BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00013778
         (557 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   175   8e-42
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   174   1e-41
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   173   3e-41
gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus...   172   4e-41
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,...   172   4e-41
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   172   4e-41
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   172   5e-41
ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,...   171   9e-41
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   171   9e-41
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   171   2e-40
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   169   3e-40
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     169   4e-40
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   168   1e-39
ref|XP_006287402.1| hypothetical protein CARUB_v10000608mg, part...   167   1e-39
ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phas...   166   3e-39
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]     166   3e-39
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   166   4e-39
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   166   4e-39
ref|XP_006847349.1| hypothetical protein AMTR_s00015p00252960 [A...   164   1e-38
ref|NP_197800.1| RNA polymerase sigma factor 5 [Arabidopsis thal...   164   2e-38

>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
           gi|462415472|gb|EMJ20209.1| hypothetical protein
           PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  175 bits (443), Expect = 8e-42
 Identities = 88/112 (78%), Positives = 94/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RASKPV SLH+RH TTQEE+INGITD+D V  D R++PA            LKPKESLVI
Sbjct: 407 RASKPVFSLHSRHTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVI 466

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 467 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 518


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
           gi|590673674|ref|XP_007038960.1| Sigma factor E isoform
           1 [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
           factor E isoform 1 [Theobroma cacao]
           gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
           [Theobroma cacao]
          Length = 516

 Score =  174 bits (441), Expect = 1e-41
 Identities = 89/112 (79%), Positives = 94/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RASKPV SLH+RH+ TQEE+INGITDID V  D R+QPA            LKPKESLVI
Sbjct: 404 RASKPVASLHSRHSVTQEEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVI 463

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 464 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
           gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
           [Glycine max]
          Length = 512

 Score =  173 bits (438), Expect = 3e-41
 Identities = 87/112 (77%), Positives = 94/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           +ASKP+LSLH+RH TTQEEYINGITD+D V  D R+Q A            LKPKESLVI
Sbjct: 400 KASKPILSLHSRHITTQEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVI 459

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 460 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARLDYLRRYV 511


>gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus guttatus]
          Length = 515

 Score =  172 bits (437), Expect = 4e-41
 Identities = 86/113 (76%), Positives = 95/113 (84%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           R SKP++SLHARH+ TQEE+INGITD+D V  D+RKQPA            LKPKE+LVI
Sbjct: 402 RVSKPIISLHARHSVTQEEFINGITDVDGVEGDRRKQPALLRLALDDVLDSLKPKENLVI 461

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 217
           RQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKH ARVDYLRRY+F
Sbjct: 462 RQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHRARVDYLRRYVF 514


>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform 2 [Solanum
           lycopersicum]
          Length = 487

 Score =  172 bits (437), Expect = 4e-41
 Identities = 88/113 (77%), Positives = 93/113 (82%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           + SKP+ SLHAR+ TTQEE INGITD+D V  DKRKQPA            LKPKESLVI
Sbjct: 375 KVSKPIFSLHARNKTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVI 434

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 217
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDY+RRYIF
Sbjct: 435 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 487


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform 1 [Solanum
           lycopersicum]
          Length = 516

 Score =  172 bits (437), Expect = 4e-41
 Identities = 88/113 (77%), Positives = 93/113 (82%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           + SKP+ SLHAR+ TTQEE INGITD+D V  DKRKQPA            LKPKESLVI
Sbjct: 404 KVSKPIFSLHARNKTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVI 463

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 217
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDY+RRYIF
Sbjct: 464 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  172 bits (436), Expect = 5e-41
 Identities = 89/113 (78%), Positives = 93/113 (82%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           + SKPV SLHAR+ TTQEE INGITD+D V  DKRKQPA            LKPKESLVI
Sbjct: 404 KVSKPVSSLHARNKTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVI 463

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 217
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDY+RRYIF
Sbjct: 464 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X3 [Glycine
           max]
          Length = 488

