: 3381 HHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKTSKGMETVAMPYV 3560
            +HIADVCSLCGS+LT T  QP K+ VREIGGLPPG  PKKV CHAC+TSKGMETVAMPYV
Sbjct: 1089 YHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYV 1148

Query: 3561 FKYLAAELAAMNVKMTLRLSNGAEA 3635
            F+YLAAELAAMN+KMTL+LS+GA A
Sbjct: 1149 FRYLAAELAAMNIKMTLKLSDGAGA 1173


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1732 bits (4485), Expect = 0.0
 Identities = 855/1117 (76%), Positives = 967/1117 (86%), Gaps = 1/1117 (0%)
 Frame = +3

Query: 288  FGDHELFPPQKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGS 467
            FG  EL+PPQK+R  +T R ALYP ECRQA  +Y+GK L ++CFQY N   IRE+ + G 
Sbjct: 21   FGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQ 80

Query: 468  LPIMLKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRH 647
             PIMLKSK CHLRGADP +L+S KEES+EMGGYFILNGLER+VRLLI+ KRN+PMS++R+
Sbjct: 81   FPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRN 140

Query: 648  TFRERQEGFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKAL 827
            +FR+R+EG+TDKAV IRCVR+DQS+V+ +LYYL+NGSAR GFWI+G+E+LLPVGVVLKAL
Sbjct: 141  SFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKAL 200

Query: 828  IDTNDLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGE 1007
            IDT D EIY SLTC Y+E+Y+GGKGAVGTQLVGERV+IILDEVRDLSL T  QCLQHIGE
Sbjct: 201  IDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGE 260

Query: 1008 YFQPVMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNL 1187
            +FQ VM GLEN+S+S V  +VL++YIFVHL NN DKFNLLIFMVQKLF+L+D T+ PDN 
Sbjct: 261  HFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNP 320

Query: 1188 DALQNQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKN 1367
            D LQNQEVLLPGHLITIYLK+KLQEWLYKARRLLQDE+ K+ K+F+F SLAHVKKV+DKN
Sbjct: 321  DVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKR-KNFEFSSLAHVKKVMDKN 379

Query: 1368 PSRNVGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQ 1547
            PSR +  A+ENMLKTGRL+TQSGLDLQQ  GMTV AERLNFLRF+SHFR+VHRGASFAG 
Sbjct: 380  PSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGL 439

Query: 1548 RNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSIL 1727
            R TSVRKLLPEAWGFLCPVHTPDGEPCGLLNHM STCRITS+FDS+GN ++ FKIR+SIL
Sbjct: 440  RTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSIL 499

Query: 1728 SVLTGIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIP 1907
            SVL GIGMTP+LPKLV+AGPPE LSV+LDG V+GS+ S+ VE AV+HLRRLK+   S IP
Sbjct: 500  SVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIP 559

Query: 1908 EDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRC 2087
            +DLEVGY+PLS GGAYPGLYLFTSPSRF+RPVRNIS+P++E  +IELIGPFEQ YMEIRC
Sbjct: 560  DDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRC 619

Query: 2088 PDGGNGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQA 2267
            PDG +GGRR+ FPATHEEIHPTG+ SVVA+LTP+SDHNQSPRNMYQCQM KQTMAFSSQA
Sbjct: 620  PDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQA 679

Query: 2268 IQFRADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKS 2447
            I  RADQKLYHLQTPQTPIVRT+AY KY +DEFPTGTNAIVAVLAY+GYDMEDAMILNKS
Sbjct: 680  INCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKS 739

Query: 2448 SVERGMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRP 2627
            SV+RG+ HG IYQ ETIDL ++   SD+ QR+F RSN+DK+ +S ID+DGLPYVGQM+ P
Sbjct: 740  SVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINP 799

Query: 2628 NEPYCSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDK 2807
            NEPYCSIYN V SST+   LKGSEPVIVDYV++DA+N KK PQKVNIRFRRPRNP+IGDK
Sbjct: 800  NEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKN-KKHPQKVNIRFRRPRNPIIGDK 858

Query: 2808 FSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLN 2987
            FSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+
Sbjct: 859  FSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLH 918

Query: 2988 GKFVDATPFPGAVLKAD-EESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTCE 3164
            GKFVDATPF  ++ KA+ E  S S S VDELG +L SYGFNYHG EVLYSG  GTELTCE
Sbjct: 919  GKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCE 978

Query: 3165 IFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAA 3344
            IFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQP           FGEMERDSMLAHGAA
Sbjct: 979  IFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAA 1038

Query: 3345 YLLHDRLHTCSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKT 3524
            YLLHDRLHTCSDHHIADVCSLCGSILT +IIQP K+A                      T
Sbjct: 1039 YLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRA----------------------T 1076

Query: 3525 SKGMETVAMPYVFKYLAAELAAMNVKMTLRLSNGAEA 3635
            SKGMETV+MPY+F++LAAELAAMN+KMTL+LSNGA A
Sbjct: 1077 SKGMETVSMPYIFRFLAAELAAMNIKMTLQLSNGAGA 1113


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score = 1714 bits (4438), Expect = 0.0
 Identities = 833/1165 (71%), Positives = 978/1165 (83%), Gaps = 1/1165 (0%)
 Frame = +3

Query: 141  SDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFGDHELFPPQK 320
            +++D+LRDL KPHIESFD++++AGL T+   I P+E+  P    TL+IS  + ++F PQK
Sbjct: 15   ANFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIFEPQK 74

Query: 321  DRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSLPIMLKSKACH 500
            +RG    R+ LYP ECRQA  +Y G F  ELCFQY+N   +RE+ +FG  PIML+SK C+
Sbjct: 75   ERGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPIVREKFNFGQFPIMLQSKLCN 134

Query: 501  LRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTFRERQEGFTD 680
            LRGA P +L+SYKEE++E+GGYFILNGLER++RLLIM KRN+PMS +R +F ER+EG+TD
Sbjct: 135  LRGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERREGYTD 194

Query: 681  KAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALIDTNDLEIYAS 860
            KAV IRCVR DQ+SVS +LYYL+NGSAR GFWI G+E++LPVG+VLKALIDT D EIY +
Sbjct: 195  KAVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDREIYVN 254

Query: 861  LTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEYFQPVMVGLEN 1040
            LT  YNE+Y+ GKGAVGTQLVGER +IILDEVRDLSL T LQCLQ+IGE+FQP++ GL+N
Sbjct: 255  LTSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPILQGLKN 314

Query: 1041 KSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLDALQNQEVLLP 1220
            +SH  V  +VL+DYI VHL NN DKFNLLIFM+QKLF+L+D T+ PDN D+LQNQEVLLP
Sbjct: 315  ESHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQEVLLP 374

Query: 1221 GHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNPSRNVGTAIEN 1400
            GHLIT+YLK+KL+EWL K +RLL DE++KKG +F+F  +A VKKVL+KN ++ + TAIEN
Sbjct: 375  GHLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGISTAIEN 434

Query: 1401 MLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQRNTSVRKLLPE 1580
            MLKTGRL+T +GLDL Q  G TV AER+NFLRFISHFR+VHRG+SFAG R T+VRKLLPE
Sbjct: 435  MLKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVRKLLPE 494

Query: 1581 AWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILSVLTGIGMTPS 1760
            +WGFLCPVHTPDGEPCGLLNHMT TCR+TSF+DS+GN+K+ FKI+LSIL++L  IGMT S
Sbjct: 495  SWGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEIGMTQS 554

Query: 1761 LPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPEDLEVGYVPLS 1940
            LPK+   GPPE L+VLLDGC++G + ST VEK V+H+R LK+   + IP D+EVGYVPLS
Sbjct: 555  LPKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVIPNDMEVGYVPLS 614

Query: 1941 FGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCPDGGNGGRRDG 2120
             GGAYPGLYLFTSPSRF+RPVRN+S+P+    N+ELIGPFEQ +MEIRCPDGG+GGR+  
Sbjct: 615  MGGAYPGLYLFTSPSRFVRPVRNLSIPSTNE-NVELIGPFEQVFMEIRCPDGGDGGRKSP 673

Query: 2121 FPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 2300
            FPATHEEIHPTG+ SVV NLTP+SDHNQSPRNMYQCQMAKQTM FSSQ IQ RADQKLYH
Sbjct: 674  FPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQTIQHRADQKLYH 733

Query: 2301 LQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGTI 2480
            LQTPQTPIVRT AY++Y IDE+P+GTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHG I
Sbjct: 734  LQTPQTPIVRTRAYSEYSIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 793

Query: 2481 YQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPNEPYCSIYNTV 2660
            YQ ETIDL E+   SDQ+ R+F +S +DK    SID+DGLP+VGQM+ P+EPYCS YN V
Sbjct: 794  YQTETIDLTEKGGKSDQSARVFRKSKLDKPC-PSIDSDGLPHVGQMIWPDEPYCSTYNEV 852

Query: 2661 NSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKFSSRHGQKGVC 2840
             + T  F  KGSEPV VDYV+VD +  KK   KVNIRFR PRNPVIGDKFSSRHGQKGVC
Sbjct: 853  TNKTYLFKKKGSEPVYVDYVAVDTKT-KKNLNKVNIRFRHPRNPVIGDKFSSRHGQKGVC 911

Query: 2841 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFPG 3020
            SQLWPDIDMPFSG TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GKF DATPF  
Sbjct: 912  SQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDATPFRS 971

Query: 3021 AVLKADEES-SLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTCEIFIGPVYYQRL 3197
            +V K DEES S S S VDELG +L   GFNYHG EVLYSGV GTELTCEIFIGPVYYQRL
Sbjct: 972  SVKKDDEESGSKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYYQRL 1031

Query: 3198 RHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCS 3377
            RHMVSDK+QVRSTGT+DQVTRQP           FGEMERDS+LAHGAAYLLHDRLHTCS
Sbjct: 1032 RHMVSDKYQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1091

Query: 3378 DHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKTSKGMETVAMPY 3557
            D+HIADVCS+CGS+LT T  QP K+ VREIGGLPP   P+KV CHAC++SKGME VAMPY
Sbjct: 1092 DYHIADVCSICGSMLTTTFQQPRKRPVREIGGLPPARAPRKVTCHACQSSKGMEKVAMPY 1151

Query: 3558 VFKYLAAELAAMNVKMTLRLSNGAE 3632
            +F+YLAAELAAMN+KMTL+L++G +
Sbjct: 1152 IFRYLAAELAAMNIKMTLKLTDGVD 1176


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score = 1710 bits (4428), Expect = 0.0
 Identities = 821/1174 (69%), Positives = 989/1174 (84%), Gaps = 4/1174 (0%)
 Frame = +3

Query: 126  APQSQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFGDHEL 305
            A +  +D++ LR+L + HIESFDY+++ GL+ +  ++  V ++D  + K L+IS G+ E+
Sbjct: 2    ARKKSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEI 61

Query: 306  FPPQKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQY--ENNFPIRERVSFGSLPIM 479
            FPPQK++G KT R AL P ECRQA  +Y GK + ++ FQY    +  +RER +FG  P+M
Sbjct: 62   FPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPVM 121

