BLASTX nr result
ID: Sinomenium21_contig00012305
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium21_contig00012305 (1594 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 340 1e-90 dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 309 3e-81 ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobro... 307 1e-80 ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro... 307 1e-80 dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 301 4e-79 dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 301 4e-79 dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 300 9e-79 gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus... 286 2e-74 ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 284 9e-74 ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr... 280 2e-72 ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ... 278 6e-72 ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr... 274 7e-71 ref|XP_006857525.1| hypothetical protein AMTR_s00061p00026580, p... 274 9e-71 ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis... 273 1e-70 gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g... 269 3e-69 ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [A... 263 1e-67 ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 263 2e-67 ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife... 261 6e-67 gb|EPS68250.1| hypothetical protein M569_06521 [Genlisea aurea] 253 1e-64 ref|XP_007020667.1| DNA topoisomerase I alpha isoform 4, partial... 252 4e-64 >dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] Length = 894 Score = 340 bits (872), Expect = 1e-90 Identities = 209/467 (44%), Positives = 250/467 (53%), Gaps = 15/467 (3%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTASKQNQLKSEINNLTSPKHDGSSQRHVPGA 418 MAV AC+K K + + D+D D P+VFKR+ SK NQL S+ +S ++DG S R V Sbjct: 1 MAVQACVKEKMMDEIDED-DEPLVFKRSNATSKHNQLNSDTKK-SSQRYDGQSGRQVSDV 58 Query: 419 PSPNGQSSSSQKGNL---------VSSANVSTG---KSTVANSKVPPAVAEXXXXXXXXX 562 PS NGQSSS+ KG ++S ST S VAN KV + + Sbjct: 59 PSTNGQSSSASKGKTTKLSSMKSPIASPKASTSFAKASPVANPKVSSSSDDRSKHSSKQN 118 Query: 563 XXXXDMEKKPSVGRGADSE-DSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXX 739 E+K V A+ DS+D+KPLS RL Sbjct: 119 TINVVKEEKELVNPAAEPYGDSEDEKPLSARLFTGLTKGSSNNANKGLINSSPASLPVPK 178 Query: 740 XXXXXXXXXEDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQNGSSKNNEMV 919 +D +D+IPLSSKFR+K++ + KS++SD+ K L S FQQNGS Sbjct: 179 PEINRYS--DDSDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNGSINRGSKS 236 Query: 920 KPKVLNKRPLSDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDD--DDHVPIGQRM 1093 KV NKRPL ++ SS QSSVKKPKLS S P KQ S KAEPK DD DDHVPI QRM Sbjct: 237 SIKV-NKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDDHVPISQRM 295 Query: 1094 KKPAASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGSGEGQKWSTL 1273 KK A S N PP SGEG+KW+TL Sbjct: 296 KKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYSKSSKVPPSSGEGKKWNTL 355 Query: 1274 VHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATKPKFIENFMNDW 1453 VH+GVIFPPPYKPHGVKMLY G+PVDLTPEQEEVATMFAVM +TDY TK KF ENFM+DW Sbjct: 356 VHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMTKSKFKENFMDDW 415 Query: 1454 RQILGKNHLIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 R+ILGKNH+I+ E CDFTPIY LKEE+ Sbjct: 416 RKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKVLKEER 462 >dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] Length = 910 Score = 309 bits (791), Expect = 3e-81 Identities = 199/494 (40%), Positives = 244/494 (49%), Gaps = 42/494 (8%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTASKQNQLKSEINNLTSPKHDGSSQRHVPGA 418 MAV+AC P D D+D D P+VFKR +ASKQ+Q SE ++S K DG S R + + Sbjct: 1 MAVEACPTPNLRDDMDED-DEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDS 59 Query: 419 PSPNGQSSSSQKGNLV---------------------------------SSANVSTGKST 499 NG+SSS QKG +V SSA S S Sbjct: 60 RPANGESSSGQKGRMVPPSKPSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKKSPVSSL 119 Query: 500 VANSKVPPAVAEXXXXXXXXXXXXXDMEKKPSVGRGA-----DSEDSDDDKPLSIRLXXX 664 ANSK + + E+K S R A DSEDSDD KPLS+R Sbjct: 120 PANSKPSTSGSFKVKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLR---- 175 Query: 665 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLEDDIPLSSKFRVKSSGASMFKKS 844 ED +D+ PLSS+F +KS K+ Sbjct: 176 ------------HSASSSKGNTNQVSKEGSKPENEDSDDEKPLSSRFPLKSGVGESTSKA 223 Query: 845 FDSDEEKPLASRFQQNGSSKNNEMVKP--KVLNKRPLSDINSSDQSSVKKPKLSYGSVPA 1018 +DSD++KPLA + Q NGS+ + + NKRP DI SS+Q SVKKPKLS + P Sbjct: 224 YDSDDDKPLAKKLQHNGSAMRDGQPNKYSNMSNKRPPGDIKSSNQLSVKKPKLSSVTAPT 283 Query: 1019 KVKQVSVKAEPKT--DDDDHVPIGQRMKKPAASDNXXXXXXXXXXXXXXXXXXXXXXXXX 1192 KQ SVK EPK DDDDH+PI QR+KK S++ Sbjct: 284 NKKQASVKPEPKAEDDDDDHLPISQRIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKK 343 Query: 1193 XXXXXXXXXXXXXXPPGSGEGQKWSTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEE 1372 PP SGEG+KW+ L H+GVIFPPPYKPHG+KMLY G+PVDLTPEQEE Sbjct: 344 VMKNSKYSKSSKV-PPSSGEGKKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEE 402 Query: 1373 VATMFAVMKETDYATKPKFIENFMNDWRQILGKNHLIKKFELCDFTPIYXXXXXXXXXXX 1552 VATMFAVM +TDY KP+F ENF DW++ILGKNH+I+ E CDF+PIY Sbjct: 403 VATMFAVMLDTDYMNKPRFKENFFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKK 462 Query: 1553 XXXXXXXXALKEEK 1594 ALKEEK Sbjct: 463 QMTTEEKKALKEEK 476 >ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao] gi|590606159|ref|XP_007020668.