BLASTX nr result

ID: Sinomenium21_contig00010887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00010887
         (686 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308543.1| conserved oligomeric Golgi complex component...    67   7e-09
ref|XP_006453061.1| hypothetical protein CICLE_v10007867mg [Citr...    64   4e-08
ref|XP_006474432.1| PREDICTED: conserved oligomeric Golgi comple...    60   5e-07
ref|XP_002516094.1| Conserved oligomeric Golgi complex component...    60   9e-07
gb|EXB57652.1| hypothetical protein L484_002999 [Morus notabilis]      57   6e-06

>ref|XP_002308543.1| conserved oligomeric Golgi complex component-related family protein
           [Populus trichocarpa] gi|222854519|gb|EEE92066.1|
           conserved oligomeric Golgi complex component-related
           family protein [Populus trichocarpa]
          Length = 575

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 40/82 (48%), Positives = 51/82 (62%)
 Frame = +3

Query: 3   LISDSKSLFDGVSKLLADSLARELPKPVATSEGKHITENGRDSAVVGNGIHPDGEQMGVP 182
           LI D+K+L+DGV +LLA S +REL +P   +EGK ITENG D  VV NG+ P+ E  GV 
Sbjct: 493 LIMDAKNLYDGVGRLLATS-SRELQRPANNTEGKKITENG-DQLVVENGVTPEVEPSGVA 550

Query: 183 SADGSLPIASTEPTSVKQEDPI 248
            AD    I+ T     KQ D +
Sbjct: 551 IADEKDQISPTVQIDEKQGDSV 572


>ref|XP_006453061.1| hypothetical protein CICLE_v10007867mg [Citrus clementina]
           gi|557556287|gb|ESR66301.1| hypothetical protein
           CICLE_v10007867mg [Citrus clementina]
          Length = 568

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 35/72 (48%), Positives = 47/72 (65%)
 Frame = +3

Query: 3   LISDSKSLFDGVSKLLADSLARELPKPVATSEGKHITENGRDSAVVGNGIHPDGEQMGVP 182
           LI D+KSL+DG+ +LL  S +RELPKPV  ++GK ITENG D  VV NG++P  E+    
Sbjct: 493 LIMDAKSLYDGLGRLLTHSPSRELPKPVNDADGKTITENG-DLPVVENGVNPAAEETEGT 551

Query: 183 SADGSLPIASTE 218
           + D    +  TE
Sbjct: 552 NEDEKEQLLQTE 563


>ref|XP_006474432.1| PREDICTED: conserved oligomeric Golgi complex subunit 8-like
           [Citrus sinensis] gi|343887270|dbj|BAK61816.1| conserved
           oligomeric Golgi complex component [Citrus unshiu]
          Length = 568

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 31/56 (55%), Positives = 41/56 (73%)
 Frame = +3

Query: 3   LISDSKSLFDGVSKLLADSLARELPKPVATSEGKHITENGRDSAVVGNGIHPDGEQ 170
           LI D+KSL+DG+ +L   S +RELPKPV  ++GK ITENG D  VV NG++P  E+
Sbjct: 493 LIMDAKSLYDGLGRLSTHSPSRELPKPVNDADGKTITENG-DLPVVENGVNPAAEE 547


>ref|XP_002516094.1| Conserved oligomeric Golgi complex component, putative [Ricinus
           communis] gi|223544580|gb|EEF46096.1| Conserved
           oligomeric Golgi complex component, putative [Ricinus
           communis]
          Length = 574

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
 Frame = +3

Query: 3   LISDSKSLFDGVSKLLADSLARELPKPVATSEGKHITENGRDSAVVGNGIHPDGEQ---M 173
           LI D+K+L+DG+S+LLA S +RELP+PV   E K ITENG +  VV N +  D EQ    
Sbjct: 491 LIMDAKNLYDGISRLLATSPSRELPRPVNNPEEKSITENG-NLPVVENEVSTDVEQPQPQ 549

Query: 174 GVPSA-DGSLPIASTEPTSVKQED 242
           G+ +A D     + T PT  KQ D
Sbjct: 550 GMNAATDEKEQKSPTIPTDEKQPD 573


>gb|EXB57652.1| hypothetical protein L484_002999 [Morus notabilis]
          Length = 570

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 37/80 (46%), Positives = 46/80 (57%)
 Frame = +3

Query: 3   LISDSKSLFDGVSKLLADSLARELPKPVATSEGKHITENGRDSAVVGNGIHPDGEQMGVP 182
           LI D+K+L+DGVS+LL  S +REL KPV+  EGK ITENG +     NG     EQ G  
Sbjct: 492 LIMDAKNLYDGVSRLLTVSSSRELRKPVSNEEGKGITENG-EVPSAENGF-TSVEQTGDA 549

Query: 183 SADGSLPIASTEPTSVKQED 242
           +AD      S  P+  K  D
Sbjct: 550 NADEREQKNSASPSDEKSSD 569


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