BLASTX nr result

ID: Sinomenium21_contig00013177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00013177
         (378 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi...    61   9e-09
emb|CBI26320.3| unnamed protein product [Vitis vinifera]               61   9e-09
ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-07
ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-07
ref|XP_007034893.1| Pentatricopeptide repeat superfamily protein...    55   6e-07
ref|XP_004488126.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    52   5e-06
gb|EYU26974.1| hypothetical protein MIMGU_mgv1a024161mg [Mimulus...    53   6e-06

>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score = 60.8 bits (146), Expect(2) = 9e-09
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = -3

Query: 118 NRWDDLSRIRKVMKNQGDNKVPESSLIKIDGAKHEFVMG 2
           NRWDD+ R+RK+MK+ G NKVP SSL+++ GA HEF+MG
Sbjct: 435 NRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMG 473



 Score = 24.3 bits (51), Expect(2) = 9e-09
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1

Query: 153 NYVLLSNIYTSI 118
           NYVLLSN+Y SI
Sbjct: 423 NYVLLSNMYASI 434


>emb|CBI26320.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score = 60.8 bits (146), Expect(2) = 9e-09
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = -3

Query: 118 NRWDDLSRIRKVMKNQGDNKVPESSLIKIDGAKHEFVMG 2
           NRWDD+ R+RK+MK+ G NKVP SSL+++ GA HEF+MG
Sbjct: 367 NRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMG 405



 Score = 24.3 bits (51), Expect(2) = 9e-09
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1

Query: 153 NYVLLSNIYTSI 118
           NYVLLSN+Y SI
Sbjct: 355 NYVLLSNMYASI 366


>ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Solanum tuberosum]
          Length = 602

 Score = 57.0 bits (136), Expect(2) = 2e-07
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = -3

Query: 118 NRWDDLSRIRKVMKNQGDNKVPESSLIKIDGAKHEFVMG 2
           NRWDD+  +RK+MK+QG +K P SS++ IDGA HEF++G
Sbjct: 447 NRWDDVKHLRKLMKDQGIDKAPGSSIVDIDGAMHEFLIG 485



 Score = 23.5 bits (49), Expect(2) = 2e-07
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 153 NYVLLSNIYTSI 118
           NYVLLSN+Y S+
Sbjct: 435 NYVLLSNMYASL 446


>ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Solanum lycopersicum]
          Length = 602

 Score = 57.0 bits (136), Expect(2) = 2e-07
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = -3

Query: 118 NRWDDLSRIRKVMKNQGDNKVPESSLIKIDGAKHEFVMG 2
           NRWDD+ ++RK+MK+QG  K P SS++ IDGA HEF++G
Sbjct: 447 NRWDDVKQLRKLMKDQGIEKAPGSSIVDIDGAMHEFLIG 485



 Score = 23.5 bits (49), Expect(2) = 2e-07
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 153 NYVLLSNIYTSI 118
           NYVLLSN+Y S+
Sbjct: 435 NYVLLSNMYASL 446


>ref|XP_007034893.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508713922|gb|EOY05819.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 601

 Score = 54.7 bits (130), Expect(2) = 6e-07
 Identities = 21/39 (53%), Positives = 32/39 (82%)
 Frame = -3

Query: 118 NRWDDLSRIRKVMKNQGDNKVPESSLIKIDGAKHEFVMG 2
           +RW+D  R+RK+MK+ G NK+P SSL++++GA HEF+ G
Sbjct: 446 DRWEDAKRVRKLMKDHGINKIPGSSLVEVNGAMHEFLTG 484



 Score = 24.3 bits (51), Expect(2) = 6e-07
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1

Query: 153 NYVLLSNIYTSI 118
           NYVLLSN+Y SI
Sbjct: 434 NYVLLSNMYASI 445


>ref|XP_004488126.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g43790-like, partial [Cicer arietinum]
          Length = 632

 Score = 52.0 bits (123), Expect(2) = 5e-06
 Identities = 21/38 (55%), Positives = 31/38 (81%)
 Frame = -3

Query: 115 RWDDLSRIRKVMKNQGDNKVPESSLIKIDGAKHEFVMG 2
           RWDD++R+R VMK+ G NK+P  SL++I+G+ HEF+ G
Sbjct: 478 RWDDVNRVRMVMKHNGVNKLPGFSLVEINGSMHEFLTG 515



 Score = 23.9 bits (50), Expect(2) = 5e-06
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 153 NYVLLSNIYTSI 118
           NYVLLSN+Y S+
Sbjct: 465 NYVLLSNMYASV 476


>gb|EYU26974.1| hypothetical protein MIMGU_mgv1a024161mg [Mimulus guttatus]
          Length = 591

 Score = 53.1 bits (126), Expect(2) = 6e-06
 Identities = 19/39 (48%), Positives = 33/39 (84%)
 Frame = -3

Query: 118 NRWDDLSRIRKVMKNQGDNKVPESSLIKIDGAKHEFVMG 2
           N+W+D+ R+R++MK +G +K P SSL+++DG+ HEF++G
Sbjct: 436 NKWEDVKRVRELMKEKGVDKTPGSSLVEVDGSMHEFLIG 474



 Score = 22.3 bits (46), Expect(2) = 6e-06
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 153 NYVLLSNIY 127
           NYVLLSNIY
Sbjct: 424 NYVLLSNIY 432


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