BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00011638
         (1940 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27412.3| unnamed protein product [Vitis vinifera]              767   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   767   0.0  
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob...   759   0.0  
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun...   758   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   751   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   749   0.0  
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/...   749   0.0  
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   746   0.0  
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...   745   0.0  
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   744   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   744   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         744   0.0  
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]      744   0.0  
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   740   0.0  
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...   740   0.0  
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   740   0.0  
gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus...   740   0.0  
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   739   0.0  
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   739   0.0  
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...   738   0.0  

>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  767 bits (1981), Expect = 0.0
 Identities = 376/406 (92%), Positives = 392/406 (96%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLGKSGLRWLKIH+AN+YAGGVDKLSY+GRVAFTENHL+DIFDSA
Sbjct: 405  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSA 464

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEGRRWWL AEDPFQCLA CINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG
Sbjct: 465  DRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 524

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAG+KPADVYSGIAARVL+IMQR A+KDPATEPNAL+ARLLI+QVDRKL
Sbjct: 525  RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKL 584

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKER  IADE E+F ASC+AAK TLTALGEMFEAAR
Sbjct: 585  VKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAAR 644

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAKVIASEN PVRW TPL LPVVQPYRKLGRHLIKTSLQVL+LQRETDKVMV
Sbjct: 645  SIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMV 704

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTAVAC++AGLNFAGVHDSYWTHACDVDEMNRILREKFV
Sbjct: 705  KRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFV 764

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY  PILENLLEGFQ+SFPTL FPPLPERGDFDLREVL+SPYFFN
Sbjct: 765  ELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 810


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  767 bits (1981), Expect = 0.0
 Identities = 376/406 (92%), Positives = 392/406 (96%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLGKSGLRWLKIH+AN+YAGGVDKLSY+GRVAFTENHL+DIFDSA
Sbjct: 573  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSA 632

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEGRRWWL AEDPFQCLA CINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG
Sbjct: 633  DRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 692

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAG+KPADVYSGIAARVL+IMQR A+KDPATEPNAL+ARLLI+QVDRKL
Sbjct: 693  RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKL 752

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKER  IADE E+F ASC+AAK TLTALGEMFEAAR
Sbjct: 753  VKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAAR 812

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAKVIASEN PVRW TPL LPVVQPYRKLGRHLIKTSLQVL+LQRETDKVMV
Sbjct: 813  SIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMV 872

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTAVAC++AGLNFAGVHDSYWTHACDVDEMNRILREKFV
Sbjct: 873  KRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFV 932

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY  PILENLLEGFQ+SFPTL FPPLPERGDFDLREVL+SPYFFN
Sbjct: 933  ELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978


>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|590698457|ref|XP_007045722.1| DNA-directed RNA
            polymerase isoform 1 [Theobroma cacao]
            gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
            DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 996

 Score =  759 bits (1960), Expect = 0.0
 Identities = 368/406 (90%), Positives = 391/406 (96%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRG+LEFAEGRPLGKSGLRWLKIH+ANLYAGGVDKLSY+GR+AFTENHLDDIFDSA
Sbjct: 591  GSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSA 650

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEGRRWWL AEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG
Sbjct: 651  DRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 710

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAA+VNLVAG+KPADVYSGIAARV++IM+R AEKDPA  P+AL ARLLINQVDRKL
Sbjct: 711  RDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDPAINPHALHARLLINQVDRKL 770

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKER  IAD+TE+F ASC+AA+ TLTALGEMF+AAR
Sbjct: 771  VKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMFVASCYAARTTLTALGEMFQAAR 830

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIM+WLG+CAKVI+SENQPVRW TPL LPVVQPYR+LGRHLIKTSLQVLTLQRETDKVM 
Sbjct: 831  SIMNWLGECAKVISSENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMA 890

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTAVACK+AGLNFAGVHDSYWTHACDVDEMNRILREKFV
Sbjct: 891  KRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFV 950

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELYE PILENLLE FQ+SFP+L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 951  ELYEAPILENLLESFQKSFPSLNFPPLPERGDFDLREVLESPYFFN 996


>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
            gi|462422319|gb|EMJ26582.1| hypothetical protein
            PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score =  758 bits (1958), Expect = 0.0
 Identities = 368/406 (90%), Positives = 389/406 (95%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSD+CRGILEF+EGR LGKSGLRWLKIH+ANLYAGGVDKLS+D R AFTENH+D+IFDSA
Sbjct: 601  GSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDEIFDSA 660