Query: 480  LKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTFRE 659
            LK++ CHL+GAD  +L+S KEE+ EMGGYFILNGLER+ R +I+ K+N+PMS++R +FR+
Sbjct: 122  LKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFRD 181

Query: 660  RQEGFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALIDTN 839
            R+EG+TDKAV IRCVR DQSSV+ +LYYL NGS R GFW++GKE+LLPVG+VLKAL+DTN
Sbjct: 182  RREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDTN 241

Query: 840  DLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEYFQP 1019
            DLEI+  LTC Y+E+Y+  KGAVG+ LV ERV+IIL EV+DLSL+T LQCLQHIGE+FQP
Sbjct: 242  DLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQP 301

Query: 1020 VMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLDALQ 1199
            V+ GL+++S+  V  +V++DYIFVHL +N+DKFNLLIFM+QKLF+LVDHT+  DN D+LQ
Sbjct: 302  VIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSLQ 361

Query: 1200 NQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNPSRN 1379
            NQE+LLPGHLITIYLK+KL++WL K ++L+QDE++  GK FDFF+LA++KKV++KNPS+ 
Sbjct: 362  NQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSKQ 421

Query: 1380 VGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQRNTS 1559
            +GT+IE MLKTGRL TQ+GLDLQQ  G TV AERLNFLRFIS FR+VHRGASFAG R TS
Sbjct: 422  IGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTTS 481

Query: 1560 VRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILSVLT 1739
            VRKLLPE+WGFLCPVHTPDGEPCGLLNHMTSTCR+ S++DS+GN+++  K+R SIL VL 
Sbjct: 482  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVLI 541

Query: 1740 GIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPEDLE 1919
            G+GM PSLPKLV++GPP  LSVLLDG V+G + S+ +EK V+HLRRLK+   S IP+DLE
Sbjct: 542  GVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDLE 601

Query: 1920 VGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCPDGG 2099
            VGYVPLS GGAYPGLYLFTSP +F+RPVRNIS+P++ES NIELIGPFEQ +MEIRCPDGG
Sbjct: 602  VGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDGG 661

Query: 2100 NGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAIQFR 2279
            +GGRR+ FPATHEEIHPTG+ SVVANLTP+SDHNQSPRNMYQCQMAKQTM FS QA++FR
Sbjct: 662  DGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKFR 721

Query: 2280 ADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 2459
            ADQKLYHLQTPQTPIVRT  YTKY IDE+PTGTNAIVAVLAYTGYDMEDAMILNKSSV+R
Sbjct: 722  ADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVDR 781

Query: 2460 GMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPNEPY 2639
            GM HG IYQ ETIDL +     D+ Q+LF R+   K++HS ID+DGLPYVGQM+ P EPY
Sbjct: 782  GMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLPYVGQMIHPGEPY 841

Query: 2640 CSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKFSSR 2819
            CSIY+   +S +  + KGSE V VDYV+VD +N K  PQK NIRFR  RNP+IGDKFSSR
Sbjct: 842  CSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSSR 901

Query: 2820 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFV 2999
            HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GKF+
Sbjct: 902  HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFM 961

Query: 3000 DATPFPGAVLKADEESSLSDSR--VDELGPLLASYGFNYHGSEVLYSGVLGTELTCEIFI 3173
            DATPF  +V K + ++   +S+  VDELG +L + GFNYHG EVLYSGV GTELTCEIFI
Sbjct: 962  DATPFANSVKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFI 1021

Query: 3174 GPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLL 3353
            GPVYYQRLRHMVSDKFQVRSTGT+DQ+TRQP           FGEMERDS+LAHGAAYLL
Sbjct: 1022 GPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLL 1081

Query: 3354 HDRLHTCSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKTSKG 3533
            HDRLHTCSD+H+ADVCSLCGS+LTAT I P K+A+REIGGLPP   PKKV CHAC+TSKG
Sbjct: 1082 HDRLHTCSDYHVADVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKG 1141

Query: 3534 METVAMPYVFKYLAAELAAMNVKMTLRLSNGAEA 3635
            METVAMPYVF+YLAAELAAMN+K+TL+L +GA A
Sbjct: 1142 METVAMPYVFRYLAAELAAMNIKITLQLGDGATA 1175


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
            gi|561006696|gb|ESW05690.1| hypothetical protein
            PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score = 1709 bits (4426), Expect = 0.0
 Identities = 840/1174 (71%), Positives = 985/1174 (83%), Gaps = 6/1174 (0%)
 Frame = +3

Query: 129  PQSQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFGDHELF 308
            P S  D+++LR+LFK HIESFD++V+AGL T L +I P+E+ D  +   LRI   +  ++
Sbjct: 5    PGSVPDFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVY 64

Query: 309  PPQKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSLPIMLKS 488
            PPQK+R  KT R AL P ECRQA  +YAGK  +++CFQY +   IRE V+FG  PIML+S
Sbjct: 65   PPQKERISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPVIRENVNFGQFPIMLQS 124

Query: 489  KACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTFRERQE 668
            K C+LRGADP +L+S KEE++EMGGYFILNGLER++RLLI+ KRN+PMS++R +F +R+E
Sbjct: 125  KLCNLRGADPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRRE 184

Query: 669  GFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALIDTNDLE 848
            G+TDKAV IRCVR DQSS+S RLYYL+NGSAR GFW+RG+E+LLPVG+VLKALIDT D E
Sbjct: 185  GYTDKAVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTTDRE 244

Query: 849  IYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEYFQPVMV 1028
            IY +LT  YNE+Y  GKGAVGTQLVGER +IILDE+RDLSL T  QCL++IGE+FQP+M 
Sbjct: 245  IYVNLTSCYNEKYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQPIMP 304

Query: 1029 GLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLDALQNQE 1208
             L   S++ V  +VLKD I VHL N+ DKFNLLIFM+QKLF+L+D T+ PDN D+LQN E
Sbjct: 305  ELMKDSYAIVADAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHE 364

Query: 1209 VLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNPSRNVGT 1388
            VLLPGHLI++Y+K+KL++WL K ++LL DE+QKK   FDF  +A VKK++DKN ++ V  
Sbjct: 365  VLLPGHLISLYIKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKLVSA 424

Query: 1389 AIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQRNTSVRK 1568
            ++EN+LKTGRL+TQ+GLDLQQ  G TV AERLNFLRF+SHFR+VHRGASFAG R T+VRK
Sbjct: 425  SVENLLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTTVRK 484

Query: 1569 LLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILSVLTGIG 1748
            LLPE+WGFLCPVHTPDGEPCGLLNHMT TCRITSFFDSQGN+K+ FKI+ SI  +L  +G
Sbjct: 485  LLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILMEVG 544

Query: 1749 MTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPEDLEVGY 1928
            MT SLPK+   GPPEAL+VLLDGCV+G ++S+ VEK V+++R LK+   S IP D+EVGY
Sbjct: 545  MTSSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPGDMEVGY 604

Query: 1929 VPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCPDGGNGG 2108
            VPLS GGAYPGLYLFTSPSRF+RPV+NIS+P++ S +IELIGPFEQ +MEIRC DGG+GG
Sbjct: 605  VPLSMGGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCLDGGDGG 664

Query: 2109 RRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQ 2288
            R+  FPATHEEIHPT + SVVANLTP+SDHNQSPRNMYQCQMAKQTMAFSSQ IQ RADQ
Sbjct: 665  RKSSFPATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQ 724

Query: 2289 KLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMF 2468
            KLYHLQTPQTPIVRT+ YTKY+IDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMF
Sbjct: 725  KLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMF 784

Query: 2469 HGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPNEPYCSI 2648
            HG IYQ ETIDL EQR  SD++ R+F +SN++K    SID+DGLP+VGQM+RP+EPYCSI
Sbjct: 785  HGQIYQTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDSDGLPHVGQMIRPDEPYCSI 844

Query: 2649 YNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKFSSRHGQ 2828
            YN V SST+ +  KGSE V VDYV+VD +N KK  QKVNIRFR PRNPVIGDKFSSRHGQ
Sbjct: 845  YNEVTSSTQTYKRKGSEAVYVDYVAVDVKN-KKHIQKVNIRFRHPRNPVIGDKFSSRHGQ 903

Query: 2829 KGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDAT 3008
            KGVCSQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDAT
Sbjct: 904  KGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDAT 963

Query: 3009 PFPGAVLKADEES-SLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTCEIFIGPVY 3185
            PF  +  K  E S S S S VD+LG LL   GFNYHG EVLYSGV GTELTCEIFIGPVY
Sbjct: 964  PFRSSTKKDGEGSDSKSGSLVDDLGVLLKEKGFNYHGLEVLYSGVYGTELTCEIFIGPVY 1023

Query: 3186 YQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRL 3365
            YQRLRHMVSDKFQVRSTGT+DQVTRQP           FGEMERDS+LAHGAAYLLHDRL
Sbjct: 1024 YQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRL 1083

Query: 3366 HTCSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIP-----KKVICHACKTSK 3530
            HTCSD+HIADVCSLCGS+L+ T IQP K+ VR+IGGLPPG +P     KKV CHAC+TSK
Sbjct: 1084 HTCSDYHIADVCSLCGSMLSTTFIQPQKRPVRQIGGLPPGRLPPGRAAKKVSCHACQTSK 1143

Query: 3531 GMETVAMPYVFKYLAAELAAMNVKMTLRLSNGAE 3632
            GMETVAMPYVF+YLAAELAAMN+KMTL+L++GAE
Sbjct: 1144 GMETVAMPYVFRYLAAELAAMNIKMTLKLNDGAE 1177


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score = 1694 bits (4386), Expect = 0.0
 Identities = 828/1178 (70%), Positives = 978/1178 (83%), Gaps = 4/1178 (0%)
 Frame = +3

Query: 114  EKSKAPQSQSD---YDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRI 284
            ++ K P   SD    + L++LFK HIESFDY+++ GL  +L  + PV+I+D  S KTLRI
Sbjct: 4    QRRKRPGPFSDAEELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRI 63

Query: 285  SFGDHELFPPQKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFG 464
                 E++PPQKDR  KT   ALYP ECRQA  +Y G F +++CFQ++    +RE+++FG
Sbjct: 64   WLDHPEVYPPQKDRSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLNFG 123

Query: 465  SLPIMLKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIR 644
              PIMLKSK C+LR ADP +L++ KEES EMGGYFILNGLER+VRLLI+ KRN+PMS++R
Sbjct: 124  EFPIMLKSKRCYLREADPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVR 183

Query: 645  HTFRERQEGFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKA 824
            ++FR+R+EG+TDKAV IRCVR D SSV+ +LYYL NGSAR GFW++G+E++LPVG++LKA
Sbjct: 184  NSFRDRREGYTDKAVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKA 243

Query: 825  LIDTNDLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIG 1004
            LIDTND EIY  LTC YNE+   GKGAVGTQLVGER +IILDEV+ L+L T  QCLQHIG
Sbjct: 244  LIDTNDREIYTKLTCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIG 303

Query: 1005 EYFQPVMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDN 1184
            E+FQP+M G+E++S+S V   VL++YIFVHL +N+DKFNLLIFMVQKLF+L+D T+ PDN
Sbjct: 304  EHFQPIMEGMESESYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDN 363