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao] gi|508720294|gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao] gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao] Length = 836 Score = 307 bits (786), Expect = 1e-80 Identities = 197/478 (41%), Positives = 240/478 (50%), Gaps = 26/478 (5%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTAS-KQNQLKSEINNLTSPKHDGSSQRHVPG 415 MAV+A K + D DDD+DGPVVFKR T+S KQNQL SE+ +S + DG S R V Sbjct: 1 MAVEAPAKHVYDFD-DDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSD 59 Query: 416 APSPNGQSSSSQKGNLVSS--------------ANVSTGKSTVANSKVPPAVAEXXXXXX 553 SPNGQSS++ K +SS A+ S+ K+ S V A Sbjct: 60 VRSPNGQSSNAPKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQ 119 Query: 554 XXXXXXXDMEKKPSVGRG---------ADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXX 706 +M GR +D +D DD PLS RL Sbjct: 120 SKQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPA 179 Query: 707 XXXXXXXXXXXXXXXXXXXXEDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQ 886 ED +D+ PLS++F VKS+ + + D DE+KPLAS+ Q Sbjct: 180 QSRRLVPKTEVKVSA-----EDPDDEAPLSARFNVKSNTGTSSSRLHDCDEKKPLASKIQ 234 Query: 887 QNGSSKNNEMVKPKVLN-KRPLSDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDD 1063 QNGS + L+ KRPL NSSD SS KKPK S K KQV+VKAE +D Sbjct: 235 QNGSIMKGKQQNSSTLSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADED 294 Query: 1064 DDHVPIGQRMKKPAASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPG 1243 DDH+PI QRMKK AS++ PP Sbjct: 295 DDHMPIAQRMKKSTASNSKLSSMKQKTTKVVSSSFKKINKKSKKEMKSSKYIKSTKVPPS 354 Query: 1244 SGEGQK-WSTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATK 1420 SG+GQK WSTLVH+GVIFP PY PHGVKMLY+G+PVDLTPEQEEVATMFAVMK+TDY +K Sbjct: 355 SGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMSK 414 Query: 1421 PKFIENFMNDWRQILGKNHLIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 +F +NF DW ++LGKNH IK + CDFTPIY ALKEEK Sbjct: 415 TQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEK 472 >ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao] gi|590606147|ref|XP_007020665.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao] gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao] Length = 904 Score = 307 bits (786), Expect = 1e-80 Identities = 197/478 (41%), Positives = 240/478 (50%), Gaps = 26/478 (5%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTAS-KQNQLKSEINNLTSPKHDGSSQRHVPG 415 MAV+A K + D DDD+DGPVVFKR T+S KQNQL SE+ +S + DG S R V Sbjct: 1 MAVEAPAKHVYDFD-DDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSD 59 Query: 416 APSPNGQSSSSQKGNLVSS--------------ANVSTGKSTVANSKVPPAVAEXXXXXX 553 SPNGQSS++ K +SS A+ S+ K+ S V A Sbjct: 60 VRSPNGQSSNAPKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQ 119 Query: 554 XXXXXXXDMEKKPSVGRG---------ADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXX 706 +M GR +D +D DD PLS RL Sbjct: 120 SKQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPA 179 Query: 707 XXXXXXXXXXXXXXXXXXXXEDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQ 886 ED +D+ PLS++F VKS+ + + D DE+KPLAS+ Q Sbjct: 180 QSRRLVPKTEVKVSA-----EDPDDEAPLSARFNVKSNTGTSSSRLHDCDEKKPLASKIQ 234 Query: 887 QNGSSKNNEMVKPKVLN-KRPLSDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDD 1063 QNGS + L+ KRPL NSSD SS KKPK S K KQV+VKAE +D Sbjct: 235 QNGSIMKGKQQNSSTLSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADED 294 Query: 1064 DDHVPIGQRMKKPAASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPG 1243 DDH+PI QRMKK AS++ PP Sbjct: 295 DDHMPIAQRMKKSTASNSKLSSMKQKTTKVVSSSFKKINKKSKKEMKSSKYIKSTKVPPS 354 Query: 1244 SGEGQK-WSTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATK 1420 SG+GQK WSTLVH+GVIFP PY PHGVKMLY+G+PVDLTPEQEEVATMFAVMK+TDY +K Sbjct: 355 SGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMSK 414 Query: 1421 PKFIENFMNDWRQILGKNHLIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 +F +NF DW ++LGKNH IK + CDFTPIY ALKEEK Sbjct: 415 TQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEK 472 >dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] Length = 925 Score = 301 bits (772), Expect = 4e-79 Identities = 203/501 (40%), Positives = 241/501 (48%), Gaps = 49/501 (9%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTASKQNQLKSEINNLTSPKHDGSSQRHVPGA 418 MAV+AC + D +DD GPV+FKR+K A KQNQ SE L+ K DG S H Sbjct: 1 MAVEACTT-NLMEDMEDDG-GPVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDV 58 Query: 419 PSPNGQSSSSQKGNLVSSANVSTGKSTV-------------------ANSKVPPAVAEXX 541 NG+SSS+QKG + SA KS + ANSK + Sbjct: 59 RPANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTA 118 Query: 542 XXXXXXXXXXXDMEKKPSVGRG---ADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXX 712 +E KPSV ++SE SDD+KPLS R Sbjct: 119 KQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDS 178 Query: 713 XXXXXXXXXXXXXXXXXXEDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQN 892 ED ED+ PLS +F KSS KS+DSDE+KPLA++ QQN Sbjct: 179 CSIRRPVIEES-------EDSEDEKPLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQN 231 Query: 893 GS-SKNNEMVKPKVL-NKRPLSDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKT--- 1057 GS S++ M K L NKRP + S +QSSVKKPKLS KQ +VK EPK Sbjct: 232 GSASRDGPMNKSASLSNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAEDD 291 Query: 1058 ----------------------DDDDHVPIGQRMKKPAASDNXXXXXXXXXXXXXXXXXX 1171 DDDD+VPI QR+KK AS + Sbjct: 292 DDNIPLSQRGKKSQSATSKPKDDDDDNVPISQRIKKSPASVSKSSVPVKKASTVVSSSLK 351 Query: 1172 XXXXXXXXXXXXXXXXXXXXXPPGSGEGQKWSTLVHSGVIFPPPYKPHGVKMLYNGQPVD 1351 PPGSGEGQKW+TLVH+GVIFPPPYKPHGVKMLY QP+ Sbjct: 352 KVNKNSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPIT 411 Query: 1352 LTPEQEEVATMFAVMKETDYATKPKFIENFMNDWRQILGKNHLIKKFELCDFTPIYXXXX 1531 LTPEQEEVATMFAVM +TDY KP F ENF +DW++ILGKNH+I+ E CDF PIY Sbjct: 412 LTPEQEEVATMFAVMLDTDYMNKPCFKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQ 471 Query: 1532 XXXXXXXXXXXXXXXALKEEK 1594 ALKEEK Sbjct: 472 QEKEKKKQMTTEEKKALKEEK 492 >dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] Length = 920 Score = 301 bits (772), Expect = 4e-79 Identities = 198/501 (39%), Positives = 243/501 (48%), Gaps = 49/501 (9%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTASKQNQLKSEINNLTSPKHDGSSQRHVPGA 418 MAV+AC + D +DD +GPV+FKR+ ASKQNQ SE L+ KH G S H Sbjct: 1 MAVEACTTTNLMEDMEDD-EGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDV 59 Query: 419 PSPNGQSSSSQKGNLVSSANVSTGKSTV-------------------ANSKVPPAVAEXX 541 NG++SS+QKG + SA KS + ANSK + Sbjct: 60 RPANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTA 119 Query: 542 XXXXXXXXXXXDMEKKPSVGRG---ADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXX 712 +E KPSV ++SE SDD+KPLS R Sbjct: 120 KQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDS 179 Query: 713 XXXXXXXXXXXXXXXXXXEDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQN 892 ED ED+ PLS +F KSS KS+DSDE+KPLA++ Q N Sbjct: 180 CSIRRPVIEES-------EDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPN 232 Query: 893 GS-SKNNEMVKPKVL-NKRPLSDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDDD 1066 GS S+++ M K L NKRP ++ S +QSS+KKPKLS KQ +VK EPK +DD Sbjct: 233 GSASRDSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDD 292 Query: 1067 D-------------------------HVPIGQRMKKPAASDNXXXXXXXXXXXXXXXXXX 1171 D +VPI QR+KK AS + Sbjct: 293 DDNIPLSQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLK 352 Query: 1172 XXXXXXXXXXXXXXXXXXXXXPPGSGEGQKWSTLVHSGVIFPPPYKPHGVKMLYNGQPVD 1351 PPGSGEGQKW+TLVH+GVIFPPPYKPHGVKMLY QP+ Sbjct: 353 KVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPIT 412 Query: 1352 LTPEQEEVATMFAVMKETDYATKPKFIENFMNDWRQILGKNHLIKKFELCDFTPIYXXXX 1531 LTPEQEEVATMFAVM +TDY KP+F ENF +DW+++LGKNH I+ E CDF PIY Sbjct: 413 LTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQ 472 Query: 1532 XXXXXXXXXXXXXXXALKEEK 1594 ALKEEK Sbjct: 473 QEKEKKKQMTTEEKKALKEEK 493 >dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra] Length = 920 Score = 300 bits (769), Expect = 9e-79 Identities = 197/501 (39%), Positives = 243/501 (48%), Gaps = 49/501 (9%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTASKQNQLKSEINNLTSPKHDGSSQRHVPGA 418 MAV+AC + D +DD +GPV+FKR+ ASKQNQ SE L+ +H G S H Sbjct: 1 MAVEACTTTNLMEDMEDD-EGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDV 59 Query: 419 PSPNGQSSSSQKGNLVSSANVSTGKSTV-------------------ANSKVPPAVAEXX 541 NG++SS+QKG + SA KS + ANSK + Sbjct: 60 RPANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSAGANSKPSASATSTA 119 Query: 542 XXXXXXXXXXXDMEKKPSVGRG---ADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXX 712 +E KPSV ++SE SDD+KPLS R Sbjct: 120 KQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDS 179 Query: 713 XXXXXXXXXXXXXXXXXXEDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQN 892 ED ED+ PLS +F KSS KS+DSDE+KPLA++ Q N Sbjct: 180 CSIRRPVIEES-------EDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPN 232 Query: 893 GS-SKNNEMVKPKVL-NKRPLSDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDDD 1066 GS S+++ M K L NKRP ++ S +QSS+KKPKLS KQ +VK EPK +DD Sbjct: 233 GSASRDSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDD 292 Query: 1067 