BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00014155
         (2251 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15459.3| unnamed protein product [Vitis vinifera]              912   0.0  
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   912   0.0  
ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prun...   907   0.0  
gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitat...   902   0.0  
ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theob...   888   0.0  
ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron sp...   879   0.0  
ref|XP_002317913.2| hypothetical protein POPTR_0012s05260g [Popu...   860   0.0  
ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata] g...   843   0.0  
ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [A...   840   0.0  
ref|XP_002532154.1| conserved hypothetical protein [Ricinus comm...   835   0.0  
ref|NP_188468.1| CRS1 / YhbY domain-containing protein EMB1865 [...   833   0.0  
ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron sp...   833   0.0  
ref|XP_006406610.1| hypothetical protein EUTSA_v10020034mg [Eutr...   833   0.0  
ref|XP_004235759.1| PREDICTED: chloroplastic group IIA intron sp...   832   0.0  
ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citr...   830   0.0  
ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citr...   830   0.0  
ref|XP_006296939.1| hypothetical protein CARUB_v10012930mg, part...   829   0.0  
ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron sp...   828   0.0  
ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron sp...   826   0.0  
ref|XP_003530015.2| PREDICTED: chloroplastic group IIA intron sp...   823   0.0  

>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score =  912 bits (2358), Expect = 0.0
 Identities = 478/720 (66%), Positives = 550/720 (76%), Gaps = 5/720 (0%)
 Frame = +1

Query: 37   RNARRGNYSSHKSRAPSAPWLNKWPS----VEKEEKNVDSEKRVRAEDRVESRYFDGDKG 204
            +N+R+ + ++  S   S  W+NKWPS    +E E K +DS+ R    D  ESRYFDG  G
Sbjct: 61   QNSRKSSNTNPNSSTKS--WINKWPSPNPSIESEHKGIDSKGR----DGTESRYFDGRSG 114

Query: 205  RSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEENLGDLLQRNWSRP 384
             SAIERIV RLRNL                  E++  D  +P TG+E LGDLLQR+W RP
Sbjct: 115  TSAIERIVLRLRNLGLGSDDEDKNE------GEVESGDT-MPVTGDEKLGDLLQRDWVRP 167

Query: 385  DSVVLDYEDDDRMLLPWXXXXXXXXXXXXXXXLKKKRVKAPSLAELTLEDVXXXXXXXXX 564
            DS++++ ED+D M+LPW               LK++ V+AP+LAELT+ED          
Sbjct: 168  DSMLIEDEDEDDMILPWERGEERQEEEGDGR-LKRRAVRAPTLAELTIEDEELRRLRRLG 226

Query: 565  XXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKAHEIVERRTGGLVI 744
                  IN+PKAG+TQ +L KIH+KWRK ELVRLKFHE LA DMK AHEIVERRTGGLV 
Sbjct: 227  MTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVT 286

Query: 745  WRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVEDDKISNSIPEKNQP 924
            WRSGSVMVV+RG+NYE P  + QPV+   +  FVPDVSS D+ A+ +D       EK   
Sbjct: 287  WRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDNPAMRNDNNGGPTLEKGSL 345

Query: 925  TFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPPFVPGYKTPFRLLP 1104
              +NP   ENMTEEEAE+NSLLDGLGPRF+DWWGTG+LPVD DLLP  +PGYKTP R+LP
Sbjct: 346  PVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILP 405

Query: 1105 TGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQ 1284
            TGMR RLTNAEMTNLRKL+KSLPCHFALGRNRNHQGLA+AI+K+WEKS+VVKIAVK GIQ
Sbjct: 406  TGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQ 465

Query: 1285 NTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDIEEE 1464
            NTNNKLMAEE+K L GG LLLRNKYYI+IYRGKDFLPTSVAAAL+ER+ELTK +Q +EE+
Sbjct: 466  NTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEK 525

Query: 1465 VRI-GAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASRAKTARIVR 1641
            VR  GA  I + E   G+  AGTLAEF EAQARWGREIS EEHE M EEASRAK+AR+V+
Sbjct: 526  VRTGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVK 585

Query: 1642 KIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPL 1821
            +IEH                   E SM+PAGPSDDQETITDEERFMFRR+GLRMKAYL L
Sbjct: 586  RIEHKLALAQAKKLRAERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLL 645

Query: 1822 GIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGY 2001
            G+RGVFDGVIENMHLHWKHRELVKLISKQKTL+F++DTARLLEYESGGILVAIERVPKGY
Sbjct: 646  GVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGY 705

Query: 2002 ALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEINE 2181
            ALIYYRGKNY+RP+S+RPRNLLTKAKALKRSVAMQRHEALSQHISELERTIE MK EI +
Sbjct: 706  ALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGD 765


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  912 bits (2358), Expect = 0.0
 Identities = 478/720 (66%), Positives = 550/720 (76%), Gaps = 5/720 (0%)
 Frame = +1

Query: 37   RNARRGNYSSHKSRAPSAPWLNKWPS----VEKEEKNVDSEKRVRAEDRVESRYFDGDKG 204
            +N+R+ + ++  S   S  W+NKWPS    +E E K +DS+ R    D  ESRYFDG  G
Sbjct: 61   QNSRKSSNTNPNSSTKS--WINKWPSPNPSIESEHKGIDSKGR----DGTESRYFDGRSG 114

Query: 205  RSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEENLGDLLQRNWSRP 384
             SAIERIV RLRNL                  E++  D  +P TG+E LGDLLQR+W RP
Sbjct: 115  TSAIERIVLRLRNLGLGSDDEDKNE------GEVESGDT-MPVTGDEKLGDLLQRDWVRP 167

Query: 385  DSVVLDYEDDDRMLLPWXXXXXXXXXXXXXXXLKKKRVKAPSLAELTLEDVXXXXXXXXX 564
            DS++++ ED+D M+LPW               LK++ V+AP+LAELT+ED          
Sbjct: 168  DSMLIEDEDEDDMILPWERGEERQEEEGDGR-LKRRAVRAPTLAELTIEDEELRRLRRLG 226

Query: 565  XXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKAHEIVERRTGGLVI 744
                  IN+PKAG+TQ +L KIH+KWRK ELVRLKFHE LA DMK AHEIVERRTGGLV 
Sbjct: 227  MTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVT 286

Query: 745  WRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVEDDKISNSIPEKNQP 924
            WRSGSVMVV+RG+NYE P  + QPV+   +  FVPDVSS D+ A+ +D       EK   
Sbjct: 287  WRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDNPAMRNDNNGGPTLEKGSL 345

Query: 925  TFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPPFVPGYKTPFRLLP 1104
              +NP   ENMTEEEAE+NSLLDGLGPRF+DWWGTG+LPVD DLLP  +PGYKTP R+LP
Sbjct: 346  PVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILP 405

Query: 1105 TGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQ 1284
            TGMR RLTNAEMTNLRKL+KSLPCHFALGRNRNHQGLA+AI+K+WEKS+VVKIAVK GIQ
Sbjct: 406  TGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQ 465

Query: 1285 NTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDIEEE 1464
            NTNNKLMAEE+K L GG LLLRNKYYI+IYRGKDFLPTSVAAAL+ER+ELTK +Q +EE+
Sbjct: 466  NTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEK 525

Query: 1465 VRI-GAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASRAKTARIVR 1641
            VR  GA  I + E   G+  AGTLAEF EAQARWGREIS EEHE M EEASRAK+AR+V+
Sbjct: 526  VRTGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVK 585

Query: 1642 KIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPL 1821
            +IEH                   E SM+PAGPSDDQETITDEERFMFRR+GLRMKAYL L
Sbjct: 586  RIEHKLALAQAKKLRPERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLL 645

Query: 1822 GIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGY 2001
            G+RGVFDGVIENMHLHWKHRELVKLISKQKTL+F++DTARLLEYESGGILVAIERVPKGY
Sbjct: 646  GVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGY 705

Query: 2002 ALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEINE 2181
            ALIYYRGKNY+RP+S+RPRNLLTKAKALKRSVAMQRHEALSQHISELERTIE MK EI +
Sbjct: 706  ALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGD 765


>ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prunus persica]
            gi|462407043|gb|EMJ12507.1| hypothetical protein
            PRUPE_ppa001468mg [Prunus persica]
          Length = 820

 Score =  907 bits (2344), Expect = 0.0
 Identities = 481/724 (66%), Positives = 546/724 (75%), Gaps = 11/724 (1%)
 Frame = +1

Query: 64   SHKSRAPSAPWLNKWPSVEK---------EEKNVDSEKRVRAEDRVESRYFDGDKGRSAI 216
            SHKS+ PSAPWLN WP              EK  +S  R +A     +RYFD +KG+SAI
Sbjct: 61   SHKSKPPSAPWLNTWPPRNSPAELPCQKVNEKVNESHGRDQAVKANTTRYFDKNKGQSAI 120

Query: 217  ERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPC-TGEENLGDLLQRNWSRPDSV 393
            ERIV RLRNL                   +DG+D+  P  +GEE LGDLLQR W RPD V
Sbjct: 121  ERIVLRLRNLGLGSDDEEEDDGLG-----LDGQDSMQPAESGEEKLGDLLQREWVRPDYV 175

Query: 394  VLDYEDDDRMLLPWXXXXXXXXXXXXXXXLKKKRVKAPSLAELTLEDVXXXXXXXXXXXX 573
            + + + +D + LPW               L+K+RVKAPSLAELT+ED             
Sbjct: 176  LAEQKSNDEVALPWEKEDEISEEEEVKG-LRKRRVKAPSLAELTIEDEELKRLRRMGMVL 234

Query: 574  XXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKAHEIVERRTGGLVIWRS 753
               I++PKAG+TQ +LEKIHD WRK ELVRLKFHE LA DMK AHEIVERRTGGLV+WRS
Sbjct: 235  RERISVPKAGITQAVLEKIHDTWRKEELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRS 294

Query: 754  GSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVEDDKISNSIPEKNQPTFQ 933
            GSVMVVYRGSNY+ PS ++Q V+      F+PDVSSA+  A      + S P+ N+   +
Sbjct: 295  GSVMVVYRGSNYKGPS-KSQTVDREGGALFIPDVSSAETSATRSGNDATSGPDNNEKAVK 353

