BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00012484
         (1018 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB00038.1| reverse transcriptase family member [Glycine max]       50   1e-07
emb|CCH50976.1| T4.15 [Malus x robusta]                                47   1e-06

>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 50.1 bits (118), Expect(3) = 1e-07
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = +1

Query: 91  NEHIREMVGVAPIGDKMRENLLR*FGYIQQRPLDVLIRK 207
           NE IRE VGVAPI +KM EN LR FG++++RP+D ++R+
Sbjct: 285 NEAIRERVGVAPIVEKMVENRLRWFGHVERRPVDSVLRR 323



 Score = 31.2 bits (69), Expect(3) = 1e-07
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 17  KKNTSVT*M*MLRWICGKTLKDKIK 91
           +    V  M MLRW+CGKT +DKI+
Sbjct: 260 ENKVGVAEMRMLRWMCGKTRQDKIR 284



 Score = 21.2 bits (43), Expect(3) = 1e-07
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 320 LAFDRVKRRKWIHIANP 370
           +  DR   RK IH+A+P
Sbjct: 360 MVLDRTLWRKLIHVADP 376


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 47.4 bits (111), Expect(3) = 1e-06
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = +1

Query: 91   NEHIREMVGVAPIGDKMRENLLR*FGYIQQRPLDVLIRK 207
            NE IR  VGVA I  KMREN LR FG++Q+RP D  IR+
Sbjct: 893  NEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRR 931



 Score = 30.0 bits (66), Expect(3) = 1e-06
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 41  M*MLRWICGKTLKDKIK 91
           M MLRW+CG T KDKI+
Sbjct: 876 MRMLRWMCGHTRKDKIR 892



 Score = 21.6 bits (44), Expect(3) = 1e-06
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 317  DLAFDRVKRRKWIHIANP 370
            D+  DR + R  IHIA+P
Sbjct: 967  DMTQDRAQWRSKIHIADP 984