D-------------------------HVPIGQRMKKPAASDNXXXXXXXXXXXXXXXXXX 1171 D +VPI QR+KK AS + Sbjct: 293 DDNIPLSQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLK 352 Query: 1172 XXXXXXXXXXXXXXXXXXXXXPPGSGEGQKWSTLVHSGVIFPPPYKPHGVKMLYNGQPVD 1351 PPGSGEGQKW+TLVH+GVIFPPPYKPHGVKMLY QP+ Sbjct: 353 KVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPIT 412 Query: 1352 LTPEQEEVATMFAVMKETDYATKPKFIENFMNDWRQILGKNHLIKKFELCDFTPIYXXXX 1531 LTPEQEEVATMFAVM +TDY KP+F ENF +DW+++LGKNH I+ E CDF PIY Sbjct: 413 LTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQ 472 Query: 1532 XXXXXXXXXXXXXXXALKEEK 1594 ALKEEK Sbjct: 473 QEKEKKKQMTTEEKKALKEEK 493 >gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus guttatus] Length = 883 Score = 286 bits (731), Expect = 2e-74 Identities = 182/465 (39%), Positives = 236/465 (50%), Gaps = 13/465 (2%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTASKQNQLKSEINNLTSPKHDGSSQRHVPGA 418 M V+A + D DDD+D P+VFKR+ ++SK Q + E N L+S KH+ R Sbjct: 1 MTVEAREDKNMMEDMDDDDDAPLVFKRSGSSSKPKQSEPE-NKLSSQKHNAQVGRQSSDV 59 Query: 419 PSPNGQSSSSQKGNLVSSANVSTGKSTVANSKVPPAVAEXXXXXXXXXXXXXDMEKKPSV 598 NG ++++QKG V+S+ S+ K V S V P + D+ KPS Sbjct: 60 RPQNGTNANAQKGKSVTSS--SSMKPPVRPSLVSPKSSNSSVKASPIKSP--DVNSKPST 115 Query: 599 G------------RGADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 742 + +SEDS+DDKPLS R Sbjct: 116 SVVGESKSVKSTIKEENSEDSEDDKPLSAR--------QVAGSSKNNPNQTNKPNAPNLG 167 Query: 743 XXXXXXXXEDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQNGSSKNNEMVK 922 ED +D+IPLS+KF+ KS+ + +S S+E+KPL +R S + E Sbjct: 168 KKSNVPKPEDSDDEIPLSAKFQGKSNAGASTSRSSHSEEKKPLVARKPDKNGSASTERKP 227 Query: 923 PKVLNKRPLSDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDDD-DHVPIGQRMKK 1099 VL KRP + S+ QS++KKPKLS S+ +K K+ SVK E K +DD D VP+ QR KK Sbjct: 228 STVLQKRPADGVASAGQSNLKKPKLS-DSLASKDKKASVKPEVKAEDDEDLVPLSQRTKK 286 Query: 1100 PAASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGSGEGQKWSTLVH 1279 + PP SG+GQKW+TLVH Sbjct: 287 STTPEKKPSPALKTNNKTNSKTNSKTNKKSKQVSKDNNYSKSSKLPPSSGDGQKWTTLVH 346 Query: 1280 SGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATKPKFIENFMNDWRQ 1459 +GVIFPPPYKPHGVKMLY G+PV+LTPEQEEVATM+AVM ETDY KP+F ENFM DW++ Sbjct: 347 NGVIFPPPYKPHGVKMLYKGKPVNLTPEQEEVATMYAVMLETDYLKKPQFKENFMTDWKK 406 Query: 1460 ILGKNHLIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 ILGKNH+I+ E CDFTPIY ALKEEK Sbjct: 407 ILGKNHVIQSLEHCDFTPIYEWHQREKEKKKQMSTDEKKALKEEK 451 >ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera] Length = 883 Score = 284 bits (726), Expect = 9e-74 Identities = 189/459 (41%), Positives = 230/459 (50%), Gaps = 22/459 (4%) Frame = +2 Query: 284 DDDNDGPVVFKRTKTASKQNQ----------LKSEINNLTSPKHDGSSQRHVPGAPSPNG 433 D ++D P+ K + K N L+S+ + K DG S+ VP Sbjct: 18 DSEDDKPLSAKLSARLPKGNSHVLKGLSSPVLQSQKTKVDVKKSDGDSEDEVP------- 70 Query: 434 QSSSSQKGNLVSSANVSTGKSTVANSKVPPAVAEXXXXXXXXXXXXXDMEKKPSVGRGAD 613 S K L + S+GKS + P+++ + VG Sbjct: 71 ---LSSKFPLKTYVRSSSGKSLGSKGLNSPSLSSHPP--------------ETKVGVKES 113 Query: 614 SEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---EDLEDD 784 S+DS+D+ PL ++L +D ED+ Sbjct: 114 SDDSEDEIPLLLKLQLKSRKGASSSKLLDSKGLSSPASSRPQSQKAKVNNKNLSDDSEDE 173 Query: 785 IPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQNG-SSKNNEMVK-PKVLNKRPLSDI 958 IPLSSKFR+K+ + K + DE+KPL S + NG S K++E VK PK NKRPL Sbjct: 174 IPLSSKFRLKTGMGASLDKLDNFDEKKPLTSTLKPNGISKKDDERVKSPKGQNKRPLGQA 233 Query: 959 NSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDDDD-------HVPIGQRMKKPAASDN 1117 N+S SS KKPKL GSV KVKQVSVKAE K DDDD + P +R+KK +SDN Sbjct: 234 NTSHHSSSKKPKLLDGSVKGKVKQVSVKAEQKDDDDDDNDDDDEYTPTVKRLKKSVSSDN 293 Query: 1118 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGSGEGQKWSTLVHSGVIFP 1297 PP SGEGQKW+TL H+GVIFP Sbjct: 294 KKASKTKVIPSSRKKATKKAKKSKKLAKSSKYSKSTKV-PPNSGEGQKWTTLEHNGVIFP 352 Query: 1298 PPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATKPKFIENFMNDWRQILGKNH 1477 PPYKPHGVKMLYNG+PVDLTPEQEEVATMFAVMK+TDYATKP+FIENFMNDWR LGKNH Sbjct: 353 PPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKNH 412 Query: 1478 LIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 +IKKFELCDFTPIY ALKEEK Sbjct: 413 VIKKFELCDFTPIYEWHEKEKEKKKQMTTEEKKALKEEK 451 >ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa] gi|222847602|gb|EEE85149.1| DNA topoisomerase family protein [Populus trichocarpa] Length = 877 Score = 280 bits (715), Expect = 2e-72 Identities = 176/455 (38%), Positives = 226/455 (49%), Gaps = 11/455 (2%) Frame = +2 Query: 263 PKFLGDCDDDNDGPVVFKRT-KTASKQNQLKSEINNLTSPKHDGSSQ-----RHVPGAPS 424 P D DDD+DGP+VFKR + SKQNQL E +S + + Q + PS Sbjct: 11 PNNFNDDDDDDDGPIVFKRGGNSTSKQNQLNPEAKKPSSSSQNSNGQSLNLQKGKSPIPS 70 Query: 425 PNGQSSSSQKGN---LVSSANVSTGKSTVANSKVPPAVAEXXXXXXXXXXXXXDMEKKPS 595 N S G+ SSA S KS + ++ + + E+ S Sbjct: 71 SNASPMKSSTGSPKASASSAKASPLKSPLTYTRALTSSNDQLKQASKQVVSNAVKEETKS 130 Query: 596 VGRGADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDL 775 + D EDS+DDKPLS R+ Sbjct: 131 I---VDDEDSEDDKPLSSRIKGSTNNVNKGVTAPAHVKDEPSD----------------- 170 Query: 776 EDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQNGSSKNNEMVKPKVL-NKRPLS 952 +D++PLSS+F +KS+ + KS S E +P S+ Q NGS+KN++ K V+ KRP+ Sbjct: 171 DDEVPLSSRFAMKSNAGTSSSKSIRSSEIRPFPSKSQLNGSTKNDKQQKSSVVPTKRPMD 230 Query: 953 DINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDDDDHVPIGQRMKKPAASDNXXXXX 1132 + S+ SS KKPKL KVKQV+VK E K DDDDH+ I QRMKK +S N Sbjct: 231 NKVPSNHSSAKKPKLLDACTTTKVKQVTVKVEQKADDDDHLTISQRMKKADSSANKSSFA 290 Query: 1133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGSGEGQK-WSTLVHSGVIFPPPYK 1309 PGS +GQK W+TLVH+GVIFPPPYK Sbjct: 291 KKKVTKVVSSSLKKTTQKNKKQMKNSKYSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYK 350 Query: 1310 PHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATKPKFIENFMNDWRQILGKNHLIKK 1489 PHGVK+LY G+P+DLTPEQEEVATMFAVMK+TDY KP+F +NF NDWR++LGKNH+I+K Sbjct: 351 PHGVKILYKGKPIDLTPEQEEVATMFAVMKDTDYVQKPQFRQNFWNDWRKLLGKNHVIQK 410 Query: 1490 FELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 + CDF PIY LKEEK Sbjct: 411 LDDCDFNPIYEWHQQEKEKKKQMSTEEKKVLKEEK 445 >ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis] gi|223531500|gb|EEF33331.1| DNA topoisomerase type I, putative [Ricinus communis] Length = 891 Score = 278 bits (710), Expect = 6e-72 Identities = 185/477 (38%), Positives = 235/477 (49%), Gaps = 24/477 (5%) Frame = +2 Query: 236 TMAVDACIKPKFLGDCDDDNDGPVVFKR-TKTASKQNQLKSEINN--LTSPKHDGSSQRH 406 TMA A KP +DD+D P+VFKR + +KQNQ E+ L+S +G S Sbjct: 2 TMAAPATAKPNIYEYDEDDDDMPLVFKRGNNSTTKQNQSNPEVKKPLLSSQNSNGQSSNA 61 Query: 407 VPGAPSPNGQSSSSQKGNL------VSSANVSTGKSTVANSKVPPAVAEXXXXXXXXXXX 568 G + +S K + SSA S +S VANSK ++ E Sbjct: 62 QKGKSTVPSLKASPVKSPIGSPKASTSSAKASPLRSPVANSKGSSSLDEQLKQASKQNAS 121 Query: 569 XXDME---KKPSVG---------RGADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXX 712 + KP +G D EDS+DD PLS R Sbjct: 122 NVVKDVSSAKPEIGLKSVKHETKSNGDDEDSEDDLPLSAR------------------RK 163 Query: 713 XXXXXXXXXXXXXXXXXXEDLEDD-IPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQ 889 ED +DD +PL S+F +KS+ + K + E+KPL S+ QQ Sbjct: 164 GNTNNVSKVVTAPKRVKDEDSDDDKVPLCSRFPMKSTAGTSGNKPNNISEKKPLPSKVQQ 223 Query: 890 NGS-SKNNEMVKPKVLNKRPLSDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDDD 1066 NGS SK+ + P + KRPL NSS+QSS+KKPKLS GS KVKQ +VKAE DD Sbjct: 224 NGSTSKDKQQKAPLIPTKRPLDKANSSEQSSIKKPKLSAGSTITKVKQATVKAEE--DDP 281 Query: 1067 DHVPIGQRMKKPAASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGS 1246 D +PI QR K +S++ P S Sbjct: 282 DDIPIAQRKKSLGSSESKLSSAKQKAIKVVSSSFKKPIKKNKKQMKNTKYSKSTKVQPSS 341 Query: 1247 GEGQK-WSTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATKP 1423 +GQK W+TL+H+GVIFPPPYKPHG+K+LY G+PVDL PEQEEVATMFAVMK+TDY KP Sbjct: 342 TDGQKKWTTLIHNGVIFPPPYKPHGIKILYKGRPVDLAPEQEEVATMFAVMKDTDYMQKP 401 Query: 1424 KFIENFMNDWRQILGKNHLIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 KF+ENF NDWR++LG+NH+I+K E CDFTPIY A KEEK Sbjct: 402 KFLENFWNDWRKLLGRNHVIQKLEDCDFTPIYEWHEREKEKKKQMSTEEKKAQKEEK 458 >ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa] gi|222860420|gb|EEE97967.1| DNA topoisomerase family protein [Populus trichocarpa] Length = 860 Score = 274 bits (701), Expect = 7e-71 Identities = 180/448 (40%), Positives = 226/448 (50%), Gaps = 11/448 (2%) Frame = +2 Query: 284 DDDNDGPVVFKRT-KTASKQNQLKSEINNLTSPKHDGSSQRHVPGAPSPNGQSSSSQKGN 460 DDD+DGP+VFKR + SKQNQ NL + K SSQ + NGQS ++ KG Sbjct: 17 DDDDDGPIVFKRGGNSTSKQNQ-----PNLEAKKPSSSSQ-------NSNGQSLNAHKGK 64 Query: 461 L-VSSANVSTGKSTV-------ANSKVPPAVAEXXXXXXXXXXXXXDMEKKPSVGRGADS 616 +SS+N S KS + +++K P E KP V D Sbjct: 65 SPISSSNASPVKSPIGSPKASASSAKASPMKPPVTYSRVPSSSIAVKEETKPIV----DD 120 Query: 617 EDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLEDDIPLS 796 +DS+DDKPLS R +D++PLS Sbjct: 121 DDSEDDKPLSSRFKGSTNNANKGVTVPARVKDEHSD-----------------DDEVPLS 163 Query: 797 SKFRVKSSGASMFKKSFDSDEEKPLASRFQQNGSS-KNNEMVKPKVLNKRPLSDINSSDQ 973 S+F KS+ S K+ S E+ L S+ Q NGS+ K+ + V KRP+ + S+Q Sbjct: 164 SRFAAKSNAGSSSCKTISSSEKILLVSKIQLNGSTAKDKQQKSSAVPTKRPMDNKVPSNQ 223 Query: 974 SSVKKPKLSYGSVPAKVKQVSVKAEPKTDDDDHVPIGQRMKKPAASDNXXXXXXXXXXXX 1153 S KKPKLS S KQV+VKAE K DDDDH+ I QRMKK ++S N Sbjct: 224 SFAKKPKLSDAST---TKQVTVKAELKADDDDHLTISQRMKKASSSSNKSLSVKQNVTKV 280 Query: 1154 XXXXXXXXXXXXXXXXXXXXXXXXXXXPPGSGEGQK-WSTLVHSGVIFPPPYKPHGVKML 1330 PGS +GQK W TLVH+GVIFPPPYKPHGVKML Sbjct: 281 VSFSSKKTTKNNKKQMQNSKYSKSTKVQPGSSDGQKKWKTLVHNGVIFPPPYKPHGVKML 340 Query: 1331 YNGQPVDLTPEQEEVATMFAVMKETDYATKPKFIENFMNDWRQILGKNHLIKKFELCDFT 1510 Y G+PVDLTPEQEEVATMFAVMK+T+Y KP+F++NF NDWR +LGKNH+I+K E CDF Sbjct: 341 YKGKPVDLTPEQEEVATMFAVMKDTEYVQKPQFLQNFWNDWRTLLGKNHVIQKLEACDFN 400 Query: 1511 PIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 PIY A++EEK Sbjct: 401 