Query: 934  NPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPPFVPGYKTPFRLLPTGM 1113
             P    NMTEEEAEFNSLLD LGPRF++WWGTG+LPVDADLLP  +PGYKTPFRLLPTGM
Sbjct: 354  IPAHLPNMTEEEAEFNSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTPFRLLPTGM 413

Query: 1114 RSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQNTN 1293
            RSRLTNAEMTNLRKL+KSLPCHFALGRNRNHQGLASAI+K+WEKS V KIAVKRGIQNTN
Sbjct: 414  RSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAKIAVKRGIQNTN 473

Query: 1294 NKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDIEEEVRI 1473
            NKLMAEELK L GG LLLRNKYYI+ YRGKDFLPTSVAAALAERQELTK+VQD+EE++RI
Sbjct: 474  NKLMAEELKTLTGGVLLLRNKYYIVFYRGKDFLPTSVAAALAERQELTKQVQDVEEKMRI 533

Query: 1474 GAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASRAKTARIVRKIEH 1653
             A+  A+S   EG+A AGTLAEF EAQARWGREIS EE E M EE S+AK AR+V++IEH
Sbjct: 534  KAIDAASSGAEEGQALAGTLAEFYEAQARWGREISAEEREKMIEEDSKAKNARLVKRIEH 593

Query: 1654 XXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRG 1833
                               E SM+PAGP  DQET+TDEER MFRRVGLRMKAYLPLGIRG
Sbjct: 594  KLGVAQAKKLRAEKLLSKIESSMLPAGPDYDQETVTDEERVMFRRVGLRMKAYLPLGIRG 653

Query: 1834 VFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALIY 2013
            VFDGV+ENMHLHWKHRELVKLISKQKTL+F++DTARLLE+ESGGILVAIERVPKGYALIY
Sbjct: 654  VFDGVVENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAIERVPKGYALIY 713

Query: 2014 YRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEIN-EDDL 2190
            YRGKNYQRPI++RPRNLLTKAKALKRSVA+QRHEALSQHISELE+TIE M SEI   +D+
Sbjct: 714  YRGKNYQRPITLRPRNLLTKAKALKRSVAIQRHEALSQHISELEKTIEQMSSEIGVSEDI 773

Query: 2191 YRES 2202
              ES
Sbjct: 774  ADES 777


>gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 838

 Score =  902 bits (2331), Expect = 0.0
 Identities = 474/715 (66%), Positives = 540/715 (75%), Gaps = 10/715 (1%)
 Frame = +1

Query: 61   SSHKSRAPSAPWLNKWPSVEKEEKNV-DSEKRVRAEDRVESRYFDGDKGRSAIERIVFRL 237
            SSH+ + PSAPWLNKWP VE  ++ V +S  R R +      Y D D+GR+AIERIV RL
Sbjct: 73   SSHRHKPPSAPWLNKWPPVESSDRKVAESTDRDRTDRPDTVGYVDRDRGRNAIERIVLRL 132

Query: 238  RNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEENLGDLLQRNWSRPDSVVLDYEDDD 417
            RNL               +   +DG+DA +P TGEE LGDLL+R W RPD V+ + E  D
Sbjct: 133  RNLGLGSDDEDEDDKEGDI--GLDGQDA-MPVTGEEKLGDLLRREWIRPDFVLEEEESKD 189

Query: 418  RMLLPWXXXXXXXXXXXXXXXLKKKRVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIPK 597
             + LPW               L+K+RV AP+LAELT+ED                I++PK
Sbjct: 190  DLTLPWEREEEEKGVDEGTRELRKRRVNAPTLAELTIEDEELRRLRRMGMFLRDRISVPK 249

Query: 598  AGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKAHEIVERRTGGLVIWRSGSVMVVYR 777
            AG+TQ +LEKIHDKWRK ELVRLKFHE LA DMK AHEIVERRTGGLV WRSGSVMVVYR
Sbjct: 250  AGLTQAVLEKIHDKWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVTWRSGSVMVVYR 309

Query: 778  GSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVEDDKISNSIPEKNQPTFQNPDPTENM 957
            GSNYE P  +TQPVN   +  F+PDVSSA++          S  EK++   +NP   +NM
Sbjct: 310  GSNYEGPP-KTQPVNKERDALFIPDVSSAENFLTRSGDSLTSNAEKSETPVRNPVSVQNM 368

Query: 958  TEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPPFVPGYKTPFRLLPTGMRSRLTNAE 1137
            TEEEAEFNSLLD LGPRF +WWGTG++PVDADLLPP +PGYKTPFRLLPTGMRSRLTN E
Sbjct: 369  TEEEAEFNSLLDDLGPRFDEWWGTGVIPVDADLLPPKIPGYKTPFRLLPTGMRSRLTNGE 428

Query: 1138 MTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAEEL 1317
            MTNLRK++KSLP HFALGRNRNHQGLA+AI+K+WEKSLV KIAVKRGIQNTNNKLMAEEL
Sbjct: 429  MTNLRKVAKSLPSHFALGRNRNHQGLAAAIIKLWEKSLVAKIAVKRGIQNTNNKLMAEEL 488

Query: 1318 KKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDIEEEVRI-------- 1473
            K L GG LLLRNKYYI+IYRGKDFLPT+VAA LAERQ+L K+VQD+EE+VR+        
Sbjct: 489  KNLTGGVLLLRNKYYIVIYRGKDFLPTTVAATLAERQKLAKQVQDLEEQVRVQDIEQKMQ 548

Query: 1474 -GAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASRAKTARIVRKIE 1650
              AV    S   EG+A AGTLAEF EAQARWGREI++EE E M EEA+ AK AR+V++IE
Sbjct: 549  KKAVDSVPSGEEEGQALAGTLAEFYEAQARWGREITSEEREKMIEEAAVAKHARLVKRIE 608

Query: 1651 HXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIR 1830
            H                   E SMVPAGP  DQETIT+EER MFRRVGLRMKAYLPLGIR
Sbjct: 609  HKAAVAQAKKLRAEKLLAKIEASMVPAGPDYDQETITEEERVMFRRVGLRMKAYLPLGIR 668

Query: 1831 GVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALI 2010
            GVFDGVIENMHLHWKHRELVKLI+KQKTL+F++DTARLLEYESGGILVAIERVPKG+ALI
Sbjct: 669  GVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIERVPKGFALI 728

Query: 2011 YYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEI 2175
            YYRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHISELE TIE M+ +I
Sbjct: 729  YYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISELETTIEQMQDKI 783


>ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
            gi|508773778|gb|EOY21034.1| CRS1 / YhbY domain-containing
            protein [Theobroma cacao]
          Length = 919

 Score =  888 bits (2295), Expect = 0.0
 Identities = 476/732 (65%), Positives = 541/732 (73%), Gaps = 22/732 (3%)
 Frame = +1

Query: 46   RRGNYSSHKSRAPSAPW----------------LNKWPSVEKEEKNVDSEKRVRAEDRVE 177
            R GN  S K    S PW                L  W S  ++    D + +      VE
Sbjct: 117  RTGNSPSSKFNRYSYPWDQEASVPPNSSASSSSLQAWSSPSQKVIQSDGDDKTD----VE 172

Query: 178  SRYFDGDKGRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDA-----EIPCTGE 342
            +RYFD DK +SAIERIV RLRNL                 +E +GED        P TGE
Sbjct: 173  TRYFDRDKSQSAIERIVLRLRNLGLGSD------------DEDEGEDETDQYNSTPVTGE 220

Query: 343  ENLGDLLQRNWSRPDSVVLDYEDDDRMLLPWXXXXXXXXXXXXXXX-LKKKRVKAPSLAE 519
            E LGDLL+R W RPD+++++ E ++ +L PW                +KK+RV+AP+LAE
Sbjct: 221  ERLGDLLKREWVRPDTMLIEREKEEAVL-PWERDEAEVEVVKEGVLGVKKRRVRAPTLAE 279

Query: 520  LTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMK 699
            LT+ED                IN+PKAG+TQ +LEKIHDKWRK ELVRLKFHE LA DMK
Sbjct: 280  LTIEDEELRRLRRMGMYLRERINVPKAGITQAVLEKIHDKWRKEELVRLKFHEVLATDMK 339

Query: 700  KAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAV 879
             AHEIVERRTGGLV+WRSGSVMVVYRGSNYE PS R+Q ++   E  F+PDVSSA +   
Sbjct: 340  TAHEIVERRTGGLVLWRSGSVMVVYRGSNYEGPS-RSQSIDREGEALFIPDVSSASNAVR 398

Query: 880  EDDKISNSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLL 1059
              +    S PEK +P    P+ +E+MTEEEAE+NSLLDG+GPRF++WWGTG+LPVDADLL
Sbjct: 399  GSETGKTSTPEKCEPVVVKPERSESMTEEEAEYNSLLDGVGPRFVEWWGTGVLPVDADLL 458

Query: 1060 PPFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVW 1239
            P  +PGYKTPFRLLP GMR RLTNAEMTNLRKL+KSLPCHFALGRNRNHQGLA+AI+K+W
Sbjct: 459  PQKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLW 518

Query: 1240 EKSLVVKIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALA 1419
            EKSLVVKIAVKRGIQNTNNKLMAEELK L GG LLLRNKY+I+IYRGKDFLPTSVAAALA
Sbjct: 519  EKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTSVAAALA 578

Query: 1420 ERQELTKKVQDIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENM 1599
            ERQELTK++QD+EE+VRI AV  A S   +G+A AGTLAEF EAQA WGREIS EE E M
Sbjct: 579  ERQELTKQIQDVEEKVRIRAVEPAQSGEDKGEAPAGTLAEFYEAQACWGREISAEEREKM 638

Query: 1600 QEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFM 1779
             EEAS+AK AR+V+++EH                   E SM+PA P  DQETITDEER M
Sbjct: 639  IEEASKAKHARLVKRVEHKLAVAQAKKLRAERLLAKIESSMIPAAPDYDQETITDEERVM 698

Query: 1780 FRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYES 1959
            FRRVGLRMK YLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTL+F++DTARLLE+ES
Sbjct: 699  FRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFES 758

Query: 1960 GGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISE 2139
            GGILVAIERVPKGYALIYYRGKNY RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHISE
Sbjct: 759  GGILVAIERVPKGYALIYYRGKNYHRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISE 818

Query: 2140 LERTIEGMKSEI 2175
            LERTIE MK EI
Sbjct: 819  LERTIEEMKKEI 830


>ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 820

 Score =  879 bits (2272), Expect = 0.0
 Identities = 471/740 (63%), Positives = 541/740 (73%), Gaps = 15/740 (2%)
 Frame = +1

