BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00013247
         (550 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF81447.1| NBS type disease resistance protein [Populus tric...   177   1e-49
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]      174   1e-49
gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]      173   3e-49
gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis c...   172   5e-49
gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis c...   171   7e-49
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle...   171   1e-48
gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wal...   171   2e-48
gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum]      171   2e-48
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...   170   2e-48
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   170   2e-48
gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis c...   170   3e-48
gb|AGH20682.1| reverse transcriptase, partial [Raphanus sativus]      170   3e-48
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...   169   4e-48
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   170   6e-48
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle...   169   6e-48
gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis c...   168   8e-48
gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]       169   1e-47
gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]      169   2e-47
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   167   2e-47
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle...   167   2e-47

>gb|ABF81447.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 972

 Score =  177 bits (448), Expect(2) = 1e-49
 Identities = 88/155 (56%), Positives = 117/155 (75%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K + G+++R+KA LVAK Y+Q+   DY EVFA VA +ET+RL+I  A     K +Q+DVK
Sbjct: 36  KNAKGEVQRYKARLVAKGYKQREGIDYGEVFAPVARLETIRLMISLAAQHRWKIYQLDVK 95

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG+L EE+YV+  +GY++ E + KVYKLKKALYGLKQ P AWN ++D++FQD G +
Sbjct: 96  SAFLNGFLEEEIYVEQPLGYIEAENKGKVYKLKKALYGLKQAPPAWNTRIDRYFQDNGFE 155

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HA+Y+K   A  ++L  CLYVDDLIFT NN
Sbjct: 156 KCPYEHAIYVKKG-ANGSILFACLYVDDLIFTGNN 189



 Score = 45.4 bits (106), Expect(2) = 1e-49
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = -1

Query: 544 IEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           IEKNDTW+L  + + +KAI VKWV+KTKK+
Sbjct: 8   IEKNDTWKLTYLPENKKAIGVKWVYKTKKN 37


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  174 bits (441), Expect(2) = 1e-49
 Identities = 91/155 (58%), Positives = 114/155 (73%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A  +  + HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN ++D++F + G  
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFNEKGFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+KT    + +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIKTQ--NNDILIACLYVDDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 1e-49
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = -1

Query: 544 IEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           I+KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 22  IQKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  173 bits (438), Expect(2) = 3e-49
 Identities = 91/155 (58%), Positives = 114/155 (73%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A  +  K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN +++++F+D    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFKDKSFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+KT    + +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIKTQ--NNDILIACLYVDDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 3e-49
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = -1

Query: 544 IEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           I+KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 22  IQKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score =  172 bits (437), Expect(2) = 5e-49
 Identities = 90/155 (58%), Positives = 115/155 (74%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ERHKA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERHKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNVWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L+EEVY++   GYV +  EDKV +L+KALYGLKQ PRAW+ ++D++F++    
Sbjct: 110 SAFLNGELDEEVYIEQPQGYVVKGEEDKVLRLRKALYGLKQAPRAWSTRIDKYFKEKNFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+KT    + +LI CLY+DDLIFT+NN
Sbjct: 170 KCPYEHALYIKTQ--NNDILIACLYIDDLIFTNNN 202



 Score = 47.8 bits (112), Expect(2) = 5e-49
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -1

Query: 550 QVIEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           + I KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 20  KAIRKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 286

 Score =  171 bits (434), Expect(2) = 7e-49
 Identities = 91/155 (58%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNEWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV KLKKALYGLKQ PRAWN ++D++F++    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIIKGEEDKVLKLKKALYGLKQAPRAWNTRIDKYFKEKDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQKDDILIACLYVDDLIFTGNN 202



 Score = 48.5 bits (114), Expect(2) = 7e-49
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = -1

Query: 544 IEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           I+KNDTWEL ++  GQKAI VKWV+K KK+
Sbjct: 22  IQKNDTWELVSLPNGQKAIGVKWVYKAKKN 51


>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  171 bits (433), Expect(2) = 1e-48
 Identities = 90/155 (58%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIILLAAQNKWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN ++D++F++    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQKDGILIACLYVDDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 1e-48
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 550 QVIEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           + I+KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 20  KAIKKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wallichii]
          Length = 315

