BLASTX nr result
ID: Sinomenium21_contig00011646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00011646
(536 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 94 3e-17
ref|XP_007034655.1| RING-H2 group F1A, putative isoform 3 [Theob... 84 3e-14
ref|XP_007034654.1| RING-H2 group F1A, putative isoform 2 [Theob... 84 3e-14
ref|XP_007034653.1| RING-H2 group F1A, putative isoform 1 [Theob... 84 3e-14
ref|XP_002312516.2| hypothetical protein POPTR_0008s14860g [Popu... 81 2e-13
ref|XP_006378404.1| hypothetical protein POPTR_0010s10240g [Popu... 80 4e-13
ref|XP_002314719.2| zinc finger family protein [Populus trichoca... 80 4e-13
ref|XP_004296921.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 76 4e-12
ref|XP_007224756.1| hypothetical protein PRUPE_ppa024137mg, part... 74 2e-11
ref|XP_002517194.1| protein binding protein, putative [Ricinus c... 74 2e-11
gb|EXB55010.1| E3 ubiquitin-protein ligase RHF1A [Morus notabilis] 74 3e-11
ref|XP_006489325.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 74 3e-11
ref|XP_006349224.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 74 3e-11
ref|XP_006419852.1| hypothetical protein CICLE_v10005221mg [Citr... 74 3e-11
gb|ABR18468.1| unknown [Picea sitchensis] 73 5e-11
ref|XP_004229421.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 72 6e-11
gb|AFK43681.1| unknown [Lotus japonicus] 72 8e-11
ref|XP_007147747.1| hypothetical protein PHAVU_006G151600g [Phas... 71 2e-10
ref|XP_004486133.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 70 4e-10
ref|XP_002870329.1| hypothetical protein ARALYDRAFT_493488 [Arab... 69 7e-10
>ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Vitis vinifera]
gi|297737001|emb|CBI26202.3| unnamed protein product
[Vitis vinifera]
Length = 391
Score = 93.6 bits (231), Expect = 3e-17
Identities = 63/123 (51%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVTAGVA---RMMERLDPXXXXXXXXX 271
RYKESISKGTRGFKEKLLSRNNSVKELSK VQRE++AG+A RM+ERLDP
Sbjct: 270 RYKESISKGTRGFKEKLLSRNNSVKELSKGVQREMSAGIASVTRMIERLDPILKRTGASN 329
Query: 270 XXXXXXXXXSCISHDGKDVQGSLLQFPSRILADASRGTHPNSPIHISGILSSVPDRVEVT 91
S +SH GK VQ +++ PS + S + P++ S +S DRVEV
Sbjct: 330 PDSSFTGGTSNVSHKGKGVQENVIT-PSGNNGEISNDSSPDASPLASVTIS---DRVEVF 385
Query: 90 RLQ 82
LQ
Sbjct: 386 PLQ 388
>ref|XP_007034655.1| RING-H2 group F1A, putative isoform 3 [Theobroma cacao]
gi|508713684|gb|EOY05581.1| RING-H2 group F1A, putative
isoform 3 [Theobroma cacao]
Length = 432
Score = 83.6 bits (205), Expect = 3e-14
Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLDPXXXXXXXXX 271
RYKESISKGTRG KEKLL+RNNSVKELSK VQRE++ AGVA+M+ERLD
Sbjct: 309 RYKESISKGTRGLKEKLLARNNSVKELSKGVQREMSAGIAGVAKMIERLDIATKRPGASI 368
Query: 270 XXXXXXXXXSCISHDGKDVQGSLL-QFPSRILADASRGTHPNSPIHISGILSSVPDRVEV 94
S I GK VQ +++ Q ++ A+ + G + P + S ++P +VEV
Sbjct: 369 PVSGGTGGTSNILFKGKGVQENVIAQGLNKNCAEFNHGLNSEEPSYSS---CTIPGKVEV 425
Query: 93 TRLQ 82
+R Q
Sbjct: 426 SRTQ 429
>ref|XP_007034654.1| RING-H2 group F1A, putative isoform 2 [Theobroma cacao]