PIYEWHQKEKEKKKQMSTEEKKAVREEK 428 >ref|XP_006857525.1| hypothetical protein AMTR_s00061p00026580, partial [Amborella trichopoda] gi|548861621|gb|ERN18992.1| hypothetical protein AMTR_s00061p00026580, partial [Amborella trichopoda] Length = 595 Score = 274 bits (700), Expect = 9e-71 Identities = 194/480 (40%), Positives = 239/480 (49%), Gaps = 28/480 (5%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTASKQNQL-----KSEINN---LTSP-KHDG 391 MA D +K + + +DD+D P+VFKR T +K Q KS N L P DG Sbjct: 1 MAGDNSLKQEEFENSEDDDDVPLVFKRHSTPTKLKQSVAVPKKSPQGNSKPLGRPISADG 60 Query: 392 SSQRHVPGAPSPNGQSSSSQKGNLVSSANVSTGKSTVANSK-VPPAVAEXXXXXXXXXXX 568 S+ ++V S + S+ + N + S+ V KS + S + + Sbjct: 61 SAPKNVSLVKSSH---SNVRSNNALPSSKVLPEKSALVRSTTLTTKSGQSRDMSTGINDK 117 Query: 569 XXDMEKKPSVGRGADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 748 ++PS +S+DSDDDKPL+ R+ Sbjct: 118 DSQPLQRPSAEANVESDDSDDDKPLNSRVAAVAKTVRNNSSGPNLPLPSSAMVLKMSVKS 177 Query: 749 XXXXXX---EDLEDDIPLSSKFRVKSSGASMFKKSF-----DSDEEKPLASRFQQNGSSK 904 +D +D+ PLS KF KSS ++ S DSDEEKPL S+FQQNGSSK Sbjct: 178 PVNVVKRSPDDSDDEKPLSQKFPQKSSSGAVAGTSIKPAYDDSDEEKPLVSKFQQNGSSK 237 Query: 905 NN-----EMVKPKVLNKRPLSDINSSDQSSVKKPKLSYGSVPA-KVK-QVSVKAEP--KT 1057 N + +L KR + Q KKPK S P+ KVK +V VKAE K Sbjct: 238 KNLNGELSLKANHILKKR----LAGEPQMLAKKPKPSTDPSPSSKVKIEVDVKAETSEKG 293 Query: 1058 DDDDHVPIGQRMKKPAA-SDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1234 DD+D +PI QRMKK A+ S Sbjct: 294 DDEDDLPISQRMKKSASVSGQASAKKISVKTKVVSSSFKKTGKNTKKEIKKLKQSKSAKG 353 Query: 1235 PPGSGEGQKWSTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYA 1414 PPGSG+GQKW+TL H+GVIFPPPYKPHGVKMLYNG PVDLTPEQEEVATMFAVMK+T+YA Sbjct: 354 PPGSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYNGLPVDLTPEQEEVATMFAVMKDTEYA 413 Query: 1415 TKPKFIENFMNDWRQILGKNHLIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 TKPKF+ENFMNDWR ILGKNH+IKKFELCD TPIY ALKEEK Sbjct: 414 TKPKFVENFMNDWRVILGKNHIIKKFELCDLTPIYEWHLKEKEKKKHMSAEEKKALKEEK 473 >ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus] gi|449503189|ref|XP_004161878.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus] Length = 889 Score = 273 bits (699), Expect = 1e-70 Identities = 182/473 (38%), Positives = 237/473 (50%), Gaps = 21/473 (4%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTASKQNQLKSEINNLTSPKHDGSSQRHVPGA 418 MAV+ K D D+DN P+VFKRT +AS+QNQL SEI + + + R Sbjct: 1 MAVETFGKAPMFDDDDEDNM-PIVFKRT-SASRQNQLDSEIKHSQAQRLSKLPGRQGSDL 58 Query: 419 PSPNGQSSSSQKGNLVSSANVSTGKSTVANSKVP---PAVAEXXXXXXXXXXXXXDMEKK 589 S NGQSS++QK + S S +S + + K P M+ + Sbjct: 59 CSTNGQSSNNQK-RMTSLPKTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSR 117 Query: 590 P-------------SVGRGADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXXXXX 730 P S+ ++ DS+DDKPLSIRL Sbjct: 118 PKSLVNAVVKEENVSINPSQENSDSEDDKPLSIRLKGNPNQPNKGLVSTVPKNKVKKSLA 177 Query: 731 XXXXXXXXXXXXEDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQNGSSKNN 910 D +D++PLSSKF++K + + K DE+KPL + QNGS+ + Sbjct: 178 -------------DSDDEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTSRD 224 Query: 911 EMVKPKVLN-KRPL--SDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDDDDH-VP 1078 ++ KP VL+ KRPL D +S Q KKPKL+ S P K VS+KA+ + DDDD +P Sbjct: 225 KLQKPAVLSSKRPLPNEDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDIP 284 Query: 1079 IGQRMKKPAASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGSGEGQ 1258 I QRMKK +A+ N P +G+GQ Sbjct: 285 ISQRMKKVSATVNKSSSSKPTISKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQ 344 Query: 1259 K-WSTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATKPKFIE 1435 K W+TLVH+GVIFPPPY+ HGVKMLY G+PVDLTP QEEVATMFAVMK+TDY KPKF E Sbjct: 345 KKWTTLVHNGVIFPPPYQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYMLKPKFKE 404 Query: 1436 NFMNDWRQILGKNHLIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 NF NDWR++LGKNH+I+ + CDFTPIY A+KEEK Sbjct: 405 NFWNDWRKLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEK 457 >gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1| topoisomerase I [Nicotiana tabacum] Length = 852 Score = 269 bits (687), Expect = 3e-69 Identities = 183/472 (38%), Positives = 239/472 (50%), Gaps = 20/472 (4%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDG-PVVFKRTKTASKQNQLKSEINNLTSPKHDGSSQRHVPG 415 MAV+A K K + + DDD+D P+VFKR+ T SKQNQ +N +S K DG S R Sbjct: 1 MAVEAFSKTKLMAEVDDDDDDMPLVFKRSSTTSKQNQ-----SNSSSQKQDGRSGRQASD 55 Query: 416 APSPNGQSSSSQKGNLVSS--------------ANVSTGKSTVANSKVPPAVAEXXXXXX 553 SPNGQSSS++K +S A+ S+G+++ A + P A A Sbjct: 56 VRSPNGQSSSAEKVKAGTSSKASRAVSPFTSPKASPSSGRTSPAPNSRPSASAGNQAKDV 115 Query: 554 XXXXXXXDMEKKPSVGRGAD----SEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXX 721 E K +V ++ +EDS+DDKPLS RL Sbjct: 116 NQQSKIVPNEPKQAVEPKSEPNDEAEDSEDDKPLSARLSSGLSKSNSSHANKVLGTSASV 175 Query: 722 XXXXXXXXXXXXXXXEDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQNGSS 901 ED +D+IPL+S+F++KS+ + KS +S+E KP + +QNG Sbjct: 176 QKSRPPKK-------EDSDDEIPLASRFQLKSNAGASTSKSSNSEEVKP---KIRQNG-- 223 Query: 902 KNNEMVKPKVLNKRPLSDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKT-DDDDHVP 1078 + VL+KRP D++ + +K +V + SVK E KT DDDD VP Sbjct: 224 ----LPSTTVLSKRPPGDVSLLLRLQLKSLGFLMHLHLFRVSEASVKPEKKTEDDDDDVP 279 Query: 1079 IGQRMKKPAASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGSGEGQ 1258 I QR+KK AS + P SGEGQ Sbjct: 280 ISQRIKKSVASASKLSSAKKATKVVSSSMKTKKKLKKSKYSKSSKLQ------PSSGEGQ 333 Query: 1259 KWSTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATKPKFIEN 1438 KW+TLVH+GVIFPPPYKPHGVKMLY G+PVDLTPEQEEVATM+AVM +TDY +K +F EN Sbjct: 334 KWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTDYMSKLQFKEN 393 Query: 1439 FMNDWRQILGKNHLIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 FMNDWR+ILGKNH+I+ + CDFTPIY L+EEK Sbjct: 394 FMNDWRKILGKNHVIQNLDDCDFTPIYERPSSEKEKKKQMSTKRKRPLREEK 445 >ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [Amborella trichopoda] gi|548860061|gb|ERN17669.1| hypothetical protein AMTR_s00059p00193620 [Amborella trichopoda] Length = 884 Score = 263 bits (673), Expect = 1e-67 Identities = 195/483 (40%), Positives = 240/483 (49%), Gaps = 31/483 (6%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTASKQNQL-----KSEINNLTSPKHDGSSQR 403 MA D +K + + + DDD++ P+VFKR T +K Q KS N S R Sbjct: 1 MAGDNSLKQEEIENSDDDDEFPLVFKRYSTPAKPKQSVAVPKKSSQGNSEPLGRPSSVDR 60 Query: 404 HVPGAPS------PNGQSSS---SQKGNLVSSANVSTGKSTVANSKVPPAVAEXXXXXXX 556 P S PN Q + S K L SSA +ST KS + + P + + Sbjct: 61 GAPKNISLVKPSHPNVQRDNTLPSLKSALFSSA-ISTAKSGESRD-MNPGINDKDSQPL- 117 Query: 557 XXXXXXDMEKKPSVGRGADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXXXXXXX 736 ++PS SEDSDDDKPL+ R+ Sbjct: 118 ---------QRPSSEPNMKSEDSDDDKPLNSRVAAVANTVKNKSPGPNLPLSCSAMPVKT 168 Query: 737 XXXXXXXXXX---EDLEDDIPLSSKFRVKSSGASMFKKSF-----DSDEEKPLASRFQQN 892 +D +D+ PLS KF KSS ++ S DSDEEKPLAS FQ+N Sbjct: 169 IVKSPVNVVKRSPDDSDDEKPLSQKFPRKSSNGAVAGTSIKPTYDDSDEEKPLASNFQRN 228 Query: 893 GSSKNN-----EMVKPKVLNKRPLSDINSSDQSSVKKPKLSYG-SVPAKVK-QVSVKAEP 1051 GSSK N + ++L KRP + + KKPK S S ++VK +V+VKAE Sbjct: 229 GSSKKNLNGELPLKVNQILKKRPAEE----SKVLAKKPKPSADPSSSSRVKVEVTVKAEK 284 Query: 1052 --KTDDDDHVPIGQRMKKPAASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1225 + DD+D + I QRMKK +S + Sbjct: 285 SERGDDEDDLSISQRMKK-FSSVSGQASAKKIKTKVVSSSFKKTGKNSKKEMKKIKGSKS 343 Query: 1226 XXXPPGSGEGQKWSTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKET 1405 PPGSG+GQKWSTL H+GVIFP PYKPHGVKMLYNGQPVDLTPE+EEVATMFAVMK+T Sbjct: 344 AKGPPGSGDGQKWSTLEHNGVIFPSPYKPHGVKMLYNGQPVDLTPEKEEVATMFAVMKDT 403 Query: 1406 DYATKPKFIENFMNDWRQILGKNHLIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALK 1585 +Y TKPKFI+NFMNDWR ILGKNH+IKKFELCDFTPIY ALK Sbjct: 404 EYETKPKFIDNFMNDWRVILGKNHVIKKFELCDFTPIYEWHLKEKEKKKQMSAEEKKALK 463 Query: 1586 EEK 1594 EEK Sbjct: 464 EEK 466 >ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum tuberosum] Length = 905 Score = 263 bits (672), Expect = 2e-67 Identities = 181/495 (36%), Positives = 232/495 (46%), Gaps = 43/495 (8%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTASKQNQLKSEINNLTSPKHDGSSQRHVPGA 418 MAV+A K + D DDD+D P+VFKR+ T SKQNQ +N +S K DG S R VP Sbjct: 1 MAVEAFAKTNLMEDIDDDDDMPLVFKRSSTTSKQNQ-----SNSSSQKQDGRSGRQVPDV 55 Query: 419 PSPNGQSSSSQKGNLVSSANVSTGKSTVA-----------------------NSKVPPAV 529 SPNGQSSS+ K +S+ S S + NS+ PPA Sbjct: 56 RSPNGQSSSTHKVKTAASSKASPAVSPLTSPKAAPLSSRTSPAPNFRTSPAPNSRTPPAP 115 Query: 530 -------------------AEXXXXXXXXXXXXXDMEKKPSVGRGADSEDSDDDKPLSIR 652 A+ +P ++EDS+DDKPLS R Sbjct: 116 NSRTSPAPNSRPSSSAGNQAKNVNQQSNIAPKESKQAIEPKSEPNDEAEDSEDDKPLSAR 175 Query: 653 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLEDDIPLSSKFRVKSSGASM 832 + ED +D+IPL+S+F++KSS + Sbjct: 176 VPSGLSKSNSIHANNVLGTSTSVQKSRPPKK-------EDSDDEIPLASRFQMKSSAGAS 228 Query: 833 FKKSFDSDEEKPLASRFQQNGSSKNNEMVKPKVLNKRPLSDINSSDQSSVKKPKLSYGSV 1012 K S+E KP + +QNG + VL+KRP +++ + +K Sbjct: 229 TSKFSSSEEVKP---KIRQNG------LPSATVLSKRPPGEVSLLLRLQLKSLDFLMHLH 279 Query: 1013 PAKVKQVSVKAEPKT-DDDDHVPIGQRMKKPAASDNXXXXXXXXXXXXXXXXXXXXXXXX 1189 V SVK E KT DDDD VP+ QR+KK AS + Sbjct: 280 LFLVSNXSVKTEKKTEDDDDEVPLSQRIKKAVASASASASKVSSVKKATKVVSSSMKKTK 339 Query: 1190 XXXXXXXXXXXXXXXPPGSGEGQKWSTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQE 1369 P SG+GQKW+TL H+GVIFPPPYKPHGVKMLY G+PVDLTPEQE Sbjct: 340 KKLKKPKYSKSSKLQP-SSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQE 398 Query: 1370 EVATMFAVMKETDYATKPKFIENFMNDWRQILGKNHLIKKFELCDFTPIYXXXXXXXXXX 1549 EVATM+AVM +T+Y TK +F ENFMNDWR+ILGKNH+I+K E C+FTPIY Sbjct: 399 EVATMYAVMLDTEYLTKQQFKENFMNDWRKILGKNHVIQKLEECNFTPIYEWHQSEKEKK 458 Query: 1550 XXXXXXXXXALKEEK 1594 AL+EEK Sbjct: 459 KQMSSEEKKALREEK 473 >ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera] gi|296082698|emb|CBI21703.3| unnamed