Query: 1    RNTQQKGRSNTLRNARRGNYSSHKSRAPSAPWLNKWPSVEKEEKNVDSEK---RVRAEDR 171
            R T+  G  N    ++  + SS      +APWLNKWPS  +       +K   RV+  D 
Sbjct: 45   RTTEHGGNPNARHKSKPSSSSS------TAPWLNKWPSRGQAPAEPPRQKFSDRVKESDG 98

Query: 172  VE------SRYFDGDKGRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIP- 330
             E      +RY D DKG+SAIERIVFRLRNL                  E  G+  E+  
Sbjct: 99   REKPSSNAARYVDKDKGQSAIERIVFRLRNLGLGDDEE----------EEESGDGVELDS 148

Query: 331  ---CTGEENLGDLLQRNWSRPDSVVLDYEDDDRMLLPWXXXXXXXXXXXXXXXLKK-KRV 498
                +G E LGDLLQR W RPD ++ + + DD + LPW               ++K +R 
Sbjct: 149  MPAASGAEKLGDLLQREWVRPDYILAEEKGDDDVALPWEKEEEELSEDEEVKGMRKARRS 208

Query: 499  KAPSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHE 678
            KAPSLAELT+ED                I++PKAG+TQ +LEKIHDKWRK ELVRLKFHE
Sbjct: 209  KAPSLAELTIEDEELRRLRRLGMVLRERISVPKAGITQAVLEKIHDKWRKEELVRLKFHE 268

Query: 679  TLAQDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVS 858
             LA DMK AHEIVERRTGGLV+WRSGSVMVVYRGSNY+ PS +++P     +  F+PDVS
Sbjct: 269  VLAHDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYKGPS-KSEPAGRGGDALFIPDVS 327

Query: 859  SADHLAVEDDKISNSIPEKNQPTFQNPDPT-ENMTEEEAEFNSLLDGLGPRFLDWWGTGL 1035
            SA+         + S P+K +   + P+P  + MT+EEAEFNSLLD LGPRF+++WGTG+
Sbjct: 328  SAETSVTRGGNDATSAPDKTEQAVKIPEPLPKKMTDEEAEFNSLLDELGPRFVEYWGTGI 387

Query: 1036 LPVDADLLPPFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGL 1215
            LPVDADLLP  +PGYKTPFRLLPTGMRSRLTNAEMTNLRKL+KS+PCHFALGRNRNHQGL
Sbjct: 388  LPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSIPCHFALGRNRNHQGL 447

Query: 1216 ASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLP 1395
            ASAI+KVWEKS V KIAVKRGIQNTNNK+MAEELK L GG LLLRNKYYI+IYRGKDF+P
Sbjct: 448  ASAILKVWEKSSVAKIAVKRGIQNTNNKIMAEELKALTGGVLLLRNKYYIVIYRGKDFVP 507

Query: 1396 TSVAAALAERQELTKKVQDIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQARWGREI 1575
            T+VA ALAERQELTK+VQD+EE VRI  +  A S   EG+A AGTLAEF EAQARWGREI
Sbjct: 508  TTVATALAERQELTKQVQDVEEIVRIKPIDAAASSTEEGQALAGTLAEFYEAQARWGREI 567

Query: 1576 STEEHENMQEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQET 1755
            S EE + M EE S+AK AR  ++IEH                   E +M+PAGP  DQET
Sbjct: 568  SAEERKKMIEEDSKAKMARRAKRIEHKLGVAQAKKLRAESLLNKIESAMLPAGPDYDQET 627

Query: 1756 ITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDT 1935
            ITDEER MFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTL+F++D+
Sbjct: 628  ITDEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDS 687

Query: 1936 ARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHE 2115
            ARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPI++RPRNLLTKAKALKRSVAMQRHE
Sbjct: 688  ARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAMQRHE 747

Query: 2116 ALSQHISELERTIEGMKSEI 2175
            ALSQHI ELERTIE M+SEI
Sbjct: 748  ALSQHIEELERTIEQMRSEI 767


>ref|XP_002317913.2| hypothetical protein POPTR_0012s05260g [Populus trichocarpa]
            gi|550326426|gb|EEE96133.2| hypothetical protein
            POPTR_0012s05260g [Populus trichocarpa]
          Length = 807

 Score =  860 bits (2222), Expect = 0.0
 Identities = 457/711 (64%), Positives = 528/711 (74%), Gaps = 9/711 (1%)
 Frame = +1

Query: 70   KSRAPSAPWLNKW-PSVEKEEKNVDSEKRVRAEDRVESRYFDGDKGRSAIERIVFRLRNL 246
            K++  +  W++KW PS     KN  SE       + +  YF  DKG++AIERIV RLRNL
Sbjct: 56   KTQQKNPNWISKWKPSQNHSIKNPPSEV-----SQEKPHYFSNDKGQNAIERIVLRLRNL 110

Query: 247  XXXXXXXXXXXXXXXVLNEIDG-EDAEIP---CTGEENLGDLLQRNWSRPDSVVLDYE-- 408
                             +E++G E +EI     TGEE LGDLL+R W RPD+VV   +  
Sbjct: 111  GLGSDDE----------DELEGLEGSEINGGGLTGEERLGDLLKREWVRPDTVVFSNDEG 160

Query: 409  -DDDRMLLPWXXXXXXXXXXXXXXXL-KKKRVKAPSLAELTLEDVXXXXXXXXXXXXXXX 582
             D D  +LPW                 +K+R KAP+LAELT+ED                
Sbjct: 161  SDSDESVLPWEREERGAVEMEGGIESGRKRRGKAPTLAELTIEDEELRRLRRMGMFIRER 220

Query: 583  INIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKAHEIVERRTGGLVIWRSGSV 762
            I+IPKAG+T  +LE IHD+WRK ELVRLKFHE LA DMK AHEIVERRTGGLVIWR+GSV
Sbjct: 221  ISIPKAGITNAVLENIHDRWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVIWRAGSV 280

Query: 763  MVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVEDDKISNSIPEKNQPTFQNPD 942
            MVV+RG+NY+ P  + QP +   +  FVPDVSS D +      I+ S  EK++   +  +
Sbjct: 281  MVVFRGTNYQGPPSKLQPADREGDALFVPDVSSTDSVMTRSSNIATSSSEKSKLVMRITE 340

Query: 943  PTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPPFVPGYKTPFRLLPTGMRSR 1122
            PTENMTEEEAE NSLLD LGPRF +WWGTGLLPVDADLLPP VP YKTPFRLLP GMR+R
Sbjct: 341  PTENMTEEEAELNSLLDDLGPRFEEWWGTGLLPVDADLLPPKVPCYKTPFRLLPVGMRAR 400

Query: 1123 LTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQNTNNKL 1302
            LTNAEMTN+RKL+K+LPCHFALGRNRNHQGLA AI+K+WEKSLV KIAVKRGIQNTNNKL
Sbjct: 401  LTNAEMTNMRKLAKALPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKL 460

Query: 1303 MAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDIEEEVRIGAV 1482
            MA+ELK L GG LLLRNKYYI+I+RGKDFLP SVAAALAERQE+TK++QD+EE VR  +V
Sbjct: 461  MADELKMLTGGVLLLRNKYYIVIFRGKDFLPQSVAAALAERQEVTKQIQDVEERVRSNSV 520

Query: 1483 GIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASRAKTARIVRKIEHXXX 1662
              A S   EGKA AGTLAEF EAQARWGR+ISTEE E M EEAS+AKTAR+V++ EH   
Sbjct: 521  EAAPSGEDEGKALAGTLAEFYEAQARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLA 580

Query: 1663 XXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFD 1842
                            E +MVP+GP  DQETI++EER MFRRVGLRMKAYLPLGIRGVFD
Sbjct: 581  IAQAKKLRAESLLSKIETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFD 640

Query: 1843 GVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALIYYRG 2022
            GVIENMHLHWKHRELVKLISKQKTL+F++DTA+LLEYESGG+LVAIERVPKG+ALIYYRG
Sbjct: 641  GVIENMHLHWKHRELVKLISKQKTLAFVEDTAKLLEYESGGVLVAIERVPKGFALIYYRG 700

Query: 2023 KNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEI 2175
            KNY+RPISIRPRNLLTKAKALKRSVAMQRHEALSQHI ELE+ IE M  E+
Sbjct: 701  KNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHIFELEKNIEEMVKEM 751


>ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
            gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 846

 Score =  843 bits (2178), Expect = 0.0
 Identities = 450/747 (60%), Positives = 536/747 (71%), Gaps = 21/747 (2%)
 Frame = +1

Query: 25   SNTLRNARRGNYSSHKSRAPSAPWLNKWP----------SVEKEEKNVDSEKRVRAEDRV 174
            +N   N RR +  +HK   P+ PW++KWP          + ++  +N   +K   AE+  
Sbjct: 62   NNRSNNNRRVDQRNHK---PTPPWIDKWPPSSAGVGGDHAGKRGGENNGGDKIRSAEEEA 118

Query: 175  ES--RYFDGDKGRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEEN 348
            E+  RY + DKG++AIERIV RLRNL                   I+G D + P TGEE 
Sbjct: 119  EAKLRYLERDKGQNAIERIVLRLRNLGLGSDDEEDVEDEEG--GGINGGDVK-PVTGEER 175

Query: 349  LGDLLQRNWSRPDSVVLD---YEDDDRMLLPWXXXXXXXXXXXXXXX-----LKKKRVKA 504
            LGDLL+R W RPD ++ +    E++D +LLPW                    +KK R +A
Sbjct: 176  LGDLLKREWVRPDMMLAEGEESEEEDEVLLPWEKNEEEQAAERVEGEGGVAVMKKGRARA 235

Query: 505  PSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETL 684
            PSLAELT+ED                INIPKAG+TQ ++EKI+D WRK ELVRLKFHE L
Sbjct: 236  PSLAELTVEDSELRRLRRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVL 295

Query: 685  AQDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSA 864
            A+DMK AHEIVERRTGG+VIWR+GSVMVVYRG +Y+ P + +  +    E  FVPDVSSA
Sbjct: 296  ARDMKTAHEIVERRTGGMVIWRAGSVMVVYRGLDYKGPPVISNQMAGPKETLFVPDVSSA 355

