BLASTX nr result
ID: Sinomenium21_contig00011608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00011608
(408 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316041.2| hypothetical protein POPTR_0010s15510g [Popu... 48 4e-11
ref|XP_006488843.1| PREDICTED: psbB mRNA maturation factor Mbb1,... 55 1e-07
ref|XP_006419386.1| hypothetical protein CICLE_v10004521mg [Citr... 55 1e-07
ref|XP_006419387.1| hypothetical protein CICLE_v10004521mg [Citr... 55 1e-07
ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1,... 50 2e-06
emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera] 50 2e-06
ref|XP_003550649.1| PREDICTED: psbB mRNA maturation factor Mbb1,... 45 2e-06
ref|XP_007154377.1| hypothetical protein PHAVU_003G114100g [Phas... 43 4e-06
>ref|XP_002316041.2| hypothetical protein POPTR_0010s15510g [Populus trichocarpa]
gi|550329874|gb|EEF02212.2| hypothetical protein
POPTR_0010s15510g [Populus trichocarpa]
Length = 662
Score = 48.1 bits (113), Expect(2) = 4e-11
Identities = 25/36 (69%), Positives = 28/36 (77%), Gaps = 3/36 (8%)
Frame = +1
Query: 310 SSSIIDVGISEFAKKMPMFEPERVDSSS---KEKPL 408
S IIDVG+ EFAKKMP+FEPERV SS +EKPL
Sbjct: 119 SLKIIDVGLEEFAKKMPIFEPERVGSSGSGPQEKPL 154
Score = 45.1 bits (105), Expect(2) = 4e-11
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 NPNY-SKLYFSVQIKPIQXXXXXXXXXXXXKEFAPALEEKLIFAESDNEGSNETKEEEVE 178
NPN SKLYF V K KE P L+ K + ES +E V
Sbjct: 25 NPNNNSKLYFKVHTKT------RTTIPCSSKESPPVLDPKPLSLESSRTSELSNRESNVV 78
Query: 179 AISSRDQYLEGLLTVRRPVTDSSEEDRDGSSQTREKDGAEDD*RVLPLL 325
S RD LEG+L VRRP + ED S ++ EK +D+ + L ++
Sbjct: 79 IESKRDS-LEGMLVVRRPEMEVPGED---SGESSEKQSDDDNTKSLKII 123
>ref|XP_006488843.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like
[Citrus sinensis]
Length = 662
Score = 55.5 bits (132), Expect(2) = 1e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1
Query: 298 GRLTSSSIIDVGISEFAKKMPMFEPERVDSSSKEKPL 408
G + SS IID ++EFAKKMPMFEPER++SSS EKPL
Sbjct: 123 GGVNSSGIIDATLNEFAKKMPMFEPERMESSSGEKPL 159
Score = 25.8 bits (55), Expect(2) = 1e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 134 SDNEGSNETKEEEVEAISSRDQYLEGLLTVRRPVTDSSEED 256
S N + K +V D + + L VRRPV + S+E+
Sbjct: 71 SHNTKTEAVKNADVGIEEKEDSFNKDRLVVRRPVKELSDEE 111
>ref|XP_006419386.1| hypothetical protein CICLE_v10004521mg [Citrus clementina]
gi|557521259|gb|ESR32626.1| hypothetical protein
CICLE_v10004521mg [Citrus clementina]
Length = 648
Score = 55.5 bits (132), Expect(2) = 1e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1
Query: 298 GRLTSSSIIDVGISEFAKKMPMFEPERVDSSSKEKPL 408
G + SS IID ++EFAKKMPMFEPER++SSS EKPL
Sbjct: 109 GGVNSSGIIDATLNEFAKKMPMFEPERMESSSGEKPL 145
Score = 25.8 bits (55), Expect(2) = 1e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 134 SDNEGSNETKEEEVEAISSRDQYLEGLLTVRRPVTDSSEED 256
S N + K +V D + + L VRRPV + S+E+
Sbjct: 57 SHNTKTEAVKNADVGIEEKEDSFNKDRLVVRRPVKELSDEE 97
>ref|XP_006419387.1| hypothetical protein CICLE_v10004521mg [Citrus clementina]
gi|557521260|gb|ESR32627.1| hypothetical protein
CICLE_v10004521mg [Citrus clementina]
Length = 569
Score = 55.5 bits (132), Expect(2) = 1e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1