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEGRRWWLGAEDPFQCLAACINL EALRS SPETTIS+MPVHQDGSCNGLQHYAALG
Sbjct: 661  DRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHYAALG 720

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLV GDKPADVYSGIAARVL+IM+  AEKDPAT PNAL ARLLINQVDRKL
Sbjct: 721  RDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQVDRKL 780

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTY+GARDQIKRRLKERG IAD+T LF A+C+AA+ TLTALGEMFEAAR
Sbjct: 781  VKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALGEMFEAAR 840

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLG+CAKVIASENQPVRW TPL LPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMV
Sbjct: 841  SIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMV 900

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTAVACK+AGLNFAGVHDSYWTHACD+DEMNRILREKFV
Sbjct: 901  KRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILREKFV 960

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELYE PILENLLEGFQQSFPTLTFPPLP+RGDFDLR+VL+SPYFFN
Sbjct: 961  ELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  751 bits (1938), Expect = 0.0
 Identities = 362/406 (89%), Positives = 389/406 (95%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLG SGL WLKIH+ANL+AGGVDKLS++GR+ FTENHLDDIFDSA
Sbjct: 630  GSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSA 689

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEG+RWWL AEDPFQ LAACINLSEALRSSSPETTISH+PVHQDGSCNGLQHYAALG
Sbjct: 690  DRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALG 749

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RD+LGA AVNLVAG+KPADVYSGIAARVL+IM+R AEKDPA  P+AL+AR+LINQVDRKL
Sbjct: 750  RDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKL 809

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKER  IAD+ ELFGA+C+AAK+TLTALGEMF+AAR
Sbjct: 810  VKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAAR 869

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAK+IASENQPVRWTTPL LPVVQPYRKLGRHLIKTSLQVLTLQRET+ +MV
Sbjct: 870  SIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMV 929

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACDVDEMNR+LREKFV
Sbjct: 930  KRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFV 989

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            +LYETPILENLLE FQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 990  QLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score =  749 bits (1935), Expect = 0.0
 Identities = 359/406 (88%), Positives = 386/406 (95%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEF+EGRPLGKSGLRWLKIH+AN+Y GGVDKLSY+GR AF+ENH++DIFDSA
Sbjct: 588  GSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRAAFSENHVEDIFDSA 647

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEGRRWWLGAEDPFQCLA CIN+SEALRS SPET+ISHMP+HQDGSCNGLQHYAALG
Sbjct: 648  DRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSISHMPIHQDGSCNGLQHYAALG 707

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+R A+KDPAT+PN ++ARLLINQVDRKL
Sbjct: 708  RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKL 767

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKERG I D+ ELF A+C+AAK TLTALGEMFEAAR
Sbjct: 768  VKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFSAACYAAKTTLTALGEMFEAAR 827

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAK+IA ENQPVRWTTPL LPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMV
Sbjct: 828  SIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMV 887

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTA+ CK AGL+FAGVHDSYWTHA DVD+MN+ILREKFV
Sbjct: 888  KRQRTAFPPNFVHSLDGSHMMMTAITCKEAGLSFAGVHDSYWTHASDVDQMNKILREKFV 947

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY+ PILENLLE FQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 948  ELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993


>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223526524|gb|EEF28786.1|
            DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 589

 Score =  749 bits (1934), Expect = 0.0
 Identities = 360/406 (88%), Positives = 390/406 (96%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLGKSGLRWLKIH+ANL+AGGVDKLSYDGR+AFTENHLDDIFDSA
Sbjct: 184  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVDKLSYDGRIAFTENHLDDIFDSA 243

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEG+RWWL AEDPFQCLA CI+L+EALRSSSPET ISH+P+HQDGSCNGLQHYAALG
Sbjct: 244  DRPLEGKRWWLNAEDPFQCLAVCIDLTEALRSSSPETFISHVPIHQDGSCNGLQHYAALG 303

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAG+KPADVYSGIA RVL+IM++ A+KDP   P+AL A++LI+QVDRKL
Sbjct: 304  RDKLGAAAVNLVAGEKPADVYSGIAVRVLDIMRKDAQKDPKVFPDALHAKILISQVDRKL 363

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKERG IAD+TE+F ASC+AAKVTLTALGEMFEAAR
Sbjct: 364  VKQTVMTSVYGVTYIGARDQIKRRLKERGFIADDTEIFVASCYAAKVTLTALGEMFEAAR 423