Query: 1185 LDALQNQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDK 1364
             D+LQNQEVLLPGHLITIYLK+KL++WL K ++L++D +  K K+FDF S+  VKKV++K
Sbjct: 364  SDSLQNQEVLLPGHLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEK 423

Query: 1365 NPSRNVGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAG 1544
            N    V  AIEN+LKTGRLITQ+GLDLQQ  G TV AERLN+ RF+S FR VHRGASFAG
Sbjct: 424  NRPTQVSAAIENLLKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAG 483

Query: 1545 QRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSI 1724
             R TSVRKLLPE+WGFLCPVHTPDGEPCGLLNHMT TCRITS+++S GN+++ FKIR+SI
Sbjct: 484  LRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSI 543

Query: 1725 LSVLTGIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGI 1904
            L VL G+GMT S PK+  AGPP+ L VLLDG V+GSL S   EK V+HLRRLKL   S I
Sbjct: 544  LDVLVGVGMTTSWPKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVI 603

Query: 1905 PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIR 2084
            P+DLEVGYVPLS GG YPGLYLFTSPSRF+RPVRNIS+P+ +  +IELIGPFEQ +MEIR
Sbjct: 604  PDDLEVGYVPLSLGGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIR 663

Query: 2085 CPDGGNGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 2264
            CPDGGNGGR + FPATHEEI PT + SVVANLTP+SDHNQSPRNMYQCQMAKQTMAFS Q
Sbjct: 664  CPDGGNGGRSNIFPATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQ 723

Query: 2265 AIQFRADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNK 2444
            AI  RADQKLYHLQTPQTPIVRT  YTKY +DE+P+GTNAIVAVLAYTGYDMEDAMILNK
Sbjct: 724  AINARADQKLYHLQTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNK 783

Query: 2445 SSVERGMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLR 2624
            SSVERGM HG IYQ ETIDL + +  SD+ QR+F R + D+++ S +D+DGLP+VGQ++R
Sbjct: 784  SSVERGMCHGQIYQTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIR 843

Query: 2625 PNEPYCSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGD 2804
            PNEPYCS  N V +S + +  KGSE VIVDYV+VD ++ KK  QK NIRFR PRNPVIGD
Sbjct: 844  PNEPYCSTINQVTNSKRLYNHKGSETVIVDYVAVDTKS-KKHLQKANIRFRHPRNPVIGD 902

Query: 2805 KFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSL 2984
            KFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL
Sbjct: 903  KFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSL 962

Query: 2985 NGKFVDATPFPGAVLKADEESSL-SDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTC 3161
            +GKFVDATPF  +V +A  ++   S+S VDELG +L + GFNYHG EVLYSGV GTELTC
Sbjct: 963  HGKFVDATPFSDSVKEAKGKTEAESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTC 1022

Query: 3162 EIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGA 3341
            EIFIGPVYYQRLRHMVSDK+QVR+TG VDQ+TRQP           FGEMERD+MLAHGA
Sbjct: 1023 EIFIGPVYYQRLRHMVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGA 1082

Query: 3342 AYLLHDRLHTCSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACK 3521
            AYLLHDRLHTCSD+HIADVCSLCGSILT +I+QPPK+ VREIGGLPP   PKKV CHAC+
Sbjct: 1083 AYLLHDRLHTCSDYHIADVCSLCGSILTTSIVQPPKRVVREIGGLPPARAPKKVTCHACQ 1142

Query: 3522 TSKGMETVAMPYVFKYLAAELAAMNVKMTLRLSNGAEA 3635
            TSKGMETVAMPYVF+YLAAELAAMN+ MT++L++GA A
Sbjct: 1143 TSKGMETVAMPYVFRYLAAELAAMNITMTIQLNSGAGA 1180


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score = 1689 bits (4375), Expect = 0.0
 Identities = 829/1168 (70%), Positives = 967/1168 (82%), Gaps = 1/1168 (0%)
 Frame = +3

Query: 135  SQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFGDHELFPP 314
            ++ DY +L++LF  HIESFDY+V+ GL T+L NI P+EI D  S   LRI FG  ELFPP
Sbjct: 21   AEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPP 80

Query: 315  QKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSLPIMLKSKA 494
            QK+R  K    ALYP ECRQA  +Y+GKFL+++CFQY +   IRE+ +FG  PIMLKSK 
Sbjct: 81   QKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKL 140

Query: 495  CHLRGADPVQ-LISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTFRERQEG 671
            CHLRGAD  + L++YKEE +EMGGYFIL GLER++RL+I+ KRN+P S+ R++FR+R+EG
Sbjct: 141  CHLRGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREG 200

Query: 672  FTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALIDTNDLEI 851
            ++DKAV IRCVR+DQS+VS +LYYL NGSAR GFWI+G+E+LLPVG++LKAL+DT D EI
Sbjct: 201  YSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEI 260

Query: 852  YASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEYFQPVMVG 1031
            Y +LTC YNEE    KG+VGTQLVGER +IILDEV+ LSL T  QCL+HIGE+FQPV++G
Sbjct: 261  YVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIG 320

Query: 1032 LENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLDALQNQEV 1211
            ++N S+  V  +VL+DYIFVHL NN DKFNLLIFM+QKLF+L+D T+  DN D+LQNQEV
Sbjct: 321  MQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 380

Query: 1212 LLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNPSRNVGTA 1391
            LLPGHLITIYLK+KLQ+WL K +R LQ+E   + K F+  SL  VKK ++KN  + +G  
Sbjct: 381  LLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLT 440

Query: 1392 IENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQRNTSVRKL 1571
            IE+MLKTGRL TQSGLDLQQ  GMTV AE+LNFLRF+SHFR+VHRGASFAG R TSVRKL
Sbjct: 441  IESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 500

Query: 1572 LPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILSVLTGIGM 1751
            LPE+WGFLCPVHTPDGEPCGLLNHMT++CRITS++DS+GNVK+ FK+R+SIL+VL  IGM
Sbjct: 501  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGM 560

Query: 1752 TPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPEDLEVGYV 1931
            TPS PKLV+AGPPE LSVLLDG + G + S L+EKAV+HLRRLKL   S IP DLEVGY+
Sbjct: 561  TPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYI 620

Query: 1932 PLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCPDGGNGGR 2111
            PLS  GAYPGLYLFTSPSRF+RPVRNIS P +E  ++ELIGPFEQ YMEI CPDGG+GGR
Sbjct: 621  PLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGR 680

Query: 2112 RDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQK 2291
            +  FPATH EIHPT I SVV NLTP+SDHNQSPRNMYQCQM KQTM FSSQA+  RADQK
Sbjct: 681  KTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 740

Query: 2292 LYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFH 2471
            LYHLQTPQTPIVRT AY KY +D++P GTNAIVAVLAY+GYDMEDAM+LNKSSV+RGM H
Sbjct: 741  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCH 800

Query: 2472 GTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPNEPYCSIY 2651
            G IYQ ETIDL EQ   SD+AQRLF RSN+DK+ H  ID+DGLPYVGQ + PNEPYCSIY
Sbjct: 801  GHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPYCSIY 860

Query: 2652 NTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKFSSRHGQK 2831
            N + S T    LKGSEPV+VDYV+VD +N K   QK NIRFRR RNPVIGDKFSSRHGQK
Sbjct: 861  NEITSQTTCMKLKGSEPVVVDYVAVDVKN-KAHLQKANIRFRRSRNPVIGDKFSSRHGQK 919

Query: 2832 GVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATP 3011
            GVCSQLWPD+DMPFS VTGMRPDLIINPHAFPSRMTI MLLESIAAKGG+L+GKFVDATP
Sbjct: 920  GVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATP 979

Query: 3012 FPGAVLKADEESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTCEIFIGPVYYQ 3191
            F   + +++ ESS   S VD+LG +LA  GFN+HG+EVLYSGV GTELTC IFIGPVYYQ
Sbjct: 980  FSNTMKESESESS---SLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCRIFIGPVYYQ 1036

Query: 3192 RLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHT 3371
            RLRHMVSDKFQVRSTG VD +TRQP           FGEMERDS+LAHGA+YLLHDRLHT
Sbjct: 1037 RLRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGASYLLHDRLHT 1096

Query: 3372 CSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKTSKGMETVAM 3551
             SDHHIADVCS CGS+LT+++IQPPK+AV+ I    P   PKKV C AC++SKGMETVAM
Sbjct: 1097 SSDHHIADVCSECGSVLTSSVIQPPKRAVQAILKQLPAREPKKVTCVACRSSKGMETVAM 1156

Query: 3552 PYVFKYLAAELAAMNVKMTLRLSNGAEA 3635
            PYVFKYLAAELAAMN+KMTL+LSN A A
Sbjct: 1157 PYVFKYLAAELAAMNIKMTLKLSNEAGA 1184


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score = 1689 bits (4374), Expect = 0.0
 Identities = 830/1168 (71%), Positives = 965/1168 (82%), Gaps = 1/1168 (0%)
 Frame = +3

Query: 135  SQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFGDHELFPP 314
            ++ DY +L++LF  HIESFDY+V+ GL T+L NI P+EI D  S   LRI FG  ELFPP
Sbjct: 16   AEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPP 75

Query: 315  QKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSLPIMLKSKA 494
            QK+R  KT   ALYP ECRQA  +Y GKFL+++CFQY +   IRE+ +FG  PIMLKSK 
Sbjct: 76   QKERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKL 135

Query: 495  CHLRGADPVQ-LISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTFRERQEG 671
            CHLRGAD  + LI+YKEE +EMGGYFIL GLER++RL+I+ KRN+P S+ R++FR+R+EG
Sbjct: 136  CHLRGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREG 195

Query: 672  FTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALIDTNDLEI 851
            ++DKAV IRCVR+DQS+VS +LYYL NGSAR GFWI+G+E+LLPVG++LKAL+DT D EI
Sbjct: 196  YSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEI 255

Query: 852  YASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEYFQPVMVG 1031
            Y +LTC YNEE    KG+VGTQLVGER +IILDEV+ LSL T  QCL+HIGE+FQPV++G
Sbjct: 256  YVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIG 315

Query: 1032 LENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLDALQNQEV 1211
            ++N S+  V  +VL+DYIFVHL NN DKFNLLIFM+QKLF+L+D T+  DN D+LQNQEV
Sbjct: 316  MQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 375

Query: 1212 LLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNPSRNVGTA 1391
            LLPGHLITIYLK+KLQ+WL K +R LQ+E   + K F+  SL  VKK ++KN  + +G A
Sbjct: 376  LLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLA 435

Query: 1392 IENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQRNTSVRKL 1571
            IE+MLKTGRL TQSGLDLQQ  GMTV AE+LNFLRF+SHFR+VHRGASFAG R TSVRKL
Sbjct: 436  IESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 495

Query: 1572 LPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILSVLTGIGM 1751
            LPE+WGFLCPVHTPDGEPCGLLNHMT++CRITS++DS+GNVK+ FK+R+SIL+VL  IGM
Sbjct: 496  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGM 555