 Score =  171 bits (434), Expect = 9e-41
 Identities = 86/112 (76%), Positives = 94/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           +ASKP+LSLH+RH TTQEEYINGITD+D V  D R+Q A            LKPKESLVI
Sbjct: 376 KASKPILSLHSRHITTQEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVI 435

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISRE+VRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 436 RQRYGLDGKGDRTLGEIAGNLNISREIVRKHEVKALMKLKHPARLDYLRRYV 487


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X1 [Glycine
           max] gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
           polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X2 [Glycine
           max]
          Length = 512

 Score =  171 bits (434), Expect = 9e-41
 Identities = 86/112 (76%), Positives = 94/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           +ASKP+LSLH+RH TTQEEYINGITD+D V  D R+Q A            LKPKESLVI
Sbjct: 400 KASKPILSLHSRHITTQEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVI 459

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISRE+VRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 460 RQRYGLDGKGDRTLGEIAGNLNISREIVRKHEVKALMKLKHPARLDYLRRYV 511


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 520

 Score =  171 bits (432), Expect = 2e-40
 Identities = 87/112 (77%), Positives = 94/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RASKPV SL++RH+ TQEE+INGITD+D V  D R++PA            LKPKESLVI
Sbjct: 408 RASKPVFSLNSRHSVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVI 467

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI
Sbjct: 468 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 519


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|302143685|emb|CBI22546.3| unnamed protein product
           [Vitis vinifera]
          Length = 518

 Score =  169 bits (429), Expect = 3e-40
 Identities = 88/113 (77%), Positives = 95/113 (84%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RASK VLSLHARHATTQEEYINGITD++ V  D+ +Q A            LKPKESLV+
Sbjct: 406 RASKSVLSLHARHATTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVM 465

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 217
           RQRYGLDGKGDRTLGEIAGNL+ISREMVRKHEVKALMKLKHPARVDYLR+YIF
Sbjct: 466 RQRYGLDGKGDRTLGEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYIF 518


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  169 bits (428), Expect = 4e-40
 Identities = 86/112 (76%), Positives = 94/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RASKPV+SL++RH TTQEE+IN ITD+D V  D R++PA            LKPKESLVI
Sbjct: 405 RASKPVISLNSRHVTTQEEFINAITDVDGVDGDDRRKPALLRLALDDVLDSLKPKESLVI 464

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 465 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYM 516


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 501

 Score =  168 bits (425), Expect = 1e-39
 Identities = 88/112 (78%), Positives = 93/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RA+KP LSLHARHA TQEE+INGITDID    D R+QPA            LKPKESLVI
Sbjct: 391 RAAKPALSLHARHAVTQEEFINGITDIDGG--DNRRQPALLRLALDDVLDSLKPKESLVI 448

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKHPARVDYLRRY+
Sbjct: 449 RQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPARVDYLRRYV 500


>ref|XP_006287402.1| hypothetical protein CARUB_v10000608mg, partial [Capsella rubella]
           gi|482556108|gb|EOA20300.1| hypothetical protein
           CARUB_v10000608mg, partial [Capsella rubella]
          Length = 557

 Score =  167 bits (424), Expect = 1e-39
 Identities = 85/112 (75%), Positives = 93/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RA+KPV SL+++HA TQEE+INGITD+D V  D R+QPA            LKPKESLVI
Sbjct: 445 RAAKPVFSLNSKHAVTQEEFINGITDVDGVGADNRRQPALLRLALDDVLDSLKPKESLVI 504

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKH ARVDYLR+YI
Sbjct: 505 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHQARVDYLRQYI 556


>ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
           gi|561034810|gb|ESW33340.1| hypothetical protein
           PHAVU_001G061400g [Phaseolus vulgaris]
          Length = 511