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLG+CAK+IASEN+PVRWTTPL LPVVQPYR  GRHLIKTSLQVLTLQ+ET+KVMV
Sbjct: 424  SIMSWLGECAKIIASENEPVRWTTPLGLPVVQPYRNFGRHLIKTSLQVLTLQQETEKVMV 483

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTAV CKRAGLNFAGVHDSYWTHACDVD+MNRILREKFV
Sbjct: 484  KRQRTAFPPNFVHSLDGSHMMMTAVTCKRAGLNFAGVHDSYWTHACDVDKMNRILREKFV 543

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELYETP+LENLLE FQQSFPTL+FPPLPERGDFDL++VLKSPYFFN
Sbjct: 544  ELYETPVLENLLESFQQSFPTLSFPPLPERGDFDLQDVLKSPYFFN 589


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            lycopersicum]
          Length = 993

 Score =  746 bits (1925), Expect = 0.0
 Identities = 358/406 (88%), Positives = 386/406 (95%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEF+EGRPLGKSGLRWLKIH+AN+Y GGVDKLS +GR AF+ENH++DIFDSA
Sbjct: 588  GSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSCEGRAAFSENHVEDIFDSA 647

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEGRRWWLGAEDPFQCLA CI++SEALRS SPET+ISHMP+HQDGSCNGLQHYAALG
Sbjct: 648  DRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIHQDGSCNGLQHYAALG 707

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+R A+KDPAT+PN ++ARLLINQVDRKL
Sbjct: 708  RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKL 767

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKERG I D+ ELF A+C+AAK TLTALGEMFEAAR
Sbjct: 768  VKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFAAACYAAKTTLTALGEMFEAAR 827

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAK+IA ENQPVRWTTPL LPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMV
Sbjct: 828  SIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMV 887

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTA+ACK AGL+FAGVHDSYWTHA DVD+MN+ILREKFV
Sbjct: 888  KRQRTAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHASDVDQMNKILREKFV 947

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY+ PILENLLE FQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 948  ELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score =  745 bits (1924), Expect = 0.0
 Identities = 357/406 (87%), Positives = 387/406 (95%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLGKSGL WLKIH+ANLYAGGVDKLSYDGRVAFTENHL++IFDSA
Sbjct: 571  GSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRVAFTENHLEEIFDSA 630

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEG+RWWLGAEDPFQCLA C+NL+EALRSSSPETTISH+PVHQDGSCNGLQHYAALG
Sbjct: 631  DRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALG 690

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGA AVNLVAG+KPADVY+GIA RVLEIM+  A+KDP+ +P+  +ARL+++QVDRKL
Sbjct: 691  RDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDPSIDPDVARARLIVDQVDRKL 750

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTY+GARDQIKRRLKERGVI DE ELFGASC+AAKVTLTALGEMF+AAR
Sbjct: 751  VKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGASCYAAKVTLTALGEMFQAAR 810

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
             IM+WLGDCAKVIA EN+PVRWTTPL LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV
Sbjct: 811  GIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 870

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTAVACKR GLNFAGVHDSYWTHACDVD MN+ILREKFV
Sbjct: 871  KRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFV 930

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY+TPILENLLE F++SFP L FPPLPERGDFD++EVL+SPYFFN
Sbjct: 931  ELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLESPYFFN 976


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score =  744 bits (1921), Expect = 0.0
 Identities = 354/406 (87%), Positives = 391/406 (96%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSD+CRG+LEFA GRPLGKSGLRWLKIH+ANL+AGGVDKLS DGR+AFTE+HLDDIFDSA
Sbjct: 617  GSDICRGVLEFAAGRPLGKSGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSA 676

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            D+PLEGR WWL AEDPFQCLA CINLSEA+RSSSPET ISH+PVHQDGSCNGLQHYAALG
Sbjct: 677  DKPLEGRCWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALG 736

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAG+KPADVYSGIAARVL+IM R A++DPA  P+A++AR+L+NQVDRKL
Sbjct: 737  RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKL 796

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKERG IAD+TELFGA+C+AAKVTLTALGEMFEAAR
Sbjct: 797  VKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAAR 856

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIM+WLG+CAK+IASEN+PVRWTTPL LPVVQPYRK+GRH IKTSLQ+LTLQRET+KVMV
Sbjct: 857  SIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMV 916