Query: 865  DHLAVEDDKISNSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPV 1044
               A       +   E   P  +NP   ENMTEEEAEFNSLLD LGPRF +WWGTG+LPV
Sbjct: 356  GDEATNAKDNQSPPSEIKDPIIKNPIRKENMTEEEAEFNSLLDSLGPRFQEWWGTGVLPV 415

Query: 1045 DADLLPPFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASA 1224
            DADLLPP +PGYKTPFRLLPTGMRS LTNAEMTNLRK+ K+LPCHFALGRNRNHQGLA+A
Sbjct: 416  DADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAA 475

Query: 1225 IVKVWEKSLVVKIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSV 1404
            I+++WEKSL+ KIAVKRGIQNTNNKLMA+E+K L GG LLLRNKYYI+IYRGKDFLP+SV
Sbjct: 476  ILQIWEKSLIAKIAVKRGIQNTNNKLMADEVKALTGGVLLLRNKYYIVIYRGKDFLPSSV 535

Query: 1405 AAALAERQELTKKVQDIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTE 1584
            AA LAERQELTK++QD+EE VR   +      G +  A AGTLAEF EAQARWG+EI+ +
Sbjct: 536  AATLAERQELTKEIQDVEERVRNREIEAVQPVGDKVPAEAGTLAEFYEAQARWGKEITPD 595

Query: 1585 EHENMQEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITD 1764
              E M EEASR   AR+V++I+H                   E SM+P GP  DQE I++
Sbjct: 596  HREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISE 655

Query: 1765 EERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARL 1944
            EER MFR+VGL+MKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQK L+F++DTARL
Sbjct: 656  EERAMFRKVGLKMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKNLAFVEDTARL 715

Query: 1945 LEYESGGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALS 2124
            LEYESGG+LVAIE+VPKG+ALIYYRGKNY+RPIS+RPRNLLTKAKALKRS+AMQRHEALS
Sbjct: 716  LEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALS 775

Query: 2125 QHISELERTIEGMKSEI-NEDDLYRES 2202
            QHISELERTIE M+SE+ ++   Y ES
Sbjct: 776  QHISELERTIEQMQSELTSKTPSYSES 802


>ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [Amborella trichopoda]
            gi|548844363|gb|ERN03972.1| hypothetical protein
            AMTR_s00079p00107040 [Amborella trichopoda]
          Length = 826

 Score =  840 bits (2171), Expect = 0.0
 Identities = 460/750 (61%), Positives = 533/750 (71%), Gaps = 28/750 (3%)
 Frame = +1

Query: 25   SNTLRNARRGNYSSHKS---------RAPSAPWLNKWPSVEKEEKNVDSEKRVRAEDRVE 177
            S+T RN +     S  S         + P + WLNKW   + +  +  + +    EDRV+
Sbjct: 37   SSTTRNPKNPPIQSRTSSNPNPKPFPKNPPSSWLNKW--TQSDPSSNPNSRTSSEEDRVQ 94

Query: 178  SRYFDGDKGRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGED--AEIPCTGEE-- 345
              YFDGDKGRSAI RIV RLRNL                L++ DG+D   ++P    E  
Sbjct: 95   --YFDGDKGRSAIHRIVDRLRNLG---------------LSDGDGDDDSKDLPWGSREKG 137

Query: 346  -----NLGDLLQRNWSRPDSVVLDYEDDDRMLLPWXXXXXXXXXXXXXXXLKKKRVKAPS 510
                 +LG LLQ+ W RPD VV      D  LLPW                K +R+KAP+
Sbjct: 138  NLDDKDLGFLLQKTWERPDQVVNGDRISDA-LLPWERSEEGEYETKKE---KSRRIKAPT 193

Query: 511  LAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQ 690
            LAELT+ED                IN+PKAGVTQ +LEKIH  WRK+ELVRLKFHETL  
Sbjct: 194  LAELTIEDSELRRLRKLGITLRERINVPKAGVTQAVLEKIHMAWRKSELVRLKFHETLVH 253

Query: 691  DMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNY-----ERPSLRTQPV---NMVVEGP-- 840
            DMK AHEIVERRTGGLVIW SGSVMVVYRGS Y      RP+   + V   N+V EG   
Sbjct: 254  DMKTAHEIVERRTGGLVIWMSGSVMVVYRGSTYGQQPSSRPNTSEEEVIATNLVHEGDTL 313

Query: 841  FVPDVSSADHLAVEDDKISNSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDW 1020
            FVPDV+ ++ +     K  NSI    +P+  + D    +TEEE E+NS+LDGLGPRF++W
Sbjct: 314  FVPDVAHSEKIPESARK--NSIITAEKPSLFSVDEVPTLTEEEKEYNSILDGLGPRFVEW 371

Query: 1021 WGTGLLPVDADLLPPFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNR 1200
            WGTG LPVDADLLP  VPGYK PFRLLP GMRSRLTNAEMTNLRK ++ LP HFALGRNR
Sbjct: 372  WGTGFLPVDADLLPQKVPGYKPPFRLLPIGMRSRLTNAEMTNLRKFARKLPSHFALGRNR 431

Query: 1201 NHQGLASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRG 1380
            NHQG+A+AI+K+WE+SL+VKIAVKRGIQNTNNKLMAEELKKL GG LLLRNKYYI+IYRG
Sbjct: 432  NHQGMAAAIIKLWERSLIVKIAVKRGIQNTNNKLMAEELKKLTGGILLLRNKYYIVIYRG 491

Query: 1381 KDFLPTSVAAALAERQELTKKVQDIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQAR 1560
            KDFLP SVA+ALAERQ LTK +QD EE  R GA+G A +E  + +  AGTLAEF+EAQAR
Sbjct: 492  KDFLPPSVASALAERQALTKNIQDEEERARKGAIGAAEAELEKQEVLAGTLAEFKEAQAR 551

Query: 1561 WGREISTEEHENMQEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPS 1740
            WGREI+ EE E M+EE S+AK A +VR+IEH                   E SMVP GPS
Sbjct: 552  WGREIAAEEQEKMKEEISKAKHAGLVRRIEHKFAVAQAKKLRAEKQLSKIEASMVPVGPS 611

Query: 1741 DDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLS 1920
            DDQET+TDEER+MFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTL+
Sbjct: 612  DDQETVTDEERYMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLA 671

Query: 1921 FLQDTARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVA 2100
            F+++TARLLEYESGGIL+AIERVPKGYALIYYRGKNYQRP++IRPRNLLTKAKALKRSV 
Sbjct: 672  FVEETARLLEYESGGILIAIERVPKGYALIYYRGKNYQRPVTIRPRNLLTKAKALKRSVE 731

Query: 2101 MQRHEALSQHISELERTIEGMKSEINEDDL 2190
            MQRHEALSQHI ELERTIE MK E++  ++
Sbjct: 732  MQRHEALSQHILELERTIEHMKLELHNPEI 761


>ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
            gi|223528164|gb|EEF30228.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 745

 Score =  835 bits (2157), Expect = 0.0
 Identities = 437/705 (61%), Positives = 515/705 (73%), Gaps = 5/705 (0%)
 Frame = +1

Query: 25   SNTLRNARRGNYSSHKSRAPSAPWLNKWPSVEKEEKNVDSEKRVRAEDRVESRYFDGDKG 204
            S++  ++  G   + K   P +PWL+KW         V +  ++  + +++S     DKG
Sbjct: 44   SSSSSSSSLGTNQNPKPNNPKSPWLSKWAPHSSPPPTVKTSPKLAQDKKIQS--LTKDKG 101

Query: 205  RSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEENLGDLLQRNWSRP 384
            ++AIERIV RLRNL                 N  D     I  TGEE L DLLQR W RP
Sbjct: 102  QNAIERIVLRLRNLGLGSDDEEEEGDMEYKPNGGDS----IAVTGEERLADLLQREWVRP 157

Query: 385  DSVVL--DYEDD-DRMLLPWXXXXXXXXXXXXXXXLKKKR--VKAPSLAELTLEDVXXXX 549
            D++ +  D EDD D ++LPW                +++R  VKAP+LAELT+ED     
Sbjct: 158  DTIFIKDDEEDDNDDLVLPWERKEKVRREGEKEEGERERRRVVKAPTLAELTIEDEELRR 217

Query: 550  XXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKAHEIVERRT 729
                       +N+PKAG+T+ ++EKIHDKWRK ELVRLKFHE LA DMK AHEI ERRT
Sbjct: 218  LRRMGMFLRERVNVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLAHDMKTAHEITERRT 277

Query: 730  GGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVEDDKISNSIP 909
            GGLVIWR+GSVMVVYRGS+YE P  +TQPVN   +  F+PDVSSA    ++ D ++ S  
Sbjct: 278  GGLVIWRAGSVMVVYRGSSYEGPPSKTQPVNREGDALFIPDVSSAGSETMKGDNVAPSAA 337

Query: 910  EKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPPFVPGYKTP 1089
            EK +   +  D +++MTEEE E++S LD LGPRF +WWGTG+LPVDADLLPP +P YKTP
Sbjct: 338  EKRELAMRRLDHSKDMTEEEIEYDSFLDSLGPRFEEWWGTGILPVDADLLPPKIPDYKTP 397

Query: 1090 FRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAV 1269
            FRLLPTGMRSRLTNAEMTNLRKL+K LPCHFALGRNRNHQGLAS I+KVWEKSLV KIAV
Sbjct: 398  FRLLPTGMRSRLTNAEMTNLRKLAKKLPCHFALGRNRNHQGLASTILKVWEKSLVAKIAV 457

Query: 1270 KRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQ 1449
            KRGIQNTNNKLMA+ELK L GG LLLRNKYYI+IYRGKDFLPTSVAAAL ERQELTKK+Q
Sbjct: 458  KRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALTERQELTKKIQ 517

Query: 1450 DIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASRAKTA 1629
            D+EE+VR   +    S+  EGK  AGTLAEF EAQ+RWG++ S E+ E M E+ +RAK A
Sbjct: 518  DVEEKVRSREIEAVPSKEEEGKPLAGTLAEFYEAQSRWGKDTSAEDREKMIEDDTRAKRA 577

Query: 1630 RIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKA 1809
            RIV++IEH                   EVSM+P+GP  DQETITDEER +FRR+GLRMKA
Sbjct: 578  RIVKRIEHKLAVAQAKKLRAERLLAKIEVSMLPSGPDYDQETITDEERAVFRRIGLRMKA 637

