BLASTX nr result

ID: Sinomenium21_contig00010787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00010787
         (338 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18961.3| unnamed protein product [Vitis vinifera]               62   1e-07
ref|XP_002284626.1| PREDICTED: uncharacterized protein LOC100262...    62   1e-07
ref|XP_002302217.2| zinc finger family protein [Populus trichoca...    56   6e-06

>emb|CBI18961.3| unnamed protein product [Vitis vinifera]
          Length = 2149

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
 Frame = -2

Query: 334 SPVELDVSFKSNALVAKAVTNPSSSSV--GRDWCSTP-NAKKRKVFLPIFGLSSLQLSEI 164
           SPVELDVSFKSN+LVAKA+  PSS +V   R+ C  P N + RK+ LP    SS QL+++
Sbjct: 437 SPVELDVSFKSNSLVAKAIMAPSSPTVVSDRNLCLIPRNRELRKITLPNMDNSSSQLNKL 496

Query: 163 HGGHVSGD--NSTHCIKSNLDRGVTPLKEKVVVARISAMDAAVSKPGLNTMNL 11
           +   V  D   S     S   +    LKEKV  + +  +    SKP  +  N+
Sbjct: 497 NEEPVKRDCLPSVVADPSLCHKDPKQLKEKVTASGLETVQTFSSKPCSSGTNI 549


>ref|XP_002284626.1| PREDICTED: uncharacterized protein LOC100262507 [Vitis vinifera]
          Length = 2260

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
 Frame = -2

Query: 334 SPVELDVSFKSNALVAKAVTNPSSSSV--GRDWCSTP-NAKKRKVFLPIFGLSSLQLSEI 164
           SPVELDVSFKSN+LVAKA+  PSS +V   R+ C  P N + RK+ LP    SS QL+++
Sbjct: 404 SPVELDVSFKSNSLVAKAIMAPSSPTVVSDRNLCLIPRNRELRKITLPNMDNSSSQLNKL 463

Query: 163 HGGHVSGD--NSTHCIKSNLDRGVTPLKEKVVVARISAMDAAVSKPGLNTMNL 11
           +   V  D   S     S   +    LKEKV  + +  +    SKP  +  N+
Sbjct: 464 NEEPVKRDCLPSVVADPSLCHKDPKQLKEKVTASGLETVQTFSSKPCSSGTNI 516


>ref|XP_002302217.2| zinc finger family protein [Populus trichocarpa]
           gi|550344506|gb|EEE81490.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 2120

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
 Frame = -2

Query: 334 SPVELDVSFKSNALVAKAVTNPSSSSVG-RDWCSTP-NAKKRKVFLPIFGLSSLQLSEIH 161
           SPVELDVSFKSN+LVAKA+  PSS++VG  +   TP N+K RKV +P     S+  S   
Sbjct: 372 SPVELDVSFKSNSLVAKAILTPSSTTVGASETILTPRNSKVRKVLVPAKDKDSINSSMNK 431

Query: 160 GGHVS---GDNSTHCIK-SNLDRGVTPLKEKVVVARISAMDAAVSKPGLNTMNL 11
              V+   G  ++   K S+ D+ +   +E V+ + I+ +  + S P  N + +
Sbjct: 432 PSKVAVEVGKGASVASKASSSDKDLKKSREGVIASGITNVRDSSSMPLKNRVEM 485


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