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNF+HSLDGSHMMMTAVAC+RAGLNFAGVHDSYWTHACDVD++NRILREKFV
Sbjct: 917  KRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFV 976

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELYETPILE LLEGFQ S+PTL+FPPLPERGDFDLR+V++SPYFFN
Sbjct: 977  ELYETPILEKLLEGFQVSYPTLSFPPLPERGDFDLRDVIESPYFFN 1022


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  744 bits (1921), Expect = 0.0
 Identities = 356/406 (87%), Positives = 385/406 (94%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLG SGLRWLKIH+AN+Y GGVDKLSY+GRVAF+ENHL+DIFDSA
Sbjct: 597  GSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSA 656

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            +RPLEG+RWWLGAEDPFQCLA CIN++EALRS SPET IS+MP+HQDGSCNGLQHYAALG
Sbjct: 657  ERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALG 716

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+R A KDPA +PN ++ARLLINQVDRKL
Sbjct: 717  RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKL 776

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIK+RLKERGVI D+ ELF A+C+AAK TLTALGEMFEAAR
Sbjct: 777  VKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAAR 836

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAK+IA EN PVRWTTPL LPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMV
Sbjct: 837  SIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMV 896

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHACDVD+MN+ILREKFV
Sbjct: 897  KRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFV 956

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY+ PILENLLE FQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 957  ELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  744 bits (1921), Expect = 0.0
 Identities = 356/406 (87%), Positives = 385/406 (94%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLG SGLRWLKIH+AN+Y GGVDKLSY+GRVAF+ENHL+DIFDSA
Sbjct: 597  GSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSA 656

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            +RPLEG+RWWLGAEDPFQCLA CIN++EALRS SPET IS+MP+HQDGSCNGLQHYAALG
Sbjct: 657  ERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALG 716

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+R A KDPA +PN ++ARLLINQVDRKL
Sbjct: 717  RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKL 776

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIK+RLKERGVI D+ ELF A+C+AAK TLTALGEMFEAAR
Sbjct: 777  VKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAAR 836

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAK+IA EN PVRWTTPL LPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMV
Sbjct: 837  SIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMV 896

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHACDVD+MN+ILREKFV
Sbjct: 897  KRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFV 956

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY+ PILENLLE FQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 957  ELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
          Length = 715

 Score =  744 bits (1921), Expect = 0.0
 Identities = 356/406 (87%), Positives = 385/406 (94%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLG SGLRWLKIH+AN+Y GGVDKLSY+GRVAF+ENHL+DIFDSA
Sbjct: 310  GSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSA 369

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            +RPLEG+RWWLGAEDPFQCLA CIN++EALRS SPET IS+MP+HQDGSCNGLQHYAALG
Sbjct: 370  ERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALG 429

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+R A KDPA +PN ++ARLLINQVDRKL
Sbjct: 430  RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKL 489

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIK+RLKERGVI D+ ELF A+C+AAK TLTALGEMFEAAR
Sbjct: 490  VKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAAR 549

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAK+IA EN PVRWTTPL LPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMV
Sbjct: 550  SIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMV 609

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHACDVD+MN+ILREKFV
Sbjct: 610  KRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFV 669

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY+ PILENLLE FQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 670  ELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 715


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  740 bits (1911), Expect = 0.0
 Identities = 355/406 (87%), Positives = 384/406 (94%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLGKSGLRWLKIH+AN+Y GGVDKLSY+GRVAF+ENH++DIFDSA
Sbjct: 597  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSA 656

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            +RPLEG+RWWLGAEDPFQCLA CIN++EALRS SPET IS+MP+HQDGSCNGLQHYAALG
Sbjct: 657  ERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALG 716

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RD LGAAAVNLVAGDKPADVYSGIAARVL+IM+R A KDPA +PN ++ARLLINQVDRKL
Sbjct: 717  RDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKL 776

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKERGVI D+ ELF A+C+AAK TLTALGEMFEAAR
Sbjct: 777  VKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAAR 836

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAK+IA EN PVRWTTPL LPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMV
Sbjct: 837  SIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMV 896

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHA DVD+MN+ILREKFV
Sbjct: 897  KRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFV 956

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY+ PILENLLE FQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 957  ELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris]
          Length = 1002

 Score =  740 bits (1911), Expect = 0.0
 Identities = 355/406 (87%), Positives = 384/406 (94%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLGKSGLRWLKIH+AN+Y GGVDKLSY+GRVAF+ENH++DIFDSA
Sbjct: 597  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSA 656