Query: 1752 TPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPEDLEVGYV 1931
            TP  PKLV+ GPPE LSVLLDG + G + S L+EKAV+HLRRLKL   S IP DLEVGY+
Sbjct: 556  TPPSPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYI 615

Query: 1932 PLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCPDGGNGGR 2111
            PLS  GAYPGLYLFTSPSRF+RPVRNIS P +E  ++EL+GPFEQ YMEI CPDGG+GGR
Sbjct: 616  PLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQVYMEISCPDGGDGGR 675

Query: 2112 RDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQK 2291
            +  FPATH EIHPT I SVV NLTP+SDHNQSPRNMYQCQM KQTM FSSQA+  RADQK
Sbjct: 676  KTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 735

Query: 2292 LYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFH 2471
            LYHLQTPQTPIVRT AY KY +D++P GTNAIVAVLAY+GYDMEDAM+LNKSSV+RGM H
Sbjct: 736  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCH 795

Query: 2472 GTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPNEPYCSIY 2651
            G IYQ ETIDL EQ   SD+AQRLF RSN+DK+ H  ID DGLPYVGQ + PNEPYCSIY
Sbjct: 796  GHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGLPYVGQRINPNEPYCSIY 855

Query: 2652 NTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKFSSRHGQK 2831
            N + S T    LKGSEPV+VDYV+VD +N K   QK NIRFRR RNPVIGDKFSSRHGQK
Sbjct: 856  NEITSQTTSMKLKGSEPVVVDYVAVDVKN-KTHLQKANIRFRRSRNPVIGDKFSSRHGQK 914

Query: 2832 GVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATP 3011
            GVCSQLWPD+DMPFS VTGMRPDLIINPHAFPSRMTI MLLESIAAKGG+L+GKFVDATP
Sbjct: 915  GVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATP 974

Query: 3012 FPGAVLKADEESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTCEIFIGPVYYQ 3191
            F   + +++ ESS   S VD+LG +LA  GFN+HG+EVLYSGV GTELTC IFIGPVYYQ
Sbjct: 975  FSNTMKESESESS---SLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCLIFIGPVYYQ 1031

Query: 3192 RLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHT 3371
            RLRHMVSDKFQVRSTG VD +TRQP           FGEMERDS+LAHGAAYLLHDRLHT
Sbjct: 1032 RLRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLHT 1091

Query: 3372 CSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKTSKGMETVAM 3551
             SDHHIADVCS CGS+LT+++IQPPK+AV+ I    P   PKKV C AC++SKGMETVAM
Sbjct: 1092 SSDHHIADVCSECGSVLTSSVIQPPKRAVQVILKQLPAREPKKVTCVACRSSKGMETVAM 1151

Query: 3552 PYVFKYLAAELAAMNVKMTLRLSNGAEA 3635
            PYVFKYLAAELAAMN+KMTL+LSN A A
Sbjct: 1152 PYVFKYLAAELAAMNIKMTLKLSNEAGA 1179


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1687 bits (4369), Expect = 0.0
 Identities = 835/1180 (70%), Positives = 965/1180 (81%), Gaps = 8/1180 (0%)
 Frame = +3

Query: 114  EKSKAPQSQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFG 293
            +K     +  DY +L++L + HI+SFDY++E GL  +L NI P                 
Sbjct: 7    KKENPSSAMGDYSALQELTRHHIDSFDYMIERGLEIMLDNIKP----------------- 49

Query: 294  DHELFPPQKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSLP 473
                         +T    L P ECRQA  +Y GKF  ++CF+Y     IRE+ +FG LP
Sbjct: 50   ----------ESSRTKHKRLLPFECRQAKISYTGKFEADVCFEYHGKAVIREKYNFGQLP 99

Query: 474  IMLKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTF 653
            IMLKS+ CHL G D  QL+S+ EES EMGGYFILNGLER+VRLLIM KRN+PMS +R +F
Sbjct: 100  IMLKSRLCHLYGVDSQQLVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMSTVRGSF 159

Query: 654  RERQEGFTDKAVTIRCVRD------DQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVV 815
            R+R+EG+TDKAV IRCVR+      DQSSVS +LYYL++GSAR GFWI+G+E+LLP G+V
Sbjct: 160  RDRREGYTDKAVVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYLLPAGIV 219

Query: 816  LKALIDTNDLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQ 995
            LKAL +T D EIY  LTC Y+E+Y+  KGAVG+QLVGER +IILDEVRDLSL T  +CL+
Sbjct: 220  LKALAETTDREIYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFTQSECLR 279

Query: 996  HIGEYFQPVMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTAT 1175
            HIGE+FQPVM GLE ++ S V  +VLKDYIFVHL N DDKFNLLIFM+QKLF+LVD T+ 
Sbjct: 280  HIGEHFQPVMDGLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSV 339

Query: 1176 PDNLDALQNQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKV 1355
             DN D+LQNQEVLLPGHL+TIYLK+KL+EWL KA+++LQ+E+ K   +F+F S+  VKKV
Sbjct: 340  VDNPDSLQNQEVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIAKNN-NFNFLSVLDVKKV 398

Query: 1356 LDKNPSRNVGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGAS 1535
            +DKNPS  +  A+ENMLKTGRL+TQ+GLDLQQ  G TV AERLNFLRF+S FR+VHRGAS
Sbjct: 399  IDKNPSTTISLAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGAS 458

Query: 1536 FAGQRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIR 1715
            FAG R TSVRKLLPE+WGFLCPVHTPDGEPCGLLNHMT +CRITS+FDSQG VK+ F IR
Sbjct: 459  FAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDIR 518

Query: 1716 LSILSVLTGIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPF 1895
             SIL VLT +GMT SLPKLV+AGPP+ LSVLLDG V+GS+ S+ VEK V HLRRLK+   
Sbjct: 519  KSILGVLTSLGMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRRLKVAAS 578

Query: 1896 SGIPEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYM 2075
            S IP+DLEVGYVPLS GGA+PGLYLFTSPSRF+RPV+NIS+P  E  NIELIGPFEQ +M
Sbjct: 579  SVIPDDLEVGYVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIGPFEQVFM 638

Query: 2076 EIRCPDGGNGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAF 2255
            EIRCPDGGNGGR D FPATHEEIHPT + SVVANLTP+SDHNQSPRNMYQCQMAKQTMAF
Sbjct: 639  EIRCPDGGNGGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAF 698

Query: 2256 SSQAIQFRADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMI 2435
            S Q+++FRADQKLYHLQTPQTPIVRT++YTKY +DE+PTGTNAIVAVLAYTGYDMEDAMI
Sbjct: 699  SLQSLRFRADQKLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLAYTGYDMEDAMI 758

Query: 2436 LNKSSVERGMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQ 2615
            LNKSSVERGM HG IYQ ETIDL E+   SD+AQR+F RSNIDK++HS ID+DGLPYVGQ
Sbjct: 759  LNKSSVERGMCHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDSDGLPYVGQ 818

Query: 2616 MLRPNEPYCSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPV 2795
            M+ PNEPYCSIYN + ++T+    KGS+PVIVDYV++D +N KK  QKVNIRFR PRNP+
Sbjct: 819  MIHPNEPYCSIYNEITNTTRTNNRKGSDPVIVDYVAIDTKN-KKHLQKVNIRFRHPRNPI 877

Query: 2796 IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKG 2975
            IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI MLLES+AAKG
Sbjct: 878  IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESLAAKG 937

Query: 2976 GSLNGKFVDATPFPGAV--LKADEESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGT 3149
            GSLNGKFVDATPF  +V  +   E  S S+S VD+LG +L S+GFNYHG EVLYSGV GT
Sbjct: 938  GSLNGKFVDATPFTSSVKNVNGGEAKSESESLVDDLGNMLRSHGFNYHGVEVLYSGVYGT 997

Query: 3150 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSML 3329
            ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ+TRQP           FGEMERD+ML
Sbjct: 998  ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDAML 1057

Query: 3330 AHGAAYLLHDRLHTCSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVIC 3509
            AHGAAYLLHDRLHTCSD+HIADVCSLCGSILT + IQ  K+ VR+IGGLPP   PKKV C
Sbjct: 1058 AHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSFIQTQKRVVRDIGGLPPVGAPKKVAC 1117

Query: 3510 HACKTSKGMETVAMPYVFKYLAAELAAMNVKMTLRLSNGA 3629
            H+C+TSKGMETVAMPYVF+YLAAELAAMN+KM ++LS GA
Sbjct: 1118 HSCQTSKGMETVAMPYVFRYLAAELAAMNIKMNVQLSGGA 1157


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score = 1644 bits (4258), Expect = 0.0
 Identities = 817/1168 (69%), Positives = 954/1168 (81%), Gaps = 1/1168 (0%)
 Frame = +3

Query: 129  PQSQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFGDHELF 308
            P S  D+++LR+LFK HIESFDY+V+AGL T+L +I PVE++D  +   LRI   +  L+
Sbjct: 5    PGSVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLY 64

Query: 309  PPQKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSLPIMLKS 488
            PPQK+R  +T R AL P ECRQA  +Y+GK  +++CFQY +   IRE V+FG  PIML+S
Sbjct: 65   PPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQS 124

Query: 489  KACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHTFRERQE 668
            K C+LRGADP +L+SYKEE++EMGGYFILNGLER+VRLLI+ KRN+PMS++R++F +R+E
Sbjct: 125  KLCNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRRE 184

Query: 669  GFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALIDTNDLE 848
            G+TDKAV IRCVR DQSS+S RLYYL+NGSAR GFW+RG+E+LLPVG++LKALIDT D E
Sbjct: 185  GYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDRE 244

Query: 849  IYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEYFQPVMV 1028
            IY +LT  YNE+Y+ GKGAVGTQLVGER +IILDE+RDLSL T LQCL++IGE+FQPVM 
Sbjct: 245  IYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMN 304

Query: 1029 GLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLDALQNQE 1208
             L+N S+  V  +VLKD I VHL NN DKFNLLIFM+QKLF+L+D T+ PDN D+LQN E
Sbjct: 305  ELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHE 364

Query: 1209 VLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNPSRNVGT 1388
            VLLPGHLIT+YLK+KL++WL K RRLL DE+ KK K FDF  +  VKKV+DKN  + V T
Sbjct: 365  VLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVST 424

Query: 1389 AIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQRNTSVRK 1568
            A+ENMLKTGRL+TQ+GLDLQQ  G TV AERLNFLRF+SHFR+VHRGASFAG R T+VRK
Sbjct: 425  AVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRK 484

Query: 1569 LLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILSVLTGIG 1748
            LLPE+WGFLCPVHTPDGEPCGLLNHMT T RITSFFDSQGN+K+ FKI++SIL+VL  +G
Sbjct: 485  LLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVG 544

Query: 1749 MTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPEDLEVGY 1928
            MTPSLPK+   GPPEAL+VLLDGCV+G ++S+ VEK V+H+R LK+   + IP+D+EVGY
Sbjct: 545  MTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGY 604

Query: 1929 VPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCPDGGNGG 2108
            VPLS GGAYPGLYL TSPSRF+RPVRNIS+ +D S NIELIGPFEQ +MEIRCPDGG+GG
Sbjct: 605  VPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGG 664

