BLASTX nr result

ID: Sinomenium21_contig00011551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00011551
         (460 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS11051.1| reverse transcriptase [Malus domestica]                 35   6e-06

>gb|ABS11051.1| reverse transcriptase [Malus domestica]
          Length = 88

 Score = 35.4 bits (80), Expect(3) = 6e-06
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = -2

Query: 195 WFANLRSMLQKNGLQRSNVNASLFVKRGA 109
           W+A L S+L   G +RSN ++SLFV+ GA
Sbjct: 46  WYAKLSSVLHSVGFKRSNADSSLFVRTGA 74



 Score = 30.0 bits (66), Expect(3) = 6e-06
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -3

Query: 275 GHP*ESFFGVVCKLNKAIYGLK 210
           GHP      +VCKL+K+IYGLK
Sbjct: 19  GHPQSQEPNLVCKLHKSIYGLK 40



 Score = 29.6 bits (65), Expect(3) = 6e-06
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 319 LHGDLTEEVYMSLP 278
           LHGDL EEVYM+LP
Sbjct: 4   LHGDLEEEVYMTLP 17


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