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            +RPLEG+RWWLGAEDPFQCLA CIN++EALRS SPET IS+MP+HQDGSCNGLQHYAALG
Sbjct: 657  ERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALG 716

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RD LGAAAVNLVAGDKPADVYSGIAARVL+IM+R A KDPA +PN ++ARLLINQVDRKL
Sbjct: 717  RDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKL 776

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKERGVI D+ ELF A+C+AAK TLTALGEMFEAAR
Sbjct: 777  VKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAAR 836

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAK+IA EN PVRWTTPL LPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMV
Sbjct: 837  SIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMV 896

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHA DVD+MN+ILREKFV
Sbjct: 897  KRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFV 956

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY+ PILENLLE FQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 957  ELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor
            gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
            subunit RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  740 bits (1911), Expect = 0.0
 Identities = 355/406 (87%), Positives = 384/406 (94%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRGILEFAEGRPLGKSGLRWLKIH+AN+Y GGVDKLSY+GRVAF+ENH++DIFDSA
Sbjct: 597  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSA 656

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            +RPLEG+RWWLGAEDPFQCLA CIN++EALRS SPET IS+MP+HQDGSCNGLQHYAALG
Sbjct: 657  ERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALG 716

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RD LGAAAVNLVAGDKPADVYSGIAARVL+IM+R A KDPA +PN ++ARLLINQVDRKL
Sbjct: 717  RDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKL 776

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKERGVI D+ ELF A+C+AAK TLTALGEMFEAAR
Sbjct: 777  VKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAAR 836

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIMSWLGDCAK+IA EN PVRWTTPL LPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMV
Sbjct: 837  SIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMV 896

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHA DVD+MN+ILREKFV
Sbjct: 897  KRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFV 956

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY+ PILENLLE FQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 957  ELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus guttatus]
          Length = 1021

 Score =  740 bits (1910), Expect = 0.0
 Identities = 352/406 (86%), Positives = 386/406 (95%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSD+CRGILEF+EG+PLGKSGLRWLKIH+ANL+A GVDKLS++GR+ F ENHLDD+FDSA
Sbjct: 616  GSDICRGILEFSEGKPLGKSGLRWLKIHVANLFANGVDKLSHEGRICFIENHLDDVFDSA 675

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEG+RWWL AEDPFQCLAACINL EALR+ SPETTISH+PVHQDGSCNGLQHYAALG
Sbjct: 676  DRPLEGKRWWLNAEDPFQCLAACINLVEALRNPSPETTISHIPVHQDGSCNGLQHYAALG 735

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAG+KPADVYSGIAARVL+IM+  A+KDP+  P+AL ARLLINQVDRKL
Sbjct: 736  RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKEDAQKDPSVCPDALHARLLINQVDRKL 795

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKER    DET++FGA+C+AAK+TLTALG+MFEAAR
Sbjct: 796  VKQTVMTSVYGVTYIGARDQIKRRLKERDAFGDETQIFGAACYAAKITLTALGQMFEAAR 855

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIM+WLGDCAK+IASEN+PVRWTTPL LPVVQPYRK+GRHLIKTSLQVLTLQRETDKVMV
Sbjct: 856  SIMNWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQRETDKVMV 915

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTA+AC+  GL FAGVHDSYWTHACDVDEM+RILREKFV
Sbjct: 916  KRQRTAFPPNFVHSLDGSHMMMTAIACRNGGLTFAGVHDSYWTHACDVDEMSRILREKFV 975

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELYE PILENLLEGFQQSFPTLTFPPLP+RGDFDLR+VL+SPYFFN
Sbjct: 976  ELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1021


>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Setaria italica]
          Length = 1005

 Score =  739 bits (1908), Expect = 0.0
 Identities = 351/406 (86%), Positives = 389/406 (95%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSDLCRG+LEFAEGRPLG+SGLRWLKIH+ANLYAGGVDKLSY GR+AF ENHL++IFDSA
Sbjct: 600  GSDLCRGVLEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYAGRIAFAENHLEEIFDSA 659

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            DRPLEG+RWWLGAEDPFQCLA C+NL+EALRS SPE TISH+PVHQDGSCNGLQHYAALG
Sbjct: 660  DRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSPSPEATISHIPVHQDGSCNGLQHYAALG 719