gi|508713683|gb|EOY05580.1| RING-H2 group F1A, putative
isoform 2 [Theobroma cacao]
Length = 364
Score = 83.6 bits (205), Expect = 3e-14
Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLDPXXXXXXXXX 271
RYKESISKGTRG KEKLL+RNNSVKELSK VQRE++ AGVA+M+ERLD
Sbjct: 241 RYKESISKGTRGLKEKLLARNNSVKELSKGVQREMSAGIAGVAKMIERLDIATKRPGASI 300
Query: 270 XXXXXXXXXSCISHDGKDVQGSLL-QFPSRILADASRGTHPNSPIHISGILSSVPDRVEV 94
S I GK VQ +++ Q ++ A+ + G + P + S ++P +VEV
Sbjct: 301 PVSGGTGGTSNILFKGKGVQENVIAQGLNKNCAEFNHGLNSEEPSYSS---CTIPGKVEV 357
Query: 93 TRLQ 82
+R Q
Sbjct: 358 SRTQ 361
>ref|XP_007034653.1| RING-H2 group F1A, putative isoform 1 [Theobroma cacao]
gi|508713682|gb|EOY05579.1| RING-H2 group F1A, putative
isoform 1 [Theobroma cacao]
Length = 407
Score = 83.6 bits (205), Expect = 3e-14
Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLDPXXXXXXXXX 271
RYKESISKGTRG KEKLL+RNNSVKELSK VQRE++ AGVA+M+ERLD
Sbjct: 284 RYKESISKGTRGLKEKLLARNNSVKELSKGVQREMSAGIAGVAKMIERLDIATKRPGASI 343
Query: 270 XXXXXXXXXSCISHDGKDVQGSLL-QFPSRILADASRGTHPNSPIHISGILSSVPDRVEV 94
S I GK VQ +++ Q ++ A+ + G + P + S ++P +VEV
Sbjct: 344 PVSGGTGGTSNILFKGKGVQENVIAQGLNKNCAEFNHGLNSEEPSYSS---CTIPGKVEV 400
Query: 93 TRLQ 82
+R Q
Sbjct: 401 SRTQ 404
>ref|XP_002312516.2| hypothetical protein POPTR_0008s14860g [Populus trichocarpa]
gi|550333097|gb|EEE89883.2| hypothetical protein
POPTR_0008s14860g [Populus trichocarpa]
Length = 385
Score = 80.9 bits (198), Expect = 2e-13
Identities = 57/124 (45%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLDPXXXXXXXXX 271
RYKES+SKGTRG KEKLL+RNNSVKELSKEVQRE++ AGVARM+ERLD
Sbjct: 258 RYKESLSKGTRGMKEKLLARNNSVKELSKEVQREMSAGIAGVARMIERLDLTSKRAGPSM 317
Query: 270 XXXXXXXXXSCISHDGKDVQGSLLQFPSRILADASRG-THPNSPIHISGILSSVPDRVEV 94
S S GK V+ +++ ++ LA S H S S ++VP +VE+
Sbjct: 318 SDSDFTRGTSNFSWKGKGVEQNII---AQALAKQSEEIAHDTSLGASSHASATVPAQVEI 374
Query: 93 TRLQ 82
+ Q
Sbjct: 375 SHAQ 378
>ref|XP_006378404.1| hypothetical protein POPTR_0010s10240g [Populus trichocarpa]
gi|550329497|gb|ERP56201.1| hypothetical protein
POPTR_0010s10240g [Populus trichocarpa]
Length = 405
Score = 79.7 bits (195), Expect = 4e-13
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLDPXXXXXXXXX 271
RYK+S+SK TRG KEKL++RNNSVKELSKEVQRE++ AGVARM+ERLD
Sbjct: 282 RYKDSLSKSTRGIKEKLVARNNSVKELSKEVQREMSAGIAGVARMIERLDLTTKRTGPSM 341
Query: 270 XXXXXXXXXSCISHDGKDVQGSLL-QFPSRILADASRGTHPNSPIHISGILSSVPDRVEV 94
S S GK V+ +++ Q ++ + R T + H SG +V RVE+
Sbjct: 342 SDSGFTGGTSNFSWKGKGVEQNIIAQALAKTSEEIDRDTSLGASSHASG---TVQARVEI 398
Query: 93 TRLQ 82
+ +Q
Sbjct: 399 SHVQ 402
>ref|XP_002314719.2| zinc finger family protein [Populus trichocarpa]
gi|550329496|gb|EEF00890.2| zinc finger family protein
[Populus trichocarpa]
Length = 418
Score = 79.7 bits (195), Expect = 4e-13
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLDPXXXXXXXXX 271
RYK+S+SK TRG KEKL++RNNSVKELSKEVQRE++ AGVARM+ERLD
Sbjct: 282 RYKDSLSKSTRGIKEKLVARNNSVKELSKEVQREMSAGIAGVARMIERLDLTTKRTGPSM 341