Query: 2109 RRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQ 2288
            R+  FPATHEEIHPT + SVVANLTP+SDHNQSPRNMYQ   A   + F++ +   R   
Sbjct: 665  RKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQYGKANNGIFFTNYSTSCR--- 721

Query: 2289 KLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMF 2468
                      P V ++           +GTNAIVAVLAYTGYDMEDAMILNKSSVERGMF
Sbjct: 722  ----------PKVISS-----------SGTNAIVAVLAYTGYDMEDAMILNKSSVERGMF 760

Query: 2469 HGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPNEPYCSI 2648
            HG IYQ ETIDL EQ   SD++ R+F +SNI+K+   SID+DGLP+VGQM+RP+EPYCSI
Sbjct: 761  HGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSI 820

Query: 2649 YNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKFSSRHGQ 2828
            YN V SS      KGSE V VDYV+ D +N KK  QKVNIRFR PRNPVIGDKFSSRHGQ
Sbjct: 821  YNEVTSSIHTLKRKGSEAVYVDYVAADVKN-KKHLQKVNIRFRHPRNPVIGDKFSSRHGQ 879

Query: 2829 KGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDAT 3008
            KGVCSQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDAT
Sbjct: 880  KGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDAT 939

Query: 3009 PFPGAVLK-ADEESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTELTCEIFIGPVY 3185
            PF  +V K + E  S S S VD+LG LL   GFNYHG EVLYSGV GTELTCEIFIGPVY
Sbjct: 940  PFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVY 999

Query: 3186 YQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRL 3365
            YQRLRHMVSDKFQVRSTGT+DQVTRQP           FGEMERDS+LAHGAAYLLHDRL
Sbjct: 1000 YQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRL 1059

Query: 3366 HTCSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKTSKGMETV 3545
            HTCSD+HIADVCSLCGS+L  T IQP K+ VREIGGLPPG  PKKV CHAC+TSKGMETV
Sbjct: 1060 HTCSDYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETV 1119

Query: 3546 AMPYVFKYLAAELAAMNVKMTLRLSNGA 3629
            AMPYVF+YLAAELAAMN+KMTL+LS+GA
Sbjct: 1120 AMPYVFRYLAAELAAMNIKMTLKLSDGA 1147


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score = 1641 bits (4250), Expect = 0.0
 Identities = 815/1177 (69%), Positives = 966/1177 (82%), Gaps = 3/1177 (0%)
 Frame = +3

Query: 114  EKSKAPQSQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISFG 293
            ++ K   S  D   LR+LF+ HIESFDYLV AGL  +L +I PV++ +P + +TLRI F 
Sbjct: 4    QQHKRRTSAGDLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRIWFA 63

Query: 294  DHELFP-PQKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGSL 470
            D  +   P KDR  +     LYP ECRQ   +Y GK L ++ FQ  +  P+RE+ +FG  
Sbjct: 64   DDPILGRPLKDRSTEP----LYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQF 119

Query: 471  PIMLKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRHT 650
            PIML SK C+LRG DP QL+  KEES+EMGGYFILNGLER++R +I+ KRN+PMS +R++
Sbjct: 120  PIMLMSKCCNLRGHDPQQLVYCKEESSEMGGYFILNGLERVIRPVILPKRNYPMSTVRNS 179

Query: 651  FRERQEGFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKALI 830
            FR+R+EG+TDKAV IRC RDDQSSV+ +LYYLQNGSAR G WI+GKEFLLPVG++LKALI
Sbjct: 180  FRDRKEGYTDKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALI 239

Query: 831  DTNDLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGEY 1010
            DT D E+YASLTC Y E+++ GKGAVGTQLVGER +II++EV DL L T  QCL+HIGE+
Sbjct: 240  DTPDNELYASLTCCYPEKFEKGKGAVGTQLVGERAQIIINEVVDLGLFTRGQCLEHIGEH 299

Query: 1011 FQPVMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNLD 1190
            FQP+M GLEN+ +S VG +VLKDYIFVHL  N+DKFNLLIFM+QKLF+L+D T+  DN D
Sbjct: 300  FQPLMGGLENEPYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPD 359

Query: 1191 ALQNQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKNP 1370
            +LQNQEVLLPGHLITIYLK+KL++WL + ++LLQDE++K+  + +F S+  +KKVLDKNP
Sbjct: 360  SLQNQEVLLPGHLITIYLKEKLEDWLQRTKKLLQDEIKKESNNINFGSVDSLKKVLDKNP 419

Query: 1371 SRNVGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQR 1550
            +R +  A+ENMLKTGR+ TQ+GLDLQQ  G +V AERLNFLRF+SHFR+VHRGASFAG R
Sbjct: 420  TRQISLAVENMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLR 479

Query: 1551 NTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSILS 1730
             TSVRKLLPE+WGFLCPVHTPDGEPCGLLNHMT TCRITS+FD+QGN+++  K+++SIL+
Sbjct: 480  TTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKMQMSILN 539

Query: 1731 VLTGIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIPE 1910
            VL  +GM PSLP LV AG P  LSVLLDG V+G +SST VEK V+HLR+LK+   S IP+
Sbjct: 540  VLIEVGMIPSLPMLVHAGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPD 599

Query: 1911 DLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRCP 2090
            DLEVGYVPLS GGAYPGLYLFTSPSRF+RPV+NIS+   E  NIELIGPFEQ +MEIRCP
Sbjct: 600  DLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIRCP 659

Query: 2091 DGGNGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAI 2270
            DG +GGR+D FPATHEEIHPTG+ SVVANLTP+S+HNQSPRNMYQCQMAKQTM FS QA+
Sbjct: 660  DGRDGGRKDAFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQAL 719

Query: 2271 QFRADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSS 2450
            + RADQKLYHL+TPQ+PIVRT  YT Y +DE+PTGTNAIVAVL+YTGYDMEDAMIL+KSS
Sbjct: 720  RNRADQKLYHLKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSS 779

Query: 2451 VERGMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRPN 2630
            V+RGMFHG +YQ E+IDL +Q+  S  +QR F RS  DK+ HS ID+DGLPYVGQ ++P+
Sbjct: 780  VDRGMFHGLVYQTESIDLSDQKGRSG-SQRSFRRSAADKSYHSLIDSDGLPYVGQTIKPD 838

Query: 2631 EPYCSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDKF 2810
            EPY S Y+ V  + +    KGSEP IVDYV++D    KK  QKVNIRFR PRNP+IGDKF
Sbjct: 839  EPYYSTYDEVKGAIRTTKRKGSEPAIVDYVAIDG---KKQLQKVNIRFRHPRNPIIGDKF 895

Query: 2811 SSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNG 2990
            SSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+G
Sbjct: 896  SSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHG 955

Query: 2991 KFVDATPFPGAVLKADEESSLSDSR--VDELGPLLASYGFNYHGSEVLYSGVLGTELTCE 3164
            K+VDATPF  +  K  EE++   S+  VDELG +L   GFNY+G+EVLYSGV GTELTCE
Sbjct: 956  KYVDATPFANSEKKVKEETNGEKSKTLVDELGEMLKVKGFNYNGAEVLYSGVYGTELTCE 1015

Query: 3165 IFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGAA 3344
            IFIGPVYYQRLRHMVSDKFQVRSTG VDQVTRQP           FGEMERDS+LAHGAA
Sbjct: 1016 IFIGPVYYQRLRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAA 1075

Query: 3345 YLLHDRLHTCSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACKT 3524
            YLLHDRLHTCSD+HIADVCSLCGSILT + +QPP + V EI G+PP   PKKV CHACKT
Sbjct: 1076 YLLHDRLHTCSDYHIADVCSLCGSILTTSSVQPPVR-VCEIPGMPPMRAPKKVTCHACKT 1134

Query: 3525 SKGMETVAMPYVFKYLAAELAAMNVKMTLRLSNGAEA 3635
            SKGMETVAMPYVF+YLAAELAAMN+K+ L+LSN + A
Sbjct: 1135 SKGMETVAMPYVFRYLAAELAAMNIKLNLQLSNASGA 1171


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score = 1638 bits (4241), Expect = 0.0
 Identities = 811/1178 (68%), Positives = 967/1178 (82%), Gaps = 3/1178 (0%)
 Frame = +3

Query: 111  IEKSKAPQSQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLRISF 290
            +++ K   S  D   LR+LF+ HI+SFDYL+ AGL  +L +I PV++ +P + +TLRI F
Sbjct: 1    MQQHKRRTSAGDLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWF 60

Query: 291  GDHELFP-PQKDRGHKTFRSALYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVSFGS 467
             D  +   P KDR  +     LYP ECRQ   +Y GK L ++ FQ  +  P+RE+ +FG 
Sbjct: 61   ADDPILGRPLKDRSSEP----LYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQ 116

Query: 468  LPIMLKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSVIRH 647
             PIML SK C+LRG DP QL+S KEE++EMGGYFILNGLER++R +I+ KRN+PMS +R+
Sbjct: 117  FPIMLMSKCCNLRGHDPQQLVSCKEEASEMGGYFILNGLERVIRPVILPKRNYPMSTVRN 176

Query: 648  TFRERQEGFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVLKAL 827
            +FR+R+EG+TDKAV IRC RDDQSSV+ +LYYLQNGSAR G WI+GKEFLLPVG++LKAL
Sbjct: 177  SFRDRKEGYTDKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKAL 236

Query: 828  IDTNDLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQHIGE 1007
            +DT D E+YASLTC Y  +++ GKGAVGTQLVGER +II++EV +L L T  QCL++IGE
Sbjct: 237  VDTPDNELYASLTCCYPGKFEKGKGAVGTQLVGERAQIIINEVVELGLFTRGQCLENIGE 296

Query: 1008 YFQPVMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATPDNL 1187
            +FQP+M GLEN+S+S VG +VLKDYIFVHL  N+DKFNLLIFM+QKLF+L+D T+  DN 
Sbjct: 297  HFQPLMSGLENESYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNP 356

Query: 1188 DALQNQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVLDKN 1367
            D+LQNQEVLLPGHLITIYLK+KL++WL + ++LLQDE++K+  + +F S+  +KKVLDKN
Sbjct: 357  DSLQNQEVLLPGHLITIYLKEKLEDWLQRTKKLLQDEIKKENNNINFGSVDSLKKVLDKN 416

Query: 1368 PSRNVGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASFAGQ 1547
            P+R +  A+ENMLKTGR+ TQ+GLDLQQ  G +V AERLNFLRF+SHFR+VHRGASFAG 
Sbjct: 417  PTRQISLAVENMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGL 476

Query: 1548 RNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRLSIL 1727
            R TSVRKLLPE+WGFLCPVHTPDGEPCGLLNHMT TCRITS+FD+QGN+++  KIR+SIL
Sbjct: 477  RTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKIRMSIL 536

Query: 1728 SVLTGIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFSGIP 1907
            +VL  +GM PSLP LV  G P  LSVLLDG V+G +SST VEK V+HLR+LK+   S IP
Sbjct: 537  NVLIEVGMIPSLPMLVHVGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIP 596

Query: 1908 EDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYMEIRC 2087
            +DLEVGYVPLS GGAYPGLYLFTSPSRF+RPV+NIS+   E  NIELIGPFEQ +MEI+C
Sbjct: 597  DDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIKC 656