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGA AVNLVAG+KPADVYSGIA RV+EIM+R ++KDP+T+P+A +ARL+++QVDRKL
Sbjct: 720  RDKLGAIAVNLVAGEKPADVYSGIATRVVEIMRRDSQKDPSTDPDAARARLILDQVDRKL 779

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTY+GAR+QIKRRLKERGVIAD+ ELFGASC+AAKVTLTALGEMF+AAR
Sbjct: 780  VKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDAELFGASCYAAKVTLTALGEMFQAAR 839

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIM+WLGDCAKVIA EN+PV+WTTPL LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV
Sbjct: 840  SIMNWLGDCAKVIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 899

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLDGSHMMMTAVACKR GLNFAGVHDSYWTHACDVD MN+ILREKFV
Sbjct: 900  KRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFV 959

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELY+TPILENLLE F++SFP L FPPLPERGDFD+++VL+SPYFFN
Sbjct: 960  ELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKDVLESPYFFN 1005


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  739 bits (1908), Expect = 0.0
 Identities = 348/406 (85%), Positives = 392/406 (96%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSD+CRG+LEFAEGRPLG+SGLRWLKIH+ANL+AGGV+KLS +GR+ FTENH+DDIFDS+
Sbjct: 615  GSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSS 674

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            D+PLEGRRWWL AEDPFQCLA CINLSEA+RSSSPET++SH+PVHQDGSCNGLQHYAALG
Sbjct: 675  DKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALG 734

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAAAVNLVAG+KPADVYSGIAARVL+IM+R A++DPA  P+A++AR+L+NQVDRKL
Sbjct: 735  RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKL 794

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKERG IAD++ELFGA+C+AAKVTLTALGEMFEAAR
Sbjct: 795  VKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAAR 854

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
            SIM+WLG+CAK+IASEN+PVRWTTPL LPVVQPYRK+GRHLIKTSLQ+LTLQRET+KVMV
Sbjct: 855  SIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMV 914

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNF+HSLDGSHMMMTAVAC+RAGLNFAGVHDSYWTHACDVD++NRILREKFV
Sbjct: 915  KRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFV 974

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            ELYE PILE LLE FQ S+PTL FPPLPERGDFD+R+VL+SPYFFN
Sbjct: 975  ELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
            gi|462411068|gb|EMJ16117.1| hypothetical protein
            PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  738 bits (1906), Expect = 0.0
 Identities = 354/406 (87%), Positives = 383/406 (94%)
 Frame = -3

Query: 1938 GSDLCRGILEFAEGRPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVAFTENHLDDIFDSA 1759
            GSD+CRGILEF EGRPLGKSGL WLKIH+ANLYAGGVDKLS +GR+AFTENHLDDIFDS 
Sbjct: 619  GSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSV 678

Query: 1758 DRPLEGRRWWLGAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 1579
            D+PLEGRRWWL AEDPFQCLA CINL+EALRSSSPET ISH+PVHQDGSCNGLQHYAALG
Sbjct: 679  DKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALG 738

Query: 1578 RDKLGAAAVNLVAGDKPADVYSGIAARVLEIMQRVAEKDPATEPNALQARLLINQVDRKL 1399
            RDKLGAA+VNLV G+KPADVYSGIA RVLEIM+R A+KDP   P AL+A+LLINQVDRKL
Sbjct: 739  RDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDRKL 798

Query: 1398 VKQTVMTSVYGVTYIGARDQIKRRLKERGVIADETELFGASCFAAKVTLTALGEMFEAAR 1219
            VKQTVMTSVYGVTYIGARDQIKRRLKERG I+D+ E+FG +C+AAK+TLTALGEMFEAAR
Sbjct: 799  VKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEAAR 858

Query: 1218 SIMSWLGDCAKVIASENQPVRWTTPLELPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 1039
             IMSWLG+CAK+IASENQPVRWTTPL LPVVQPYRK GRHLIKTSLQVLTLQRET+KVMV
Sbjct: 859  GIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMV 918

Query: 1038 KRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFV 859
            KRQRTAFPPNFVHSLD SHMMMTA+ACK+AGL+FAGVHDSYWTHACDVDEMN+ILREKFV
Sbjct: 919  KRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMNKILREKFV 978

Query: 858  ELYETPILENLLEGFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 721
            +LYETPILENLLE FQQSFP LTFPPLPERGDFDLR+VL+SPYFFN
Sbjct: 979  QLYETPILENLLESFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024