 Score =  171 bits (432), Expect(2) = 2e-48
 Identities = 90/155 (58%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y QK   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQKAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKK LYGLKQ PRAWN ++D++F++    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKTLYGLKQAPRAWNTRIDKYFKEKKFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +  + +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQNNDLLIACLYVDDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 2e-48
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -1

Query: 550 QVIEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           + I+KNDTWELA +  G KAI VKWV+K KK+
Sbjct: 20  KAIQKNDTWELATLPNGHKAIGVKWVYKAKKN 51


>gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum]
          Length = 315

 Score =  171 bits (434), Expect(2) = 2e-48
 Identities = 90/155 (58%), Positives = 116/155 (74%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLIAT*RH*KF--HQIDVK 288
           K +NG+IER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I+     K+  HQ+DVK
Sbjct: 50  KNANGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWRIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG LNEEVY++   G++ +  EDKV +LKKALYGLKQ PRAWN +++++F++    
Sbjct: 110 SAFLNGDLNEEVYIEQPQGFIIKGEEDKVLRLKKALYGLKQAPRAWNTRIEKYFKEKDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+KT    + +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIKTQ--NNDILIACLYVDDLIFTGNN 202



 Score = 47.0 bits (110), Expect(2) = 2e-48
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = -1

Query: 544 IEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           I+KNDTWELA++  G KAI VKW++K KK+
Sbjct: 22  IQKNDTWELASLPNGHKAIGVKWMYKAKKN 51


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  170 bits (431), Expect(2) = 2e-48
 Identities = 90/155 (58%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN ++D++F++    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQKDDILIACLYVDDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 2e-48
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 550 QVIEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           + I+KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 20  KAIKKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  170 bits (431), Expect(2) = 2e-48
 Identities = 90/155 (58%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN ++D++F++    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQKDDILIACLYVDDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 2e-48
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 550 QVIEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           + I+KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 20  KAIKKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score =  170 bits (431), Expect(2) = 3e-48
 Identities = 91/155 (58%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ERHKA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERHKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNVWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  E KV KLKKALYGLKQ PRAWN ++D++F++    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEAKVLKLKKALYGLKQAPRAWNTRIDKYFKEQDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQKDDILIACLYVDDLIFTGNN 202



 Score = 47.8 bits (112), Expect(2) = 3e-48
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -1

Query: 550 QVIEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           + I KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 20  KAIRKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AGH20682.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  170 bits (430), Expect(2) = 3e-48
 Identities = 91/155 (58%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK   Q+   DY EVFA VA +ETVRL+I  A  +  K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGNSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN Q+D++F + G  
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTQIDKYFNEKGFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+KT    + +LI CLYV DLIFT NN
Sbjct: 170 KCPYEHALYIKTQ--NNDILIACLYVVDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 3e-48
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = -1

Query: 544 IEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           I+KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 22  IQKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  169 bits (428), Expect(2) = 4e-48
 Identities = 89/155 (57%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PR+WN ++D++F++    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRSWNTRIDKYFKEKDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQKDDILIACLYVDDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 4e-48
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 550 QVIEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           + I+KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 20  KAIKKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  170 bits (431), Expect(2) = 6e-48
 Identities = 90/155 (58%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461  KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
            K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 857  KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVK 916

Query: 287  SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
            SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN ++D++F++    
Sbjct: 917  SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFI 976

Query: 107  KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
            KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 977  KCPYEHALYIK--IQKEDILIACLYVDDLIFTGNN 1009



 Score = 46.6 bits (109), Expect(2) = 6e-48
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = -1

Query: 544 IEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           I+KNDTWEL ++  G KAI VKWV+K KK+
Sbjct: 829 IQKNDTWELTSLPNGHKAIGVKWVYKAKKN 858