Query: 270 XXXXXXXXXSCISHDGKDVQGSLL-QFPSRILADASRGTHPNSPIHISGILSSVPDRVEV 94
S S GK V+ +++ Q ++ + R T + H SG +V RVE+
Sbjct: 342 SDSGFTGGTSNFSWKGKGVEQNIIAQALAKTSEEIDRDTSLGASSHASG---TVQARVEI 398
Query: 93 TRLQ 82
+ +Q
Sbjct: 399 SHVQ 402
>ref|XP_004296921.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Fragaria vesca
subsp. vesca]
Length = 381
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/50 (82%), Positives = 43/50 (86%), Gaps = 3/50 (6%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLD 301
RYKESISKGTRG KEKL +RNNSVKELSK VQRE+T AGVARM ERLD
Sbjct: 272 RYKESISKGTRGLKEKLFARNNSVKELSKGVQREMTAGIAGVARMFERLD 321
>ref|XP_007224756.1| hypothetical protein PRUPE_ppa024137mg, partial [Prunus persica]
gi|462421692|gb|EMJ25955.1| hypothetical protein
PRUPE_ppa024137mg, partial [Prunus persica]
Length = 363
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/50 (78%), Positives = 44/50 (88%), Gaps = 3/50 (6%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLD 301
RYKESIS+ TRGFKEKL++RNNSVKELSK VQRE++ AGVARM ERLD
Sbjct: 240 RYKESISRSTRGFKEKLVARNNSVKELSKGVQREMSAGIAGVARMFERLD 289
>ref|XP_002517194.1| protein binding protein, putative [Ricinus communis]
gi|223543829|gb|EEF45357.1| protein binding protein,
putative [Ricinus communis]
Length = 414
Score = 73.9 bits (180), Expect = 2e-11
Identities = 53/120 (44%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLDPXXXXXXXXX 271
RYKESISK T+G KEKLL+RNNSVKELS+ VQRE++ AGVARM ERLD
Sbjct: 275 RYKESISKSTQGIKEKLLARNNSVKELSRGVQREMSAGIAGVARMFERLDLTPKRTGASS 334
Query: 270 XXXXXXXXXSCISHDGKDVQ-GSLLQFPSRILADASRGTHPNSPIHISGILSSVPDRVEV 94
S +S GK +Q ++LQ ++ + + P+H+S +V RVEV
Sbjct: 335 PVSGCREGTSELSLKGKGMQENTILQALNKKSEEVPCAASMDVPLHVS---YNVQGRVEV 391
>gb|EXB55010.1| E3 ubiquitin-protein ligase RHF1A [Morus notabilis]
Length = 424
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/50 (78%), Positives = 44/50 (88%), Gaps = 3/50 (6%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLD 301
RYKESISKGTRG KEKLL+RNNSVKELS+ VQRE++ AGVARM+ER D
Sbjct: 274 RYKESISKGTRGLKEKLLARNNSVKELSQGVQREMSAGIAGVARMIERFD 323
>ref|XP_006489325.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Citrus sinensis]
Length = 367
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/50 (78%), Positives = 44/50 (88%), Gaps = 3/50 (6%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLD 301
RYKESISKGTR KE+LLSRN SVKELSKEVQRE++ AGVA+M+ERLD
Sbjct: 249 RYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 298
>ref|XP_006349224.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Solanum
tuberosum]
Length = 366
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/50 (74%), Positives = 44/50 (88%), Gaps = 3/50 (6%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVTAGVA---RMMERLD 301
RYK+SISKGTRGFKEKLL+RN +VKE KEVQRE++AG+A RM+ERLD
Sbjct: 242 RYKDSISKGTRGFKEKLLARNTTVKEFGKEVQREMSAGIAGVSRMIERLD 291
>ref|XP_006419852.1| hypothetical protein CICLE_v10005221mg [Citrus clementina]