Query: 1810 YLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERV 1989
            YLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTL+F +DTARLLEYESGGILVAIERV
Sbjct: 638  YLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFAEDTARLLEYESGGILVAIERV 697

Query: 1990 PKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALS 2124
            PKG+ALIYYRGKNY+RPI++RPRNLLTKAKALKRSVAMQRHE  S
Sbjct: 698  PKGFALIYYRGKNYRRPINLRPRNLLTKAKALKRSVAMQRHEVSS 742


>ref|NP_188468.1| CRS1 / YhbY domain-containing protein EMB1865 [Arabidopsis thaliana]
            gi|11994102|dbj|BAB01105.1| unnamed protein product
            [Arabidopsis thaliana] gi|17380904|gb|AAL36264.1| unknown
            protein [Arabidopsis thaliana]
            gi|332642570|gb|AEE76091.1| CRS1 / YhbY (CRM)
            domain-containing protein [Arabidopsis thaliana]
          Length = 848

 Score =  833 bits (2153), Expect = 0.0
 Identities = 443/747 (59%), Positives = 536/747 (71%), Gaps = 21/747 (2%)
 Frame = +1

Query: 25   SNTLRNARRGNYSSHKSRAPSAPWLNKWP----------SVEKEEKNVDSEKRVRAEDRV 174
            +N   N RR +  +HK   P+ PW++KWP          + +K  +N   ++   AE+  
Sbjct: 62   NNRSNNNRRLDQRNHK---PTPPWIDKWPPSSSGAGGDHAGKKGGENNGGDRIRSAEEEA 118

Query: 175  ES--RYFDGDKGRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEEN 348
            E+  RY + DKG++AIERIV RLRNL                   I+G D + P TGEE 
Sbjct: 119  EAKLRYLEKDKGQNAIERIVLRLRNLGLGSDDEDDVEDDEG--GGINGGDVK-PVTGEER 175

Query: 349  LGDLLQRNWSRPDSVVLD---YEDDDRMLLPWXXXXXXXXXXXXXXX-----LKKKRVKA 504
            LGDLL+R W RPD ++ +    E++D +LLPW                    ++K+R +A
Sbjct: 176  LGDLLKREWVRPDMMLAEGEESEEEDEVLLPWEKNEEEQAAERVVGEGGVAVMQKRRARA 235

Query: 505  PSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETL 684
            PSLAELT+ED                INIPKAG+TQ ++EKI+D WRK ELVRLKFHE L
Sbjct: 236  PSLAELTVEDSELRRLRRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVL 295

Query: 685  AQDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSA 864
            A+DMK AHEIVERRTGG+VIWR+GSVMVVYRG +Y+ P + +  +    E  FVPDVSSA
Sbjct: 296  ARDMKTAHEIVERRTGGMVIWRAGSVMVVYRGLDYKGPPVISNQMAGPKETLFVPDVSSA 355

Query: 865  DHLAVEDDKISNSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPV 1044
               A       ++      P  +NP   ENMTEEE EFNSLLD LGPRF +WWGTG+LPV
Sbjct: 356  GDEATNAKDNQSAPLVIKDPIIKNPIRKENMTEEEVEFNSLLDSLGPRFQEWWGTGVLPV 415

Query: 1045 DADLLPPFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASA 1224
            DADLLPP +PGYKTPFRLLPTGMRS LTNAEMTNLRK+ K+LPCHFALGRNRNHQGLA+A
Sbjct: 416  DADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAA 475

Query: 1225 IVKVWEKSLVVKIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSV 1404
            I+++WEKSL+ KIAVKRGIQNTNNKLMA+E+K L GG LLLRNKYYI+IYRGKDFLP+SV
Sbjct: 476  ILQIWEKSLIAKIAVKRGIQNTNNKLMADEVKTLTGGVLLLRNKYYIVIYRGKDFLPSSV 535

Query: 1405 AAALAERQELTKKVQDIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTE 1584
            AA LAERQELTK++QD+EE VR   +      G +  A AGTLAEF EAQARWG+EI+ +
Sbjct: 536  AATLAERQELTKEIQDVEERVRNREIEAVQPVGDKVPAEAGTLAEFYEAQARWGKEITPD 595

Query: 1585 EHENMQEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITD 1764
              E M EEASR   AR+V++I+H                   E SM+P GP  DQE I++
Sbjct: 596  HREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISE 655

Query: 1765 EERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARL 1944
            EER MFR+VGL+MKAYLP+GIRGVFDGVIENMHLHWKHRELVKLISKQK  +F+++TARL
Sbjct: 656  EERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEETARL 715

Query: 1945 LEYESGGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALS 2124
            LEYESGG+LVAIE+VPKG+ALIYYRGKNY+RPIS+RPRNLLTKAKALKRS+AMQRHEALS
Sbjct: 716  LEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALS 775

Query: 2125 QHISELERTIEGMKSEI-NEDDLYRES 2202
            QHISELERTIE M+S++ +++  Y ES
Sbjct: 776  QHISELERTIEQMQSQLTSKNPSYSES 802


>ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 824

 Score =  833 bits (2153), Expect = 0.0
 Identities = 441/726 (60%), Positives = 522/726 (71%), Gaps = 2/726 (0%)
 Frame = +1

Query: 4    NTQQKGRSNTLRNARRGNYSSHKSRAPSAPWLNKWPSVEKEEKNVDSEKRVRAEDRVESR 183
            N  +K      R++   +     + + S+ WLNKWP+     K+  + + V  E + E+R
Sbjct: 44   NIPRKDNRKPYRDSNSSSTPVKSNNSRSSTWLNKWPNTSPPVKHSSNSRTV--ESKTETR 101

Query: 184  YFDGDK--GRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEENLGD 357
            YFD +   G +AI+RIV RLRNL                  ++D          EE LGD
Sbjct: 102  YFDENTRVGTTAIDRIVLRLRNLGLGSDDEGEGEDEEEGNLKLDSSSTMQVNGEEEKLGD 161

Query: 358  LLQRNWSRPDSVVLDYEDDDRMLLPWXXXXXXXXXXXXXXXLKKKRVKAPSLAELTLEDV 537
            LL+R+W RPD ++ + +D+    LPW                 K+ VKAPSLAELT+ED 
Sbjct: 162  LLKRDWVRPDMILEESDDEGDTYLPWERSVEEEAVEVQRGG--KRTVKAPSLAELTIEDE 219

Query: 538  XXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKAHEIV 717
                           IN+PKAGVT  +LEKIH  WRK ELVRLKFHE LA DM+  HEIV
Sbjct: 220  ELRRLRRMGMTLRERINVPKAGVTGAVLEKIHHSWRKNELVRLKFHEVLAHDMRTGHEIV 279

Query: 718  ERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVEDDKIS 897
            ERRT GLVIWR+GSVMVVYRGSNYE PS R+Q VN      FVPDVSS   +  ++   +
Sbjct: 280  ERRTRGLVIWRAGSVMVVYRGSNYEGPSSRSQSVNEEDNALFVPDVSSDKSITKDNKSFN 339

Query: 898  NSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPPFVPG 1077
              I  +NQ    +P+  ++MT EE+EFN +LDGLGPRF DWWGTG+LPVDADLLP  +PG
Sbjct: 340  PVIENRNQV---HPNSVQSMTVEESEFNRVLDGLGPRFEDWWGTGVLPVDADLLPQTIPG 396

Query: 1078 YKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVV 1257
            YKTPFRLLPTGMRSRLTNAEMTNLRK++KSLPCHFALGRNRNHQGLA+AIVK+WEKSLVV
Sbjct: 397  YKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIVKLWEKSLVV 456

Query: 1258 KIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAERQELT 1437
            KIAVKRGIQNTNNKLM+EELK L GG LLLRNKYYII YRGKDF+P +VAA LAERQELT
Sbjct: 457  KIAVKRGIQNTNNKLMSEELKMLTGGVLLLRNKYYIIFYRGKDFVPPTVAAVLAERQELT 516

Query: 1438 KKVQDIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASR 1617
            K++QD+EE+ R G   +A     +G+A AG+LAEF EAQARWGREIS EE E M +EA+ 
Sbjct: 517  KQIQDVEEQTRSGPAKVAPLT-TDGQAVAGSLAEFYEAQARWGREISAEERERMLKEAAM 575

Query: 1618 AKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGL 1797
            AKTAR+V+++EH                     S +PAGPSDD ETIT+EER M RRVGL
Sbjct: 576  AKTARVVKRLEHKFEISQTKKLKAEKILAKIVESWIPAGPSDDLETITEEERVMLRRVGL 635

Query: 1798 RMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVA 1977
            RMK+YLPLGIRGVFDGVIENMHLHWKHRELVKLISK+K L+F+++TARLLEYESGGILVA
Sbjct: 636  RMKSYLPLGIRGVFDGVIENMHLHWKHRELVKLISKEKVLAFVEETARLLEYESGGILVA 695

Query: 1978 IERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIE 2157
            IERVPKGYALI+YRGKNY+RPIS+RPRNLLTKAKALKR VA+QR+EALSQHI+ELE TIE
Sbjct: 696  IERVPKGYALIFYRGKNYRRPISLRPRNLLTKAKALKRRVALQRYEALSQHIAELETTIE 755

Query: 2158 GMKSEI 2175
              KS+I
Sbjct: 756  QTKSKI 761


>ref|XP_006406610.1| hypothetical protein EUTSA_v10020034mg [Eutrema salsugineum]
            gi|557107756|gb|ESQ48063.1| hypothetical protein
            EUTSA_v10020034mg [Eutrema salsugineum]
          Length = 874

 Score =  833 bits (2153), Expect = 0.0
 Identities = 453/780 (58%), Positives = 543/780 (69%), Gaps = 48/780 (6%)
 Frame = +1

Query: 7    TQQKGRSNTLRNARRGNYSSHKSRAPSAPWLNKWP---------SVEKEEKNVDSEKRVR 159
            T ++  +N   N RR +    K   P+ PW++KWP         S +K  +     K   
Sbjct: 56   TSERSSNNRSHNNRRLDQRHSK---PTPPWIDKWPPSSAGAGDHSGKKVAEQNGGGKIRS 112

