BLASTX nr result

ID: Sinomenium21_contig00011115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00011115
         (606 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273185.1| PREDICTED: UPF0496 protein 4 [Vitis vinifera]      88   2e-15
emb|CAN78200.1| hypothetical protein VITISV_016086 [Vitis vinifera]    88   2e-15
ref|XP_002315065.1| hypothetical protein POPTR_0010s17810g [Popu...    81   2e-13
ref|XP_007222572.1| hypothetical protein PRUPE_ppa008417mg [Prun...    79   8e-13
gb|ABK94071.1| unknown [Populus trichocarpa]                           75   1e-11
ref|XP_002311299.2| hypothetical protein POPTR_0008s08520g [Popu...    72   9e-11
ref|XP_004298618.1| PREDICTED: UPF0496 protein 4-like [Fragaria ...    59   1e-06
ref|XP_004173410.1| PREDICTED: protein BPS1, chloroplastic-like ...    57   5e-06
ref|XP_004138476.1| PREDICTED: protein BPS1, chloroplastic-like ...    57   5e-06

>ref|XP_002273185.1| PREDICTED: UPF0496 protein 4 [Vitis vinifera]
          Length = 337

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 55/127 (43%), Positives = 67/127 (52%)
 Frame = +3

Query: 219 FPSFFPFGLSGKQAPAKNLDLVTRGFDEALLHRLKNLGSATKNPSMFSLSWLCLAVDLLS 398
           F +F PF  S   +   N +L++  FD+AL+ RLK L     NP   +LSWL LAVD LS
Sbjct: 9   FSAFSPFSGSRNCSLPNNFELLSCSFDDALIRRLKAL-----NPPSLTLSWLSLAVDFLS 63

Query: 399 STHADAEKIIXXXXXXXXXXXXXXXXXXXXXXXXXXACNSIISEIERLRHSRLLIQFVLH 578
           + HA+   +I                           CNSI SEIERLR  RLLI FV+H
Sbjct: 64  TIHAEVRSLISNLKPSASDDSLACFLDDSVKLLD--VCNSISSEIERLRQRRLLINFVIH 121

Query: 579 LLDFSGE 599
           LLDFSGE
Sbjct: 122 LLDFSGE 128


>emb|CAN78200.1| hypothetical protein VITISV_016086 [Vitis vinifera]
          Length = 542

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 55/127 (43%), Positives = 67/127 (52%)
 Frame = +3

Query: 219 FPSFFPFGLSGKQAPAKNLDLVTRGFDEALLHRLKNLGSATKNPSMFSLSWLCLAVDLLS 398
           F +F PF  S   +   N +L++  FD+AL+ RLK L     NP   +LSWL LAVD LS
Sbjct: 9   FSAFSPFSGSRNCSLPNNFELLSCSFDDALIRRLKAL-----NPPSLTLSWLSLAVDFLS 63

Query: 399 STHADAEKIIXXXXXXXXXXXXXXXXXXXXXXXXXXACNSIISEIERLRHSRLLIQFVLH 578
           + HA+   +I                           CNSI SEIERLR  RLLI FV+H
Sbjct: 64  TIHAEVRSLISNLKPSASDDSLACFLDDSVKLLD--VCNSISSEIERLRQRRLLINFVIH 121

Query: 579 LLDFSGE 599
           LLDFSGE
Sbjct: 122 LLDFSGE 128


>ref|XP_002315065.1| hypothetical protein POPTR_0010s17810g [Populus trichocarpa]
           gi|118486705|gb|ABK95189.1| unknown [Populus
           trichocarpa] gi|222864105|gb|EEF01236.1| hypothetical
           protein POPTR_0010s17810g [Populus trichocarpa]
          Length = 363

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 56/145 (38%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
 Frame = +3

Query: 195 MYLTDEVLFPSFF-PFGLSGKQ----APAKNLDLVTRGFDEALLHRLKNL--GSATKNPS 353
           M+LT+  +FPSFF PF  + K+    A     DL +  FDE+LL RLK L   S++  PS
Sbjct: 1   MFLTETSIFPSFFDPFNNTKKKNKKDAAHMKFDLFSHSFDESLLRRLKTLTNSSSSSPPS 60