 Score =  166 bits (421), Expect = 3e-39
 Identities = 83/112 (74%), Positives = 93/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           +ASKP++SLH+RH  TQEE+INGITD+D V  D R+Q A            LKPKESLV+
Sbjct: 399 KASKPIISLHSRHIVTQEEFINGITDLDGVDGDNRRQLAVLRLALDDVLDSLKPKESLVM 458

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 459 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARLDYLRRYV 510


>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
          Length = 511

 Score =  166 bits (421), Expect = 3e-39
 Identities = 84/112 (75%), Positives = 93/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RA+KPV SL+++H+ TQEE+INGITD+D V  D R+QPA            LKPKESLVI
Sbjct: 399 RAAKPVFSLNSKHSVTQEEFINGITDVDGVGADNRRQPAILRLALDDVLDSLKPKESLVI 458

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKH ARVDYLR+YI
Sbjct: 459 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHQARVDYLRQYI 510


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  166 bits (420), Expect = 4e-39
 Identities = 84/112 (75%), Positives = 92/112 (82%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RA+KPV SLH+RH+TT EE INGITD++    D R+QPA            LKPKESLVI
Sbjct: 403 RATKPVYSLHSRHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVI 462

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKG+RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 463 RQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 514


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  166 bits (420), Expect = 4e-39
 Identities = 84/112 (75%), Positives = 92/112 (82%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RA+KPV SLH+RH+TT EE INGITD++    D R+QPA            LKPKESLVI
Sbjct: 402 RATKPVYSLHSRHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVI 461

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKG+RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 462 RQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 513


>ref|XP_006847349.1| hypothetical protein AMTR_s00015p00252960 [Amborella trichopoda]
           gi|548850426|gb|ERN08930.1| hypothetical protein
           AMTR_s00015p00252960 [Amborella trichopoda]
          Length = 128

 Score =  164 bits (415), Expect = 1e-38
 Identities = 85/112 (75%), Positives = 90/112 (80%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RASKPV SL+A+H TTQEE +NG+ D+D V  DKRK  A            LKPKESLVI
Sbjct: 16  RASKPVFSLNAKHVTTQEELVNGVMDMDGVTGDKRKPAALLRLALDDVLDSLKPKESLVI 75

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTL EIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI
Sbjct: 76  RQRYGLDGKGDRTLSEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 127


>ref|NP_197800.1| RNA polymerase sigma factor 5 [Arabidopsis thaliana]
           gi|75267675|sp|Q9ZNX9.1|SIGE_ARATH RecName: Full=RNA
           polymerase sigma factor sigE,
           chloroplastic/mitochondrial; Short=Sigma factor E;
           Short=Sigma-E; AltName: Full=RNA polymerase sigma factor
           sig5; Short=Atsig5; Short=Sigma factor 5; Flags:
           Precursor gi|4033838|emb|CAA77213.1| sigma-like factor
           [Arabidopsis thaliana] gi|4972299|dbj|BAA78109.1| RNA
           polymerase sigma subunit SigE [Arabidopsis thaliana]
           gi|10178160|dbj|BAB11572.1| sigma-like factor
           [Arabidopsis thaliana] gi|222423237|dbj|BAH19595.1|
           AT5G24120 [Arabidopsis thaliana]
           gi|332005876|gb|AED93259.1| RNA polymerase sigma factor
           5 [Arabidopsis thaliana]
          Length = 517

 Score =  164 bits (414), Expect = 2e-38
 Identities = 83/112 (74%), Positives = 93/112 (83%)
 Frame = -3

Query: 555 RASKPVLSLHARHATTQEEYINGITDIDDVRVDKRKQPAXXXXXXXXXXXXLKPKESLVI 376
           RA+KPVLSL+++H+ TQEE+INGITD+D V  +  +QPA            LKPKESLVI
Sbjct: 405 RAAKPVLSLNSKHSVTQEEFINGITDVDGVGANNSRQPALLRLALDDVLDSLKPKESLVI 464

Query: 375 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
           RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKH ARVDYLR+YI
Sbjct: 465 RQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHQARVDYLRQYI 516