Query: 160  AEDRVES--RYFDGDKGRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPC 333
            AE+  E+  RY + DKG SAIERIV RLRNL                 + I+G D + P 
Sbjct: 113  AEEEAEAKRRYLEKDKGHSAIERIVLRLRNLGLASDDEDDVEDNEG--DGINGGDVK-PV 169

Query: 334  TGEENLGDLLQRNWSRPDSVVLDYED----DDRMLLPWXXXXXXXXXXXXXXX---LKKK 492
            TGEE LGDLL+R W RPD ++ + E+    DD +LLPW                  +KK+
Sbjct: 170  TGEERLGDLLKREWVRPDMMLAEGEEESDEDDDVLLPWEKNEEEQAAERMEGDGAAVKKR 229

Query: 493  RVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKF 672
            R +APSLAELT+ED                I+IPKAG+TQ ++EKIHD WRK ELVRLKF
Sbjct: 230  RARAPSLAELTVEDSELRRLRRDGMYLRVRISIPKAGLTQAVMEKIHDTWRKEELVRLKF 289

Query: 673  HETLAQDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPD 852
            HE LA+DM+ AHEIVERRTGG+VIWR+GSVMVVYRG +Y+ PS+ +  +    E  FVPD
Sbjct: 290  HEVLARDMRTAHEIVERRTGGMVIWRAGSVMVVYRGRDYQGPSMISNQMARPEETLFVPD 349

Query: 853  VSSADHLAVEDDKISNSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTG 1032
            VSSA   A       ++ PE   P  +NP   E MTEEEAEFNSLLD LGPRF +WWGTG
Sbjct: 350  VSSAGDEATGSKDNQSAPPEIKDPIVRNPIRKETMTEEEAEFNSLLDSLGPRFHEWWGTG 409

Query: 1033 LLPVDADLLPPFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQG 1212
            +LPV+ADLLPP +PGYKTPFRLLPTGMRS LTNAEMTNLRK+ K+LPCHFALGRNRNHQG
Sbjct: 410  VLPVNADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQG 469

Query: 1213 LASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFL 1392
            LA+AI+K+WEKSL+ KIAVKRGIQNTNNKLMA+E+K L GG LLLRNKYYI+IYRGKDFL
Sbjct: 470  LAAAILKLWEKSLIAKIAVKRGIQNTNNKLMADEIKTLTGGVLLLRNKYYIVIYRGKDFL 529

Query: 1393 PTSVAAALAERQELTKKVQDIEEEVRIGAV---------------------------GIA 1491
            P+SVAA LAERQELTK++QD+EE VR   +                            I 
Sbjct: 530  PSSVAATLAERQELTKEIQDVEERVRTRDIETSQPVGDTVPAEAGTLADIEERVNNRDIE 589

Query: 1492 TSE--GFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASRAKTARIVRKIEHXXXX 1665
             S+  G +  A AGTLAEF EAQARWG+EI+ +  E M EEASR  +AR+V++I+H    
Sbjct: 590  ASQPVGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVASARVVKRIQHKLNL 649

Query: 1666 XXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDG 1845
                           E SM+P GP  DQE I++EER MFR+VGL+MK+YLPLGIRGVFDG
Sbjct: 650  AQSKFHRAEKLLSKIEASMIPNGPDYDQEVISEEERIMFRKVGLKMKSYLPLGIRGVFDG 709

Query: 1846 VIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALIYYRGK 2025
            VIENMHLHWKHRELVKLISKQK+L+F++DTARLLEYESGG+LVAIE+VPKG+ALIYYRGK
Sbjct: 710  VIENMHLHWKHRELVKLISKQKSLAFVEDTARLLEYESGGVLVAIEKVPKGFALIYYRGK 769

Query: 2026 NYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEIN-EDDLYRES 2202
            NYQRPIS+RPRNLLTKAKALKRS+AMQRHEALSQHISELE+TIE M++E+  ++  Y ES
Sbjct: 770  NYQRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELEKTIEQMQNELTAKNPSYSES 829


>ref|XP_004235759.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 820

 Score =  832 bits (2148), Expect = 0.0
 Identities = 440/726 (60%), Positives = 521/726 (71%), Gaps = 2/726 (0%)
 Frame = +1

Query: 4    NTQQKGRSNTLRNARRGNYSSHKSRAPSAPWLNKWPSVEKEEKNVDSEKRVRAEDRVESR 183
            N  +K      R++   +     + + S+ WLNKWP+     K+  + + V  E + E+R
Sbjct: 44   NIPRKDNRKPYRDSNSSSTPVKSNNSRSSTWLNKWPNTSSPVKHSSNSRTV--ESKTETR 101

Query: 184  YFDGDK--GRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEENLGD 357
            YFD +   G +AI+RIV RLRNL                  ++D          EE LGD
Sbjct: 102  YFDENTRVGTTAIDRIVLRLRNLGLGSDDEGEGEDEEEGNLKLDSSSTMQVNGEEEKLGD 161

Query: 358  LLQRNWSRPDSVVLDYEDDDRMLLPWXXXXXXXXXXXXXXXLKKKRVKAPSLAELTLEDV 537
            LL+R+W RPD ++ + +D+    LPW                 K+ V+APSLAELT+ED 
Sbjct: 162  LLKRDWVRPDMILEESDDEGDTYLPWERSVEEEAVEVQRGG--KRTVRAPSLAELTIEDE 219

Query: 538  XXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKAHEIV 717
                           IN+PKAGVT  +LEKIH  WRK ELVRLKFHE LA DM+  HEIV
Sbjct: 220  ELRRLRRIGMTLRERINVPKAGVTGAVLEKIHHSWRKNELVRLKFHEVLAHDMRTGHEIV 279

Query: 718  ERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVEDDKIS 897
            ERRT GLVIWR+GSVMVVYRGSNYE PS R+Q VN      FVPDVSS   +  ++   +
Sbjct: 280  ERRTKGLVIWRAGSVMVVYRGSNYEGPSSRSQSVNEEDNALFVPDVSSDKSITKDNKSFN 339

Query: 898  NSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPPFVPG 1077
              I  +NQ    +P+  ++MTEEE+EFN +LDGLGPRF DWWGTG+LPVDADLLP  +PG
Sbjct: 340  PVIENRNQV---HPNRVQSMTEEESEFNRVLDGLGPRFEDWWGTGVLPVDADLLPQTIPG 396

Query: 1078 YKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVV 1257
            YKTPFRLLPTGMRSRLTNAEMTNLRK++KSLPCHFALGRNRNHQGLA+AIVK+WEKSLVV
Sbjct: 397  YKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIVKLWEKSLVV 456

Query: 1258 KIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAERQELT 1437
            KIAVKRGIQNTNNKLM+EELK L GG LLLRNKYYII YRGKDF+P +VAA LAERQELT
Sbjct: 457  KIAVKRGIQNTNNKLMSEELKMLTGGVLLLRNKYYIIFYRGKDFVPPTVAAVLAERQELT 516

Query: 1438 KKVQDIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASR 1617
            K++QD+EE+ R G   +A     +G+A AG+LAEF EAQARWGREIS EE E M +EA+ 
Sbjct: 517  KQIQDVEEQTRSGPAKVAPLI-TDGQAVAGSLAEFYEAQARWGREISAEERERMLKEAAM 575

Query: 1618 AKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGL 1797
            AK AR+V+++EH                     S +PAGPSDD ETIT+EER M RRVGL
Sbjct: 576  AKMARVVKRLEHKFEISQTKKLKAEKILAKIVESWIPAGPSDDLETITEEERVMLRRVGL 635

Query: 1798 RMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVA 1977
            RMK+YLPLGIRGVFDGVIENMHLHWKHRELVKLISK+K L+F+++TARLLEYESGGILVA
Sbjct: 636  RMKSYLPLGIRGVFDGVIENMHLHWKHRELVKLISKEKVLAFVEETARLLEYESGGILVA 695

Query: 1978 IERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIE 2157
            IERVPKGYALI+YRGKNY+RPIS+RPRNLLTKAKALKR VA+QR+EALSQHI ELE TIE
Sbjct: 696  IERVPKGYALIFYRGKNYRRPISLRPRNLLTKAKALKRRVALQRYEALSQHIGELETTIE 755

Query: 2158 GMKSEI 2175
              KS+I
Sbjct: 756  QTKSKI 761


>ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
            gi|557543243|gb|ESR54221.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
          Length = 806

 Score =  830 bits (2143), Expect = 0.0
 Identities = 446/730 (61%), Positives = 527/730 (72%), Gaps = 14/730 (1%)
 Frame = +1

Query: 28   NTLRNARRGNYSSHKSRAPSAPWLNKW-----PSVEKEEK----NVDSEKRVRAEDRVES 180
            N   +++   +   +S + SAPWLN W     PS E   K    N   EK+   +     
Sbjct: 56   NPRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSY--P 113

Query: 181  RYFDGD-KGRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEENLGD 357
            RY D D KGR+AIERIV RLRNL                  E + +D     TGEE L D
Sbjct: 114  RYSDSDNKGRNAIERIVLRLRNLGLGSDDEEE--------GEEEEDDINDAATGEERLED 165

Query: 358  LLQRNWSRPDSVVLDYE-DDDRMLLPWXXXXXXXXXXXXXXXL---KKKRVKAPSLAELT 525
            LL+R W RP++V+ + E ++D  LLPW                   +++R+KAP+LAELT
Sbjct: 166  LLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELT 225

Query: 526  LEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKA 705
            +ED                IN+PKAG+TQ ++ KIHDKWRK ELVRLKFHE LA DMK A
Sbjct: 226  IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285

Query: 706  HEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVED 885
            HEIVERRTGGLVIWR+GSVMVVYRGSNY  PS + QP++   +  FVP VSS D      
Sbjct: 286  HEIVERRTGGLVIWRAGSVMVVYRGSNYAGPSSKPQPIDGDGDTLFVPHVSSTD------ 339

Query: 886  DKISNSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPP 1065
               + S+ EK++   +  D ++ MTEEEAE NSLLD LGPRF +WWGTG+LPVDADLLPP
Sbjct: 340  GSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPP 399

Query: 1066 FVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEK 1245
             V GYKTPFRLLPTGMRSRLTNAEMT+LR+L++SLPCHFALGRNRNHQGLA AI+K+WEK
Sbjct: 400  KVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEK 459