Query: 2088 PDGGNGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQA 2267
            PDG +GGR+D FPATHEEIHPTG+ SVVANLTP+S+HNQSPRNMYQCQMAKQTM FS QA
Sbjct: 657  PDGRDGGRKDAFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQA 716

Query: 2268 IQFRADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMILNKS 2447
            ++ RADQKLYHL+TPQ+PIVRT  YT Y +DE+PTGTNAIVAVL+YTGYDMEDAMIL+KS
Sbjct: 717  LRNRADQKLYHLKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKS 776

Query: 2448 SVERGMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQMLRP 2627
            SV+RGMFHG +YQ E++DL +Q+  S  +QR F RS  DK+ HS ID+DGLPYVGQ + P
Sbjct: 777  SVDRGMFHGLVYQTESVDLSDQKGRSG-SQRSFRRSAADKSHHSLIDSDGLPYVGQTINP 835

Query: 2628 NEPYCSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVIGDK 2807
            +EPY SIY+ V  + +    KGSEP IVDYV++D    KK  QKVNIRFR PRNP+IGDK
Sbjct: 836  DEPYYSIYDEVKGAIRTTKRKGSEPAIVDYVAIDG---KKHLQKVNIRFRHPRNPIIGDK 892

Query: 2808 FSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLN 2987
            FSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+
Sbjct: 893  FSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLH 952

Query: 2988 GKFVDATPFPGAVLKADEESSLSDSR--VDELGPLLASYGFNYHGSEVLYSGVLGTELTC 3161
            GKFVDATPF  +  K +EE++   S+  VDELG +L   GFNY+G+EVLYSGV GTELTC
Sbjct: 953  GKFVDATPFANSEKKVNEETNGEKSKTLVDELGEMLKVKGFNYYGAEVLYSGVYGTELTC 1012

Query: 3162 EIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAHGA 3341
            EIFIGPVYYQRLRHMVSDKFQVRSTG VDQVTRQP           FGEMERDS+LAHGA
Sbjct: 1013 EIFIGPVYYQRLRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGA 1072

Query: 3342 AYLLHDRLHTCSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIPKKVICHACK 3521
            AYLLHDRLHTCSD+HIADVCSLCGSILT + +Q P+  VREI G+PP   PKKV CHACK
Sbjct: 1073 AYLLHDRLHTCSDYHIADVCSLCGSILTTSSVQ-PQVPVREIPGMPPMRAPKKVTCHACK 1131

Query: 3522 TSKGMETVAMPYVFKYLAAELAAMNVKMTLRLSNGAEA 3635
            TSKGMETVAMPYVF+YLAAELAAMN+K+ L+LSN   A
Sbjct: 1132 TSKGMETVAMPYVFRYLAAELAAMNIKLNLQLSNATGA 1169


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score = 1621 bits (4197), Expect = 0.0
 Identities = 776/1067 (72%), Positives = 918/1067 (86%), Gaps = 2/1067 (0%)
 Frame = +3

Query: 441  IRERVSFGSLPIMLKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKR 620
            +RER +FG  P+MLK++ CHL+GAD  +L+S KEE+ EMGGYFILNGLER+ R +I+ K+
Sbjct: 16   VRERFNFGQFPVMLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQ 75

Query: 621  NFPMSVIRHTFRERQEGFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLL 800
            N+PMS++R +FR+R+EG+TDKAV IRCVR DQSSV+ +LYYL NGS R GFW++GKE+LL
Sbjct: 76   NYPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLL 135

Query: 801  PVGVVLKALIDTNDLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTH 980
            PVG+VLKAL+DTNDLEI+  LTC Y+E+Y+  KGAVG+ LV ERV+IIL EV+DLSL+T 
Sbjct: 136  PVGIVLKALVDTNDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTR 195

Query: 981  LQCLQHIGEYFQPVMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALV 1160
            LQCLQHIGE+FQPV+ GL+++S+  V  +V++DYIFVHL +N+DKFNLLIFM+QKLF+LV
Sbjct: 196  LQCLQHIGEHFQPVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLV 255

Query: 1161 DHTATPDNLDALQNQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLA 1340
            DHT+  DN D+LQNQE+LLPGHLITIYLK+KL++WL K ++L+QDE++  GK FDFF+LA
Sbjct: 256  DHTSVSDNPDSLQNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLA 315

Query: 1341 HVKKVLDKNPSRNVGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSV 1520
            ++KKV++KNPS+ +GT+IE MLKTGRL TQ+GLDLQQ  G TV AERLNFLRFIS FR+V
Sbjct: 316  NIKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAV 375

Query: 1521 HRGASFAGQRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKE 1700
            HRGASFAG R TSVRKLLPE+WGFLCPVHTPDGEPCGLLNHMTSTCR+ S++DS+GN+++
Sbjct: 376  HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRD 435

Query: 1701 IFKIRLSILSVLTGIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRL 1880
              K+R SIL VL G+GM PSLPKLV++GPP  LSVLLDG V+G + S+ +EK V+HLRRL
Sbjct: 436  FSKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRL 495

Query: 1881 KLFPFSGIPEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPF 2060
            K+   S IP+DLEVGYVPLS GGAYPGLYLFTSP +F+RPVRNIS+P++ES NIELIGPF
Sbjct: 496  KVSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPF 555

Query: 2061 EQAYMEIRCPDGGNGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAK 2240
            EQ +MEIRCPDGG+GGRR+ FPATHEEIHPTG+ SVVANLTP+SDHNQSPRNMYQCQMAK
Sbjct: 556  EQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAK 615

Query: 2241 QTMAFSSQAIQFRADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDM 2420
            QTM FS QA++FRADQKLYHLQTPQTPIVRT  YTKY IDE+PTGTNAIVAVLAYTGYDM
Sbjct: 616  QTMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDM 675

Query: 2421 EDAMILNKSSVERGMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGL 2600
            EDAMILNKSSV+RGM HG IYQ ETIDL +     D+ Q+LF R+   K++HS ID+DGL
Sbjct: 676  EDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGL 735

Query: 2601 PYVGQMLRPNEPYCSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRR 2780
            PYVGQM+ P EPYCSIY+   +S +  + KGSE V VDYV+VD +N K  PQK NIRFR 
Sbjct: 736  PYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRH 795

Query: 2781 PRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLES 2960
             RNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI MLLES
Sbjct: 796  TRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLES 855

Query: 2961 IAAKGGSLNGKFVDATPFPGAVLKADEESSLSDSR--VDELGPLLASYGFNYHGSEVLYS 3134
            +AAKGGSL+GKF+DATPF  +V K + ++   +S+  VDELG +L + GFNYHG EVLYS
Sbjct: 856  VAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYS 915

Query: 3135 GVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 3314
            GV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+TRQP           FGEME
Sbjct: 916  GVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRGGGIRFGEME 975

Query: 3315 RDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTATIIQPPKKAVREIGGLPPGSIP 3494
            RDS+LAHGAAYLLHDRLHTCSD+H+ADVCSLCGS+LTAT I P K+A+REIGGLPP   P
Sbjct: 976  RDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHPQKRAIREIGGLPPARAP 1035

Query: 3495 KKVICHACKTSKGMETVAMPYVFKYLAAELAAMNVKMTLRLSNGAEA 3635
            KKV CHAC+TSKGMETVAMPYVF+YLAAELAAMN+K+TL+L +GA A
Sbjct: 1036 KKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQLGDGATA 1082


>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
            gi|557093303|gb|ESQ33885.1| hypothetical protein
            EUTSA_v10006599mg [Eutrema salsugineum]
          Length = 1183

 Score = 1606 bits (4159), Expect = 0.0
 Identities = 796/1178 (67%), Positives = 946/1178 (80%), Gaps = 5/1178 (0%)
 Frame = +3

Query: 102  MGVIEKSKAPQSQ-SDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTL 278
            M V EK K    +  D+  L +L   HIESFDY+ E GLA + S I PV +Y+P + + L
Sbjct: 1    MDVKEKKKDTVPKIEDFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPSTERKL 60

Query: 279  RISFGDHELFPPQKDRGHKTFRS-ALYPCECRQAGSTYAGKFLLELCFQY-ENNFPIRER 452
             I   D  ++ PQK+    T R  AL+P ECRQA  +Y G  + E+CF+Y E+ + +R+R
Sbjct: 61   SIWLEDPRVYSPQKESLRSTSRKEALFPFECRQAKISYTGSLMAEICFRYDEDEYVVRDR 120

Query: 453  VSFGSLPIMLKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPM 632
              FG  PIML SK CHLRGAD  QL+ YKE ++EMGGYFILNG+ER+ R +I  KRN P 
Sbjct: 121  YEFGEFPIMLMSKLCHLRGADCRQLLKYKESTSEMGGYFILNGIERVFRCVIAPKRNHPT 180

Query: 633  SVIRHTFRERQEGFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGV 812
             ++R++F  R+EG++DKAV IRCVRDDQSSV+ +LYYL+NGSAR GFWI  +E+LLPVGV
Sbjct: 181  GMVRNSFCGRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGAREYLLPVGV 240

Query: 813  VLKALIDTNDLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCL 992
            VLKAL +TND EIY +LTC YNE Y  G GA+GTQL+ ER +IILDEVRDL L T  QC 
Sbjct: 241  VLKALTETNDEEIYENLTCCYNERYGRGDGAIGTQLIRERSKIILDEVRDLGLFTRDQCR 300

Query: 993  QHIGEYFQPVMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTA 1172
            +++GE FQP + GLE +S+  V  +VLK+YIFVHL N+DDKFNLLIF++QKLF+LVD T+
Sbjct: 301  KYLGERFQPALDGLEKESYPTVAEAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTS 360

Query: 1173 TPDNLDALQNQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKK 1352
             PDN D+LQNQE+L+PGHLITIYLK+KL+EWL K + L++DE   + K F F ++A VKK
Sbjct: 361  LPDNPDSLQNQEILVPGHLITIYLKEKLEEWLRKCKSLIEDEF-NRSKKFSFETIADVKK 419

Query: 1353 VLDKNPSRNVGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGA 1532
            +++KNP R++G +IE +LK+GRL TQSGLDLQQ  G TV AERLNFLRF+S FR+VHRGA
Sbjct: 420  IINKNPPRSIGMSIETLLKSGRLNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA 479

Query: 1533 SFAGQRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKI 1712
            SFAG R T+VRKLLPE+WGFLCPVHTPDGEPCGLLNHMT TCRITS FDS GN+++  KI
Sbjct: 480  SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSQFDSNGNIRDFLKI 539

Query: 1713 RLSILSVLTGIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFP 1892
            R S++ VL G+GM PSLPKLVRAGPP+ ++VLLDG V+GSLSS LV + V++LRRLK+  
Sbjct: 540  RKSVVDVLVGVGMVPSLPKLVRAGPPKVITVLLDGQVVGSLSSNLVTEVVAYLRRLKVEA 599

Query: 1893 FSGIPEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAY 2072
             S IPEDLEVGYVP S GG+YPGLYL + PSRF+RPV+N SVP+D   NIEL+GPFEQ +
Sbjct: 600  PSVIPEDLEVGYVPTSMGGSYPGLYLASCPSRFIRPVKNNSVPSD---NIELVGPFEQVF 656