Query: 354 M-FSLSWLCLAVDLLSSTHADAEKIIXXXXXXXXXXXXXXXXXXXXXXXXXXACNSIISE 530
           +  +LSWL  A+D LS TH +A  ++                           CNSI SE
Sbjct: 61  VAINLSWLSSALDFLSYTHNEAINLLSSLKLDNSLDFYLDNSVRLLDL-----CNSISSE 115

Query: 531 IERLRHSRLLIQFVLHLLDFSGEDR 605
           IER RH RL++ F LH+L+   ED+
Sbjct: 116 IERFRHRRLVLSFALHVLNNGSEDQ 140


>ref|XP_007222572.1| hypothetical protein PRUPE_ppa008417mg [Prunus persica]
           gi|462419508|gb|EMJ23771.1| hypothetical protein
           PRUPE_ppa008417mg [Prunus persica]
          Length = 333

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 51/130 (39%), Positives = 66/130 (50%)
 Frame = +3

Query: 195 MYLTDEVLFPSFFPFGLSGKQAPAKNLDLVTRGFDEALLHRLKNLGSATKNPSMFSLSWL 374
           MY T+   F SF PF ++ K +   NLDL++R FD+ALL RLK L      P   SLSWL
Sbjct: 1   MYRTEISNFSSFSPFRVAKKHSVPNNLDLISRSFDDALLCRLKTL-----TPPSISLSWL 55

Query: 375 CLAVDLLSSTHADAEKIIXXXXXXXXXXXXXXXXXXXXXXXXXXACNSIISEIERLRHSR 554
             AVD L+   ++A  +I                           CNS+ ++IER R  R
Sbjct: 56  SKAVDFLALAQSEARVLI--SNLKVAALDDSLAWYLDDSVKLLDLCNSVSADIERFRQRR 113

Query: 555 LLIQFVLHLL 584
           LL+ FVLHLL
Sbjct: 114 LLLTFVLHLL 123


>gb|ABK94071.1| unknown [Populus trichocarpa]
          Length = 335

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 47/131 (35%), Positives = 69/131 (52%)
 Frame = +3

Query: 195 MYLTDEVLFPSFFPFGLSGKQAPAKNLDLVTRGFDEALLHRLKNLGSATKNPSMFSLSWL 374
           M+LT++  +PSFF      K+   K  DL+++ FDE++L RL  L ++  + ++ +LSWL
Sbjct: 1   MFLTEKPNYPSFFDSFNKEKKKKKKEFDLISQSFDESILRRLNTLCNSHSSVTI-NLSWL 59

Query: 375 CLAVDLLSSTHADAEKIIXXXXXXXXXXXXXXXXXXXXXXXXXXACNSIISEIERLRHSR 554
             A+  LS TH  A  ++                           CNSI SEIERLRH R
Sbjct: 60  SSALAFLSFTHNQAITLLSNPKLTDSLSFYLDDSVKLLDI-----CNSIASEIERLRHRR 114

Query: 555 LLIQFVLHLLD 587
           LL++F LHL +
Sbjct: 115 LLLKFALHLFN 125


>ref|XP_002311299.2| hypothetical protein POPTR_0008s08520g [Populus trichocarpa]
           gi|550332671|gb|EEE88666.2| hypothetical protein
           POPTR_0008s08520g [Populus trichocarpa]
          Length = 334

 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 46/131 (35%), Positives = 70/131 (53%)
 Frame = +3

Query: 195 MYLTDEVLFPSFFPFGLSGKQAPAKNLDLVTRGFDEALLHRLKNLGSATKNPSMFSLSWL 374
           M+LT++  +PSFF    + ++   K  DL+++ FDE++L RL  L ++  + ++ +LSWL
Sbjct: 1   MFLTEKPNYPSFFD-SFNKEKKKKKEFDLISQSFDESILRRLNTLCNSHSSVTI-NLSWL 58