gi|557521725|gb|ESR33092.1| hypothetical protein
CICLE_v10005221mg [Citrus clementina]
Length = 367
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/50 (78%), Positives = 44/50 (88%), Gaps = 3/50 (6%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLD 301
RYKESISKGTR KE+LLSRN SVKELSKEVQRE++ AGVA+M+ERLD
Sbjct: 249 RYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 298
>gb|ABR18468.1| unknown [Picea sitchensis]
Length = 423
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/51 (72%), Positives = 43/51 (84%), Gaps = 3/51 (5%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLDP 298
RYKESIS+ TRGFKEK +RNN+V EL +EVQREV+ AGVAR+MERLDP
Sbjct: 282 RYKESISRSTRGFKEKFFARNNAVTELGREVQREVSAGIAGVARIMERLDP 332
>ref|XP_004229421.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Solanum
lycopersicum]
Length = 369
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/50 (72%), Positives = 44/50 (88%), Gaps = 3/50 (6%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVTAGVA---RMMERLD 301
RYK+SISKGTRGFKEKLL+RN +VKE +EVQRE++AG+A RM+ERLD
Sbjct: 241 RYKDSISKGTRGFKEKLLARNTTVKEFGREVQREMSAGIAGVSRMIERLD 290
>gb|AFK43681.1| unknown [Lotus japonicus]
Length = 365
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/50 (78%), Positives = 43/50 (86%), Gaps = 3/50 (6%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLD 301
+YKESISKGTRG KEKLL+RN SVKELSK VQRE+ AGVARM+ERLD
Sbjct: 242 KYKESISKGTRGLKEKLLARNASVKELSKGVQREMNAGIAGVARMIERLD 291
>ref|XP_007147747.1| hypothetical protein PHAVU_006G151600g [Phaseolus vulgaris]
gi|561020970|gb|ESW19741.1| hypothetical protein
PHAVU_006G151600g [Phaseolus vulgaris]
Length = 360
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/50 (78%), Positives = 42/50 (84%), Gaps = 3/50 (6%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLD 301
RYKESISKGTRG KEKLL+ N SVKELSK VQRE+ AGVARM+ERLD
Sbjct: 234 RYKESISKGTRGLKEKLLAHNVSVKELSKGVQREMNAGIAGVARMIERLD 283
>ref|XP_004486133.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Cicer arietinum]
Length = 389
Score = 69.7 bits (169), Expect = 4e-10
Identities = 50/120 (41%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVTAGVA---RMMERLDPXXXXXXXXX 271
RYKESISK TRG KEKLL+RN +VKELSK VQRE+ AG+A RM+ERLD
Sbjct: 262 RYKESISKSTRGLKEKLLARNVTVKELSKGVQREMNAGIAGVSRMIERLD--LASKRSNS 319
Query: 270 XXXXXXXXXSCISHDGKDV-QGSLLQFPSRILADASRGTHPNSPIHISGILSSVPDRVEV 94
+ DGK V + + P+ A ++P+H+S S+V R+E+
Sbjct: 320 PLIPVRNGGTSSFPDGKSVGERGIGHSPNEASGGAVHNFSSDAPLHVS---STVAGRMEI 376
>ref|XP_002870329.1| hypothetical protein ARALYDRAFT_493488 [Arabidopsis lyrata subsp.
lyrata] gi|297316165|gb|EFH46588.1| hypothetical protein
ARALYDRAFT_493488 [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 68.9 bits (167), Expect = 7e-10
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 3/50 (6%)
Frame = -3
Query: 441 RYKESISKGTRGFKEKLLSRNNSVKELSKEVQREVT---AGVARMMERLD 301
+YKESISK +G KEKLL+RNNSVKELSK VQRE+ AGVARM+ERLD
Sbjct: 261 KYKESISKSKQGLKEKLLARNNSVKELSKGVQREMNAGIAGVARMIERLD 310