Query: 2073 MEIRCPDGGNGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMA 2252
            MEI CPDGGNGGR +   ATHEEIHPTGI SVVANLTP+SDHNQSPRNMYQCQMAKQTMA
Sbjct: 657  MEISCPDGGNGGRNNSSTATHEEIHPTGIISVVANLTPWSDHNQSPRNMYQCQMAKQTMA 716

Query: 2253 FSSQAIQFRADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAM 2432
            +S+QA+QFRADQK+YHLQTPQ+P+VRT  YT Y IDE PTGTNAIVAVLA+TG+DMEDAM
Sbjct: 717  YSTQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAM 776

Query: 2433 ILNKSSVERGMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVG 2612
            ILNKSSVERGM HG IYQ ET+DL +QR  SD   + F RS +DK+ HS IDADGLPY+G
Sbjct: 777  ILNKSSVERGMCHGQIYQTETVDLSDQRSRSDNGNQSFRRSKVDKSAHSCIDADGLPYIG 836

Query: 2613 QMLRPNEPYCSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNP 2792
            Q + PNEPYCSIY+ V +S K    KG++PVIVD+VSVD ++ KK PQK NIRFR  RNP
Sbjct: 837  QKIYPNEPYCSIYDGVTNSIKTMKRKGTDPVIVDFVSVDMKS-KKHPQKANIRFRHARNP 895

Query: 2793 VIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAK 2972
            +IGDKFSSRHGQKGVCSQLWPDIDMPF+GVTGMRPDLIINPHAFPSRMTI MLLESIAAK
Sbjct: 896  IIGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAK 955

Query: 2973 GGSLNGKFVDATPFPGAVLKAD-EESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGT 3149
            GGSL G+FVDATPF  AV K + EE S S   VD+LG +L   GFNY+G+E LYSG LG 
Sbjct: 956  GGSLRGEFVDATPFRDAVKKPNGEEESKSSLLVDDLGSMLKEKGFNYYGTETLYSGYLGV 1015

Query: 3150 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSML 3329
            EL CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+TRQP           FGEMERD+ML
Sbjct: 1016 ELKCEIFMGPVYYQRLRHMVSDKFQVRSTGLVDQLTRQPIKGRKRGGGIRFGEMERDAML 1075

Query: 3330 AHGAAYLLHDRLHTCSDHHIADVCSLCGSILTATIIQ-PPKKAVREIGGLPPGSIPKKVI 3506
            AHGA+YLLHDRLHT SDHHIADVCSLCGS+LT++++    KK +++IG LPPG  PKKV 
Sbjct: 1076 AHGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQDIGKLPPGRTPKKVT 1135

Query: 3507 CHACKTSKGMETVAMPYVFKYLAAELAAMNVKMTLRLS 3620
            C +CKTSKGMETVAMPYVF+YLAAELAAMN+K+TL+LS
Sbjct: 1136 CDSCKTSKGMETVAMPYVFRYLAAELAAMNIKVTLQLS 1173


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
            lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
            ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score = 1563 bits (4047), Expect = 0.0
 Identities = 777/1184 (65%), Positives = 929/1184 (78%), Gaps = 10/1184 (0%)
 Frame = +3

Query: 102  MGVIEKSKAPQSQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLR 281
            M V  K     +  D   L +L   HIESFDY+ + GL  + + I PV +YDP +   L 
Sbjct: 1    MVVNAKDSTVPTMEDLKELHNLVTHHIESFDYMTQKGLDVMFNRIKPVSVYDPNTENELS 60

Query: 282  -------ISFGDHELFPPQKDRGHKTFRSA-LYPCECRQAGSTYAGKFLLELCFQYENNF 437
                   +   +  +F PQK+    T R   L P ECRQA  +Y G F+ ++CF+Y +  
Sbjct: 61   NILFFMILWLENPVVFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGV 120

Query: 438  PIRERVSFGSLPIMLKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQK 617
             +R+R  FG  PIML SK C LRGAD  +L+  KE ++EMGGYFILNG+ER+ R +I  K
Sbjct: 121  VVRDRFDFGQFPIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPK 180

Query: 618  RNFPMSVIRHTFRERQEGFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFL 797
            RN P S+IR++FR+R+EG+T+KAV  RCVRDDQSSV+ +LYYL+NGSAR GFWI G+E+L
Sbjct: 181  RNHPTSMIRNSFRDRKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYL 240

Query: 798  LPVGVVLKALIDTNDLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLST 977
            LPVG+VLKAL +T D EIY SL C Y+E Y  G GA+GTQL+ ER +IILDEVRDL L T
Sbjct: 241  LPVGLVLKALTNTCDEEIYESLNCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFT 300

Query: 978  HLQCLQHIGEYFQPVMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFAL 1157
              QC +H+G++FQPV+ GLE +SH  V  +VL+DY+FVHL N+ DKFNLLIF++QKL++L
Sbjct: 301  REQCRKHLGQHFQPVLDGLEKESHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 360

Query: 1158 VDHTATPDNLDALQNQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSL 1337
            VD T+ PDN D+LQNQE+L+PGH+ITIYLK+KL++WL K + LL+DEL      F F SL
Sbjct: 361  VDQTSLPDNPDSLQNQEILVPGHVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESL 420

Query: 1338 AHVKKVLDKNPSRNVGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRS 1517
            A VKK+++KNP R++GT+IE +LKTG L TQSGLDLQQ  G TV AERLNFLRF+S FR+
Sbjct: 421  ADVKKLINKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRA 480

Query: 1518 VHRGASFAGQRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVK 1697
            VHRGASFAG R T+VRKLLPE+WGFLCPVHTPDG PCGLLNHMT T RITS FDS+GN++
Sbjct: 481  VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIR 540

Query: 1698 EIFKIRLSILSVLTGIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRR 1877
            +  KIR S++ VLTG GM  SLPKLVRAGPP+ + VLLDG V+G+LSS LV K VS+LRR
Sbjct: 541  DFLKIRKSVVEVLTGAGMVSSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRR 600

Query: 1878 LKLFPFSGIPEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGP 2057
            LK+   S IPEDLEVGYVP+S GG+YPGLYL + P+RF+RPV+NIS+P++   NIELIGP
Sbjct: 601  LKVEAPSVIPEDLEVGYVPISMGGSYPGLYLASCPARFIRPVKNISIPSE---NIELIGP 657

Query: 2058 FEQAYMEIRCPDGGNGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMA 2237
            FEQ +MEI CPDGGNGGR +  PATHEEIHPTG+ SVVANLTP+SDHNQSPRNMYQCQMA
Sbjct: 658  FEQVFMEISCPDGGNGGRNNSSPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMA 717

Query: 2238 KQTMAFSSQAIQFRADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYD 2417
            KQTMA+S+QA+QFRADQK+YHLQTPQ+P+VRT  YT Y IDE PTGTNAIVAVLA+TG+D
Sbjct: 718  KQTMAYSTQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFD 777

Query: 2418 MEDAMILNKSSVERGMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADG 2597
            MEDAMILNKSSVERGM HG IYQ E IDL +Q    D   + F RS  DK+ HS IDADG
Sbjct: 778  MEDAMILNKSSVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSRIDADG 837

Query: 2598 LPYVGQMLRPNEPYCSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFR 2777
            LPYVGQ + P+EPYC IY+ V    +    KG++PVIVD+VSVD ++ KK PQK NIRFR
Sbjct: 838  LPYVGQKIYPDEPYCRIYDEVTGKQRLMKGKGTDPVIVDFVSVDMKS-KKHPQKANIRFR 896

Query: 2778 RPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLE 2957
              RNP+IGDKFSSRHGQKGVCSQLWPDI+MPF+GVTGMRPDLIINPHAFPSRMTI MLLE
Sbjct: 897  HARNPIIGDKFSSRHGQKGVCSQLWPDIEMPFNGVTGMRPDLIINPHAFPSRMTIAMLLE 956

Query: 2958 SIAAKGGSLNGKFVDATPFPGAVLKAD-EESSLSDSRVDELGPLLASYGFNYHGSEVLYS 3134
            SIAAKGGSL+GKFVDATPF  AV K + E+ S S   VD+LG +L   GFNY+G+E LYS
Sbjct: 957  SIAAKGGSLHGKFVDATPFRDAVKKTNGEKESKSSLLVDDLGSMLKEKGFNYYGTETLYS 1016

Query: 3135 GVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 3314
            G LG EL CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+T QP           FGEME
Sbjct: 1017 GSLGVELKCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEME 1076

Query: 3315 RDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTATIIQ-PPKKAVREIGGLPPGSI 3491
            RDS+LAHGA+YLLHDRLHT SDHHIADVCSLCGS+LT++++    KK ++  G LPPG  
Sbjct: 1077 RDSLLAHGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIKVNGKLPPGRT 1136

Query: 3492 PKKVICHACKTSKGMETVAMPYVFKYLAAELAAMNVKMTLRLSN 3623
            PKKV CH+C TSKGMETVAMPYVF+YLAAELA+MN+KMTL+LS+
Sbjct: 1137 PKKVTCHSCGTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSD 1180


>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
            gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
            [Arabidopsis thaliana]
          Length = 1178

 Score = 1560 bits (4039), Expect = 0.0
 Identities = 776/1177 (65%), Positives = 930/1177 (79%), Gaps = 3/1177 (0%)
 Frame = +3

Query: 102  MGVIEKSKAPQSQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLR 281
            M V  K     +  D+  L +L   HIESFDY+   GL  + + I PV +YDP +   L 
Sbjct: 1    MVVNAKDSTVPTMEDFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELS 60

Query: 282  ISFGDHELFPPQKDRGHKTFRSA-LYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVS 458
            I   +  +F PQK+    T R   L P ECRQA  +Y G F+ ++CF+Y +   +R++  
Sbjct: 61   IWLENPLVFAPQKESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDKFD 120

Query: 459  FGSLPIMLKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSV 638
            FG  PIML SK C L+GAD  +L+  KE ++EMGGYFILNG+ER+ R +I  KRN P S+
Sbjct: 121  FGQFPIMLMSKLCSLKGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSM 180

Query: 639  IRHTFRERQEGFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVL 818
            IR++FR+R+EG++ KAV  RCVRDDQSSV+ +LYYL+NGSAR GFWI G+E+LLPVG+VL
Sbjct: 181  IRNSFRDRKEGYSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVL 240

Query: 819  KALIDTNDLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQH 998
            KAL ++ D EIY SL C Y+E Y  G GA+GTQLV ER +IILDEVRDL L T  QC +H
Sbjct: 241  KALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKH 300

Query: 999  IGEYFQPVMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATP 1178
            +G++FQPV+ G++ +S S V  +VL+DY+FVHL N+ DKFNLLIF++QKL++LVD T+ P
Sbjct: 301  LGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 360

Query: 1179 DNLDALQNQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKGKSFDFFSLAHVKKVL 1358
            DN D+LQNQE+L+PGH+ITIYLK+KL+EWL K + LL+DEL      F F SLA VKK++
Sbjct: 361  DNPDSLQNQEILVPGHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKKLI 420