Query: 1246 SLVVKIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAER 1425
            SLV KIAVKRGIQNTNNKLMAEELK L GGTLL RNK+YI++YRGKDFLP +VA+ALAER
Sbjct: 460  SLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAER 519

Query: 1426 QELTKKVQDIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQE 1605
            ++  K++QD+EE+VR   +    S   EG+A AGTLAEF EAQ RWGRE+S EE E M E
Sbjct: 520  EQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVE 579

Query: 1606 EASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFR 1785
            EAS+AK  R+V++IEH                   E SMVP+GP  DQETITDEER MFR
Sbjct: 580  EASKAKHGRLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFR 639

Query: 1786 RVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGG 1965
            RVGLRMKA+LPLGIRGVFDGV+ENMHLHWK+RELVKLI+KQKTL++++DTARLLEYES G
Sbjct: 640  RVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESVG 699

Query: 1966 ILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELE 2145
            IL+AIERVPKG+ALI+YRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHIS+LE
Sbjct: 700  ILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLE 759

Query: 2146 RTIEGMKSEI 2175
             TIE MK EI
Sbjct: 760  NTIEQMKKEI 769


>ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
            gi|567896982|ref|XP_006440979.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|567896984|ref|XP_006440980.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543240|gb|ESR54218.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543241|gb|ESR54219.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543242|gb|ESR54220.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
          Length = 833

 Score =  830 bits (2143), Expect = 0.0
 Identities = 446/730 (61%), Positives = 527/730 (72%), Gaps = 14/730 (1%)
 Frame = +1

Query: 28   NTLRNARRGNYSSHKSRAPSAPWLNKW-----PSVEKEEK----NVDSEKRVRAEDRVES 180
            N   +++   +   +S + SAPWLN W     PS E   K    N   EK+   +     
Sbjct: 56   NPRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSY--P 113

Query: 181  RYFDGD-KGRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEENLGD 357
            RY D D KGR+AIERIV RLRNL                  E + +D     TGEE L D
Sbjct: 114  RYSDSDNKGRNAIERIVLRLRNLGLGSDDEEE--------GEEEEDDINDAATGEERLED 165

Query: 358  LLQRNWSRPDSVVLDYE-DDDRMLLPWXXXXXXXXXXXXXXXL---KKKRVKAPSLAELT 525
            LL+R W RP++V+ + E ++D  LLPW                   +++R+KAP+LAELT
Sbjct: 166  LLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELT 225

Query: 526  LEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKA 705
            +ED                IN+PKAG+TQ ++ KIHDKWRK ELVRLKFHE LA DMK A
Sbjct: 226  IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285

Query: 706  HEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVED 885
            HEIVERRTGGLVIWR+GSVMVVYRGSNY  PS + QP++   +  FVP VSS D      
Sbjct: 286  HEIVERRTGGLVIWRAGSVMVVYRGSNYAGPSSKPQPIDGDGDTLFVPHVSSTD------ 339

Query: 886  DKISNSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPP 1065
               + S+ EK++   +  D ++ MTEEEAE NSLLD LGPRF +WWGTG+LPVDADLLPP
Sbjct: 340  GSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPP 399

Query: 1066 FVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEK 1245
             V GYKTPFRLLPTGMRSRLTNAEMT+LR+L++SLPCHFALGRNRNHQGLA AI+K+WEK
Sbjct: 400  KVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEK 459

Query: 1246 SLVVKIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAER 1425
            SLV KIAVKRGIQNTNNKLMAEELK L GGTLL RNK+YI++YRGKDFLP +VA+ALAER
Sbjct: 460  SLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAER 519

Query: 1426 QELTKKVQDIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQE 1605
            ++  K++QD+EE+VR   +    S   EG+A AGTLAEF EAQ RWGRE+S EE E M E
Sbjct: 520  EQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVE 579

Query: 1606 EASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFR 1785
            EAS+AK  R+V++IEH                   E SMVP+GP  DQETITDEER MFR
Sbjct: 580  EASKAKHGRLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFR 639

Query: 1786 RVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGG 1965
            RVGLRMKA+LPLGIRGVFDGV+ENMHLHWK+RELVKLI+KQKTL++++DTARLLEYES G
Sbjct: 640  RVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESVG 699

Query: 1966 ILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELE 2145
            IL+AIERVPKG+ALI+YRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHIS+LE
Sbjct: 700  ILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLE 759

Query: 2146 RTIEGMKSEI 2175
             TIE MK EI
Sbjct: 760  NTIEQMKKEI 769


>ref|XP_006296939.1| hypothetical protein CARUB_v10012930mg, partial [Capsella rubella]
            gi|482565648|gb|EOA29837.1| hypothetical protein
            CARUB_v10012930mg, partial [Capsella rubella]
          Length = 910

 Score =  829 bits (2141), Expect = 0.0
 Identities = 455/786 (57%), Positives = 543/786 (69%), Gaps = 61/786 (7%)
 Frame = +1

Query: 28   NTLRNARRGNYSSHKSRA-------PSAPWLNKWP----------SVEKEEKNVDSEKRV 156
            ++LR + R N  SH +R        PS PW++KWP          S +K  ++    K  
Sbjct: 84   SSLRTSERSNNRSHNNRRLDNRNHKPSPPWIDKWPPSSSGAGSDHSGKKGGEHNGGAKIR 143

Query: 157  RAEDRVES--RYFDGDKGRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIP 330
             AE+  E+  RY + DKG++AIERIV RLRNL                 + ++G D ++ 
Sbjct: 144  SAEEEAEAKLRYLERDKGQNAIERIVLRLRNLGLGSDDEEDVEDDEE--SGMNGGDVKL- 200

Query: 331  CTGEENLGDLLQRNWSRPDSVVLD---YEDDDRMLLPWXXXXXXXXXXXXXXX-----LK 486
             TGEE LGDLL+R W RPD ++ +    E++D +LLPW                    + 
Sbjct: 201  VTGEERLGDLLKREWVRPDMMLAEGEESEEEDDVLLPWEKNEQEQAAERVEGEGGVAVMT 260

Query: 487  KKRVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRL 666
            K+R +APSLAELT+ED                INIPKAG+TQ ++EKIHD WRK ELVRL
Sbjct: 261  KRRARAPSLAELTVEDSELRRLRRDGMYLRVRINIPKAGLTQAVMEKIHDTWRKEELVRL 320

Query: 667  KFHETLAQDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGPFV 846
            KFHE LA+DMK AHEIVERRTGG+VIWR+GSVMVVYRG +Y+ PS+ +  +    E  FV
Sbjct: 321  KFHEVLARDMKTAHEIVERRTGGMVIWRAGSVMVVYRGLDYQGPSVISNRMAGPKETLFV 380

Query: 847  PDVSSADHLAVEDDKISNSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWG 1026
            PDVSSA   A       N   E   P  +NP   +NMTEEE EFN+LLD LGPRF +WWG
Sbjct: 381  PDVSSAGDEATNAKDNQNPPLEIRDPIVKNPIRKQNMTEEEIEFNNLLDSLGPRFQEWWG 440

Query: 1027 TGLLPVDADLLPPFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNH 1206
            TG+LPVDADLLPP VPGYKTPFRLLPTGMRS LTNAEMTNLRK+ K+LPCHFALGRNRNH
Sbjct: 441  TGVLPVDADLLPPTVPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNH 500

Query: 1207 QGLASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKD 1386
            QGLA+AI+++WEKSL+ KIAVKRGIQNTNNKLMA+ELK L GG LLLRNKYYI+IYRGKD
Sbjct: 501  QGLAAAILQIWEKSLIAKIAVKRGIQNTNNKLMADELKALTGGVLLLRNKYYIVIYRGKD 560

Query: 1387 FLPTSVAAALAERQELTKKVQDIEEEVR------IGAVG--------------------I 1488
            FLP+SVAA LAERQELTK++QD+EE VR      I  VG                    +
Sbjct: 561  FLPSSVAATLAERQELTKEIQDVEERVRTRDIEAIQPVGDKVPVERQELTEEIQHVEESV 620

Query: 1489 ATSE-------GFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASRAKTARIVRKI 1647
             T +       G +  A AGTLAEF EAQARWG+EI+ +  E M EEASR   AR+V++I
Sbjct: 621  RTRDIKAIQPVGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVKRI 680

Query: 1648 EHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGI 1827
            +H                   E SM+P GP  DQE I++EER MFR+VGL+MKAYLPLGI
Sbjct: 681  QHKLNIGQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPLGI 740

Query: 1828 RGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYAL 2007
            RGVFDGVIENMHLHWKHRELVKLISKQK L+F++DTARLLEYESGG+LVAIE+VPKG+AL
Sbjct: 741  RGVFDGVIENMHLHWKHRELVKLISKQKNLAFVEDTARLLEYESGGVLVAIEKVPKGFAL 800

Query: 2008 IYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEIN-ED 2184
            IYYRGKNY+RPIS+RPRNLLTKAKALKRS+AMQRHEALSQHISELERTIE M+S++  ++
Sbjct: 801  IYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSQLTAKN 860

Query: 2185 DLYRES 2202
              Y ES
Sbjct: 861  PSYNES 866


>ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 837

 Score =  828 bits (2139), Expect = 0.0
 Identities = 450/736 (61%), Positives = 529/736 (71%), Gaps = 18/736 (2%)
 Frame = +1

Query: 22   RSNTLRNARRGNYSSHKSRAPS--APWLNKW-----PSVEKEEKNVDSEKRVRAEDRVES 180
            R+N        N    K R PS  APWLN W     PS E   K+    +    +   +S
Sbjct: 52   RTNQNPRTDSQNQKFPKPRFPSTSAPWLNNWSRPKPPSTENVNKSDGRNQIDEKQTAPDS 111

Query: 181  --RYFDGD-KGRSAIERIVFRLRNLXXXXXXXXXXXXXXXVLNEIDGEDAEIPCTGEENL 351
              RY D D KGR+AIERIV RLRNL                  E + +D     TGEE L
Sbjct: 112  YPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEE--------GEEEEDDINGAATGEERL 163

Query: 352  GDLLQRNWSRPDSVVLDYE-DDDRMLLPWXXXXXXXXXXXXXXXL---KKKRVKAPSLAE 519
             DLL+R W RP++V+ + E ++D  LLPW                   +++R+KAP+LAE
Sbjct: 164  EDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAE 223

Query: 520  LTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMK 699
            LT+ED                IN+PKAG+TQ ++ KIHDKWRK ELVRLKFHE LA DMK
Sbjct: 224  LTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMK 283