Query: 375 CLAVDLLSSTHADAEKIIXXXXXXXXXXXXXXXXXXXXXXXXXXACNSIISEIERLRHSR 554
             A+  LS TH  A  ++                           CNSI SEIERLRH R
Sbjct: 59  SSALAFLSFTHNQAITLLSNPKLTDSLNFYLDDSVKLLDI-----CNSIASEIERLRHRR 113

Query: 555 LLIQFVLHLLD 587
           LL++F LHL +
Sbjct: 114 LLLKFALHLFN 124


>ref|XP_004298618.1| PREDICTED: UPF0496 protein 4-like [Fragaria vesca subsp. vesca]
          Length = 316

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 40/113 (35%), Positives = 55/113 (48%)
 Frame = +3

Query: 246 SGKQAPAKNLDLVTRGFDEALLHRLKNLGSATKNPSMFSLSWLCLAVDLLSSTHADAEKI 425
           S K +    LDL+T  FD+ALL  LK L +    PS+ SL WL  AV+ L+  HA+A ++
Sbjct: 8   SFKHSLPNKLDLITAAFDDALLRSLKTLSA----PSI-SLCWLSKAVEFLAVAHAEARRL 62

Query: 426 IXXXXXXXXXXXXXXXXXXXXXXXXXXACNSIISEIERLRHSRLLIQFVLHLL 584
           I                           CNS+ +EIERLR  R+ +   +HLL
Sbjct: 63  IFSSLEVTVLDDALASYLDDSVKLLDI-CNSVSAEIERLRQRRIFLALAVHLL 114


>ref|XP_004173410.1| PREDICTED: protein BPS1, chloroplastic-like isoform 1 [Cucumis
           sativus] gi|449532891|ref|XP_004173411.1| PREDICTED:
           protein BPS1, chloroplastic-like isoform 2 [Cucumis
           sativus]
          Length = 334

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
 Frame = +3

Query: 228 FFPFGL-------SGKQAPAKNLDLVTRGFDEALLHRLKNLGSATKNPSMFSLSWLCLAV 386
           FFPFG         G   P+K +D++   F+ +L  RL+ L  + ++  + SLSW+ LA+
Sbjct: 12  FFPFGNPFRMRSPKGSNLPSKLVDILN-AFERSLAERLQKLHPSGED-DVLSLSWMILAM 69

Query: 387 DLLSSTHADAEKII-XXXXXXXXXXXXXXXXXXXXXXXXXXACNSIISEIERLRHSRLLI 563
           +LL  TH+D + +I                            CN++ SE+  L  S L++
Sbjct: 70  ELLCETHSDVKNLIKELDLPVPDWNEKLIDVYLDISVKLLDVCNALSSELSHLNQSNLML 129

Query: 564 QFVLHLLDFSGEDR 605
           + V+H LD +  +R
Sbjct: 130 RCVIHNLDSADSER 143


>ref|XP_004138476.1| PREDICTED: protein BPS1, chloroplastic-like isoform 1 [Cucumis
           sativus] gi|449441414|ref|XP_004138477.1| PREDICTED:
           protein BPS1, chloroplastic-like isoform 2 [Cucumis
           sativus]
          Length = 334

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
 Frame = +3

Query: 228 FFPFGL-------SGKQAPAKNLDLVTRGFDEALLHRLKNLGSATKNPSMFSLSWLCLAV 386
           FFPFG         G   P+K +D++   F+ +L  RL+ L  + ++  + SLSW+ LA+
Sbjct: 12  FFPFGNPFRMRSPKGSNLPSKLVDILN-AFERSLAERLQKLHPSGED-DVLSLSWMILAM 69

Query: 387 DLLSSTHADAEKII-XXXXXXXXXXXXXXXXXXXXXXXXXXACNSIISEIERLRHSRLLI 563
           +LL  TH+D + +I                            CN++ SE+  L  S L++
Sbjct: 70  ELLCETHSDVKNLIKELDLPVPDWNEKLIDVYLDISVKLLDVCNALSSELSHLNQSNLML 129

Query: 564 QFVLHLLDFSGEDR 605
           + V+H LD +  +R
Sbjct: 130 RCVIHNLDSADSER 143


Top