>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  169 bits (427), Expect(2) = 6e-48
 Identities = 89/155 (57%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           S FLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN ++D++F++    
Sbjct: 110 STFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQKDDILIACLYVDDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 6e-48
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 550 QVIEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           + I+KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 20  KAIKKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score =  168 bits (425), Expect(2) = 8e-48
 Identities = 90/155 (58%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQRAVIDYDEVFAPVARLETVRLIISLAPQNKWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  E KV KLKKALYGLKQ PRAWN ++D++F++    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEAKVLKLKKALYGLKQAPRAWNTRIDKYFKEKDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQKDDILIACLYVDDLIFTGNN 202



 Score = 48.5 bits (114), Expect(2) = 8e-48
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = -1

Query: 544 IEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           I+KNDTWEL ++  GQKAI VKWV+K KK+
Sbjct: 22  IQKNDTWELVSLPNGQKAIGVKWVYKAKKN 51


>gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score =  169 bits (429), Expect(2) = 1e-47
 Identities = 89/155 (57%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q    DY EVFA VA +ETVRL+I  A     + HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQSAGIDYDEVFAPVARLETVRLIISLAAQNRWRIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN ++D++F++    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGKEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKSFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+KT    + +LI CLYVDDLIFT +N
Sbjct: 170 KCPYEHALYIKTQ--NNNILIACLYVDDLIFTGSN 202



 Score = 46.6 bits (109), Expect(2) = 1e-47
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = -1

Query: 544 IEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           I+KN+TWELA++  G KAI VKWV+K KK+
Sbjct: 22  IQKNETWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  169 bits (428), Expect(2) = 2e-47
 Identities = 89/153 (58%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
 Frame = -3

Query: 455 SNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVKSA 282
           S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A  +  + HQ+DVKSA
Sbjct: 52  SKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSA 111

Query: 281 FLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQKC 102
           FLNG L EEVY++   GY+ +  EDKV +LKKAL GLKQ PRAWN ++D++F++ G  KC
Sbjct: 112 FLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALNGLKQAPRAWNTRIDKYFKEKGFIKC 171

Query: 101 VYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
            Y+HALY+KT    + +LI CLYVDDLIFT NN
Sbjct: 172 PYEHALYIKTQ--NNDILIACLYVDDLIFTGNN 202



 Score = 46.2 bits (108), Expect(2) = 2e-47
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = -1

Query: 544 IEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           I+KNDTWELA++  G KAI VKWV+K K +
Sbjct: 22  IQKNDTWELASLPNGHKAIGVKWVYKAKNN 51


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  167 bits (423), Expect(2) = 2e-47
 Identities = 89/155 (57%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+KA LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN +++++F+     
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFKKKDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQKDDILIACLYVDDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 2e-47
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 550 QVIEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           + I+KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 20  KAIKKNDTWELASLPNGHKAIGVKWVYKAKKN 51


>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  167 bits (423), Expect(2) = 2e-47
 Identities = 89/155 (57%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 KKSNGDIERHKACLVAK*YEQKPEFDYQEVFAHVAHIETVRLLI--AT*RH*KFHQIDVK 288
           K S G++ER+K  LVAK Y Q+   DY EVFA VA +ETVRL+I  A     K HQ+DVK
Sbjct: 50  KNSKGEVERYKGRLVAKGYCQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVK 109

Query: 287 SAFLNGYLNEEVYVK*LVGYVKRECEDKVYKLKKALYGLKQTPRAWNKQMDQFFQDYGIQ 108
           SAFLNG L EEVY++   GY+ +  EDKV +LKKALYGLKQ PRAWN ++D++F++    
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFI 169

Query: 107 KCVYKHALYMKTDVATSAMLIVCLYVDDLIFTDNN 3
           KC Y+HALY+K  +    +LI CLYVDDLIFT NN
Sbjct: 170 KCPYEHALYIK--IQKDDILIACLYVDDLIFTGNN 202



 Score = 48.1 bits (113), Expect(2) = 2e-47
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 550 QVIEKNDTWELANILKGQKAIDVKWVFKTKKS 455
           + I+KNDTWELA++  G KAI VKWV+K KK+
Sbjct: 20  KAIKKNDTWELASLPNGHKAIGVKWVYKAKKN 51