BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00012271
         (929 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858514.1| hypothetical protein AMTR_s00071p00142490 [A...    67   1e-08
ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts...    65   4e-08
ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati...    61   6e-07
ref|XP_007039605.1| Regulator of nonsense transcripts 1 [Theobro...    59   3e-06
ref|XP_006368472.1| RNA helicase family protein [Populus trichoc...    59   4e-06
gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]       59   4e-06

>ref|XP_006858514.1| hypothetical protein AMTR_s00071p00142490 [Amborella trichopoda]
            gi|548862623|gb|ERN19981.1| hypothetical protein
            AMTR_s00071p00142490 [Amborella trichopoda]
          Length = 1252

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 31/47 (65%), Positives = 33/47 (70%)
 Frame = +1

Query: 1    LFTQVGFXXXXXXXXXXXXFGVVGPNPLQSQGLMNPLYSQPFTQYNT 141
            LFTQVGF            FG+ GP PLQSQG+MNPLYSQPFTQYNT
Sbjct: 1182 LFTQVGFNDPSQDDSSQTHFGMAGPGPLQSQGVMNPLYSQPFTQYNT 1228


>ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
            vinifera] gi|297742168|emb|CBI33955.3| unnamed protein
            product [Vitis vinifera]
          Length = 1267

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 31/47 (65%), Positives = 31/47 (65%)
 Frame = +1

Query: 1    LFTQVGFXXXXXXXXXXXXFGVVGPNPLQSQGLMNPLYSQPFTQYNT 141
            LFTQVGF            FGV  PNPLQSQGLMNPLYSQPF  YNT
Sbjct: 1186 LFTQVGFNDPSQDDASQSHFGVANPNPLQSQGLMNPLYSQPFAHYNT 1232


>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
            gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
            protein, putative [Ricinus communis]
          Length = 1280

 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 28/47 (59%), Positives = 30/47 (63%)
 Frame = +1

Query: 1    LFTQVGFXXXXXXXXXXXXFGVVGPNPLQSQGLMNPLYSQPFTQYNT 141
            LFTQ+GF            FG+  PNPLQSQGLMN LYSQPF  YNT
Sbjct: 1208 LFTQIGFNDASQDDVSQNHFGIANPNPLQSQGLMNSLYSQPFAHYNT 1254


>ref|XP_007039605.1| Regulator of nonsense transcripts 1 [Theobroma cacao]
            gi|508776850|gb|EOY24106.1| Regulator of nonsense
            transcripts 1 [Theobroma cacao]
          Length = 1266

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 29/47 (61%), Positives = 29/47 (61%)
 Frame = +1

Query: 1    LFTQVGFXXXXXXXXXXXXFGVVGPNPLQSQGLMNPLYSQPFTQYNT 141
            LFTQVGF            FGV  PN LQSQGLMN LYSQPF  YNT
Sbjct: 1192 LFTQVGFNDPSQDDASQSHFGVANPNQLQSQGLMNSLYSQPFAHYNT 1238


>ref|XP_006368472.1| RNA helicase family protein [Populus trichocarpa]
            gi|550346386|gb|ERP65041.1| RNA helicase family protein
            [Populus trichocarpa]
          Length = 1256

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 28/47 (59%), Positives = 29/47 (61%)
 Frame = +1

Query: 1    LFTQVGFXXXXXXXXXXXXFGVVGPNPLQSQGLMNPLYSQPFTQYNT 141
            LFTQVGF            FG+  PN LQSQGLMN LYSQPF  YNT
Sbjct: 1183 LFTQVGFNDPSQDDASQSHFGIANPNQLQSQGLMNSLYSQPFAHYNT 1229


>gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 582

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 28/47 (59%), Positives = 29/47 (61%)
 Frame = +1

Query: 1   LFTQVGFXXXXXXXXXXXXFGVVGPNPLQSQGLMNPLYSQPFTQYNT 141
           LFTQVGF            FG+  PN LQSQGLMN LYSQPF  YNT
Sbjct: 509 LFTQVGFNDPSQDDASQSHFGITNPNQLQSQGLMNSLYSQPFAHYNT 555