Query: 298 GRLTSSSIIDVGISEFAKKMPMFEPERVDSSSKEKPL 408
G + SS IID ++EFAKKMPMFEPER++SSS EKPL
Sbjct: 109 GGVNSSGIIDATLNEFAKKMPMFEPERMESSSGEKPL 145
Score = 25.8 bits (55), Expect(2) = 1e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 134 SDNEGSNETKEEEVEAISSRDQYLEGLLTVRRPVTDSSEED 256
S N + K +V D + + L VRRPV + S+E+
Sbjct: 57 SHNTKTEAVKNADVGIEEKEDSFNKDRLVVRRPVKELSDEE 97
>ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic [Vitis
vinifera] gi|296083248|emb|CBI22884.3| unnamed protein
product [Vitis vinifera]
Length = 651
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = +1
Query: 310 SSSIIDVGISEFAKKMPMFEPERVDSSSKEKPL 408
SSS ID G++EFAKK+PMFEP+R + SS+E+PL
Sbjct: 109 SSSPIDAGLAEFAKKLPMFEPQRAELSSEERPL 141
Score = 26.9 bits (58), Expect(2) = 2e-06
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 2 NPNYSKLYFSVQIKPIQXXXXXXXXXXXXKE--FAPALEEKLIFAESDNEGSNETKEEEV 175
NP+ SK F V I P+ + +P LE+K S GS EV
Sbjct: 24 NPSSSKFSFKVPIVPLHSSLSPLTLPPCASKDSSSPLLEQK---PHSSGFGSEPQSPPEV 80
Query: 176 EAISSRDQYLEGLLTVRRPVTDSSEEDRDGSS 271
LTVRRP+ + S +D + S+
Sbjct: 81 -------------LTVRRPMKEYSGDDDESSN 99
>emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]
Length = 629
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = +1
Query: 310 SSSIIDVGISEFAKKMPMFEPERVDSSSKEKPL 408
SSS ID G++EFAKK+PMFEP+R + SS+E+PL
Sbjct: 109 SSSPIDAGLAEFAKKLPMFEPQRAELSSEERPL 141
Score = 26.9 bits (58), Expect(2) = 2e-06
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 2 NPNYSKLYFSVQIKPIQXXXXXXXXXXXXKE--FAPALEEKLIFAESDNEGSNETKEEEV 175
NP+ SK F V I P+ + +P LE+K S GS EV
Sbjct: 24 NPSSSKFSFKVPIVPLHSSLSPLTLPPCASKDSSSPLLEQK---PHSSGFGSEPQSPPEV 80
Query: 176 EAISSRDQYLEGLLTVRRPVTDSSEEDRDGSS 271
LTVRRP+ + S +D + S+
Sbjct: 81 -------------LTVRRPMKEYSGDDDESSN 99
>ref|XP_003550649.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like
[Glycine max]
Length = 647
Score = 45.4 bits (106), Expect(2) = 2e-06
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +1
Query: 313 SSIIDVGISEFAKKMPMFEPERVDSSSKEKPL 408
+S ID G++ FAKKMPMFEPERV+ SKE+PL
Sbjct: 115 ASAIDEGLARFAKKMPMFEPERVE--SKERPL 144
Score = 31.6 bits (70), Expect(2) = 2e-06
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 179 AISSRDQYLEGLLTVRRPVTDSSEEDRDGSSQTREKDGAEDD 304
A+S D E L +RRPVTD S E G + EK+ E++
Sbjct: 70 AVSPDDSSFEEALVIRRPVTDFSAE-YSGEEEEEEKETKEEE 110
>ref|XP_007154377.1| hypothetical protein PHAVU_003G114100g [Phaseolus vulgaris]
gi|561027731|gb|ESW26371.1| hypothetical protein
PHAVU_003G114100g [Phaseolus vulgaris]
Length = 644
Score = 42.7 bits (99), Expect(2) = 4e-06
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +1
Query: 313 SSIIDVGISEFAKKMPMFEPERVDSSSKEKPL 408
+S ID G++ FAKKMPMFEP R++ SKE+PL
Sbjct: 108 ASAIDAGLARFAKKMPMFEPARME--SKERPL 137
Score = 33.5 bits (75), Expect(2) = 4e-06
Identities = 23/95 (24%), Positives = 36/95 (37%)
Frame = +2
Query: 8 NYSKLYFSVQIKPIQXXXXXXXXXXXXKEFAPALEEKLIFAESDNEGSNETKEEEVEAIS 187
N KL V I P+ + L++ + +E ++ A+S
Sbjct: 20 NIFKLTHKVPILPLHSHAPCCSLSDSSSSYTTVLDKSALSSEQNSSN----------AVS 69
Query: 188 SRDQYLEGLLTVRRPVTDSSEEDRDGSSQTREKDG 292
D E +L VRRPVTD S ++ + E G
Sbjct: 70 PEDSGSEEVLVVRRPVTDFSSQEEEEEENEAENGG 104