Query: 1359 DKNPSRNVGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGASF 1538
            +KNP R++GT+IE +LKTG L TQSGLDLQQ  G TV AERLNFLRF+S FR+VHRGASF
Sbjct: 421  NKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASF 480

Query: 1539 AGQRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKIRL 1718
            AG R T+VRKLLPE+WGFLCPVHTPDG PCGLLNHMT T RITS FDS+GN+++  KIR 
Sbjct: 481  AGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRK 540

Query: 1719 SILSVLTGIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFPFS 1898
            S++ VLTG GM PSLPKLVRAGPP+ + VLLDG V+G+LSS LV K VS++RRLK+   S
Sbjct: 541  SVVDVLTGAGMVPSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEAPS 600

Query: 1899 GIPEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAYME 2078
             IPEDLEVGYVP S GG+YPGLYL + P+RF+RPV+NIS+P+D   NIELIGPFEQ +ME
Sbjct: 601  VIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSD---NIELIGPFEQVFME 657

Query: 2079 IRCPDGGNGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFS 2258
            I CPDGGNGGR +   ATHEEIHPTG+ SVVANLTP+SDHNQSPRNMYQCQMAKQTMA+S
Sbjct: 658  ISCPDGGNGGRNNSSLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYS 717

Query: 2259 SQAIQFRADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAMIL 2438
            +QA+QFRADQK+YHLQTPQ+P+VRT  YT Y IDE PTGTNAIVAVLA+TG+DMEDAMIL
Sbjct: 718  TQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMIL 777

Query: 2439 NKSSVERGMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVGQM 2618
            NKSSVERGM HG IYQ E IDL +Q    D   + F RS  +K  H  IDADGLP VGQ 
Sbjct: 778  NKSSVERGMCHGQIYQTENIDLSDQNSRFDSGSKSFRRST-NKAEHFRIDADGLPSVGQK 836

Query: 2619 LRPNEPYCSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNPVI 2798
            L P+EPYCSIY+ V + T+    KG++PVIVD+VSVD ++ KK PQ+ NIRFR  RNP+I
Sbjct: 837  LYPDEPYCSIYDEVTNKTRHMKRKGTDPVIVDFVSVDMKS-KKHPQRANIRFRHARNPII 895

Query: 2799 GDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGG 2978
            GDKFSSRHGQKGVCSQLWPDIDMPF+GVTGMRPDLIINPHAFPSRMTI MLLESIAAKGG
Sbjct: 896  GDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGG 955

Query: 2979 SLNGKFVDATPFPGAVLKAD-EESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGTEL 3155
            SL+GKFVDATPF  AV K + EE S S   VD+LG +L   GFN++G+E LYSG LG EL
Sbjct: 956  SLHGKFVDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKEKGFNHYGTETLYSGYLGVEL 1015

Query: 3156 TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSMLAH 3335
             CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+T QP           FGEMERDS+LAH
Sbjct: 1016 KCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAH 1075

Query: 3336 GAAYLLHDRLHTCSDHHIADVCSLCGSILTATIIQ-PPKKAVREIGGLPPGSIPKKVICH 3512
            GA+YLLHDRLHT SDHHIADVCSLCGS+LT++++    KK ++EIG LPPG  PKKV C+
Sbjct: 1076 GASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCY 1135

Query: 3513 ACKTSKGMETVAMPYVFKYLAAELAAMNVKMTLRLSN 3623
            +CKTSKGMETVAMPYVF+YLAAELA+MN+KMTL+LS+
Sbjct: 1136 SCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSD 1172


>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
            gi|482575323|gb|EOA39510.1| hypothetical protein
            CARUB_v10008127mg [Capsella rubella]
          Length = 1171

 Score = 1548 bits (4008), Expect = 0.0
 Identities = 772/1179 (65%), Positives = 923/1179 (78%), Gaps = 5/1179 (0%)
 Frame = +3

Query: 102  MGVIEKSKAPQSQSDYDSLRDLFKPHIESFDYLVEAGLATLLSNIHPVEIYDPQSRKTLR 281
            M V  K     +  D+  L +L   HIESFDY+ + GL  + + I PV            
Sbjct: 1    MVVNAKDSTVPNIEDFKELHNLVTHHIESFDYMTDKGLEVMFNRIKPVT----------- 49

Query: 282  ISFGDHELFPPQKDRGHKTFRSA-LYPCECRQAGSTYAGKFLLELCFQYENNFPIRERVS 458
                +  +F PQK+    T R   L+P ECRQA  +Y G F+ ++CF+Y     +R++  
Sbjct: 50   ----NPVVFAPQKESFSSTSRKEPLFPFECRQAKISYTGTFMADVCFKYNEGVVVRDKFD 105

Query: 459  FGSLPIMLKSKACHLRGADPVQLISYKEESTEMGGYFILNGLERLVRLLIMQKRNFPMSV 638
            FG  PIML SK C LRGAD  +L+  KE ++EMGGYF+LNG+ER+ R +I  KRN P S+
Sbjct: 106  FGQFPIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSM 165

Query: 639  IRHTFRERQEGFTDKAVTIRCVRDDQSSVSNRLYYLQNGSARFGFWIRGKEFLLPVGVVL 818
            IR++FR+R+EG++DKAV IRCVRDDQSSV+ +LYYL+NGSAR GFWI G+E+LLPVG+VL
Sbjct: 166  IRNSFRDRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVL 225

Query: 819  KALIDTNDLEIYASLTCSYNEEYQGGKGAVGTQLVGERVRIILDEVRDLSLSTHLQCLQH 998
            KAL  TND E+Y SL C YNE Y  G GA+GTQLV ER ++ILDEVRD+ L T  QC +H
Sbjct: 226  KALTKTNDEEVYKSLNCCYNENYGRGDGAIGTQLVRERAKVILDEVRDMGLFTREQCRKH 285

Query: 999  IGEYFQPVMVGLENKSHSYVGSSVLKDYIFVHLQNNDDKFNLLIFMVQKLFALVDHTATP 1178
            +GE+FQPV+ GLE +S+  V  +VL+DYIFVHL N+ DKFNLLIF++QKL++LVD T+ P
Sbjct: 286  LGEHFQPVLDGLEKESYPTVAEAVLRDYIFVHLDNDHDKFNLLIFLIQKLYSLVDQTSLP 345

Query: 1179 DNLDALQNQEVLLPGHLITIYLKDKLQEWLYKARRLLQDELQKKG--KSFDFFSLAHVKK 1352
            DN D+LQNQE+L+PGHLIT+YLK+KL+EWL K + LL+DEL        F F SLA VKK
Sbjct: 346  DNPDSLQNQEILVPGHLITVYLKEKLEEWLRKCKSLLKDELHNTSSKSKFSFESLADVKK 405

Query: 1353 VLDKNPSRNVGTAIENMLKTGRLITQSGLDLQQSGGMTVVAERLNFLRFISHFRSVHRGA 1532
            + +KNP R+VG +IE +LKTGR+ TQSGLDLQQ  G TV AERLNFLRF+S FR+VHRGA
Sbjct: 406  LFNKNPPRSVGMSIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA 465

Query: 1533 SFAGQRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRITSFFDSQGNVKEIFKI 1712
            SFAG R T+VRKLLPE+WGFLCPVHTPDGEPCGLLNHMT T RITS FDS+GN+++  KI
Sbjct: 466  SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFLKI 525

Query: 1713 RLSILSVLTGIGMTPSLPKLVRAGPPEALSVLLDGCVIGSLSSTLVEKAVSHLRRLKLFP 1892
            R S++ VL G GM  SLPKLV+A PPE + VLLDG V+G+LSS LV   VS+LRRLK+  
Sbjct: 526  RKSVVEVLIGAGMVSSLPKLVQAAPPEVIHVLLDGQVVGTLSSNLVTNVVSYLRRLKIEA 585

Query: 1893 FSGIPEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPTDESLNIELIGPFEQAY 2072
             S IPEDLEVGYVP S GG+YPGLYL + P+RF+RPV+NIS+P++   +IELIGPFEQ +
Sbjct: 586  PSVIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSE---SIELIGPFEQVF 642

Query: 2073 MEIRCPDGGNGGRRDGFPATHEEIHPTGIFSVVANLTPFSDHNQSPRNMYQCQMAKQTMA 2252
            MEI CPDGGNGGR +  PATHEEIHPTG+ SVVANLTP+SDHNQSPRNMYQCQMAKQTMA
Sbjct: 643  MEISCPDGGNGGRNNSCPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMA 702

Query: 2253 FSSQAIQFRADQKLYHLQTPQTPIVRTAAYTKYHIDEFPTGTNAIVAVLAYTGYDMEDAM 2432
            +S+QA+QFRADQK+YHLQTPQ+P+VRT  YT Y IDE PTGTNAIVAVLA+TG+DMEDAM
Sbjct: 703  YSTQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAM 762

Query: 2433 ILNKSSVERGMFHGTIYQVETIDLEEQREHSDQAQRLFARSNIDKTMHSSIDADGLPYVG 2612
            ILNKSSVERGM HG IYQ E IDL +Q    D   + F RS  DK+ HS+IDADGLPYVG
Sbjct: 763  ILNKSSVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSTIDADGLPYVG 822

Query: 2613 QMLRPNEPYCSIYNTVNSSTKPFALKGSEPVIVDYVSVDARNQKKPPQKVNIRFRRPRNP 2792
            Q + P+EPY SIY+ V +  +    KG++PVIVD+VSVD ++ KK PQK NIRFR  RNP
Sbjct: 823  QKIYPDEPYYSIYDEVTNRIRTIKRKGTDPVIVDFVSVDMKS-KKHPQKANIRFRHARNP 881

Query: 2793 VIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAK 2972
            +IGDKFSSRHGQKGVCSQLWPDIDMPF+GVTGMRPDLIINPHAFPSRMTI MLLESIAAK
Sbjct: 882  IIGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAK 941

Query: 2973 GGSLNGKFVDATPFPGAVLKAD-EESSLSDSRVDELGPLLASYGFNYHGSEVLYSGVLGT 3149
            GGSL+GKFVDATPF  AV+ A+ E+   S   VD+LG +L   GFNY+G+E LYSG+LG 
Sbjct: 942  GGSLHGKFVDATPFRNAVINANGEKKRKSSLLVDDLGSMLKEKGFNYYGTEKLYSGILGV 1001

Query: 3150 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSML 3329
            EL CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+T QP           FGEMERDS+L
Sbjct: 1002 ELECEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLL 1061

Query: 3330 AHGAAYLLHDRLHTCSDHHIADVCSLCGSILTATIIQ-PPKKAVREIGGLPPGSIPKKVI 3506
            AHGA+YLLHDRLHT SDHHIADVCSLCGS+LT++I     KK ++  G LPPG  PKKV 
Sbjct: 1062 AHGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSIANVQQKKLIQVTGKLPPGRTPKKVT 1121

Query: 3507 CHACKTSKGMETVAMPYVFKYLAAELAAMNVKMTLRLSN 3623
            C++CKTSKGMETVAMPYVF+YLAAELA+MN+KMTL+LS+
Sbjct: 1122 CYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLKLSD 1160