Query: 700  KAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQPVNMVVEGP----FVPDVSSAD 867
             AHEIVERRTGGLVIWR+GSVMVVY+GSNY  PS + QP++   +G     FVP VSS D
Sbjct: 284  TAHEIVERRTGGLVIWRAGSVMVVYQGSNYAGPSSKPQPLDGDGDGDGDTLFVPHVSSTD 343

Query: 868  HLAVEDDKISNSIPEKNQPTFQNPDPTENMTEEEAEFNSLLDGLGPRFLDWWGTGLLPVD 1047
                     + S+ EK++   +  D ++ MTEEEAE NSLLD LGPRF +WWGTG+LPVD
Sbjct: 344  ------GSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVD 397

Query: 1048 ADLLPPFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAI 1227
            ADLLPP V GYKTPFRLLPTGMRSRLTNAEMT+LR+L++SLPCHFALGRNRNHQGLA AI
Sbjct: 398  ADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAI 457

Query: 1228 VKVWEKSLVVKIAVKRGIQNTNNKLMAEELKKLMGGTLLLRNKYYIIIYRGKDFLPTSVA 1407
            +K+WEKSLV KIAVKRGIQNTNNKLMAEELK L GGTLL RNK+YI++YRGKDFLP +VA
Sbjct: 458  LKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVA 517

Query: 1408 AALAERQELTKKVQDIEEEVRIGAVGIATSEGFEGKAAAGTLAEFREAQARWGREISTEE 1587
            +ALAER++  K++QD+EE+VR   +    S   EG+A AGTLAEF EAQ RWGRE+S EE
Sbjct: 518  SALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEE 577

Query: 1588 HENMQEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDE 1767
             E M EEAS+AK AR+V++IEH                   E SMVP+GP  DQETITDE
Sbjct: 578  REKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDE 637

Query: 1768 ERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLL 1947
            ER MFRRVGLRMKA+LPLGIRGVFDGV+ENMHLHWK+RELVKLI+KQKTL++++DTARLL
Sbjct: 638  ERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLL 697

Query: 1948 EYESGGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQ 2127
            EYESGGIL+AIERVPKG+ALI+YRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQ
Sbjct: 698  EYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQ 757

Query: 2128 HISELERTIEGMKSEI 2175
            HIS+LE TIE MK EI
Sbjct: 758  HISDLENTIEQMKKEI 773


>ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 791

 Score =  826 bits (2133), Expect = 0.0
 Identities = 439/702 (62%), Positives = 518/702 (73%), Gaps = 4/702 (0%)
 Frame = +1

Query: 82   PSAPWLNKWPSVEKEEKNVDSEKRVRAEDRVESRYFDGDKGRSAIERIVFRLRNLXXXXX 261
            PSAPWL K PS ++      + + + A D    R     K ++A++RIV RLRNL     
Sbjct: 48   PSAPWLTKSPSPKR------AVEPLPAGDPTPDR-----KPQNAVDRIVLRLRNLGLPSE 96

Query: 262  XXXXXXXXXXVLNEIDGEDAEIPCTGEENLGDLLQRNWSRPDSVVLDYEDDDR--MLLPW 435
                         EI   +   P TGEE LG+LLQR W RPD+V++  +DD+   M+LPW
Sbjct: 97   EEEQEQEHE---EEIPATNPA-PVTGEERLGELLQREWVRPDAVLVGEDDDEEEEMMLPW 152

Query: 436  XXXXXXXXXXXXXXX--LKKKRVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVT 609
                             LKK+RV+APSLA+LTLED                +++PKAG+T
Sbjct: 153  ERDEEEKEVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLT 212

Query: 610  QVILEKIHDKWRKAELVRLKFHETLAQDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNY 789
            + ++EKIH +WRK ELVRLKFHE LA+DM+KAHEIVERRTGGLV WRSGSVM+VYRG +Y
Sbjct: 213  EEVMEKIHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDY 272

Query: 790  ERPSLRTQPVNMVVEGPFVPDVSSADHLAVEDDKISNSIPEKNQPTFQNPDPTENMTEEE 969
            + P  R +      +G FVPDVS        +D  + S  EK++   +  +  ENM+E E
Sbjct: 273  QGPDSRKELNEKKGDGFFVPDVSK------REDSTATSTSEKSEVVVREREHPENMSEAE 326

Query: 970  AEFNSLLDGLGPRFLDWWGTGLLPVDADLLPPFVPGYKTPFRLLPTGMRSRLTNAEMTNL 1149
            AE+N+LLDGLGPRF  WWGTG+LPVDADLLP  VPGYKTPFRLLPTGMRSRLTNAEMTNL
Sbjct: 327  AEYNALLDGLGPRFFGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNL 386

Query: 1150 RKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAEELKKLM 1329
            RKL+KSLPCHFA+GRNRNHQGLA AI+K+WEKSLV KIAVKRGIQNTNN+LMAEELK L 
Sbjct: 387  RKLAKSLPCHFAVGRNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNELMAEELKMLT 446

Query: 1330 GGTLLLRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDIEEEVRIGAVGIATSEGFE 1509
            GGTLLLRNKY+I+IYRGKDF+PTSVAA LAER+ELTK+VQD+E++VR  AV    S   E
Sbjct: 447  GGTLLLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPSGQGE 506

Query: 1510 GKAAAGTLAEFREAQARWGREISTEEHENMQEEASRAKTARIVRKIEHXXXXXXXXXXXX 1689
              A AGTLAEF EAQARWGREIS +E E M EEA++AKTA++VR+IEH            
Sbjct: 507  ATAQAGTLAEFYEAQARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFIAQTKKLRA 566

Query: 1690 XXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLH 1869
                   E SMVPAGP  DQETITDEER MFR+VGLRMK YLPLGIRGVFDGV+ENMHLH
Sbjct: 567  EKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLH 626

Query: 1870 WKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISI 2049
            WKHRELVKL++KQKTL+F++DTARLLEYESGGILVAIE+V K +ALIYYRGKNY+RPI++
Sbjct: 627  WKHRELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITL 686

Query: 2050 RPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEI 2175
            RPRNLLTK KALKR VAMQRHEALSQHI+ELE+TIE MK E+
Sbjct: 687  RPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKEL 728


>ref|XP_003530015.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 791

 Score =  823 bits (2127), Expect = 0.0
 Identities = 438/707 (61%), Positives = 518/707 (73%), Gaps = 9/707 (1%)
 Frame = +1

Query: 82   PSAPWLNKWPSVEKEEKNVDSEKRVRAEDRVESRYFDGDKGRSAIERIVFRLRNLXXXXX 261
            PSAPWL K PS ++      + + + A D +  +     K  + +ERIV RLRNL     
Sbjct: 50   PSAPWLTKSPSPKR------ATEPLTAGDPIPDK-----KPHNPVERIVLRLRNLGLPSE 98

Query: 262  XXXXXXXXXXVLNEIDGEDAEIPC------TGEENLGDLLQRNWSRPDSVVLDYED-DDR 420
                         E   E+ EIP       TGEE LG+LL+R W RPD+V++  +D ++ 
Sbjct: 99   ------------EEEQEEEEEIPANNPAPVTGEERLGELLRREWVRPDAVLVGEDDGEEE 146

Query: 421  MLLPWXXXXXXXXXXXXXXX--LKKKRVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIP 594
            M+LPW                 LKK+RV+APSLA+LTLED                +++P
Sbjct: 147  MILPWEREEEKEVVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVP 206

Query: 595  KAGVTQVILEKIHDKWRKAELVRLKFHETLAQDMKKAHEIVERRTGGLVIWRSGSVMVVY 774
            KAG+TQ ++EKIH +WRK ELVRLKFHE LA+DM+KAHEIVERRTGGLV WRSGSVM+VY
Sbjct: 207  KAGLTQEVMEKIHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVY 266

Query: 775  RGSNYERPSLRTQPVNMVVEGPFVPDVSSADHLAVEDDKISNSIPEKNQPTFQNPDPTEN 954
            RG +Y+ P  + +      +G FVPDVS       ED   + S  EK++   +  +  EN
Sbjct: 267  RGIDYQGPDSQKEVNEKKGDGFFVPDVSKR-----EDSSTATSTSEKSEVVVREREHPEN 321

Query: 955  MTEEEAEFNSLLDGLGPRFLDWWGTGLLPVDADLLPPFVPGYKTPFRLLPTGMRSRLTNA 1134
            M+E EAE+N+LLDGLGPRF+ WWGTG+LPVDADLLP  VPGYKTPFRLLPTGMRSRLTNA
Sbjct: 322  MSEAEAEYNALLDGLGPRFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNA 381

Query: 1135 EMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAEE 1314
            EMTNLRKL+KSLPCHFALGRNRNHQGLA AI+K+WEKSLV KIAVKRGIQNTNN+LMAEE
Sbjct: 382  EMTNLRKLAKSLPCHFALGRNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNELMAEE 441

Query: 1315 LKKLMGGTLLLRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDIEEEVRIGAVGIAT 1494
            LK L GGTLLLRNKY+I+IYRGKDF+PTSVAA LAER+ELTK+VQD+E++VR  AV    
Sbjct: 442  LKMLTGGTLLLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIP 501

Query: 1495 SEGFEGKAAAGTLAEFREAQARWGREISTEEHENMQEEASRAKTARIVRKIEHXXXXXXX 1674
                E  A AGTLAEF EAQARWGREIS EE E M EEA++ KTA++VR+IEH       
Sbjct: 502  LGQGEATAQAGTLAEFYEAQARWGREISPEEREKMVEEAAKTKTAKLVRQIEHKIFIAQT 561

Query: 1675 XXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIE 1854
                        E SMVPAGP  DQETITDEER MFR+VGLRMK YLPLGIRGVFDGV+E
Sbjct: 562  KKLRAEKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVE 621

Query: 1855 NMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALIYYRGKNYQ 2034
            NMHLHWKHRELVKL++KQKT++F++DTARLLEYESGGILVAIE+V K +ALIYYRGKNY+
Sbjct: 622  NMHLHWKHRELVKLMTKQKTVAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYK 681

Query: 2035 RPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEI 2175
            RPI++RPRNLLTK KALKR VAMQRHEALSQHI+ELE+TIE MK E+
Sbjct: 682  RPITLRPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKEL 728