protein product [Vitis vinifera] Length = 857 Score = 261 bits (667), Expect = 6e-67 Identities = 184/470 (39%), Positives = 224/470 (47%), Gaps = 18/470 (3%) Frame = +2 Query: 239 MAVDACIKPKFLG---DCDDDNDGPVVFKRTKTAS-KQNQLKSEINNLTSPKHD----GS 394 MAV+AC+ PK D DDD++ P+VFKR+ +S N + +I +++ K + Sbjct: 1 MAVEACVNPKMFNNEVDDDDDDERPLVFKRSSNSSASNNNSRLKIQSISGSKRPDDAHSN 60 Query: 395 SQRHVPGAPSPNGQSSSSQKGNLVSSANVSTGKSTVA-NSKVPPAVAEXXXXXXXXXXXX 571 Q+ G P S + V S G+ V NSKV Sbjct: 61 GQKKDKGMAPPMPAKGSGRVTGSVKSPPQQVGRGVVVGNSKVEA---------------- 104 Query: 572 XDMEKKPSVGRGADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 751 KK + DS+DDKPLS+RL Sbjct: 105 --QNKKAEL-----DSDSEDDKPLSVRLSSGLPKGKGSSNNVGLGRGGVGGVKKEED--- 154 Query: 752 XXXXXEDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQNGSSKNNEMVKPKV 931 +D +D IPLSSKF++KS DE+KPL + QNG + + P V Sbjct: 155 -----DDDDDKIPLSSKFQLKS------------DEKKPLPLKVNQNGGTDKRDK-SPTV 196 Query: 932 LNK-RPLSDINSS--DQSSVKKPKLSYGSV-PAKVKQVSVKAEPKT--DDDDHVPIGQRM 1093 LNK RPL +NSS S VKKPK+S S P KV + KAEPK DDDD +PI QRM Sbjct: 197 LNKKRPLDGVNSSLGQSSLVKKPKISGQSAQPFKVTHATAKAEPKVEDDDDDDMPISQRM 256 Query: 1094 KKPAASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PPGSGEGQKW 1264 KK AS PP SGEGQKW Sbjct: 257 KKSGASSGNKPVPAKQKVTKVVSSTSFKKTKDIKSKKMEKNSKYSKSTKVPPSSGEGQKW 316 Query: 1265 STLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATKPKFIENFM 1444 +TLVH+GVIFPPPYKPHGVKMLY G+PVDLTPEQEEVATMFAVM +TDY K KF ENFM Sbjct: 317 TTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMQKEKFKENFM 376 Query: 1445 NDWRQILGKNHLIKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 DWR+ILGKNH+I++ + CDFTPIY LKEEK Sbjct: 377 ADWRKILGKNHVIQRLDDCDFTPIYEWHQEEKEKKKQMSTEEKKTLKEEK 426 >gb|EPS68250.1| hypothetical protein M569_06521 [Genlisea aurea] Length = 614 Score = 253 bits (647), Expect = 1e-64 Identities = 170/454 (37%), Positives = 218/454 (48%), Gaps = 2/454 (0%) Frame = +2 Query: 239 MAVDACIKPKFLGDCDDDNDGPVVFKRTKTAS-KQNQLKSEINNLTSPKHDGSSQRHVPG 415 MAVD+C + K + + D+D+ P++FKR+ +S KQN LK E PK + + V Sbjct: 1 MAVDSCDETKSMDNSDEDDGAPIIFKRSANSSAKQNSLKQEAKRPLPPKPSIQNSKAVSS 60 Query: 416 APSPNGQSSSSQKGNLVSSANVSTGKSTVANSKVPPAVAEXXXXXXXXXXXXXDMEKKPS 595 + +PN S V S++V+ S+ + D + KP Sbjct: 61 SKTPNIARVRSGDLPTVKSSSVTCKPSSEKQQ------IKREKQIDEPSKNSGDSDDKPV 114 Query: 596 VGRGADSEDSDDDKPLSIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDL 775 VG + + DK ED Sbjct: 115 VGSSSSFSPVNADK--------------------------GNNASTSGHTLKTTPKSEDS 148 Query: 776 EDDIPLSSKFRVKSSGASMF-KKSFDSDEEKPLASRFQQNGSSKNNEMVKPKVLNKRPLS 952 +D+ PLS +F GA + K S S E K + QNGS+ +++ KP + +K+ Sbjct: 149 DDEKPLSQRFGRGKLGAVVSPKNSHSSAENKSSLGKVVQNGSTVSDK--KPSIASKKRPG 206 Query: 953 DINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDDDDHVPIGQRMKKPAASDNXXXXX 1132 D SD+S +KKPK S G+V + +K E + DDDDHVPI QR+KK A+S+ Sbjct: 207 DDLKSDESRIKKPKHS-GTVEISAAKPQLKEEEE-DDDDHVPISQRIKKTASSEKKKTPI 264 Query: 1133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGSGEGQKWSTLVHSGVIFPPPYKP 1312 PPGSGEGQKW+TLVHSGVIFPPPYKP Sbjct: 265 QKSTKSPSASLRNVNKKSTKIVKKSEYSKSSKV-PPGSGEGQKWTTLVHSGVIFPPPYKP 323 Query: 1313 HGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATKPKFIENFMNDWRQILGKNHLIKKF 1492 HG+KMLY G+PVDLTPEQEEVATMFAVM ETDY KP+F ENFMNDWR ILGKNH I+ Sbjct: 324 HGIKMLYKGKPVDLTPEQEEVATMFAVMLETDYMNKPQFKENFMNDWRVILGKNHTIQSL 383 Query: 1493 ELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 E CDFTPIY ALKEEK Sbjct: 384 EHCDFTPIYNWHLQEKEKKKQMTTEEKKALKEEK 417 >ref|XP_007020667.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao] gi|508720295|gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao] Length = 733 Score = 252 bits (643), Expect = 4e-64 Identities = 137/278 (49%), Positives = 164/278 (58%), Gaps = 2/278 (0%) Frame = +2 Query: 767 EDLEDDIPLSSKFRVKSSGASMFKKSFDSDEEKPLASRFQQNGSSKNNEMVKPKVLN-KR 943 ED +D+ PLS++F VKS+ + + D DE+KPLAS+ QQNGS + L+ KR Sbjct: 68 EDPDDEAPLSARFNVKSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGKQQNSSTLSGKR 127 Query: 944 PLSDINSSDQSSVKKPKLSYGSVPAKVKQVSVKAEPKTDDDDHVPIGQRMKKPAASDNXX 1123 PL NSSD SS KKPK S K KQV+VKAE +DDDH+PI QRMKK AS++ Sbjct: 128 PLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTASNSKL 187 Query: 1124 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGSGEGQK-WSTLVHSGVIFPP 1300 PP SG+GQK WSTLVH+GVIFP Sbjct: 188 SSMKQKTTKVVSSSFKKINKKSKKEMKSSKYIKSTKVPPSSGDGQKKWSTLVHNGVIFPS 247 Query: 1301 PYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKETDYATKPKFIENFMNDWRQILGKNHL 1480 PY PHGVKMLY+G+PVDLTPEQEEVATMFAVMK+TDY +K +F +NF DW ++LGKNH Sbjct: 248 PYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMSKTQFKKNFWEDWSKLLGKNHT 307 Query: 1481 IKKFELCDFTPIYXXXXXXXXXXXXXXXXXXXALKEEK 1594 IK + CDFTPIY ALKEEK Sbjct: 308 IKDLDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEK 345